RiboLife
RiboLife is a collection of sequence alignments for ribosomal rRNA. Currently there are two versions each for the LSU and SSU.
RiboZones Alignment
Version 1.0
Version 1.0 of the LSU RiboZones alignment has been released in PNAS (2014).
Petrov, AS, et al. (2014) Evolution of the ribosome at atomic resolution. PNAS 2014(111):10251-10256. [Citation Manager]
You can download it here.
Version 1.0 of the SSU RiboZones alignment has been released in (publication pending, 2015).
You can download it here.Version 2.0
Version 2.0 of these RiboZones alignments are (publication pending, 2018).
The alignment contains 133 sequences with broad phylogenetic representation from each domain of life (Bacteria, Archaea, Eukarya). The 23-28S rRNA sequences in RiboZones are full-length, aligned according to secondary and tertiary structure, and contain a single entry per species.