>Acinetobacter_sp.
----------------AGUGCAUGU-GGUGGAUG-CCUUGGC-AGUCAG---AGGCGAUG
AAAGACGUGA-UAGCCUGCGAAAAGCUCCGGGGAGGCGGCAAAUAUCCU----UUGAUC-
CGG-AGAUGUCUGAAUGGGGGAACCC---AC----CUACU------------UUAA----
----------G----G----U---AGGU-A-UUGC-AAC---AUGA--------------
------AUACA--------------------------UA-GUG-UUG-C-AA-GGCGAAC
GAGGGGAAGUGAAACAUCUCAGUACCCU--UAGGAAAAGAAAUCAA-UUGAGAUUCCCUC
AGU-AG-CGGCGAGCGAACGGGGA-U-CA-GCCCA-------------------------
----------------------------------------------UUA------A----
G-----------------------UUAUG-----------UG---U-------GUUUU-A
GUGG------AAC-GC-UCUG---------------------------------------
----GGAAG-UGCGA-------ACGUAGAGGGUGAUAUUCCCGUA---------CACGAA
A--GGGC------A--CACAU-----------AA----------UGAU----GACGAGUA
GGGCGAGGCACGUGAAACCUUGUCUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUGACUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCUGUGAGGGG-A-GUGAAAUAGAUCCUGAAACCGCAUGCAUACAA-GCAGU-GGG
A---GCAC-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UUCGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAU
-A-UUCAGUAGCGA-GGUUAACC----------GUAUA----------GGGGA--GCCGU
AGAGAAAU-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAUA-------------------------GG-G-CGU
----------------------UUAGUUGCUGGGUAUA-GACCCGAAACC-AGGCGAUCU
AUCCAUGAGCAGGUUGAAGGUUGGGUAACA-CUAACUGGAGGACCGA--ACCCACUG-UC
GUUGAAAAGCCAGGGGAUGACUUGUGGAUAGGGGUGAAAGGCUAAUCAAGCCUGG-UGAU
AGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGG-ACG-----------------
------------------------------------------------------------
-AAUA-CCAUAGGGGGUAGAGC-ACUGUUUCGG-CUA--GGGGGUC---AUCCC--GACU
UACCAAACCGAUGCAAACUCCGAAUACCUAU-----------------------------
------------------------------------------------------------
----------------------GAGU-A-CU------AUCCGGG-AGACAGA-C-UGCG-
G-GUGCUAACGUCCGU-AGUCAAGAG-GAAAAC---AAUCCAGACCGCCAGCUAAGGCCC
CAAAAU--CA-UAG-UU-AA---GU-GGG-------AAACGAUGUGGGAAGGCAUAGACA
GCUAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUAGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCUAA-AACUAUG----------UG
CCGAA-GCUGCGGAUUUGACAU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------UAGUCA
AG-UGGUAGGGGAGC-GUUCUGU-AAG-CCGAU-GAAGGUG--U-AUUGAGAAGU--A-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACGU-GAGUA-ACGACA--AAAC-GGGUG
A--A---------------AAACCC-GUU-CGCCGA-AAGACC-AAGGGUUCC-AGUCCA
ACGUUAAUCGGGGCUGGGUGAGUCGAC-CC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AAUUGGUU
-AAUA-UUCCAAUACUUCU----GUGU------AAU------------------------
------------------------------------------------------------
------------------------------------GCGAUGAGAGGACGGAGAA-GGUU
AA-GUCAGCCUG-GC-G----UUGGU----UGUCCAGGU-GGAAGG-AUGUA-----G-G
-----UA-----UG------------------UA-UCU-UAGG-----------------
---CAAAU-CCGGGGUACU--CU-AUACUG----AGAUC-C-G-AUA--GC---------
------------------------------------------------------AA----
GCUGUACUUGUACAGCGAAG-UGGC-U-GAUACCAUGCUUC-C-AGGAAA-AGUCUCUAA
GCUU--------------------------------------------------CAGUUA
C-ACAGGAAUCGUACCCGAAACCGACACAGGUG-GUCAGGUC-GAGUAGACCAAGGC-G-
CUUGAG-AGAACUCUG-CUGAAGGAACUAGGC-AAAAUGGUACCGUAACUUCGG-GAGAA
GGUACG-CUGU-U-GU--UGGUGAUGGAA----------CUUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------UUCC-UGA--GCUGAUGAC--AGCCGC
AGAAACCAGGCCGCUGCAA-----CUGUUUAUUAAAAACAUAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-UGCCUGCCCGGUGCUG-G-A
AGGUUAAUUGAUGGGGUUA-GC-----GUAA-----GCGAAGCUCUUGAUCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCAUAAUGAUG--GCGGCGCUGUCUCCAGC----AGA-GG
CUCAGUGAAAUCGAAAUCGCUGUGAAGAUGCAGUGUACCCGCGGCUAGACGGAAAGA-CC
CCGUGAACC-UUUACUGCAGCUUGACACUGAACUUUGACCUUACUUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGUUGG-AAC----------------------------GCUA---
----------------------------------GU-UCCAAUGGA--GCCGU-CCUUGA
AAUA-CCACC-CUGGUAAUGUUGAGGUUCUAACUCUGU--CCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------ACGAGGACC-GUGUCUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCUA-AAGAGUAAC-GGAGGAGUACGAAGGUGCGCU
CAGCGUGGUCGGAAAUCACGCGUA-GAGUA-UAAAGGCAA-AAGCGCGCUUAACU-GCGA
----------------------------------GACCCA---CAAGUCGAGCAGGUACG
AAA-GUAGGUCUUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCUGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCUC
AUCCUGGGGCUGAAGCAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGAGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUACC-----------------
---G-UGG--------------------------------------GCGC-UGGAAAUUU
GAGAGG-AUC-UGCUCCUAGUACGAGAGGAC-CAGAGUGGACGAACCUC-UGGUG-UACC
GGUUGUGACGCCAGUCGCAU-C-GCCGGGUAGCUAUGUUCGGAAGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCUACCUCAA-G-AUAAGAUUUCC-CU---AGGAA------
-------------UUU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------------AUUC
CUCU--AA-AGA----GCCGUUCGAGACUAGGACGU-UGAUAGGUU-GGAUGUGGAAG-C
AU-A----------------GU----------GA-----------UAUGUGAAGCUG--A
CCAAUACUAAUU--GCUCGUGAG-GCUUGACU--
>Agrobacterium_tumefaciens
A--AGAAGUGAA-UUAAGGGCAUUU-GGUGGAUG-CCUUGGC-AUGCAC---AGGCGAAG
AAGGACGUGA-UACGCUGCGAAAAGCCGUGGGGAGCUGCGAAUAAGCUU-----UGAUC-
CAU-GGAUCUCCGAAUGGGGCAACCC---AC----CUUAA-AUGCUUGGGAA-AUCUUUC
CAAGCAU---UGUGAU----A---AGGU-A-UCUU-ACUU--UCGA--------------
------AUACA--------------------------UA-GGG-GUA-A-GA-AGCGAAC
GCAGGGAACUGAAACAUCUAAGUACCUG--CAGGAAAGGACAUCAA-CCGAGACUCCGCA
AGU-AG-UGGCGAGCGAACGCGGA-C-CA-GGCCA-------------------------
----------------------------------------------GUG------G----
------------------------CAAUG-----------AU---G-------AAUAA-A
GCGG------AAC-GA-UUUG---------------------------------------
----GAAAA-GUCGG-------CCAUAGAGGGUGAUAGCCCCUUA---------CGCGUA
G--AACA------G--UCAU------------------------UGUC----CUUGAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-CAUGGGGAG-ACC--ACUCUCCAAGCCUAAG
UA--CUC-GUGCAUGACCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGACGAGGGG-A-GUGAAAUAGAACCUGAAACCGGAUGCCUACAA-ACAGU-CGG
A---GCCC----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------G--GGUGACGGCGUACCUUUUGUAUAAUGGGUCAACGACUUAG
-U-GUAACUAGCAA-GCUUAAGCC----------GGUA---------GGUGUA--GGCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
---------------------UUGAGUUAGUUGCAUUA-GACCCGAAACC-GAGUGAUCU
AGCCAUGAGCAGGCUGAAGGUUGGGUAACA-CCAACUGGAGGGCCGA--ACCCGUAU-CU
GUUGCAAUAGAUUGGGAUGACUUGUGGCUAGGGGUGAAAGGCCAAUCAAACUCGG-AAAU
AGCUGGUUCUCCGCGAAAUCUAUUUAGGUAGAGCGUCGA-CCG-----------------
------------------------------------------------------------
-AAUA-CCCUCGGGGGUAGAGC-ACUGGAUGGG-CUA--UGGGGAC---UCACC--GUCU
UACUGAUCCUAACCAAACUCCGAAUACCGAG-----------------------------
------------------------------------------------------------
----------------------GAGU-A-CU------AGUCGGC-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAAAG-GGCAAC---AACCCUGACCUCCAGCUAAGGUCC
CCAAGU--CA-UGG-CU-AA---GU-GGG-------AAAGGAUGUGAGGAUCCCAAAACA
ACCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAACAGCUCACUGGUC
UAAAUAAGGG-UCUUGCGCCGAAAAUGUAAC-GGGGCUAA-AGCCAUG----------CA
CCGAA-GCUGAGGAUUUGCAGU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------AAUGCA
AG-UGGUAGCGGAGC-GUUCCGU-AAG-UCUGU-GAAGGCG--GACCCGUGAGGG--C-U
GCUGGAGAUA-UCG-GAAGUGCGAAUGU-UGACAU-GAGUA-ACGAUA--AAGG-GAGUG
A--G---------------AGACUC-CCU-CGCCGA-AAGACC-AAGGGUUCC-UGCUUA
AAGUUAAUCUGAGCAGGGUUAGCCGGC-CC-CUAAGACGAGGCGG-A-C-ACGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-ACCACGUU
-AAUA-UUCGUGGGCCUGG----UG-----------------------------------
------------------------------------------------------------
-----------------------------------------GUAGUGACGGAUCU-CGUG
-U-GUUGUACAA-CC-U----UAUUG----GAUUGGUUG---------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------UG-CGGC-G----AAG-AGGUUC-C-AGGAAAUAGCUCCACC
------------------------------------------------------------
--GUAUAGACCGUACCCGAAACCGACACAGGUG-GUCAGGUA-GAGUAUACCAAGGC-G-
CUUGAG-AGAACUAUG-UUGAAGGAACUCGGC-AAAUUGCACGCGUAACUUCGG-AAGAA
GCGUGA-CCCC-A-UU--UUAGG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CAA--CUAUGAUGG--GGUGGC
ACAGACCAGGGGGUAGCGA-----CUGUUUAUCAAAAACACAGGGCUCUGCGAAGUAG--
--CA-A-------------UACGACGU-AUAGGGUCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAAGGGAGGGGU----------GCAA----------GCUCUGAACUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCGCUGUCUCCAAC----AUA-GA
CUCAGUGAAAUUGAAUUCCCCGUGAAGAUGCGGGGUUCCUGCGGUCAGACGGAAAGA-CC
CCGUGCACC-UUUACUAUAGCUUUACACUGGCAUUCGCCAAGGCAUGUGUAGGAU-AGGU
GGUAGGCUUUG---AAGCAGG-GAC----------------------------GCCA---
----------------------------------GU-UUCUGUGGA--GCCAU-CCUUGA
AAUA-CCACC-CUUAUCUUCGUGGAUGUCUAACCGCGG--UCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------UCCGGGACA-GUGUAUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCGA-AAGAGUAAC-GGAGGCGCGCGAUGGUUAGCU
CAGACCGGUCGGAAAUCGGUCGUC-GAGUG-CAAUGGCAU-AAGCUAGCCUGACU-GCGA
----------------------------------GACUGA---CAAGUCGAGCAGAGACG
AAA-GUCGGUCAUAGUGAUCCGGU-----------GGU---CCCGU-GUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUGACCCCCAAGAGUCCAUAUCGACGGGGUUGUUUGGCACCUCGAUGUCGACUCAUCGC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGCGGUACGUGA
GUUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GUGU-AGGAAUAUU
GACAGG-AUC-UGUCCCUAGUACGAGAGGAC-CGGGAUGGACGUAUCUC-UGGUG-GAUC
UGUUGUCCUGCCAAGGGCAU-A-GCAGAGUAGCUAUAUACGGAAUGGAUAACCGCUGAAG
GCA-UC--UAAGCGGGAAACCAACCUGAA-A-ACGAGUGUUCC-CU---A----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UC-AGA----GCCGUGGAAGACGACCACGU-UGAUAGGAC-GGGUGUGGAAG-C
AC-A----------------GC----------AA-----------UGUGUGAAGCUU--A
CCGUUACUAAUA--GCUCGAUCG-ACUUCUUCGU
>Anabaena_variabilis
G-GUCAAGCUAA--UAAGGGCUAAU-GGUGGAUA-CCUAGGC-ACACAG---AGGCGAAG
AAGGACGUGG-UUACCGACGAAAUACUCCGGGGAGUUGGAAGCAAACUA-----UGAGC-
CGG-AGAUGUCCGAAUGGGGCAACCC---UA-----------------------------
--------------------------AAUA-CUAC-CUG---UUGA--------------
------AUAUA--------------------------UA-GAC-AGG-AAAG-AGCCAAC
CCAGCGAACUGAAACAUCUUAGUAGCUG--GAGGAAGAGAAAUCAA-AAGAGAUUCCCUG
AGU-AG-UGGUGAGCGAAAGGGGA-A-GA-GCCUAAACCAGU---UGGUUUA--------
--------------CUG-ACUGGGG--UAG------------UGGGACA------GCGA-
UA----------------------UCGAA---------UCUA---G-------AGAUU-A
GACG------AAG-CA-GCU----------------------------------------
----AAAUA-CUGCA-------CCAGAGAAAGUGAAAGUCUUGUA---------GUCGAA
A--AUUG------A--AGGAU-----------AGU---AGCU--GAAU----CCCGAGUA
GCAUGGGGCACGAGGAAUCCCAUGUGAA-UCAGCGAGG-ACC--AUCUCGUAAGGCUAAA
UA--CUA-CUGUGUGACCGAUAGU-GAAC-C-AGUACCGCGAGGGAAAG-GUGAAA-AGA
AC-CCCGC-AAGGGG-A-GUGAAAUAGAACAUGAAACCAUUAGCUUACAA-GCAGU-GGG
A---GUCC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------AUUAAA-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------CG--GAUGACCGCGUGCCUGUUGAAGAAUGAGCCGGCGACUUAU
-A-GGCACUGGUA--GGUUAAGACG---------AGAA--------UGUCGGA--GCCAA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAAA-------------------------GG-G-CGA
-----------------------UAAUCAGUGUUUAUA-GACCCGAACCC-UGGUGAUCU
AACCAUGGCCAGGAUGAAGCUUGGGUAACA-CCAAGUGGAGGUCCGA--ACCGACCG-AU
GUUGAAAAAUCGGCGGAUGAGUUGUGGUUAGGGGUGAAAUGCCAAUCGAACCAGG-AGCU
AGCUGGUUCUCCCCGAAAUGUGUUGAGGCGCAGCGGUAA-UGA-----------------
------------------------------------------------------------
-UUAU-AGUCGGGGGGUAAAGC-ACUGUUUCGG-UGC--GGGCUGG---GA-GA--CCGG
UACCAAAUCGAGACAAACUCAGAAUACCCGA-----------------------------
------------------------------------------------------------
----------------------U-GG-A-CA------CAUUGCC-AGUGAGA-C-GGUG-
G-GGGAUAAGCUUCAU-CGUCAAGAG-GGAAAC---AGCCCAGACCACCAGCUAAGGUCC
CCAAAU--CA-UCG-CU-AA---GU-GAU-------AAAGGAGGUGAGAUUGCCUAGACA
ACUAGGAGGUUUGCCUAGAAGCAGCCA-CCCUUGAAAGAGUGCGUAAUAGCUCACUAGUC
-----AAGCGAUCUUGCGCCGAAAAUG-AAC-GGGGCU-A-AGCGAUG----------UA
CCGAA-GCUGUGGGAUUAACUA--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AACAUUA
AU-CGGUAGGGGAGC-GUUCCGU-AGU-AGGAA-GAAGCAG--UAGCGGCAAGCA--G-C
UGUGGACGAG-ACG-GAAGUGAGAAUGU-CGGCUU-GAGUA-GCGCAA--ACAU-UGGUG
A--G---------------AAUCCA-AUG-CCCCGA-AACCCU-AAGGGUUCC-AGAGCC
AGGUUCGUCCACUCUGGGUUAGUCGGG-AC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-ACAGGGUC
-AACA-AUCCCUGACUAUG----GUAU-----GGGA------------------------
------------------------------------------------------------
-----------------------------------GCAUUGCUAGGGACGCAUGAAAGAU
AG-CUACGCCCU-GA-U----UGGUU----UGGGAGGAG-UUUA----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------CGAACUCCG-AGUA-G-UGAAGGAUAGUGU-C-AAGAAA-AGCUAGUAA
UGUGA-------------------------------------------------UGAACA
U-AUCGUACCCGUACCCGAAACCGACACAGGUA-GGGAGGUU-GAGAAUACCAAGGG-G-
CGCGAG-AUAACUCUC-UCUAAGGAACUCGGC-AAAAUGGCCCCGUAACUUCGG-AAGAA
GGGGUG-CCCA-C-CG--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------AUGAGGUG--GGUCGC
AGUGAAGAGAUCCAGGCGA-----CUGUUUACCAAAAACACAGGUCUCCGCAAACUCG--
--UA-A-------------GAGGAAGU-AUGGGGGCUGA-CGCCUGCCCAGUGCCG-G-A
AGGUUAAGGAAGUUGGUCA-GGGC---GAAA---GUUUGAAGCUGACGACCGAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGCGUAACGAUC--UGGAUGGUGUCUCAGAG----AGA-GA
CUCGGCGAAAUAGGAAUGUCUGUGAAGAUACGGACUGCCUGCACCUGGACAGAAAGA-CC
CUAUGAAGC-UUUACUGUAGCCUGGAAUUGUGUCCGGGCUUCGCUUGCGCAGGAU-AGGU
GGGAAGCGAUG---AAGUAUU-CCU----------------------------UGUG---
----------------------------------GG-GAAUAUGGA--GCUAA-CGGUGA
GAUA-CCACU-CUGGCGAAGCUAGGAUUCUAACUUAUU--UCCG-U-GAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------AAAAGGACA-GUUUCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGCGCGCAAAGGUUCCCU
CAGCACGCUUGGAAACCGUGCGGC-GAGUG-UAAAGGCAUAAAGGGAGCUUGACU-GCAA
----------------------------------GACCGA---CAAGUCGAGCAGGUACG
AAA-GUAGGCCUUAGUGAUCCGAC-----------GGC---GCAGA-AUG----------
----------GAAUGGCCGUCGCUCAACGG-AUAAAAGUUACUCUAGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AACCUGGGGCGGAAGUACGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGU-----------------
---G-CAG--------------------------------------GCGU-AAGAGCAUU
GAGAGG-AGC-CUUCCUUAGUACGAGAGGAC-CGGGAAGGACGCACCGC-UGGUG-UACC
AGUUAUUGUACCCGCAGUAG-ACGCUGGGUAGCCAAGUGCGGAGCGGAUAACCGCUGAAA
GCA-UC--UAAGUGGGAAGCCCACCUCAA-G-AUGAGUGCUCU-CA---CUACA------
-------------CC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
UAGG--UA-AGG----UCACGGGCAGAACACC-CGU-UUAUAGGCU-CUAAGUGGAAG-U
GC-A----------------GU----------AA-----------UGUAUGAAGCUG--A
GGAGUACUAACA--GACCGAG-G-GCUUGACCUC
>Azoarcus_sp.
G-AUCAAGCGAC--UAAGUGCAUGU-GGUGGAUG-CCUUGGC-GAUCAC---AGGCGAUG
AAGGACGUGC-AAGCCUGCGAAAAGCGGGGGGGAGCUGGCAAUGGAGCU----UUGAUC-
CCC-CGAUAUCCGAAUGGGGAAACCC---GG----CCC--------------GCAA----
--------------------G---GGUC-A-UCCC-GUA---CUGA--------------
------AUCCA--------------------------UA-GGU-ACGUG-GA-AGCGAAC
GCGGCGAACUGAAACAUCUAAGUAGCCG--UAGGAAAAGAAAUCAA-CCGAGAUUCCCCA
AGU-AG-UGGCGAGCGAACGGGGA-A-GA-GCCUG-------------------------
----------------------------------------------CAC------G--A-
CU----------------------AAACC-----------AU---C-------AGCUU-A
GCAA------AAC-GG-UCUG---------------------------------------
----GAAAG-UCCGA-------CGAUACAGGGUGAUAGUCCCGUA---------UGCGAA
A--AGCC------G--GUGGC--------GGGUCU---GAGC--GUGC----GACAAGUA
GGGCGGGACACGUGUAAUCCUGUCUGAA-GAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-GUGAUCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAUCCUGAAACCGCAUGCAUACAA-ACAGU-GGG
A---GCCU-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GAAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------CG--GGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-G-UUCAGUGGCGA-GCUUAACC----------GAAUA----------GGGGA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAUAA-------------------------GG-G-CGA
---------------------CAUAGUCGCUGGGCGUA-GACCCGAAACC-GGAUGAUCU
AUCCAUGGCCAGGAUGAAGGUGCGGUAACA-CGCACUGGAGGUCCGA--ACCCACUA-GU
GUUGAAAAACUAGGGGAUGAGCUGUGGAUAGGGGUGAAAGGCUAAACAAAUCCGG-AAAU
AGCUGGUUCUCCCCGAAAACUAUUUAGGUAGUGCGUCGU-ACG-----------------
------------------------------------------------------------
-GACA-CUUGCGGGGGUAGAGC-ACUGUAAUCGUUGG--GGGGGUC---ACUGC--GAUC
UACCCCGCGAUAGCAAACUCCGAAUACCGCA-----------------------------
------------------------------------------------------------
----------------------AAGU-G-AU------AUACGGC-AGACAGA-C-AUCG-
G-GUGCUAACGUCCGG-UGUCAAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CAAAUG--CA-UGG-CU-AA---GU-GGC-------AAACGAGGUGGGAAGGCAUAGACA
GCUAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUAGUC
-----GAGUCGUCCUGCGCGGAAGAUGUAAC-GGGGCUCA-AGCCAUG----------AA
CCGAA-GCUGCGGAUGUGUCUU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------UGACA
CG-UGGUAGGGGAGC-GUUCCGU-AAG-CCUGC-GAAGGUG--U-CUCGUAAGGG--A-U
GCUGGAGGUA-UCG-GAAGUGCGAAUGC-UGACAU-GAGUA-GCGAUA--AAGG-GUGUG
A--A---------------AAGCAC-CCU-CGCCGA-AAGCCC-AAGGUUUCC-UGCGCA
ACGUUCAUCGGCGCAGGGUGAGUCGGC-CC-CUAAGGCGAGGCAG-A-A-AUGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACAGGUC
-AAUA-UUCCUGUACCGGU----UCUA------GAU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGGAGAA-GGUU
AG-GCCGGCCGG-GU-G----UUGGA----CGUCCCGGU-UUAAGC-GUGUA-----G-G
-----CG-----UG------------------CU-CUC-UAGG-----------------
---CAAAU-CCGGAGAGCU-----GAGCUG----AGGCG-U-G-AUG--AC---------
------------------------------------------------------GA----
-GCGAA-CUUGUUCGCGAAG-UGGU-U-GAUACCCUGCUUC-C-AGGAAA-AGCCUCUAA
GCUU--------------------------------------------------CAGUCU
A-GAAUCGACCGUACCGCAAACCGACACAGGUG-GGCAGGUU-GAAAAUACCAAGGC-G-
CUUGAG-AGAACUCAG-GAGAAGGAACUCGGC-AAAUUGAUACCGUAACUUCGG-GAGAA
GGUAUG-CCCC-A-UU-AGCUUGUAGGAG------------UAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------AUCC-GAA--GGGCGAAGG--GGCCGC
AGAGAAUCGGUGGCUGCGA-----CUGUUUAUUAAAAACACAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAGUGAUGGGGU----------GCAA----------GCUCUUGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUG--GCCACACUGUCUCCUCC----UGA-GA
CUCAGCGAAGUUGAAAUGUUUGUGAAGAUGCAAUCUCCCCGCGGCUAGACGGAAAGA-CC
CCAUGAACC-UUUACUGUAGCUUUGCAUUGGACUUUGACGGGACUUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGCCAG-GAC----------------------------GCUA---
----------------------------------GU-UCUGGUGGA--GCCGU-CCUUGA
AAUA-CCACC-CUGGUGUCGUUGAGGUUCUAACCCAGG--CCCG-UGAAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UCGGGAACA-GUGCAUGGUAGG
CAGUUUGACUGGGGCGGU-CUCCUCCCA-AAAGGUAAC-GGAGGAGUUCGAAGGUCUCCU
AGGUACGGUCGGACAUCGUACUGA-UAGUG-CAAUGGCAA-AAGGAGGCUUGACU-GCGA
----------------------------------GACCGA---CAAGUCGAGCAGGUGCG
AAA-GCAGGACAUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCUGGGG-AUAACAGGCU
GAUUCCGCCCAAGAGUUCACAUCGACGGCGGAGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGUAGCCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGUGA
GCUGGGUUUAAAACGUCGUGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGC-UGGAAGUUU
GAGGGG-ACC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGCACCUC-UGGUG-UACC
GGUUGUGACGCCAGUCGCAU-C-GCCGGGUAGCUAAGUGCGGAAGAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUCGCCUCAA-G-AUGAGACUUCC-CU---GGGGA------
-------------CU--------CGA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UCC
CCCU--GA-AGG----GUCGUGGAAGACCACCACGU-UGAUAGGUC-GGGUGUGGAAG-C
GC-A----------------GU----------AA-----------UGCGUUAAGCUA--A
CCGAUACUAAUU--GCCCGUGAG-GCUUGAUCCU
>Bacillus_anthracis
-----------------GGGCGCAC-GGUGGAUG-CCUUGAC-ACUAGG---AGUCGAUG
AAGGACGGGA-CUAACGCCGAUAUGCUUCGGGGAGCUGUAAGUAAGCUU-----UGAUC-
CGA-AGAUUUCCGAAUGGGGAAACCC---AC----CAUAC-G----------UAAU----
------G---G----U----A---UGGU-A-UCCU-UAU---CUGA--------------
------AUACA--------------------------UA-GGG-UAA-G-GAAGACAGAC
CCAGGGAACUGAAACAUCUAAGUACCUG--GAGGAAGAGAAAGCAA-AUGCGAUUUCCUG
AGU-AG-CGGCGAGCGAAACGGAACA-UA-GCCCAAACCAAG---AGGCUUG--------
--------------CCU-CUUGGGG--UUG------------UAGGACA------UUCUA
UA----------------------CGGAGUUACAAA--GGAA---U-------GAGGU-A
GACG------AAGCGA-CCUG---------------------------------------
----GAAAG-GUCCG-------UCGUAGAGGGUAACAACCCCGUA---------GUCGAA
A--CUUC------G--UUCUC----------UCUU---GAAU--GUAU----CCUGAGUA
CGGCGGAACACGUGAAAUUCCGUCGGAA-UCUGGGAGG-ACC--AUCUCCCAAGGCUAAA
UA--CUC-CCUAGUGAUCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGG-AAGGGG-A-GUGAAAGAGAUCCUGAAACCGUGUGCCUACAA-AUAGU-CAG
A---GCCC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------CG--GGUGAUGGCGUGCCUUUUGUAGAAUGAACCGGCGAGUUAC
-G-AUCCCGUGCGA-GGUUAAGCU---------GAAGA---------GGCGGA--GCCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
----------------------UUAGUACGUGGUCGUA-GACCCGAAACC-AGGUGAUCU
ACCCAUGUCCAGGGUGAAGUUCAGGUAACA-CUGAAUGGAGGCCCGA--ACCCACGC-AU
GUUGAAAAGUGCGGGGAUGAGGUGUGGGUAGCGGAGAAAUUCCAAUCGAACCUGG-AGAU
AGCUGGUUCUCCCCGAAAUAGCUUUAGGGCUAGCCUUAA-GUGU----------------
------------------------------------------------------------
-AAGA-GUCUUGGAGGUAGAGC-ACUGAUUGGA-CUA--GGGGUCC---UCAUC--GGAU
UACCGAAUUCAGUCAAACUCCGAAUGCCAAU-----------------------------
------------------------------------------------------------
----------------------GACU-U-AU------CCUUAGG-AGUCAGA-C-UGCG-
A-GUGAUAAGAUCCGU-AGUCAAAAG-GGAAAC---AGCCCAGACCGCCAGCUAAGGUCC
CAAAGU--GU-GUA-UU-AA---GU-GGA-------AAAGGAUGUGGAGUUGCUUAGACA
ACUAGGAUGUUGGCUUAGAAGCAGCCA-CCAUUUAAAGAGUGCGUAAUAGCUCACUAGUC
-----GAGUGACUCUGCGCCGAAAAUGUACC-GGGGCU-A-AAUACAC----------CA
CCGAA-GCUGCGGAUUGAUACCA-------------------------------------
------------------------------------------------------------
---------------A--------------------------------------------
-----------------------------------------------------UGGUAUC
AG-UGGUAGGGGAGC-GUUCUAA-G-G-ACAGU-GAAGUCA--G-ACCGGAAGGA--C-U
GGUGGAGUGC-UUA-GAAGUGAGAAUGC-CGGUAU-GAGUA-GCGAAA---GAC-GGGUG
A--G---------------AAUCCC-GUC-CACCGA-AUGCCU-AAGGUUUCC-UGAGGA
AGGCUCGUCCGCUCAGGGUUAGUCAGG-AC-CUAAGCCGAGGCCG-A-C-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GGC-GA-U--GGAC-AACAGGUU
-GAUA-UUCCUGUACCACC----UCUU------UAUC---------GUUUGA--------
------------------------------------------------------------
------------------------------------GCAAUGGAGGGCCGCAGAA-GGAU
AG-AAGAAGCGU-GCGA----UUGGU----UGUGCACGU-CCAAGC-AGUUA-----G-G
-----C------UG------------------AU-AAG-UAGG-----------------
---CAAAU-CCGCUUAUCG--UGAAGGCUG----AGCUG-U-G-AUG--GG---------
------------------------------------------------------GA----
-AGCUCCUUAUGGAGCGAAG-UCUU-U-GAUUCCCCGCUGC-C-AAGAAA-AGCUUCUAG
CG-----------------------------------------------------AGAUA
A-AAGGUGCCUGUACCGCAAACCGACACAGGUA-GGCGAGGA-GAGAAUCCUAAGGU-G-
UGCGAG-AGAACUCUG-GUUAAGGAACUCGGC-AAAAUGACCCCGUAACUUCGG-GAGAA
GGGGUG-CUUU-C-UU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------AACGGAA--AGCCGC
AGUGAAUAGGCCCAAGCGA-----CUGUUUAGCAAAAACACAGCUCUCUGCGAAGCCG--
--UA-A-------------GGCGAAGU-AUAGGGGGUGA-CACCUGCCCGGUGCUG-G-A
AGGUUAAGGAGAGGGGUUA-GC-----GUAA-----GCGAAGCUCUGAACUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGUGUAACGAUU--UGGGCACUGUCUCAACC----AGA-GA
CUCGGUGAAAUUAUAGUACCUGUGAAGAUGCAGGUUACCCGCGACAGGACGGAAAGA-CC
CCGUGGAGC-UUUACUGUAGCCUGAUAUUGAAUUUUGGUACAGUUUGUACAGGAU-AGGC
GGGAGCCUUUG---AAACCGG-AGC----------------------------GCUA---
-----------------------------------GC-UUCGGUGGAGGC-GC-UGGUGG
GAUA-CCGCC-CUGACUGUAUUGAAAUUCUAACCUACG--GGUC-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------GA----CC--------------------
--------------------------------------CGGGAGACA-GUGUCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAGUGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGAAUGGUUGGAAAUCAUUCGUA-GAGUG-CAAAGGCAU-AAGGGAGCUUGACU-GCGA
----------------------------------GAACUA---CAAGUCGAGCAGGGACG
AAA-GUCGGGCUUAGUGAUCCGGU-----------GGU---UCCGC-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGCUACCCCGGGG-AUAACAGGCU
UAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUC-----------------
---G-UGG--------------------------------------GCGU-AGGAAAUUU
GAGAGG-AGC-UGUCCUUAGUACGAGAGGAC-CGGGAUGGACGCACCGC-UGGUG-UACC
AGUUGUUCUGCCAAGGGCAU-A-GCUGGGUAGCUAUGUGCGGAAGGGAUAAGUGCUGAAA
GCA-UC--UAAGCAUGAAGCCCCCCUCAA-G-AUGAGAUUUCC-CA---UAGCG------
-------------U----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
CUAG--UA-AGA----UCCCUGAAAGAUGAUCAGGU-UGAUAGGUU-CGAGGUGGAAG-C
AU-G----------------GU----------GA-----------CAUGUGGAGCUG--A
CGAAUACUAAUA--GAUCGAG-G-ACUUAACCAU
>Bacteroides_thetaiotaomicron
---------------AAGGGCGCAU-GGCGGAUG-CCUUGGC-UCUCGG---AGGCGAUG
AAGGACGUGA-UAAGCUGCGAUAAGCUCUGGGUAGGUGCAAAUAACCUU-----UGAUC-
CAG-AGAUUUCCGAAUGGGACAACCC---GG----CAUUC-U-----------GAA----
------G---G----A----A---UGUC-A-UCCA-U-----------------------
------CUUUG----------------------------------AU-G-GA-AGCUAAC
GCAGGGAACUGAAACAUCUUAGUACCUG--UAGGAAAAGAAAAUAA-UAAUGAUUCCCCU
AGU-AG-UGGCGAGCGAACGGGGA-A-UA-GCCCAAACCACCC-AUGUUACG--------
------------G-CAUGUGUGGGG--UUG------------UAGGACC------ACGA-
UG----------------------UCGCA--------AGACA---U-------UUGAUGA
GUAG------AAU-CC-UCUG---------------------------------------
----GAAAG-UUGAA-------CCAUAGACGGUGAUAGUCCGGUA---------UACGAA
G--UCAA------A--UUAAG-----------CGU---AGUG--GUAU----CCUGAGUA
GCGCGGGACACGAGAAAUCUUGCGUGAA-UCUGCCGGG-ACC--AUCCGGUAAGGCUAAA
UA--CUC-CCGAGAGACCGAUAGC-GAAC-C-AGUACUGUGAAGGAAAG-GUGAAA-AGC
AC-UUCGAAUAGAAG-A-GUGAAAUAGUCCCUGAAACCGUGCGCCUACAA-GCGGU-CGG
A---GCUG-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GC--AGUGACGGCGUGCCUUUUGCAUAAUGAACCUACGAGUUAC
-U-UUUUCCGGCAA-GGUUAAGCAUC--------UUGA-------GAUGUGCA--GCCGA
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAACA-------------------------GG-G-CGU
----------------------CGAGUCGGAAGGAGUA-GACGCGAAACC-AAGUGAUCU
ACCCUUGGUCAGGUUGAAGGUUAGGUAACA-CUAACUGGAGGACCGA--ACCGAUAA-GC
GUUGAAAAGCUUCCGGAUGAACUGAGGGUGGGGGUGAAAGGCUAAUCAAACUUGG-AGAU
AGCUCGUACUCCCCGAAAUGCAUUUAGGUGCAGCCUUGU-GAG-----------------
------------------------------------------------------------
-UUAC-UAAUGUGAGGUAGAGCGACUGAUAAGA-UGC--GAGGGCU---UC-AC--CGCC
UAUCAAGUCUUGAUAAACUCCGAAUGCGCAU-----------------------------
------------------------------------------------------------
----------------------UAGUUC-UA------UCACAGG-AGUGAGG-G-CAUG-
G-GUGCUAAGGUCCAU-GUCCUAAAG-GAGAAG---AAUCCAGACCAUCAGCUAAGGUCC
CCAAAU--AA-ACA-CU-AA---GU-UGAA-----CUAACGAAGUCAGAUUGCUAAGACA
GCUAGGAUGUUGGCUUGGAAGCAGCCAUUCAUUUAAAGAGUGCGUAACAGCUCACUAGUC
-----GAGGAGUUUGGCGUGGAUAAUA-AUC-GGGCAUUA-AGUGUUU----------UA
CCGAA-GCUAUGGGAUCA------------------------------------------
------------------------------------------------------------
------------GUAA--------------------------------------------
----------------------------------------------------------UG
AU-CGGUAGGGGAGC-AUUCCAC-UCU-GCGUC-GAAGGUG--A-AGCGUGAGCU--U-U
GCUGGAGCGU-GUG-GAAAAGCAAAUGU-AGGUAU-AAGUA-ACGAUA--AAGG-GGGUG
A--G---------------AAACCC-CCU-CGCCGA-AAGACU-AAGGUUUCC-UGAUCA
ACGCUAAUCGGAUCAGGGUUAGUCGGG-UC-CUAAGGCCCAGCCG-A-A-CGGU----GA
G-----------------------------------------------------------
-------------------------------------GCC-GA-U--GGCAGAACAGGUU
-AAUA-UUCCUGUACUACC----UUAA------GGA------------------------
------------------------------------------------------------
------------------------------------GUGACGUGGAGACGGAGCAGUGAC
AG-CGCCGCGGA-CU-G----ACGGA----AUAGUCCGU-UGAAGG-GUGUA-----G-A
-----UG--UUGAU------------------CA-UCC-CAGG-----------------
---CAAAU-CCGGGAUGAG-----AGUCGA----ACCUG-A-U-AGUAUGG---------
------------------------------------------------------AGC-GU
UCUUCGGAACAAUCCAAUAG-UGCG-U-GUAAGCAUACUCC-C-AAGAAA-AUCCGCUAA
ACUU--------------------------------------------------AAUCCU
U-GAGGUACCCGUACCGCAAACGGACACACGUA-GUCGGGUU-GAAUAUACUAAGGC-G-
CUUGAG-UGAUUCACG-GUUAAGGAACUAGGC-AAAUUGACCCUGUAACUUCGG-GAUAA
AGGGUC-CCAA-C-GA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGUU--GGGCGC
AGAGAAUAGGUCCAGGCAA-----CUGUUUAACAAAAACACAGGGCUGUGCCAAAUUG--
--AA-A-------------GAUUACGU-AUACAGCCUGA-CACCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGAUGUCA-UC-----GCAA-----GAGAAGCAUUGAAUUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGUGUAAUGAUC--UGGACACUGUCUCAACC----GUG-AG
CUCAGUGAAAUUGUAGUAUCGGUGAAGAUGCCGAUUACCCGCGAUGGGACGAAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUAACAUUGAAUUUGGGUAAUUGAUGUGUAGGAU-AGGC
CGGAGACUUUG---AAGCAGG-UAC----------------------------GCCA---
-----------------------------------GU-AUUUGUGGAGUC-GC-UGUUGA
AAUA-CGGCC-CUUUGAUUAUUUGAGUUCUAACUC-GU---------AGUU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCGAGGACA-CUGUUUGGUGGG
UAGUUUGACUGGGGUGGU-CGCCUCCAA-AAUAGUAAC-GGAGGCUUCUAAAGGUGCCCU
CAGGACGAUUGGUAACCGUCCGUA-GAGUG-UAAUGGCAU-AAGGGCGCUUGACU-GGGA
----------------------------------GACUAA---CAAGUCGAUCAGGUAGG
AAA-CUAGAGCAUAGUGAUCCGGU-----------GUU---UCCGU-AUG----------
----------GAAGGGACAUCGCUCAAAGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUCCCUCCCAAGAGCUCAUAUCGACGGAGGGGUUUGGCACCUCGAUGUCGGCUCGUCAC
AUCCUGGGGCUGGAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGUGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCUAUC-----------------
---G-UGG--------------------------------------GCGU-AUGAAAUUU
GCGUGG-CUC-UGACACUAGUACGAGAGGAC-CGUGUUGGACUGACCGC-UGGUU-UACC
AGUUGUGCCGCCAGGUGCAU-U-GCUGGGUAUCUAAGUCGGGAAUGGAUAAGUGCUGAAA
GCAUUC--UAAGUACGAAGCCA----CAA-G-AUUAGAUUCUU-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------GG----GUCGUUAAAGACGAUGACGU-UGAUAGGAU-GCAGGUGUAAA-G
GU-G----------------GU----------AA-----------CAU-CAAAGCCG--A
GCAUUACUAAUU--GCCCG-------UUCACUUU
>Bartonella_henselae
A--UCAAGUGUC-UUAAGGGCAUUU-GGUGGAUG-CCUUGGC-AUGCAC---AGGCGAUG
AAGGACGUGA-UACGCUGCGAUAAGCUACGGGGAGGUGCGAAUACCCUU-----UGAUC-
CGU-AGAUCUCCGAAUGGGGCAACCC---AC----CUUUG-AUGGCUAGAAAAAUUUUUC
UAGUCGU---C----AGAUAA---AGGU-A-UCUA-CAC---CUGAA-------------
------UAAA--------------------------AUA-GGGUGUA-A-GA-AGCAAAC
GCAGGGAACUGAAACAUCUAAGUACCUG--UAGGAAAGGACAUCAA-ACGAGACUCCGUU
AGU-AG-UGGCGAGCGAAAGCGGA-C-CA-GGCCA-------------------------
----------------------------------------------GUG------G----
CU------------------------UGA-----------AG--CA-------AGAAA-A
GUAG------AAU-CG-ACUG---------------------------------------
----GAAAG-UCGAA-------CCAAAGAGGGUGAUAGUCCCGUA---------UACGUA
A--CUCU------U--CUUUA-----------------------AGUC----CUAGAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-UAUGGGUCG-ACC--ACGAUCCAAGCCUAAG
UA--CUC-GUGCAUGACCGAUAGC-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGU
AC-CCCGACAAGGGG-A-GUGAAAAAGUACCUGAAACCGAAUGCCUACAA-ACAGU-CGG
A---GCCC-A---AG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------A-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUUG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------U----
--------------UCUG--GGUGACGGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAG
-U-CUAACGAGCAA-GCUUAAGCC----------GGUA---------GGUGUA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAACA-------------------------GG-G-CGU
----------------------UCAGUUCGUUGGAUUA-GACCCGAAACC-GAGUGAUCU
AGCCAUGAGCAGGCUGAAGGUAAGGUAACA-CUUACUGAAGGGCCGA--ACCCGUAU-CU
GUUGCAAUAGAUUGGGAUGACUUGUGGCUAGGGGUGAAAGGCCAAUCAAACUCGG-AAAU
AGCUGGUUCUCCGCGAAAUCUAUUUAGGUAGAGCGUUAG-UCG-----------------
------------------------------------------------------------
-AAUU-CUCCAGGGGGUAGAGC-ACUGGAUGGG-CUA--GGGGUCC---UCACC--GGAU
UACCAAACCUAACCAAACUCCGAAUACCUGG-----------------------------
------------------------------------------------------------
----------------------AAGA-A-CU------AACUAGC-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGGAGAG-GGAAAC---AACCCUGACCACCAUCUAAGGUCC
CCAAGU--UA-UGG-CU-AA---GU-GGG-------AAAGGAUGUGAGGAUCCCAAAACA
ACCAGGAUGUUGGCUUAGAAGCAGCCA-CCAUUUAAAGAAAGCGUAACAGCUCACUGGUC
UAAAUAAGGGUCCCUGCGCCGAAAAUGUAAC-GGGGCUAA-AGCCAUA----------CA
CCGAA-GCUGUGGAUUUACUCC--------------------------------------
------------------------------------------------------------
------------UUAA--------------------------------------------
------------------------------------------------------GGAGUA
AG-UGGUAGCGGAGC-GUUCCGU-AAG-CCUGU-GAAGGGA--GACUCGUGAGAG--C-U
CCUGGAGGUA-UCG-GAAGUGAGAAUGC-UGACAU-GAGUA-ACGAUA--AAGG-GAGUG
A--G---------------AGACUC-CCU-CGCCGA-AAGUCC-AAGGGUUCC-UGCUUA
AAGUUAAUCUGAGCAGGGUGAGUCGGC-CC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-ACCACGUU
-AAUA-UUCGUGGACCUGU----GG-----------------------------------
------------------------------------------------------------
-----------------------------------------GUAGUGACGGAUUG-CGUG
-U-AUUGUAAGG-UC-U----UAUUG----GAUUGAUCU-UG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CAGU-G----AAG-CAGUUC-C-AGGAAAUAGCUCCCAC
------------------------------------------------------------
--AUAGAGACCGUACCCCAAACCGACACAGGUG-GACUGGUA-GAGAAUACUAAGGC-G-
CUUGAG-AGAACUACG-UUGAAGGAACUCGGC-AAAUUGCACGCGUAACUUCGG-AAGAA
GCGUGA-CCCU-U-UA--GCGGG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CAA--CCGUUAGAG--GGUGGC
ACAGACCAGGGGGUAGCGA-----CUGUUUACCAAAAACACAGGGCUCUGCGAAGUCG--
--CA-A-------------GACGACGU-AUAGGGUCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGAUGU----------GCAA----------GCAUUGAAUUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCGCUGUCUCCAAC----GUA-GA
CUCAGUGAAAUUGAAUUCCCCGUGAAGAUGCGGGGUUCCCGCGGUUAGACGGAAAGA-CC
CCGUGCACC-UUUACUAUAACUUUACACUGGCAUUUGUGUCUGUAUGUGUAGGAU-AGGU
GGUAGACUUCG---AAGCAGG-GGC----------------------------GCCA---
-----------------------------------GC-CCUUGUGGAGUC-AU-CCUUGA
AAUA-CCACC-CUUACCGAUAUGGAUGUCUAACCGCAG--UCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------UUCGGGACC-GUGUAUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAGAGUAAC-GGAGGCGCGCGAUGGUAGGCU
CAGAACGGUCGGAAAUCGUUUGUU-GAGUG-CAAUGGCAU-AAGCCUGCCUGACU-GUGA
----------------------------------GACUGA---CAAGUCGAGCAGAGUCG
AAA-GACGGUCAUAGUGAUCCGGU-----------GGU---CCCGU-GUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUGACCCCCAAGAGUCCAUAUCGACGGGGUUGUUUGGCACCUCGAUGUCGACUCAUCGC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGCGGUACGUGA
GUUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GUGU-UGGAAUAUU
GACAGG-ACC-UGUCCCUAGUACGAGAGGAC-CGGGAUGGACGUAUCUC-UGGUG-GACC
UGUUGUGGCGCCAGCCGCAU-A-GCAGGGUAGCUAUAUACGGACGAGAUAACCGCUGAAG
GCA-UC--UAAGCGGGAAACUCACCUGAA-A-ACAAGUAUUCC-C---------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGA----ACCGUGGUAGACUACCACGU-UGAUAGGUC-AGGUGUGGAAG-U
GU-G----------------GU----------AA-----------CACAUGAAGCUU--A
CUGAUACUAAUC--GUUCAAUCG-ACUUGAUCGU
>Bifidobacterium_longum
GUGUGUUGCUUG--CAAGGGCGUAU-GGUGGAUG-CCUUGGC-AGACAG---GACCGAUG
AAGGACGUUU-GAGGCUGCGAUAUGCCUCGGGGAGCCGCCAACAGGGCU----UUGAUC-
CGA-GGAUUUCCGAAUGGGGGAACCC---AC----CGACC-G----------UCAU----
------G---G----G----U---CGGU-A-CCGG-C-----------------------
------UUCG-----------------------------------GC-C-GG-GGGGUAC
GCAGGGAAGUGAAACAUCUCAGUACCUG--CAGGAAAGGA-----------UAUUCCGUG
AGU-AG-UGGCGAGCGAAAGCGGA-U-GAUGGCCAAACCUUGC-GCGUGUGA-UACCCG-
UCGG---GGG--U-UGCGCGCGGGGUGUUG------------CGGGAUC------GCGUG
CGCCGG--CUCCGACGGGCCGGCCGGCAGUUGCAGAAAACCA---U-------GUGUC-A
GGGG------AAC-CG-GGUU---------------------------------------
----GAAUA-CCGGG-------CCGCAGAGGGUGAGGGCCCCGUA---------CCUGAA
C--GCGC------A--UGGUC----------UGCCG-AUCGC--GUCU----CCCAAGUA
GCACGGGUCCCGUGGAACCCCGUGCGAA-UCCGCCCAG-ACC--GUUGGGUAAGCCUGAA
UA--UUC-CUGUCUGACCGAUAGC-GAAC-G-AGUACCGUGAGGGAAAG-GUGAAA-AGU
AC-CCCGG-GAGGGG-A-GUGAAACAGUCUCUGAAACCGUGCGCCUACAA-UCCGU-CGG
A---GCCC-U--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UUUGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGACGGCGUGCCUAUCGAAAAAUGAGUCUGCGAGUCAG
UG-GCAUGUGGCGA-GCAUAACCC----------GUGU---------GGGGUA--UGCGU
AGCGAAGG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAA--------------------------AG-G-CGU
---------------------UUGAGUCGCGUGUCCUG-GACCCGAAGCG-GGAUGAUCU
AGCCCUGAGCAGGUUGAAGCGCGGGUAAGA-CCGCGUGGAGGACCGA--ACCCACCU-GG
GUUGAAAACCGGGGGGAUGACUUGGGGCUAGGGGUGAAAGGCCAAUCAAAUUCCG-UGAU
AGCUGGUUCUCUCCGAAAUGCAUUUGGGUGCAGCGUCGG-GUC-----------------
------------------------------------------------------------
-AUUACGUCCCGGGGGUAGAGCUACUGGAUGCU-UGC--GGGCCC----GUAUC---GGG
UACCAACAGCAACCAAACUCCGAAUACCGGU-----------------------------
------------------------------------------------------------
----------------------GACGCG-UA------UCCCGGC-AGUGAGU-C-GGCG-
G-GGGAUAAGCUUCGU-CGUCGAAAG-GGAAAC---AGCCCAGACCGUCGUCUAAGGUCC
CGAAGC--GU-GUG-CU-AA---GU-GGG-------AAAGGAUGUGGAGUCGCAUAGACA
GCCAGGAGGUUGGCUCAGAAGCAGCCA-CCCUUGAAAGAGUGCGUAACAGCUCACUGGUC
-----UAGUGGUUCCGCGCCGACAAUGUAGC-GGGGCUCA-AGCACAC----------CA
CCGAA-GACGCGGCAGUAUUU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------------UGUA
CU-GGGUAGGAGAGC-GUCCCAU-G-A-GGGGC-GAAGCGG--C-CGUGUGAACG-CG-C
CGUGGACUUC-AUG-GGAGUGAGAAUGC-AGACAU-GAGUA-GCGAGA---GAC-GGGUG
A--A---------------GAUCCC-GUC-CGCUGG-AUGACC-AAGGGUUCC-AGGGCC
ACGUUCAUCGUCCCUGGGUGAGUCGGG-UC-CUAAGGCGAGGCCG-A-C-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GAAU--GGAUGAACGGGUC
-GAUA-UUCCCGUACCGGC----UUUC------AGC----------CGCCAAAACCGAGG
CUUGGAGUACUAACCUCCGGGUCCGGGCUUACUGCUCCUUCGGGGGCGGGAUGCCCUGGC
CUGUUGGGACCGAUCCUUGUAGUAGGUCA-------GCGCAGGAGUGACGCAGAA-GGGU
AG-CCGGCCGCG-GA-G----GUGGU----CUUCCGUGG-UCAAGC-ACGCA-----G-G
-----G------CG------------------UG-GGA-CAGG-----------------
---CAAAU-CCGUCCCGCA--U-GGGUCCG----AGGUG-C-G-AUG--AU---------
------------------------------------------------------GG----
-GGGCCU-UAUGGCCCGAUA-UCCG-G-UGAUCCCGGCUGC-C-GAGAAA-AGCUUCGGC
GUCA---------------------------------------------------GGCUC
G-AAGCCGCCCGUACCCCAAACCGACACUGGUG-GUCAGGUA-GAGAAUACCAAAGC-G-
AUCGAG-CGAAUCCUG-GUCAAGGAACUCGGC-AAAUCACUCCCGUUCCUUCGG-UUUAA
GGGAGA-CCCC-C-GA--UGGUGAACCGC----------CUCGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GCGG-GGA--GCUUUUGGG--GGUGGC
ACAGACCAGGGGGUAGCGA-----CUGUUUACCAAAAACACAGGUGCAUGCGAAGGCG--
--CA-A-------------GCCGCUGU-AUAUGCACUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAGAGGAUCCGUCA-GCC----UUCG----GGUGAAGCGGUGAAUUCAAGCCC--
CGGUAAAC-GGCGGUGGUAACUAUAACCAUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCACUGUCUCGACC----AGG-AG
CUCGGCGAAAUUGCAGUACGAGUAAAGAUGCUCGUUAAGCGCAGAAGGACGAAAAGA-CC
CCG-GGACC-UUUACUAUACCUUGGUAUUGGCAUUCGGUGUGGAUUGUGUAGCAU-AGGC
GGGAGGCCGAG---AGGCGCG-GUC----------------------------GCCA---
-----------------------------------GA-UCGCGCGGAGCC-GUAAGGUGA
AAUA-CCGCU-CUGUUCGCAUUGGAUGUCUAACCUCGA--ACAG-U-CAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CU----GU--------------------
--------------------------------------UCAGGGACA-GUGCCUGGCGGG
UAGUUUAACUGGGGCGGU-UGCCUCCCA-AAGAGUAAC-GGAGGCGCCCAAAGGUCCGCU
CAGCCCGGUUGGCAAUCGGGUGGC-GAGUG-CAAGUGCAC-AAGCGGGCUUGACU-GCGA
----------------------------------GGACGA---CGGUCCGAGCAGGGACG
AAA-GUCGGGACUAGUGAUCCGGU-----------GCC---GGUGU-ACG----------
----------GACGCGGCAUCGCUCAACGG-AUAAAAGGUACCCCGGGG-AUAACAGGCU
GAUCAUUCCCAAGAGUCCAUAUCGACGGGAUGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUUCGGCUGUUCGCCGAUUAAAGCGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUUGGUCUCUAUCCUCU-----------------
---G-CGC--------------------------------------UCGU-UGGAAUGCU
GAGGAG-GCC-UGCCCAUAGUACGAGAGGAC-CUGGGUGGACGAACCUC-UGGUA-UGCC
GGUUGUCACGCCAGUGGCAC-G-GCCGGUUGGCUACGUUCGGAAGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCUGCUCCAA-G-AUAGCAUUCCG-UG---GAACC------
-------------UU---------CG----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AGU
UCCU--GU-AGU----CCCCAUGCAGAACACGUGGU-CGAUAGGCC-GGACGUGGAAG-C
CC-C----------------GC----------GA-----------GGGGUGGAGCCG--A
CCGGUACUAACG--GACGAAA-G-GCAACACUAA
>Blochmannia_floridanus
A-GUUAAGUGAU-GUAAGCGUAUAC-GGUGGAUG-CCUUGGC-AGUCAA---AGGCGAUG
AAGGACGUGC-UAAUCUGCGAAAAGUAUCGGUGAGCUGAUUUGAAGCGUU---AUUAAC-
CGG-UGAUGUCCGAAUGGGGAAACCUA--GU----GCAAU------------UUAA----
----------A----U----U---GUGCAU-UAUU-AUUUA-GUGA--------------
------AUUUA--------------------------UA-GCU-AAA-U-GA-AGCAAAC
CAGAGGAACUGAAACAUCUUAGUACUCU--GAGGAAAAGAAAUCAA-UUGAGAUUCUCGU
AGU-AG-UGGCGAGCGAACCGGGA-U-AA-GCCCA-------------------------
-------------------------------------------GUAGCA------AAAUA
UUA---------------------UAAUU-----------AG---U-------AUAUU-A
AGAG------AAU-AA-UUUG---------------------------------------
----GAAAA-AUUAG-------CAAUAUAGGGUGAUAGCCCCGUA---------UCUGAA
A--AUAU------A--UUAGU----------UUGU-----AA--GCUC----GAAGAGUA
GGACGGGACACGUGAUAUCUUGUCUGAA-CAUAGGGGG-ACC--AUCCUCUAAGGCUAAA
UA--CUC-UUGACUGACCGAUAGU-GAAC-U-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGGUUAGGGG-A-GUGAAAUAGAACCUGAAACCGUAUACGUACAA-GCAGU-AGG
A---GCGA-A---UA---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CA--GUGUGA--U--------------------U------AG------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUGU------------------
------------------------------------------------------------
------------------------------------------------------------
-------------AUA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------A-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------AUGUAUAAA----
--------------UAUU--CGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAU
-A-UUCUGUAGCAA-GGUUAACU----------GAUUA----------AGGGA--GCCGU
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAC--------------------------UG-G-CGU
----------------------UAAGUUGCAGGAUAUA-GACCCGAAACC-CGGUGAUCU
AACCAUGAACAGGUUGAAGAUUGGGUAAUA-CUAAUUGGAGGACCGA--ACCGACUA-AU
GUUGAAAAAUUAGCGGAUGAUUUGUGGUUAGGGGUGAAAGACCAAUCAAACCGGG-AGAU
AGCUGGUUCUCCUCGAAAGCUAUUUAGGUAGCGCCUUGU-AAA-----------------
------------------------------------------------------------
-UUCA-UCUUUGGGGGUAGAGC-ACUGUUUCGA-UUA--GGGGUUC---AAACC--GAGC
UACCAACUCGAUGCAAACUACGAAUACCAAA-----------------------------
------------------------------------------------------------
----------------------GAAU-GUUA------UUACUGG-AGACACA-C-AGCG-
G-GUGCUAACAUUCGU-UGUGGAAAG-GGAAAC---AACCCAGAUCGCUAGCUAAGGUCC
CUAAGU--UA-UGA-UU-AA---GU-GGG-------AAACGAUGUGAGAAGGCAUAAACA
GCCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUCGGCUUGCGCGGAAGAUGUAAC-GGGGCU-A-AAUCAUA----------CA
CCGAA-GCUGCGACAAUAGAACAU------------------------------------
------------------------------------------------------------
-------------UUA--------------------------------------------
----------------------------------------------------GUGUUUUG
UU-GGGUAGAGGAGC-GUUCUGU-AAG-CCUGA-GAAGAUA--U-AUUGUGAGAU--A-U
AUUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-AAGUA-ACGAUA--AAGC-AGGUG
A--A---------------AAACCU-GCU-CGCCGA-AAAACU-AAGGUUUCC-UGUCCA
ACGUUAAUCGGGGCAGGGUAAGUCGAC-CC-CUAAGGUGAGGCCA-A-A-CGGC----GU
A-----------------------------------------------------------
-------------------------------------GCU-AA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACUGGA----UGUA------AUU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGUAACGGAGAA-AGCU
AG-GUUCGCCGA-GG-A----UCGGU----AGUCUCGGU-UUAAGC-AAGUA-----G-A
-----UG-----AG------------------AA-GAUAUAGG-----------------
---AAAAU-CCGAUCUUCU--UU-ACAUUA----AGAUG-U-G-AUG--AC---------
------------------------------------------------------GA----
-GCUGC-UACGGUAGCGAAG-GAAU-U-GAUGCUAUGCUUC-C-AAGAAA-AACCUCUAA
GCUU--------------------------------------------------CAGAUU
A-UAUCCAAUCGUACCGUAAACCGACACAGGUA-GUUAGGUA-GAGAAUACUAAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AAAAUAGUGCCGUAACUUUGG-GAGAA
GGCACG-CUAA-C-AUGUAAGUGAAGGGA-----------GUAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------UUCU-GGA--GCUGAAGUU--AGUCGA
AGAUACCAGCUGGCUGCAA-----CUGUUUAUUAAAAACACAGCACUGUGCAAACACG--
--AA-A-------------GUGGAAGU-AUACAGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUUGAGAUGGUUA-UCUUU--GCAA--AAAGAGAAGCUUUUGAUCGAAGCCU--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGAUG--GUCAGACUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAAUUCGCCGUGAAGAUGCGGCGUACCCGCGGCAAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUGAUACUGAAUGUUGGAUUUUAAUGUGUAGGAU-AGGU
GGGAGGCUAUG---AAAUAAA-GAC----------------------------GCUA---
-----------------------------------GU-UUUUAUGGAGCC-GU-CCUUGA
AAUA-CCACC-CUUUGAUGUUUAAUAUUCUAACUUUAG--UCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------UUAAGGACA-GUGUCUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCUA-AAGAGUAAC-GGAGGAGCACAAAGGUUAGCU
AAUUACGGUUGGAAAUCGUAAGGU-UAGUG-CAAAGGCAU-AAGCUAGCUUAACU-GCGA
----------------------------------GAGUGA---CGAUUCGAGCAGAUGCG
AAA-GCAGGUCUUAGUGAUCCGGU-----------GGU---CCUGU-AUG----------
----------GAAAGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
AAUACCGCCCAAGAGUUCGUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGCAGCAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UGGAAGAUU
GAGAGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGUACCUA-UGGUG-UUCG
GGUUGUCAUGCCAAUGGCAU-U-GCCCGGUAGCUAUGUACGGAAAAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUUGCCUCAA-G-AUGAGUCUUCC-CU---GAGGA------
-------------UUAUUAAUUACAA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UCC
UCCU--AA-AGG----GCCGUUAAAGACUAUGACGU-UGAUAGGUC-GGGUGUGUAAG-C
AU-U----------------GU----------GA-----------GAUGUUUAGCUA--A
CCGAUACUAAUG--ACCCGUGAGAACUUAACUUC
>Bradyrhizobium_japonicum
A-AUCAAGUGCC-UUAAGGGUGUUC-GGUGGAUG-CCUUGGC-GCUGAG---AGGCGAUG
AAGGACGUGC-UACGCUGCGAUAAGCCGUGGGGAGCUGCGAAGAAGCUU-----UGAUC-
CGC-GGAUUUCCGAAUGGGGAAACCC---AC----CUUCG-AUAGCCGGAA--CUU-UUC
CGGUUAU---CAAGAG----A---AGGU-A-UGAG-ACUU--CUGA--------------
------AUACA--------------------------UA-GGAGGUU-U-CA-AGCAAAC
CCAGGGAACUGAAACAUCUAAGUACCUG--GAGGAAAGGACAUCAA-CAGAGACUCCGUU
AGU-AG-UGGCGAGCGAACGCGGA-C-CA-GGCCA-------------------------
----------------------------------------------GUG------A----
UA------------------------CAU-----------CA---A-------AGACA-A
UCGG------AACCAG-UCAG---------------------------------------
----GAAAG-CUGGG-------CCUCAGAGGGUGAUAGCCCCGUA---------CGAGUA
A--UGCG------A--UGAUG-----------------------UAUC----CACGAGUA
AGGCGGGACACGUGCAAUCCUGUCUGAA-CGCGGGGGG-ACC--ACCCUCCAAGCCUAAG
UA--CUC-CUCAGCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGACGAGGGG-A-GUGAAAUAG-ACCUGAAACCGGACACCUACAA-ACAGA-UGG
A---GCCC-A---AG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------A-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UUCGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------U----
---------------CUG--GGUGACAUCGUACCUUUUGUAUUAUGGGCCAGCGACUUAA
-U-UUAACGAGCAA-GCUUAAGCC----------GAUA---------GGCGAA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
----------------------CAAGUUCGUUGUAUUA-GACCCGAAACC-UAGUGAUCU
AGCCAUGAGCAGGUUGAAGGUGAGGUAACA-CUCACUGGAGGACCGA--ACGGGUGC-CU
GUUGAAAAAGGCUCCGAUGACUUGUGGUUAGGGGUGAAAGGCCAAUCAAACUGGG-AAAU
AGCUGGUUCUCCGCGAAAGAUAUUUAGGUAUCGCCUCGG-AUG-----------------
------------------------------------------------------------
-AAUA-CCUCAGGGGGUAGAGC-ACUGGAUGGG-CUA--GGGGGAC---UUACC--GUCU
UACCAAACCCAACCAAACUCCGAAUACCUGA-----------------------------
------------------------------------------------------------
----------------------GAGU-A-CU------AUCCGGG-AGUCACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGGAGAG-GGAAAC---AACCCGGACCUACAGCUAAGGCCC
CUAAUU--CG-UGG-CU-AA---GU-GGG-------AAAGGAUGUGGAAAUCCCAAAACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCGUAACAGCUCACUGGUC
UAAAUAAGGGUUUCUGCGCCGAAGAUGUAAC-GGGGCUCA-AGCCACG----------AG
CCGAA-GCUUAGGGUGUGAUCC--------------------------------------
------------------------------------------------------------
--------------GC--------------------------------------------
----------------------------------------------------AAGGGUCA
CG-CGGUAGCGGAGC-GUUCUGU-AAG-CCUGC-GAAGGGC--GACUCGUGAGAG--C-G
CCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGGCAU-GAGUA-ACGACA--AACA-CUGUG
A--A---------------AGACAG-UGU-CGCCGA-AAGUCC-AAGGGUUCC-UGCGUA
AAGUUAAUCUUCGCAGGGUUAGCCGGU-CC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AUGCAGUG
-AAUA-UUCUGCAGCCAGU----GG-----------------------------------
------------------------------------------------------------
-----------------------------------------AUGGUGACGAAUCC-CGUG
-U-GUUGUCCGA-CC-U----UAAUG----GAUUGGUUG-GG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CUUC-G----AAG-GGGUUC-C-AGGAAAUAGCCUCCA-
------------------------------------------------------------
--CAUUAGACCGUACCCGAAACCGACACAGGUG-GACUGGUA-GAGUAUACCAAGGC-G-
CUUGAG-AGAACUAUG-UUGAAGGAACUCGGC-AAUUUACCUCCGUAACUUCGG-GAUAA
GGAGGC-CCAU-U-GC--UCGCG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CAA--GCGGGCAGU--GGGGGC
ACAGACCAGGGGGUGGCAA-----CUGUUUAACAAAAACACAGGGCUCUGCGAAAUCG--
--CA-A-------------GAUGACGU-AUAGGGUCUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAGAGGAGAGGU----------GCAA----------GCCUUGAAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGACU--UCCCCGCUGUCUCCAAC----AUA-GA
CUCAGUGAAAUUGAAUUCCCCGUGAAGAUGCGGGGUUCCUGCGGUCAGACGGAAAGA-CC
CCGUGCACC-UUUACUGUAGCUUUGCGCUGGUAUUCGUGACUGUUUGUGUAGAAU-AGGU
GGUAGGCUUUG---AAGCCGU-GGC----------------------------GCCA---
-----------------------------------GC-CAUGGUGGAGCC-GAAAUGUGA
AAUA-CCACC-CUAAUGGUUAUGGAUAUCUAACCGCGU--UCCC-U-CAGC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------GG----GA--------------------
--------------------------------------ACCGGGACA-GCGCAUGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCCA-AAGAGUAAC-GGAGGCGUGCGAAGGUAGGCU
CAGAACGGUCGGAAAUCGUUCGUC-GAGUA-UAAUGGCAU-AAGCCUGCCUGACU-GCGA
----------------------------------GAUCUA---CGAAUCGAGCAGAGACG
AAA-GUCGGUCAUAGUGAUCCGGU-----------GGU---CCCGC-GUG----------
----------GAUGGGCCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUGACGCCCAAGAGUCCAUAUCGACGGCGUCGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGGAGAAGGUCCCAAGGGUUCGGCUGUUCGCCGAUUAAAGUGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GUGU-UGGAAUGUU
GAGAGG-AUU-UGCCCCUAGUACGAGAGGAC-CGGGGUGAACGUACCUC-UGGUG-GAGC
UGUUGUCGCGCCAGCGGCAG-U-GCAGCAUAGCUAUGUACGGACGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACCCACCUCAA-A-ACGAGCAUUCC-CU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGA----ACCGUGGAAGACCACCACGU-UGAUAGGCC-GGAUGUGGAAG-U
GC-A----------------GU----------AA-----------UGCAUGCAGCUU--A
CCGGUACUAAUC--GUUCGAUUG-GCUUGAUUGC
>Buchnera_aphidicola
G-GUUAAGCAAA--UAAGCGUACAU-GGUGAAUG-CCUUGGC-AGUCAG---AGGCGAAG
AAGGACGUGC-UAAUCUGCGAAAAGCGUCGGCAAGCUGAUAUGAAGCGC----AAUAAC-
CGU-CGAUAUCCGAAUGGGGAAACCC---GA----UGCA-------------AUAU----
---------------U----G---CAUC-A-UUAU-UAA---CUGAA-------------
------UCAA--------------------------AUA-AGU-UAA-U-AA-AGCAAAC
CAAGGGAACUGAAACAUCUAAGUACCUU--GAGGAAAAGAAAUCAA-CCGAGAUUCCCCC
AGU-AG-UGGCGAGCGAAAAGGGA-A-CA-GCCCA-------------------------
--------------------------------------------GAAUC------A-AA-
AU----------------------CAAUA-----------UA---A-------AUUAU-A
GUAG------AAU-GA-UUUG---------------------------------------
----GAAAU-UUCAG-------CGAUACAAGGUGAUAGCCCCGUA---------UACAAA
A--UAUU------U--UAUAU-----------UGU-----GG--AUUC----AAAAAGUA
GAGCGGGACACGAGAAAUCCUGUUUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUGACUGACCGAUAGU-GAAC-U-AGUACCGUAAGGGAAAG-GCGAAA-AGA
AC-CCCGGCGAGGGG-A-GUGAAAUAGAACCUGAAACCGUGUACGUACAA-GCAGU-GGA
A---GCAU-A---UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------U-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UAAAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------U----
--------------AAUU--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUGU
-A-CUCUGUAGCAA-GGUUAACU----------UAAUA----------AGGGA--GCCGA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------UAAAU-------------------------AG-G-CGU
----------------------UAAGUUUCAGGGUACA-GACCCGAAACC-CGGUGAUCU
AGCCACGGGCAGGUUGAAGGUUGGGUAAAA-CCAACUGGAGGACCGA--ACCGACUG-AU
GUUGAAAAAUCAGCGGAUGACCUAUGGCUAGGGGUGAAAGGCCAAUCAAACCGGG-AGAU
AGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGU-GAA-----------------
------------------------------------------------------------
-UUCA-UCUUCGGGGGUAGAGC-ACUGUUUCGA-CUA--GGGGGCC---AUCCC--GGCU
UACCAAACCGAUGCAAACUCCGAAUACCGUA-----------------------------
------------------------------------------------------------
----------------------GAAU-GUUA------UCACGGG-AGACACA-C-AGCG-
G-GUGCUAACGUUCGU-UGUGGAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CAAAGU--CA-UAG-UU-AA---GU-GGG-------AAACGAUGUGGGAAGGCAUAAACA
GCCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----AAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCUCA-AACUAUG----------CA
CCGAA-GCUGCGGCAGCAAAAA--------------------------------------
------------------------------------------------------------
--------------UU--------------------------------------------
---------------------------------------------------AUAUUUUUG
CU-GGGUAGGGGAGC-GUUCUGU-AAG-CCAAC-GAAGAUA--U-AUUGUAAAAU--A-U
AUUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-GAGUA-ACGAUA--AAGC-AGGUG
A--A---------------AAACCU-GCU-CGCCGA-AAAACC-AAGGUUUCC-UGUCCA
ACGUUAAUCGGGGCAGGGUAAGCCGAC-CC-CUAAGGCGAGGCUG-A-A-AAGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-AACAGGUU
-AAUA-UUCCUGUGCUUAA----UAUU------ACU------------------------
------------------------------------------------------------
------------------------------------GCGAAGUGGGGACGAAGAA-GGUU
AA-GUUAUCCAG-GU-G----ACGGU----UAUCCUGGU-UUAAAU-GUGUA-----G-G
-----UA-----UG------------------AU-AAU-UAGG-----------------
---CAAAU-CCGAUUAUCU--UU-AAUCUG----AGGCA-U-G-AUG--AC---------
------------------------------------------------------GA----
-AUCAU-UAAGGUGAUGAAG-UAAC-U-GACACCACGCUUC-C-AAGAAA-AGCCUCUAA
GCAU--------------------------------------------------CAGGUA
A-AAUUAAAUCGUACCCCAAACCGACACAGGUG-GUUAGGUA-GAGAAUACUAAGGC-G-
CUUGAG-AGAACCCAG-GUGAAGGAACUAGGC-AAAAUAGUGCCGUAACUUCGG-GAGAA
GGCACG-CUAA-U-GU-UAAGUGAAAGGA----------UUUAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------UCCU-AUA--GCUGAAGUU--AGUCGA
AGAUACCAGCUGGCUGCAA-----CUGUUUAUUAAAAACACAGCACUGUGCAAACACG--
--AA-A-------------GUGGAAGU-AUACGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUCGAAGGAGUCA-AAG----GAAA----CUUAAAGCUCUGAACUGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGAUG--GCCAGGCUGUCUCCACC----UGG-GA
CUCAGUGAAAUUGAAUUUGCUGUGAAGAUGCAGUAUAUCCGCGGCAAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUGACACUGAAUUCUGAAUUUUAAUGUGUAGGAU-AGGU
GGGAGGCCAUG---AAGUUAA-AAC----------------------------GCUA---
-----------------------------------GU-UUUAAUGGAGCC-AA-ACUUGA
AAUA-CCACC-CUUUAAAAUUCGGUAUUCUAACCUAGU--GCCG-U-AAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GC--------------------
--------------------------------------ACAGAGACA-GUGUCUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGAGUAAC-GGAGGAGUACGAAGAUUGGCU
AAUCACGGUCGGACAUCGUGAGGU-UAGUG-CAAAGGCAU-AAGCCAGUUUGACU-GUGA
----------------------------------GCGUGA---UAACGCGAGCAGGUGCG
AAA-GCAGGUCUUAGUGAUCCGGU-----------GGU---UCUGA-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGCAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UGGAAGAUU
GAGGGG-GGC-UGCUUCUAGUACGAGAGGAC-CGAAGUGGACGCAUCAC-UGGUG-UUCG
GGUUGUCAUGCCAAUGGCAU-U-GCCCGGUAGCUAAAUGCGGGAAAGAUAAGCGCUGAAC
GCA-UA--UAAGCACGAAACUUGCCCCAA-G-AUGAAUCUUCC-CU---GAAAC------
-------------AGA-------AAU----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GUU
UACU--GA-AGG----GACGUUGAAGACUACGACGU-UGAUAGGCU-AGGUGUGUAAG-C
AU-A----------------GC----------AA-----------UAUGUUGAGCUA--A
CUAGUACUAAUG--ACCCAAGAG-GCUUAACCUU
>Burkholderia_sp.
G-GUCAAGCGAA--CAAGUGCAUGU-GGUGGAUG-CCUUGGC-GAUCAC---AGGCGAUG
AAGGACGCGG-UAGCCUGCGAAAAGCUACGGGGAGCUGGCAAACAAGCU----UUGAUC-
CGU-AGAUGUCCGAAUGGGGAAACCC---AC----UCC--------------UUUU----
--------------------G---GAGU-A-UCCA-UGG---CUGA--------------
------AUACA--------------------------UA-GGC-CAU-GUGA-AGCGAAC
GCGGUGAACUGAAACAUCUAAGUAACCG--CAGGAAAAGAAAUCAA-CCGAGAUUCCCAA
AGU-AG-UGGCGAGCGAAAUGGGA-U-GA-GCCUU-------------------------
--------------------------------------------GCACU------C-UU-
UA------------------------UUU-----------GU---A-------UUGUU-A
GCCG------AAC-GC-UCUG---------------------------------------
----GAAAG-UGCGG-------CCAUAGCGGGUGAUAGCCCCGUA---------GGCGAA
A--ACAG------U--AUGAA--------GGAACU---AGGU--GUGC----GACAAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-GAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-GUGAUCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAUCCUGAAACCGCAUGCAUACAA-ACAGU-CGG
A---GCCU-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGACGGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-G-UUCAGUAGCAA-GCUUAACC----------GUAUA----------GGGCA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAAUA-------------------------GG-G-CGU
----------------------UCAGUUGCUGGGCGUA-GACCCGAAACC-AAGUGAUCU
AUCCAUGGCCAGGAUGAAGGUGCGGUAACA-CGUACUGGAGGUCCGA--ACCCACUA-AC
GUUGAAAAGUUAGGGGAUGAGCUGUGGAUAGGGGUGAAAGGCUAAACAAACUUGG-AAAU
AGCUGGUUCUCUCCGAAAACUAUUUAGGUAGUGCCUCGU-GUC-----------------
------------------------------------------------------------
--UCA-CCUUCGGGGGUAGAGC-ACUGUCAUGG-UUG--GGGGGUC-U-AU-UG-CAGAU
UACCCCGCCAUAGCAAACUCCGAAUACCGAA-----------------------------
------------------------------------------------------------
----------------------GAGU-GCAA------UCACGGG-AGACAGA-C-AUCG-
G-GUGCUAACGUCCGG-UGUCAAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CCAAAU---A-UAG-CU-AA---GU-GGG-------AAACGAAGUGGGAAGGCUAAAACA
GUCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUGAUC
-----GAGUCGUCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AGCUAUA----------UA
CCGAA-GCUGCGGAUGCGUGCU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------UUGCACG
CA-UGGUAGGAGAGC-GUUCUGU-AAG-CCUGC-GAAGGUG--U-CUCGGAAGGG--A-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-GAGUA-GCGAUA--AAGG-GGGUG
A--A---------------AGGCCC-CCU-CGCCGU-AAGCCC-AAGGUUUCC-UACGCA
ACGUUCAUCGGCGUAGGGUGAGUCGGC-CC-CUAAGGCGAGGCAG-A-A-AUGC----GU
A-----------------------------------------------------------
-------------------------------------GCU-GA-U--GGGA-AGCAGGUC
-AAUA-UUCCUGCACCAUU----GUUA------GAU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGGAUCG-CGGA
AA-GUUGUCCGG-GU-G----UUGGA----AGUCCCGGU-CGCUGC-AU-UG-----G-A
-----GA-----AG------------------GC-GCU-UAGG-----------------
---CAAAU-CCGGGCGCGG----AAUUCAA----GGGUG-U-G-GC---GC---------
------------------------------------------------------GA----
-GCUCC---UUAGGGAGCGA-AGCA-A-UUGGAAGUGGUUC-C-AAGAAA-AGCCUCUAA
GCUU--------------------------------------------------CAGUCU
A-AUGAUGACCGUACCGCAAACCGACACAGGUG-GGCGAGAU-GAGUAUUCUAAGGC-G-
CUUGAG-AGAACUCGG-GAGAAGGAACUCGGC-AAAUUGGUACCGUAACUUCGG-GAUAA
GGUACG-CCCU-U-GU-AGCUUGAUGCCC-----------CUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GGGC-AAA--GGGUGAAGG--GGUUGC
AAUAAACUGGUGGCUGCGA-----CUGUUUAAUAAAAACACAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGAUUAAAUGAUGGGGU----------GCAA----------GCUCUUGAUUGAAGUCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUG--GCCACACUGUCUCCUCC----CGA-GA
CUCAGCGAAGUUGAAGUGUUUGUGAUGAUGCAAUCUACCCGCGGCUAGACGGAAAGA-CC
CCAUGAACC-UUUACUGUAGCUUUGCAUUGGACUUUGAACCGAUCUGUGUAGGAU-AGGU
GGGAGGCUAUG---AAACCGG-AAC----------------------------GCUA---
-----------------------------------GU-UUCGGUGGAGCC-GU-CCUUGA
AAUA-CCACC-CUGGUUUGUUUGAGGUUCUAACCUUGG--CCCG-U-GAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UCGGGGACA-GUGCAUGGUAGG
CAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGCGUAAC-GGAGGAGUACGAAGGUACGCU
AGGUACGGUCGGAAAUCGUGCUGA-UAGUG-CAAUGGCAU-AAGCGUGCUUAACU-GCGA
----------------------------------GACCGA---CAAGUCGAGCAGGUGCG
AAA-GCAGGUCAUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCUGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCUC
AUCCUGGGGCUGUAGCCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGAGGUACGUGA
GCUGGGUUUAAAACGUCGUGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UGGAUAUUU
GAAGGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAACCUC-UGGUG-UACC
GGUUGUCACGCCAGUGGCAU-C-GCCGGGUAGCUAUGUUCGGAAGAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUCGCCUUAA-G-AUGAGAUAUCC-CU---GGGGA------
-------------CU--------AGA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UCC
CCUU--GA-AGG----GUCGUUCGAGACCAGGACGU-UGAUAGGUC-AGGUGUGUAAG-C
GC-A----------------GU----------AA-----------UGCGUUCAGCUA--A
CUGAUACUAAUU--GCCCGUAAG-GCUUGAUCCU
>Caulobacter_crescentus
G-AUCAAGCGCA--UAAGGGCUUCU-GACGGAUG-CCUUGGC-AUUGAG---AGGCGAUG
AAGGACGUGG-CACGCUGCGAUAAGAGCCGGGGAGGCGCGAGCACCCUU-----UGAUC-
CGG-CUAUCUCCGAAUGGGGAAACCC---AC----CUUUA-UGGUCACCCGA-CUAUCGG
UUGAUCA---G----A---CA---AGGU-A-UAAU-GAC---CUGA--------------
------AUACA--------------------------UA-GGGUUCA-U-UA-AGCAAAC
CCGGGGAACUGAAACAUCUCAGUACCCG--GAGGAAAGGACAUCAA-CCGAGACUCCCGU
AGU-AG-UGGCGAGCGAACCGGGA-C-CA-GGCCA-------------------------
----------------------------------------------GUG------C----
UG------------------------UCG-----------UG---A-------CAUAA-A
GCUG------AAU-GU-GUUG---------------------------------------
----GGAAA-CACAG-------CCAUAGUGGGUGAUAGCCCCGUA---------AGCGUC
A--AAUA------G--CGA-------------------------CAGA----CUCGAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-CAUGGGGGG-ACC--ACCCUCCAAGCCUAAG
UA--CUC-CUCAAUGACCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGACAAGGGG-A-GUGAAACAGAACCUGAAAUCGGAAGCCUACAA-GCAGU-CGG
A---GCCA-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------CGCGC------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GU--GGUGACGGCGUACCUUUUGUAUAAUGGGUCAGCGACUUCA
-U-GUGCCGUGCAA-GCUUAAGCC----------GUUA---------GGUGUA--GGCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
---------------------AUAAGUACGUCGCAUGACGACCCGAAACC-AGGUGAUCU
AUCCAUGAGCAGGUUGAAGGUAAGGUAACA-CUUACUGGAGGACCGA--ACCGGUGA-AU
GUUGAAAAAUUCUCGGAUGACUUGUGGAUAGGGGUGAAAGGCCAAUCAAACCUGG-ACAU
AGCUGGUUCUCCGCGAAAACUAUUUAGGUAGUGCCUCGG-ACG-----------------
------------------------------------------------------------
-AAUU-CCUUGGGGGGUAGAGC-ACUGAAUGGA-UGC--GGGCGGC---GC-GA--GCUG
UACCAAUUCUAAUCAAACUCCGAAUACCCAA-----------------------------
------------------------------------------------------------
----------------------GAGA-A-CU------AUCCGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAAAG-GGAAAC---AACCCUAACCAUCAUCUAAGGCCC
CCAAGU--AC-UGG-CU-AA---GU-GGG-------AAACGAUGUGGGUUUGCUUUGACA
ACCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAACAGCUCACUGGUC
-----AAGCGAACCUGCGCGGAAAAUGUAAC-GGGGCUAA-AGCCAGU----------CG
CCGAA-GGUAUGGGUGUGCACU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------CUGUGCA
CG-CGGUAGCGGAGC-GUUCCGU-AAG-CCGAU-GAAGGUG--A-GGCGUGAGCC--U-U
GCUGGAGGUA-UCG-GAAGUGAGAAUGC-UGACAU-GAGUA-GCGAUA--AAGA-GGGUG
A--G---------------AGACCC-UCU-CGCCGA-AAGCCC-AAGGGUUCC-UGCGUA
AAGCUAAUCUGCGCAGGGUUAGUCGGC-CC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AUCAGGUG
-AAUA-UUCCUGAACCAGU----UG-----------------------------------
------------------------------------------------------------
-----------------------------------------GAAGUGACGGAUCU-GGUA
-A-AUUGUCAGG-GC-U----UAUUG----GAUUGCUCC-UG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------GCAGU-G----AAC-AGGUCC-C-UGGAAAUAACUCCA--
------------------------------------------------------------
--ACGGAGACCGUACCCGAAACCGACACAGGUG-GGCAGGUA-GAGUAUACCAAGGC-G-
CUUGAG-AGAACUAUG-CUGAAGGAACUCGGC-AAAUUGCACGCGUAACUUCGG-GAUAA
GCGUGA-CUCU-C-UU--UUGGG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CAA--CCAGAUGAG--AGUGGC
ACAAGCCAGGGGGUAGCGA-----CUGUUUAUCAAAAACACAGGGCUCUGCGAAGCCG--
--CA-A-------------GGCGACGU-AUAGGGUCUGA-CGCCUGCCCGGUGCCU-G-A
AGGUUAAAAGGAGGGGU----------GCAA----------GCUCUGAAUUGAAGCCC--
AGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCACUGUCUCCAGC----AUA-GG
CUCAGCGAAAUUGAAUUCCCCGUGAAGAUGCGGGGUUCCCGCGGUCAGACGGAAAGA-CC
CUAUGAACC-UUUACUGCAGCUUCGCCUUGGCGUUAGCAGCAACAUGUGUAGGAU-AGGU
GGGAGGCUAUG---AAACUCG-GGC----------------------------GCCA---
-----------------------------------GU-UCGAGUGGAGCC-AU-CCUUGA
AAUA-CCACC-CUUAUUGUUGCUGACGUCUAACCGCGG--CCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UCCGGGACA-UGGCGUGGCGGG
CAGUUUGACUGGGGCGGU-CGCCUCCCA-AAGUGUAAC-GGAGGCGCGCGAUGGUGGGCU
CAGACCGGUCGGAAAUCGGUCGUC-GAGUG-CAAUGGCAU-AAGCCCGCCUGACU-GCGA
----------------------------------GACUGA---CAAGUCGAGCAGAGACG
AAA-GUCGGCCAUAGUGAUCCGGU-----------GGU---CCUGC-GUG----------
----------GAAGGGCCAUCGCUCAACGA-AUAAAAGGUACUCUAGGG-AUAACAGGCU
GAUUUUGCCCAAGAGUCCAUAUCGACGGCAAAGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUUCGGCUGUUCGCCGAUUAAAGUGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GUGU-ACGAGACUU
GAGAGG-AUC-UGUCCCUAGUACGAGAGGAC-CGGGAUGGACACACCUC-UGGUG-GACC
UGUCAUGGCGCCAGCUGUGC-A-GCAGGGUAGCUAAGUGUGGAAUAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUAACCUCAA-A-ACAAGGUCUCG-C---------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGA----GCCGUGGAAGACCACCACGU-UGAUAGGCC-GGGUGUGGAAG-U
GC-G----------------GU----------GA-----------CGCAUGGAGCUU--A
CCGGUACUAAUA--GCUCGAUAG-GCUUGAUCGU
>Chlamydophila_caviae
G-ACCAAGUUGU--UAAGAGCUAUU-GGCGGAUG-CCUUGGC-AUUGAC---AGGCGAUG
AAGGAUGCGU-UUACCUGCAGUAAUCUUCGGCGAGCUGGUAUAAAGCUA-----UGACC-
CGG-AGGUAUCCGAAUGGGGUAACCC---GG----UAGAU-U-----------AAU----
------C---G----U----C---UACC-A-UUAU-AUA---CUGA--------------
------AUACA--------------------------UA-GGU-AUA-U-AAAGCGACAC
CUGCUGAACUGAAACAUCUUAGUAAGCA--GAGGAAAAUAAAUCAA--AGAGAUUCCCUA
AGU-AG-CGGCGAGCGAAAGGGGA-G-AA-GACCAAACCACG---CCUU-----------
--------------UGG-UGUGGGG--UUG------------UAGGGUC------GAUAA
CA----------------------UGAGA---------UCUU--AA-------GUUUU-A
GUUG------AAUACU-UCUG---------------------------------------
----GAAAG-UAGAA-------CGAUACAGGGUGAUAGUCCCGUA---------AACGAA
A--GAAC------A--AGAGA----------CUCU---AUUC--GAUG----CCUGAGUA
GGGCUAGACACGUGAAACCUAGUCUGAA-UCUGGGGAG-ACC--ACUCUCCAAGUCUAAA
UA--CUA-GUCAAUGACCUAUAGU-GAAC-C-AGUACUGUGAAGGAAAG-GUGAAA-AGA
AC-CCUUGUUAAGGG-A-GUGAAAUAGAACCUGAAACCAGUAGCUUAUAA-GCGGU-CGG
A---GACC-U---AU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AG-CUUC-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CUCG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------GAAGC-----
--------------CAUG--GUUGACGGCGUGCCUUUUGCAUGAUGAGCCAGGGAGUUAA
-G-UUAAACGGCGA-GGUUAAGGGAU--------CUAC-------AUUCCGGA--GCCGA
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUUU--------------
----------------------UAAUA-------------------------GA-G-CGU
----------------------AUAGUCGUUUGAUUUA-GACACGAAACC-AAGUGAGCU
AUUUAUGACCAGGUUGAAGCAUGGGUAAGA-CCUUGUGGAGGACCGA--ACCAGUAC-AU
GUUGAAAAAUGUUUGGAUGAGUUGUGAAUAGGGGUGAAAGGCCAAUCAAACUUGG-AGAU
AUCUUGUUCUCUCCGAAAUAACUUUAGGGUUAGCCUCGG-AUA-----------------
------------------------------------------------------------
-UUAAGCUUUUGGGGGUAGAGC-ACUGAAUUCU-AGC--GGGGGCC---UA-CC--GGCU
UACCAACGGAAAUCAAACUCCGAAUACCAAA-----------------------------
------------------------------------------------------------
----------------------A--G-C-GA------GUCCGGG-AGAUAGA-C-AGCG-
G-GGGCUAAGCUUCGU-UGUCGAGAG-GGGAAC---AGCCCAGACCGCCGAUUAAGGUCC
CAAAUU--UU-AUG-CU-AA---GU-GAG-------UAAGGAAGUGAUGAUUCUAAGACA
GUUGGAAUGUUGGCUUAGAGGCAGCAA-UCAUUUAAAGAGUGCGUAACAGCUCACCAAUC
-----GAGAAUCAUCGCGCCAAUAAUA-AUC-GGGGCUCA-AGCAUAA----------AA
CCGAC-AUCGCGGGUGUAUAUU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------UAUAUAUA
CG-CGGUAGGAGAGC-GUAGUAU-UCA-GCAGU-GAAGGUA--U-ACCGUAAGGA--G-U
GCUGGAGCGG-AUA-CUAGUGAAGAUCCAUGGCAU-AAGUA-ACGAUA--AAGG-AAGUG
A--A---------------AAUCUU-CCU-CGCCGU-AAGCAC-AAGGUUUCC-AGGGUC
AAGCUCGUCUUCCCUGGGUUAGUCGGC-CC-CUAAGUCGAGGCAC-A-A-AUGC----GU
A-----------------------------------------------------------
-------------------------------------GAC-GA-U--GGAGCAACAGGUU
AAAUA-UUCCUGUACCACC----UAAA------AC-----------UUUA----------
------------------------------------------------------------
------------------------------------GCAAUGGAAUGACGGAGUA-CGUU
AA-GCACGCGGA-CG-A----UUGGA----AAUGUCCGU-AUCACA-AUGA------G-A
-----C------UG------------------GU-UAG-UAGG-----------------
---UAAAU-CCGCUAACAU----AAGGUUA----GGUUG-U-G-GUUAAGG---------
------------------------------------------------------GA----
-AAUCUUCGGAGGAACUGAU-GGUG-U-AGCGCAAUGCUUU-C-AAGAAAUAAUUUCUAG
CU-------------------------------------------------------GUU
G-AUGGUGACCGUACC-UAAACCGACACAGGUG-UGCGAGAU-GAGUAUUCUAAGGC-G-
CGCGAG-AUAACUUUC-GCUAAGGAACUCGGC-AAAUUAUCCCCGUAACUUCGG-AAGAA
GGGGAG-CCUU-C-UA--GGGUGAUUACC----------UUUUC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GGUA-UGA--GCCCCGGGA--GGCCGC
AGAGAAAUGGCCCAGGCGA-----CUGUUUAACAAAAACACAGCACUAUGCAAACCUC--
--UA-A-------------GGGGAAGU-AUAUGGUGUGA-CGCCUGCCCAAUGCCA-A-A
AGGUUAAAGGGAUAUGUCA-GCC----GUAA----GGCAAAGCAUUGAACCCAAGCCC--
UGGUGAAU-GGCCGCCGUAACUAUAACGGUGCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGUGUAACGAUC--UGGGCACUGUCUCAGCG----AAA-GA
CUCGGUGAAAUUGUAGUAGCAGUGAAGAUGCUGUUUACCCGCAAAAGGACGAAAAGA-CC
CCGUGAACC-UUUACUGUACUUUGGUAUUGAUUCUUGAUUUGUUAUGUGUAGCAU-AGCC
AGGAGACUGUG---AACACUC-UUC----------------------------GUCA---
-----------------------------------GG-AGAGUGGGAGUC-AU-CGUUGA
AAUA-CUGGU-CUUAACAAGUUGGGAGUCUAACAUAAU--UCCA-UGAAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GA--------------------
--------------------------------------AUAUGGACA-UUGCCAGACGGG
CAGUUUUACUGGGGCGGU-AUCCUCCUA-AAAAGUAAC-GGAGGAGCCCAAAGCUUAUUU
CAUCGUGGUUGGCAAUCACGAGUA-GAGCG-UAAAGGUAU-AAAAUAGGUUGACU-GCAA
----------------------------------GACCUA---CAAGUCAAGCAGAGACG
AAA-GUCGGGCUUAGUGAUCCGGC-----------GGU---GGAAA-GUG----------
----------GAAUCGCCGUCGCUUAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUCGCCACCAAGAGUUCAUAUCGACGUGGCGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGGAGAAGGUCCCAAGGGUUUGGCUGUUCGCCAAUUAAAGCGGUACGCGA
GCUGGGUUCAAAACGUCGUGAGACAGUUUGGUCUCUAUCCUUU-----------------
---G-UGG--------------------------------------GCGC-AGGAUACUU
GAAAGG-AGC-UGUUCCUAGUACGAGAGGAC-CGGAAUGGACGAACCAA-UGGUG-UGUC
GGUUGUUUUGCCAAAAGCAU-A-GCCGAGUAGCUACGUUCGGAAAGGAUAAGCAUUGAAA
GCA-UC--UAAAUGCCAAGCCUCCCUUAA-G-AUAAGGUAUCC-CU---A----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGA----CUCCAUAUAGACUAUGUGGU-UGAUAGGUU-GGGUGUGUACG-C
AC-A----------------GU----------AA-----------UGUGUUUAGCUA--A
CCAAUACUAAUA--AGUCCAUUG-ACUUGGUUUU
>Chlorobium_tepidum
---UUAAGUUAC--UAAGGGCGUAC-GGUGGAUG-CCUUGGC-ACAAGA---AGGCGAUG
AAGGACGUGGUUUAACUGCGAAAAGCUGCGGGGAGGCGUAAACAGCCUG-----AUAUC-
CGC-AGAUCUCCGAAUGGGGCAACCCA--CC----UC---------------GAUU----
------------------------GAGG-AAUCCC-------------------------
------GUAAU-----------------------------------G-G-GA-GGCUAAC
CCAGGGAAGUGAAACAUCUCAGUACCUG--GAGGAAAAGAAAACAA-AAGUGAUUUCCUG
AGU-AG-UGGCGAGCGAAAAGGAA-C-AA-GCCCAAACCGGUGCCUGUUUCG--------
------------G-CAGCGCCGGGG--UUG------------UAGGACU------CCAG-
CA----------------------CGUGA---------CAGC--GA-------GCGAU-A
GCAG------AAC-UA-CCUG---------------------------------------
----GAAAG-GUAGG-------CCAAAGAAGGUGAAAGCCCUGUA---------AGCGAA
A--UCGC------A--AACUG-----------CAC---AGGA--GGAU----CCUGAGUA
GCACGGGGUACGUGAGGUCCUGUGUGAA-CCAGCGAGA-ACC--AUCUCGUAAGGCUAAA
UA--CUC-UCUUGUGACCGAUAGU-GAAC-A-AGUACCGUAAGGGAAAG-GUGAAA-AGU
AC-CCUUAAGAAGGG-A-GUGAAAUAGUACCUGAAACCGUACGCUUACAAAACUGU-AGG
A---GCUA-A---CC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CA-C--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------GUG----
---------------GGG--UGUGACUGCGUGCCUUUUGCAUAAUGAGCCUACGAGUUAC
UG-GUGUGUUGCGA-GGUUAAGGUU--------UUCAG--------AACCGGA--GCCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUUC--------------
----------------------GAACA-------------------------GA-G-CGG
-----------------------GAGUAACAUGCCGUA-GACGCGAAACC-AGGUGAUCU
AUCCUUGAUCAGGAUGAAGUAUGGGUAAAA-CCAUAUGGAGGUCCGA--ACCAGUGU-GG
GUUGAAAACCGCUUGGAUGAAUUGAGGAUAGGGGUGAAAGGCCAAUCAAACUUGG-UGAU
AGCUCGUACUCCCCGAAAUGUCUUGAGGGACAGCCUCGG-GGUC----------------
------------------------------------------------------------
-GAGU-CUGCCGGAGGUAGAGCUACCAAUUGGG-CUA--GGGCUGU---CA-CA--ACGG
UACCAAACCCAGAUGAACUCCGAAUGCCGGU-----------------------------
------------------------------------------------------------
----------------------AUGA-C-AU------ACCCGGG-AGUGAGG-G-CAUG-
A-GCGAUAAGGUCCAU-GUCCGAGAG-GGAAAC---AACCCAGAGCCACAGCUAAGGCCC
CCAAAU--UC-ACG-CU-AA---GU-GUAU-----UAAAGAUUGUUUGAUUGCCCAGACA
GCUAGGAUGUUGGCUUAGAAGCAGCCA-CCAUUUAAAGAGUGCGUAAUAGCUCACUAGUC
-----AAGCGAUCAUGCGUCGAUAAUA-CUC-GGGACU-A-AGCGUGG----------UG
CCGAA-GCUUGGUGAUUUCUUU--------------------------------------
------------------------------------------------------------
------------AGGCUA------------------------------------------
------------------------------------------------CGGUCUAAAUGA
AU-CGGUAGGGGAGC-AUUCCAG-U-U-GCGUU-GAAGGUG--A-GUGGUAACGC--U-U
GCUGGAGCGG-CUG-GAAACGAACAUGU-AGGCAU-GAGUA-GCGAUA--AACA-AAGUG
A--G---------------AAACUU-UGU-CACCGA-AAAUCU-AAGGUUUCC-UGAGCA
AUGUUAAUCAUCUCAGGGUUAGUCGGG-AC-CUAAGGUGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GCC-GA-U--GGAA-AACUGGUU
-AAUA-GUCCAGUACCCAA----UCAU------GAA----------GGUUAUUA------
------------------------------------------------------------
------------------------------------CCUAUGGGGUGACGCAGAAGUGAA
AG-GAGAGCCAC-CG-G----ACGGA----AGUGGUGGU-UUAAGU-GCGUA-----G-G
-----C------UG------------------AA-GCG-UAGG-----------------
---CAAAU-CCGCGCUUCA--UCAAGGCCG----AAAAA-C-G-AAC--AG---------
------------------------------------------------------GG----
-CGCUCGUAAGAGCCACAAC-UCUC-C-CUAAUCCAGCUGC-C-GAGAAA-AGCCUCUCU
GGGA---------------------------------------------------CGACA
U-GACUGGCCCGUACCGUAAACCGACACAGGUA-GAUGGGAU-GAGUAUUCUAAGGU-G-
CUCGAG-UGAGACGCA-GCUAAGGAACUCGGC-AAAAUAGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUA-G-AU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------UUUCUA--GGCCGC
AGUGAAAUGGGUCAAGCGA-----CUGUUUAACAAAAACACAUCUCUCUGCCAAGACGA-
UUUA-A-------------GUCGAUGU-AUAGGGAGUGA-CACCUGCCCGGUGCUG-G-A
AGGUUAAGGGGAUCUGUCA-GC-----GCAA-----GUGAAGCAGUGAACCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGUGUAACGAUU--UGACCACUGUCUCGGCU----GCG-CG
CUCGGCGAAAUUGUAGUGCCGGUGAAGAUGCCGGCUACUCGCAUCUGGACGGAAAGA-CC
CUAUGCACC-UUUACUAUAACCUGGCAUUGGGCUUGAGCAUGAUUUGUGUAGAAU-AGGU
GGGAGACUUUG---AAGCGGG-GAC----------------------------GUCA---
-----------------------------------GU-UUCCGUGGAGUC-GCAAUGUGA
AAUA-CCACC-CUGGUUGUGUUUGAGUCCUAACCUCGA--CGAG-CAAAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CU----CG--------------------
--------------------------------------UCAGGGACC-AUGUCAGGCGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAAGUAAC-GGAGGCUUGCAAAGGUUCACU
CAGUUCCGUCGGUAAUGGAACGUA-GAGCA-UAAUGGUAG-AAGUGAGCUUGACU-GUGA
----------------------------------GACCGA---CAGGUCGAGCAGGAACG
AAA-GUUGGCCAUAGUGAUCCGGU-----------GGU---CCCGC-AUG----------
----------GAAGGGCCAUCGCUCAUAGG-AUAAAAGGUACGCUAGGG-AUAACAGGCU
GAUCCCCGCCGAGAGUUCAUAUCGACGUGGGGGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGGAGAAGGUCCCAAGGGUCCGGCUGUUCGCCGGUUAAAGUGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGAU-----------------
---G-CGA--------------------------------------GCGC-AGGAAAUUU
GAGAGG-GCU-UGUCCUUAGUACGAGAGGAC-CGGGACGAACAAACCUC-UGGUG-CACC
AGUUGUCACGCCAGUGGCAU-G-GCUGGGUAGCUAUGUUUGGUUGAGCUAAGCGCUGAAA
GCA-UC--UAAGUGCGAAACUCGCCUCAA-G-AUGAGAUUUCC-CC---A----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UC-AGG----CUCCAGGAAGAUGACCUGGU-CGAUAGGCU-ACAGGUGUACG-C
AC-A----------------GU----------AA-----------UGUGUUUAGCCG--A
GUAGUACUAAUA--AGCCGAUCG-ACUUAACCAU
>Coxiella_burnetii
G-GUCAAGUGAA--UAAGCGCAUAU-GGUGGAUG-CCUUGGC-AGUAAG---AGGCGAUG
AAGGACGUAG-UAGCCUGCGAUAACUUCGGGGAGCUGGCAAACAAGCGA-----UGAUC-
CGG-ACAUUUCCGAAUGGGGAAACCC---AA----CC---------------UUUC----
--------------------G---AGGU-UAUGUA-UAC---UGA---------------
------AUUCA---------------------------U-AGG-UAU-A-CGAGGCGAAC
CUGGGGAACUGAAACAUCUAAGUACCCA--GAGGAAAAGAAAUCAA-CCGAGAUUCCGUC
AGU-AG-CGGCGAGCGAAAG---A-A-CA-GCCCA-------------------------
--------------------------------------------GUUAC------UAAA-
UC-----------------------AUUA-----------UU---U-------GUUCU-A
GCAG------AAU-GU-UCUG---------------------------------------
----GAAAG-UUCAG-------CCAUAGCGGGUGAUAGCCCGGUA---------CCCGAA
A--GAGU------A--AAUAA-----------UGU----GGG--UAAC----GAUGAGUA
GGUCGGGACACGUGGUAUCUUGACUGAA-CAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUUACUGACCGAUAGC-GAAC-C-AGUACCGUGAGGAAAGG-UGAAAA-AGA
AC-CCCGG-CGAGGG-A-GUGAAAUAGAACCUGAAACCGUAUGCGUACAA-GCUGU-AGG
A---GCAU-U---UC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUCG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------GAAA--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-U-UGUUGUAGCGA-GCUUAACC----------GUCUA----------GGGGA--GGCGU
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAAAU-------------------------GG-G-CGU
----------------------UUAGUUGCAACGAGUA-GACCGAACCCG-AAGCGAUCU
AUCUAUGGCCAGGGUGAAGGUCAGGUAACA-CUGACUGGAGGCC--G--AACCACUA-AU
GUGAAAAAGUUAGGGGAUGAGCUGUGGAUAGGAGUGAAAGGCUAAUCAAGCUCGG-AGAU
AGCUGGUUCUCCUCGAAAGCUAUUUAGGUAGCGCCUCGU-GUA-----------------
------------------------------------------------------------
--UGA-CUCUUGGGGGUAGAGC-ACUGUUUCGG-CUA--GGGGGCC---AUCCC--GGCC
UACCAAACCGAGGCAAACUCCGAAUACCAAG-----------------------------
------------------------------------------------------------
----------------------AAGU-UUUA------GCACGGG-AGACACA-C-UGCU-
GGGUGAUAAGGUCCGU-GGUGGAAAG-GAACGCCAGAUCGCCAGAUCGCAGCUAAGGUCC
CAAAUA--CA-CGU-----A---GU-GG--------AAACGAUGUGGGAAGGCUCAGACA
GCCAGGACCUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCCUAAUAGCUCACUGGUC
-----GAGUCGUCCUGCGCGGAAGAUUUAAC-GGGGCUCA-AACUGUG----------UA
CCGAA-GCUGCGG-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----GGUAGAGGAGC-GUUCUGU-A-A-CCUGU-GAAGGUG----AUCGAGAGGU--U-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAUAAAGUA-ACGAUA--AUGU-GGGUG
A--A---------------AAACCC-ACA-CGCCGA-AAGUCU-AAGGUUUCC-UGCGC-
-CGUUAAUC--CGCAGGGUGAGUCGGC-CC-UAAGGGAGGA---G-A-A-A-UC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACGGGUU
-AAUA-UUCCCGUACUUUA----UAAU------ACU------------------------
------------------------------------------------------------
----------------------------------GCGAUGGGGGGGGACGGAGAA-GGCU
AG-GUCAGCCCC-CC-G----AUGGU----UGUGGUGGG-CUAGUC-AGCCACCGAUGUG
-----UG-----UGUGUUAAGUGAUGUGUAGAAA-GGA-UCUU-----------------
---CAAAU-CCGGAACUCA-----AUUCCG----AGACA-U-G-AUG--AC---------
------------------------------------------------------GA-GUA
CGAACUUGUUCGUGCAAAGU-GAUU-G-AUGCCACGACUUC-C-AGGAAA-AGUCCCUAA
GCUU--------------------------------------------------CAGGUA
U-UGUAAAACCGUACUAUAAACCGACACAGGUG-GACAGGUA-GAGAAUACCAAGGC-G-
CUUGAG-AGAACUUGG-GUGAAGGAACUAGGC-AAAAUGGCACCGUAACUUCGG-GAGAA
GGUGCGCCCUU-G-GU--AAGUGAAGGUC----------CUUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GACU--GA--GCU--GAAA--GGUUGC
AGAUACCAGGUGGCUGCGAAAGACUAGUUUACUAAAAACACAGCACUCUGCAAACUCG--
--UA-A-------------GAGAGCGUAAUAGGGUGUGAGCGCCUGCCCGGUGCCG-GAA
AGGUUAAGUGAUGGGGUUA-GCC----CUCG----GGCGAAGCUCUUGAUCGAAGCCC--
CGGUAAACGGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCAGU-GA
AGUUCCGACCUGCACGAAUGGCGUAACGAUA--GCCACGCUGUCUCCACC----CAA-GA
CUCAGUGAAAUUGAAAUCGCUGUGAAGAUGCAGCGUACCCGCGGCUAGACGGAAAGA-CC
CCGUGAACC-UUUACUACAGCUUUACACUGAACUUUGAAUAUGCCUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGCUGG-AGC----------------------------GCUA---
-----------------------------------GC-UCCAGUGGAGCC-AA-CCUUGA
AAUA-CCACC-CUGGCGUGUUUGAGGUUCUAACCCUGU--CCCG-U-AAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UCGGGAACA-GUGUAUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCUA-AAGAGUAAC-GGAGGAGUACAAAGGUACCCU
CAGCACGGUCGGAAAUCGUGCAUU-GUGUG-CAAAGGCAU-AAG-GUGCUUGACU-GCGA
----------------------------------GACGUA---CAAGUCGAGCAGGUACG
AAA-GUAGGUCUUAGUGAUCCGGU-----------GGU---CCUUU-AUG----------
----------GAAGGGC--ACGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCACCCAAGAGUUCAUAUCGACGGUGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGUAGCCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGUGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---GUUGG--------------------------------------GCGU-UGGAGAUUU
GAGAGG-AGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGUACCUC-UGGUG-UUCC
GGUUGUCACGCCAGUGGCAU-UUGCCGGGUAGCUAAGUACGGACGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACCC-CCUCAA-G-AUGAGAUCUCC-GG---ACCUU------
-------------U-----------A----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AGG
UCCU--AA-AGA----UUCGUUGAAGACGACAACGU-UGAUAGGCA-GGGUGUGGAAGUC
UC-A----------------GU----------AA-----------UGAGUGAAGCUA--A
CCUGUACUAAUU--AAUCGUGCG-ACUUGACUAU
>Crocosphaera_watsonii
C-------------AAAGGGCUAAC-GGUGGAUA-CCUAGGC-ACACAG---AGGCGAAG
AAGGACGUAG-UUACCGACGAUACGCUCCGGGGAGCUGGAAGCAAGCAU-----UGAGC-
CGG-AGAUUUCCCAAUGGGGCAACCC---CA-----------------------------
--------------------------AGAA-CGGU-CAC---CUGA--------------
------AUCUA--------------------------UA-GGG-UGA-UGCG-AGCGAAC
UGGGCGAACUGAAACAUCUUAGUAACCC--AAGGAAGAGAAAGCAA-AAGCGAUUCCCCU
AGU-AG-CGGCGAGCGAAGAGGGA-C-AA-GCCUAAACCAUC---GACUAAG--------
--------------GUU-GAUGGGG--UUG------------UGGGACA------GUGA-
CG----------------------UGGAC---------UGUA---G-------CGGUU-A
AACG------AAG-CA-GCU----------------------------------------
----GAAAA-CUGCA-------CCAGAGAAGGUGAAAGUCCUGUA---------GUUGAA
A--ACUU------A--AGCAG-----------CCU---AACU--GUAU----CCCGAGUA
GCACGGAGCCCGUGGAAUUCCGUGUGAA-UCAGCGAGG-ACC--ACCUCGUAAGGCUAAA
UA--CUC-CUGUGUGACCGAUAGA-GAAA-C-AGUACCGCGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-AAGGGG-A-GUGAAAUAGAACAUGAAACCGUUAGCCUACAA-GCAAU-GGG
A---GGAC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------AUUUAA-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------CG--UCUGACCGUGUGCCUGUUGAAGAAUGAGCCGGCGACUUAC
-A-GGCUGUGGCA--GGUUAAAUG---------GGAUG---------ACCGAA--GCCAA
AGUGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGCCU--------------
----------------------GACAA-------------------------GG-G-CGA
-----------------------UAGUCACAGUUUGUA-GACCCGAACCC-GGGUGAUCU
AACCAUGGCCAGGAUAAAGCUAGGGUAAUA-CCUUGUGGAGGUCCGA--ACCGACUU-CU
GUUGAAAAAGGAGCGGAUGAGCUGUGGUUAGGGGUGAAAUGCCAAUCGAACCCGG-AGCU
AGCUGGUUCUCCCCGAAAUGCGUUUAGGCGCAGCGGUUG-UGU-----------------
------------------------------------------------------------
-ACCU-UAUGGGGGGGUAAAGC-ACUAUUUCGC-UGC--GGGCUGC---GA-GA--GCGG
UACCAAAGCGAGAUAAACUCAGAAUACCCUG-----------------------------
------------------------------------------------------------
----------------------U--A-A-GC------AUCAACC-AGUGAGA-C-GGUG-
G-GGGAUAAGCUUCAU-CGUCGAAAG-GGAAAC---AGCCCAGACCACCAGCUAAGGUCC
CCAAAU--AA-AUA-CU-AA---GU-GAU-------AAAGGAGGUGGGAGUGCAUAGACA
ACCAGGAGGUUUGCCUAGAAGCAGCAA-UCCUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----AAGCGCUCCUGCGCCGAAAAUG-AAC-GGGGCU-A-AGUAUUU----------UA
CCGAA-GCUGUGGACUUAAUUA--------------------------------------
------------------------------------------------------------
--------------UUAA------------------------------------------
------------------------------------------------UUGUUAAUUAUU
AA-UUGUAGGGGAGC-GUUCUGU-A-U-AGGGU-GAAGCAC--UAGCGGCAAGCA--G-G
UGUGGACAGU-ACA-GAAGUGAGAAUGU-CGGCUU-GAGUA-GCGAAA--AUAU-AUGUG
A--G---------------AAUCGU-AUA-CCCCGA-AAUCCU-AAGGGUUCC-UCCGGA
AGGCUCGUCCGCGGAGGGUUAGUCGGG-AC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAA-ACAAGGUU
-AAUA-UUCCUUGACUGUG----AUGA------GGG------------------------
------------------------------------------------------------
------------------------------------AGUUUUUAGGGACGCAUGA-CGAU
UA-GUCAUACCC-UG-A----AUGGA----UUGGGAGGA-GACUAC-GGUCU--------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------CUG-CAUG-A-UGAACAAUAGUGC-C-AAGAAA-AGCUAAUAA
ACGU--------------------------------------------------UGAACU
C-AUGACACUCGUACCCGAAACCGACACAGGUA-GGAAGGUA-GAGAAUACUAAGGG-G-
CGCGAG-AUAACUCUC-UCUAAGGAACUCGGC-AAAAUGACCCCGUAACUUCGG-GAGAA
GGGGUG-CCAC-C-GA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGGU--GGUCGC
AGUGAAUAGGCCCAGGCGA-----CUGUUUACCAAAAACACAGGUCUCUGCCAAGUCG--
--UA-A-------------GACGCAGU-AUAGGGGCUGA-CGCCUGCCCAGUGCCG-G-A
AGGUUAAGGAAGUUGGUUA-GU-----UUCG-----ACGAAGCUAGCGACCGAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGCGUAACGAUC--UGGGCACUGUCUCGGAG----AGA-GG
CUCGGCGAAAUAGGAUUGUCUGUGAAGAUACGGACUACCUGCACCUGGACAGAAAGA-CC
CUAUGAAGC-UUUACUGUAGCUUGGAAUUGGGUUCGGGCUUCCUUUGCGCAGCAU-AGGU
GGGAGGCGUUG---AAGUUUU-CCU----------------------------CGUG---
-----------------------------------GG-GAGAAUGGAGCC-AA-CGGUGA
GAUA-CCACU-CUAGGGAGGCUAGAAUUCUAACUUAAG--CCCG-U-AAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UUAAGAACA-GUUUCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGCGCGCAAAGGUUCCCU
CAGGCUGGUUAGAAAUCAGCCGCA-GAGUG-CAAAGGCAG-AAGGGAGCUUGACU-GCGA
----------------------------------GACAAA---CAAGUCAAGCAGGGACG
AAA-GUCGGCCUUAGUGAUCCGAC-----------GGC---ACCGA-GUG----------
----------GAAGGGCCGUCGCUCAACGG-AUAAAAGUUACUCUAGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUUCAUAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AGCCUGGGGCUGUAGUAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGU-----------------
---G-UAG--------------------------------------GCGU-AAGAGCAUU
GAGAGG-AGC-CUUCCUUAGUACGAGAGGAC-CGGGAAGGACGCACCGC-UGGUG-UACC
UGUUAUCGUGCCAACGGUAA-ACGCAGGGUAGCCAAGUGCGGAGCGGAUAACCGCUGAAA
GCA-UC--UAAGUGGGAAGCCCACCUCAA-G-AUGAUUGCUCU-CA---CAGGG------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAC
CUGG--UA-AGG----UCACGGGAAGACCACC-CGU-UAAUAGGCA-CUCGGUGGAAG-U
CC-A----------------GC----------AA-----------UGGAUGAAGCCA--A
GGUGUACUAACA--GACCGAG-G-GCUUGACCU-
>Cytophaga_hutchinsonii
A--GAAAAUAAA--UAAGGGCGUAU-GGGGAAUG-CCUAGGC-UCUCAG---AGGCGAAG
AAAGACGUGC-CAAGCUGCGAAAAGUUACGGGGAUCUGCUGAGGAGAUU-----UGAUC-
CGU-AAAUGUCUGAAUGGGGCAACCU---GG----UAUGU-U-----------GAA----
------G---A----C----A---UAUC-G-ACCA-------------------------
------GCAA------------------------------------U-G-GU-AGCGAAC
CCGGUGAACUGAAACAUCUAAGUAACUG--GAGGAAGAGAAAAUAACUAAUGAUUCCCUA
AGU-AG-UGGCGAGCGAACAGGGA-A-GA-GCCCAAACCAAUG-UUGUUACG--------
------------G-CAAUAUUGGGG--UUG------------UAGGACC------GCAU-
U-----------------------UAAGA---------GAAG---U-------AAUUGAA
CUGG------AAA-UG-UCUG---------------------------------------
----GGAAG-GCAUG-------CCAUAGCGGGUGAGAGCCCCUUA---------CAGGUA
A--GAUU------A--UCAUU-------------U--GAGCG--GUAU----CCUGAGUA
GGGCGGGACCGGAGAAAUCCCGUUUGAA-ACUGCCGGC-ACC--AUCCGGUAAGGCUAAA
UA--CUC-CUGAGAGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGU
AC-CCUGAAUAAGGG-G-GUGAAAUAGAACCUGAAACCAUACGCUUACAA-GCGGU-CGG
A---GCCC-U--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UAAU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGACGGCGUGCCUUUUGCAUAAUGAUCCUACGAGUUAC
UC-CUCACUGGCAA-GGUUAAGCACU--------UUUA-------GGUGCGUA--GCCGG
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGC
----------------------GUAGUCAGUGGGGGUA-GACGCGAAACC-UUGUGAUCU
ACCCAUGGCCAGGAUGAAGUUGCAGUAACA-UGCAAUGGAGGUCCGA--ACUGGUAA-AC
GUUGAAAAGUUUUCGGAUGAGCUGUGGGUAGGGGUGAAAGGCUAAUCAAACUGGG-AAAU
AGCUCGUACUCCCCGAAAUGUAUUUUGGUACAGCGUCGG-GGUA----------------
------------------------------------------------------------
-AAGU-UUAGCGGAGGUAGAGCUACCAAUAGGA-CUA--GGGGGAG---UC-AA--AUCC
UACCAAAUCCUGAUGAACUCCGAAUGCCGCU-----------------------------
------------------------------------------------------------
----------------------AAAU-A--U------ACCCGGC-AGUGAGG-G-CUUG-
G-GUGCUAAGGUCCAA-GUCCGAGAG-GGAAAG---AACCCAGACUAACAGCUAAGGUCC
CAAAAU--CU-AUC-CU-AA---GU-UGAA-----CAAAGGAGGUCCAGUUGCAGAGACA
GCCAGGAUGUUUGCUCGGAAGCAGCAAUUCAUUUAAAGAGUGCGUAACAGCUCACUGGUC
-----GAGCGACAGGGCAUCGAUAAUA-AAC-GGGCAUCA-AGGGUAG----------UA
CCGAA-GCUUUAGAUUUAUACU--------------------------------------
------------------------------------------------------------
--------------U---------------------------------------------
----------------------------------------------------UAGGAGUA
AG-UGGUAGGGGAGC-AUUCCAA-G-G-CCGGU-GAAGGCG--A-AACGCGAGUU--U-U
GCUGGAGGGC-UUG-GAAAAGCAAAUGU-AGGAAU-AAGUA-ACGAUA--AUAA-GGGUG
A--G---------------AAUCCC-UUA-CACCGA-UAGACU-AAGGUUUCC-UGAUCA
ACGUUCGUCGGAUCAGGGUUAGUCGGG-AC-CUAAGGCAAAUCCG-----UGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-AACUGGUU
-AAUA-UUCCAGUACUUGU----GUAU------ACU------------------------
------------------------------------------------------------
------------------------------------GCUAUGGAGAGACGGAGUAGUGAA
AA-GUUCGCCUG-GU-G----ACGGA----AUACCAGGU-UAAAAC-CCGUA-----G-A
-----UA--U-AUU------------------UU-GAG-UAGG-----------------
---CAAAU-CCGCUCGAGA-----UGUCGA----AGGUG-A-U-AGU--AC---------
------------------------------------------------------AACAA-
AGCUUCGGCAGCGUUGAUAG-UGAC-U-GUAAACAGACUUC-C-AAGAAA-AUCUUCUAU
GCUU--------------------------------------------------CAGGUA
U-AUACGACCCGUACCGCAAACCGACACAGGUA-GUCAAGGA-GAGAAUCCUGAGGU-G-
CGCGAG-UGAUUCACG-GCUAAGGAACUCGGC-AAAUUAACCCUGUAACUUCGG-GAGAA
GGGGUG-CUUCCU-CU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------A--GCGAUGAGA--AGCCGC
AGUGAAAAGUCUCAGGCGA-----CUGUUUAACAAAAACACAUGGCUCUGCGAAAUCG--
--AA-A-------------GAUAAAGU-AUAGGGCCUGA-CACCUGCCCGGUGCCG-G-A
AGGUUAAGAGGGGGGCUUA-GC-----GUAA-----GCGACGGUCUGAAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGUGUAACGAUC--UGAGAACUGUCUCAGCC----GUG-AG
CUCGGUGAAAUUGUAGUAGCGGUGAAGAUGCCGCUUACCCGUCACGGGACGGAAAGA-CC
CCGUGCACC-UUUACUAUAGCUUUGCAUUGAUUUUGGGUAAAUGAUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGCGGG-UAC----------------------------GCUA---
-----------------------------------GU-AUUCGUGGAGCC-AA-CGUUGA
AAUA-CCACC-CUUUAUUUACUUGGAGUCUAACCC-CU---------GAAU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------AGGGAAACA-GUGCAUGGUGGG
UAGUUUGACUGGGGUGGU-CGCCUCCAA-AAAAGUAUC-GGAGGCUUCUAAAGGUUCCCU
CAGUACGCUUGGUAACCGUACGUA-GAGUG-CAAUGGCAU-AAGGGAGCUUGACU-GUGA
----------------------------------GACAAA---CAAGUCGAUCAGGUACG
AAA-GUAGAGCAUAGUGAUCCGGU-----------GGU---UCCGC-AUG----------
----------GAAGGGCCAUCGCUCAAAGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGCUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCAC
AUCCUGGGGCUGGAGAAGGUCCCAAGGGUUCGGCUGUUCGCCGAUUAAAGUGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGUG-----------------
---A-UGG--------------------------------------GCGU-AGGAAGUUU
GAGUGG-ACC-UGACCUUAGUACGAGAGGAC-CGGGUUGGACUAACCUC-UGGUG-UAUC
UGUUGUGCCGCCAGGUGCAG-U-GCAGAGUAGCCACGUUGGGACGAGAUAAGCGCUGAAA
GCA-UC--UAAGCGCGAAACUCACCACAA-G-AUGAGACUUCC-AU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------AC-AGG----GACGUCAGAGACUAUGACGU-UGAUAGGCU-GCAAGUGUAAA-G
UC-A----------------GA----------AA-----------UG-GCAUAGCUG--A
GCAGUACUAAUU--ACCCGAU-A-AUUUUCUUUG
>Dechloromonas_aromatica
G-AUCAAGCGAC--UAAGUGCAUGU-GGUGGAUG-CCUUGGC-GAUCAC---AGGCGAUG
AAGGACGUGC-AAGCCUGCGAAAAGCGGGGGGGAGCUGGCAAUGAAGCU----UUGAUC-
CCC-CGAUAUCCGAAUGGGGAAACCC---AC----UCA--------------GCAA----
--------------------U---GAGU-A-UCCC-UGA---CUGA--------------
------AUACA--------------------------UA-GGU-CAG-G-GA-GGCGAAC
CCGGUGAACUGAAACAUCUAAGUAGCCG--GAGGAAAAGAAAUCAA-CCGAGAUUCCCCA
AGU-AG-UGGCGAGCGAACGGGGA-U-GA-GCCUG-------------------------
----------------------------------------------CUA------G--U-
GA----------------------UAGCG-----------GA---A-------UGGUU-A
AUGG------AAC-GG-AAUG---------------------------------------
----GAAAG-UCCGG-------CCGUAGUGGGUGAUAGCCCCGUA---------CAUGAA
A--ACCA------A--UCCGU--------GGUACU---AAGU--UAGC----GAAAAGUA
GGGCGGGGCACGUGAAACCUUGUCUGAA-CAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-GUGAUCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAACCUGAAACCGCAUGCAUACAA-ACAGU-GGG
A---GCCU-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------CUUGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-G-UUUAGUAGCAA-GCUUAACC----------GAAUA----------GGGGA--GGCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAUAA-------------------------GG-G-CGA
---------------------UUUAGUUGCUAGGCGUA-GACCCGAAACC-GGAUGAUCU
AUCCAUGGCCAGGAUGAAGGUGCCGUAACA-GGUACUGGAGGUCCGA--ACCCACUA-AU
GUUGAAAAAUUAGGGGAUGAGCUGUGGAUAGGGGUGAAAGGCUAAACAAAUCCGG-AAAU
AGCUGGUUCUCCCCGAAAACUAUUUAGGUAGUGCGUCUU-GUA-----------------
------------------------------------------------------------
--UCA-CUGACGGGGGUAAAGC-ACUGUUAUGG-CUA--GGGGGUC---AUCGC--GACU
UACCAAACCAUGGCAAACUCUGAAUACCGUC-----------------------------
------------------------------------------------------------
----------------------AAGU-GCGA------GCAAGGC-AGACAGA-C-AGUG-
G-GUGCUAACGUCCAU-UGUCAAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CCAAGA--CA-UGG-UU-AA---GU-GGG-------AAACGAAGUGGGAAGGCAUAGACA
GCUAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCGUAAUAGCUCACUAGUC
-----GAGUCGUCCUGCGCGGAAGAUGUAAC-GGGGCUCA-AACCAUG----------CA
CCGAA-GCUGCGGAUAUC------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------GAAAGA
UA-UGGUAGGGGAGC-GUUCUGU-AGG-UCUGU-GAAGGUG--U-CUUGUAAAGG--A-U
GCUGGAGAUA-UCA-GAAGUGCGAAUGC-UGACAU-GAGUA-GCGAUA--AAGG-GAGUG
A--A---------------AAGCUC-CCU-CGCCGA-AAGCCC-AAGGUUUCC-UACGCA
ACGUUCAUCGGCGUAGGGUGAGUCGGC-CC-CUAAGGCGAGGCAG-A-A-AUGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACAGGUC
-AAUA-UUCCUGUACCGAU----UCUA------GAU------------------------
------------------------------------------------------------
------------------------------------GCGAUGUGGGGACGGAGAA-GGUU
AG-GUCAGCCAA-CU-G----UUGGA----AUAGUUGGU-UUAAGC-GUGUA-----G-G
-----CG-----UG------------------CC-CCU-UAGG-----------------
---CAAAU-CCGGGGGGCU--U---AGCUG----AGGCG-U-G-AUG--AC---------
------------------------------------------------------GA----
-GGCAC-UACGGUGCUGAAG-UGAU-U-GAUACCAAGCUUC-C-AGGAAA-AGCCACUAA
GCUU--------------------------------------------------CAGUCU
A-GAAUUGACCGUACCGCAAACCGACACAGGUG-GGCAGGAU-GAAAAUUCUAAGGC-G-
CUUGAG-AGAACUCAG-GAGAAGGAACUCGGC-AAAUUAACACCGUAACUUCGG-GAGAA
GGUGUG-CCCC-G-GU-AGGUUGUAGAGC----------CUCGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GCUC-GAA--GGCCGAUGG--GGUUGC
AGUGAAAUGGUGGCUGCGA-----CUGUUUAAUAAAAACACAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUUGAUGGGGU----------GCAA----------GCCCUUGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUG--GCCACACUGUCUCCUCC----UGA-GA
CUCAGCGAAGUUGAAAUGUUUGUGAAGAUGCAAUCUCCCCGCGGCAAGACGGAAAGA-CC
CCAUGAACC-UUUACUGUAGCUUUGCAUUGGACUUUGAAUCGGUCUGUGUAGGAU-AGGU
GGGAGGCUGUG---AAACCGG-GAC----------------------------GCUA---
-----------------------------------GU-UUCGGUGGAGCC-AA-CCUUGA
AAUA-CCACC-CUGAUUUAUUUGAGGUUCUAACCUUGA--UCCG-UGAAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------UCGGGGACC-GUGCAUGGUGGG
CAGUUUGACUGGGGCGGU-CUCCUCCCA-AAAGGUAAC-GGAGGAGUACGAAGGUACGCU
UAGGGCGGUCGGACAUCGCCCAUA-AAGUG-CAAUGGCAA-AAGCGUGCUUGACU-GCGA
----------------------------------GACCCA---CAAGUCGAGCAGGUGCG
AAA-GCAGGUCAUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCUGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCUC
AUCCUGGGGCUGUAGCCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGAGGUACGUGA
GCUGGGUUUAAAACGUCGUGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGC-UGGAAAUUU
GAAGGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAACCUC-UGGUG-UACC
GGUUAUGACGCCAGUCGUAU-C-GCCGGGUAGCUAUGUUCGGAAGAGAUAAACGCUGAAA
GCA-UC--UAAGCGUGAAACUCGCCUUAA-G-AUAAGAUUUCC-C----GGAGU------
-------------CU--------UGA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------ACU
CCUU--GA-AGG----GUCGUCGAAGACCACGACGU-UGAUAGGUC-AGGUGUGGAAG-C
GC-A----------------GU----------AA-----------UGCGUUAAGCUA--A
CUGAUACUAAUU--GCCCGUACG-GCUUGAUCCU
>Dehalococcoides_ethenogenes
G-GUCAAGCAGG--UAAGGGCACAU-GGUGGAUG-CCUUGGU-AUCAAG---AGCCGAUG
AAGGACGUGG-UAA-CUGCGAUAAGCCUCGGUCAGCUGUAA-CAAGCU-------UAGC-
CGG-GGAUUUCCGAAUGGGGCAACCC---GC----UCAGG-C-----------AAA----
------A---C----C----U---GGGU-A-CUUC-CAG---CUCA--------------
------ACACA--------------------------UA-GGC-UGG-GUAG-AGGUAAG
UGGGGGAAGUGAAACAUCUCAGUACCCC--GAGGAAAAGAAA--------UUAUUCUCCU
AGU-AG-CGGCGAGCGAACGGGGA-U-GA-GCCCAAA-----------------------
--------------CAAGCCUGG----UUG------------AAAGAAA------UCUG-
UG----------------------GCAGA---------GCAA---A-------AGAAG-A
CCUG------AAGGUC-CCUG---------------------------------------
----GAACG-GGCAA-------CCACAGAGGGUGAGAGUCCCGUA---------AAUUAA
A--GGGU------G--UAGGC----------UUCU---GAUU--CUUU----CUUGAGUA
CCACGAGACUCGUGGAAUCUCGUGGGAA-UCCGCCGUG-ACC--ACAUGGCAAGGCUAAA
UA--CUC--UUGAUGACCGAUAGU-GAAC-U-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGA-GAGGGG-A-GUGAAAUAGAA-CUGAAACCGUGUGCCUACAA-GCAGU-CAG
A---GGAC----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------GUAAG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------C--UCUGAUGGCGUGACUAUUGAAGAAUUAUCCGACGAGUUAC
-----UCAGUGCAG-GGUUAAGCAU---------UAAG--------UUGCGCA--GCCGA
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
---------------------UUUAGUUG--UACUGUA-GACCCGAAGCC-GGGUGAUCU
AUCCAUGGCCAGGGUGAAGUGAAGGUAAUA-CUUCGCGGAGGCCCGA--ACCAGUCA-AC
GUGGCAAAGUUGUUGGAUGAGCUGUGGAUAGCGGUUAUAUGCCAAACGAACCCGG-GGAU
AGCUGGUUCUCCUCGAAAUGCUUUAGG----AGCCUCAG-GCG-----------------
------------------------------------------------------------
-UUCA-UUAAUGGAGGUAGUGC-ACUGGAUAGA-CUA--GGGGGA----GA-GA---UCC
UGUCA-ACUCUAACAAACAUCGAAUGCCAUU-----------------------------
------------------------------------------------------------
----------------------AAUC-A-AA------GCCUGGG-AGUGAGA-C-UAUG-
G-GGGCUAAGCUCCAU-AGUCAAAAG-GGAAAC---AGCCCAGACCAUCAGCUAAGGUCC
CUAAGC--GC-AGG-CU-AA---GU-GGG-------AAAGGAAGUAGCAUUGCCUAGACA
UCCAGUAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAGUGCGUAAUAGCUCACUGGUU
-----GAGUGGUGUUGCGCCGACAAUCCAAC-GGGGCUUA-A--CUGU----------CA
CCGAA-GCUAUGGAUCUACCU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------AUGGUA
GA-UGGUAGAGGAGC-GUUCCCU-C-G-GCAGU-GAAGCAG--G-AGUGUAAACA--A-C
UGUGGAGCUU-AGG-GAAGUGAGAAUGU-CGGAAU-GAGUA-GCG-CA--AGGC-GUGUG
A--G---------------AAACAC-GCC-CACCGU-AAACCU-AAGGUUUCC-UACGCA
AGGUUAAUCCGCGUAGGGUUAGUCGG--AC-CUAAGCCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GGC-GA-U--GGAC-AGCAGGUU
-AUUA-UUCCUGCACCACC----GUU-------GUG------------------------
------------------------------------------------------------
------------------------------------GAGGAGGGGGGACACAGGA-GGAU
AG-AUCAGGCAU-GC-A----UUGGA----CAUCGUGUC-GCUGAA-CCCUA-----G-A
-----C------UU------------------UC-AAA-UAGG-----------------
---CAAAU-CCGUUUGGAG--UUAAGUUGA----AGUUG-U-G-AAGGUGC---------
------------------------------------------------------GG----
-GAGAUC---CAAGCCAAUC-UGGU-U-GAGUCCAAGCUGU-C-GAGAAA-AGCCUCUAC
UGU-----------------------------------------------------GAAG
A-AUGGUGACCGUACCGCAAACCGACACUGGUA-GGUGGGGG-UAAAUUCCCAAGGU-G-
AUCGAG-AUAACCCUC-GUUAAGGAACUCGGC-AAUCUAGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCCU-C-GC--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGAG--GGUUAC
AAUAAAGUGGCUCGAGUGA-----CUGUUUAACAAAGACACAGGUCUCUGCAAAAGCG--
--AA-A-------------GCUGAAGU-AUAGGGGCUGA-CACCUGCCCAGUGCUG-G-A
AGGUUAAGGGGAGGAGUUA-GG-----GCAA-----CCAAAGCUCUGAACCGAAGCCC--
CAGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUCCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGUAUAACAACU--UGAGCGCUGUCUUAACG----AGG-GA
CUCGGUGAAAUUGAAUUACCCGUGAAGAUGCGGGUUUCCCGCGACUGGACAAAAAGA-CC
CCGUGGAGC-UUUACUAUAACUUGCCAUUGAGUCUGGGUUCAUCAUGUGUAGGAU-AGGU
GGGAGGCUGAG---AAGCCAG-GGC----------------------------GCUA---
-----------------------------------GC-CUUGGUGGAGCC-AA-CGUUGA
AAUA-CCACU-CUUGAUGGAUCUAGCCUCUAACUC-UA--G----AACAAG---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------C--------------------
--------------------------------------UAGAGGACA-GUGGCUGGUGGA
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAUUGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGGGUGGAUGGAAAUCACCCUAA-GAGUG-CAUUGGCAU-AAGGGAGCUUGACU-GCGA
----------------------------------GACAUA---CAAGUCGAGCAGGGACG
AAA-GUCGGGCAAAGUGAUCCUAC-----------GGC---ACUGA-GUG----------
----------GAAGGGCCGUGGCUUAUCGG-AUAAAAGCUACCCCGGGG-AUAACAGGCU
UAUCUUGCCCAAGAGUUCACAUCGACGGCAAGGUUUGGCACCUCUAUGUCGGCUCGUCGC
AUCCUGGGGCUGGAGUAGGUCCCAAGGGUCCGGCUGUUCGCCGGUUAAAGCGGCACGCGA
GCUGGGUUCAGACCGUCGUGAGACAGGUCGGUCUCUAUCCGUC-----------------
---G-UGG--------------------------------------GCGU-UGGAGAUUU
GAGAGG-GUC-UUUCCAUAGUACGAGAGGAC-CUGGAAGGACAGACCAA-UGGUG-UGUC
AGUUGUUCUGCCAAGGGCAU-U-GCUGAGUAGCCAAGUCUGGUUUGGAUAAGCGCUGAAA
GCA-UC--UAAGUGCGAAGCCGGCCUCAA-G-AUUAGAUCUCC-CA---UCCCC------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
GGGG--UA-AGA----CCGCAGGUAGACUACCUGCU-UGAUAGGCU---GUGUGUAAG-U
AC-G----------------GU----------AA-----------CGUAUUAAGCU----
-CAGUACUAAU---GGUCGAG-G-GCUUGACC--
>Deinococcus_radiodurans
G-GUCAAGAUAG--UAAGGGUCCAC-GGUGGAUG-CCCUGGC-GCU-GG---AGCCGAUG
AAGGACGCGA-UUACCUGCGAAAAGCCCCGACGAGCUGGAGAUACGCUU-----UGACU-
CGG-GGAUGUCCGAAUGGGGAAACCC---AC----CUC--------------GUAA----
--------------------G---AGGU-A-UCC--------------------------
------GCAA--------------------------------------G-GAU-GGGAAC
UCAGGGAACUGAAACAUCUCAGUACCUG--AAGGAGAAGAAAGAGA-AUUCGAUUCCGUU
AGU-AG-CGGCGAGCGAACCCGGA-U-CA-GCCCAAACCGAA---ACGCUUG--------
--------------CGU-UUCGGGG--UUG------------UAGGACC------AGUU-
UU----------------------UAAGAU--------UCAA---C-------CCCUCAA
GCCG------AAG-UG-GCUG---------------------------------------
----GAAAG-CUACA-------CCUCAGAAGGUGAGAGUCCUGUA---------GGCGAA
C--GAGC------G--GUUGA----------CUGU----ACU--GGCA----CCUGAGUA
GGUCGUUGUUCGUGAAACGAUGACUGAA-UCCGCGCGG-ACC--ACCGCGCAAGGCUAAA
UA--CUC--CCAGUGACCGAUAGC-GCA--U-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAGAGAACCUGAAACCGUGGACUUACAA-GCAGU-CAU
G---GCAC----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------CUUAUC-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------G--UGUUAUGGCGUGCCUAUUGAAGCAUGAGCCGGCGACUUAG
AC-CUGACGUGCGA-GCUUAAGUU----------GAAA---------AACGGA--GGCGG
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAAUA-------------------------GG-G-CGG
--------------------CAUUAGUACGUCGGGCUA-GACUCGAAACC-AGGUGAGCU
AAGCAUGACCAGGUUGAAACCCCCGUGACA-GGGGGCGGAGGACCGA--ACCGGUGC-CU
GCUGAAANAGUCUCGGAUGAGUUGUGUUUAGGAGUGAAAAGCUAACCGAACCUGG-AGAU
AGCUAGUUCUCCCCGAAAUGUAUUGAGGUACAGCCUCGG-AUG-----------------
------------------------------------------------------------
-UUGA-CCAUGUCCUGUAGAGC-ACUCACAAGG-CUA--GGGGGCC---UA-CC--AGCU
UACCAAACCUUAUGAAACUCCGAAGGGGCAC-----------------------------
------------------------------------------------------------
----------------------GCGU-U-UA------GUCCGGG-AGUGAGG-C-UGCG-
A-GAGCUAACUUCCGU-AGCCGAGAG-GGAAAC---AACCCAGACCAUCAGCUAAGGUCC
CUAAAU--GA-UCG-CU-CA---GU-GGU-------UAAGGAUGUGUCGUCGCAUAGACA
GCCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUCAAAGAGUGCGUAAUAGCUCACUGGUC
-----GAGUGACGAUGCGCCGAANAUG-AUC-GGGGCUCA-AGUGAUC----------UA
CCGAA-GCUAUGGAUUCAACUC--------------------------------------
------------------------------------------------------------
--------------GC--------------------------------------------
-------------------------------------------------GAAGCGAGUUG
UC-UGGUAGGGGAGC-GUUCAGU-C-C-GCGGA-GAAGCCA--U-ACCGGAAGGA--G-U
GGUGGAGCCG-ACU-GAAGUGCGGAUGC-CGGCAU-GAGUA-ACGAUA--AAAG-AAGUG
A--G---------------AAUCUU-CUU-CGCCGU-AAGGAC-AAGGGUUCC-UGGGGA
AGGGUCGUCCGCCCAGGGAAAGUCGGG-AC-CUAAGGUGAGGCCG-A-A-CGGC----GC
A-----------------------------------------------------------
-------------------------------------GCC-GA-U--GGAC-AGCAGGUC
-AAGA-UUCCUGCACCGAU----CAUG------UGGA-----------------------
------------------------------------------------------------
------------------------------------GUGAUGGAGGGACGCAUUA-CGCU
AUCCAAUGCCAA-GC-U----AUGGC----UAUGCUGGU-UGGUAC-GCUCAA----G-G
-----G------CG------------------AU-CGGGUCAG-----------------
---AAAAU-CUACCGGUCA--C-AUGCCUC----AGACG-U-A-UCG--GG---------
------------------------------------------------------------
-AGCUUCCUCGGAAGCGAAG-UUGG-A-AACGCGACGGUGC-C-AAGAAA-AGCUUCUAA
ACGU--------------------------------------------------UGAAAC
A-UGAUUGCCCGUACCGCAAACCGACACAGGUG-UCCGAGUGUCAAUGCACUAAGGC-G-
CGCGAG-AGAACCCUC-GUUAAGGAACUUUGC-AAUCUCACCCCGUAACUUCGG-AAGAA
GGGGUC-CCCA-C-GC--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------UUCGCGUG--GGGCGC
AGUGAAUAGGCCCAGGCGA-----CUGUUUACCAAAAUCACAGCACUCUGCCAACACG--
--AACA-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUCAAGUGGAGCGGU----------GCAA----------GCUGCGAAAUGAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAAGGCGUAACGAUC--UGGGCGCUGUCUCAACG----AGG-GA
CUCGGUGAAAUUGAAUUGGCUGUAAAGAUGCGGCCUACCCGUAGCAGGACGAAAAGA-CC
CCGUGGAGC-UUUACUAUAGUCUGGCAUUGGGAUUCGGGUUUCUCUGCGUAGGAU-AGGU
GGGAGCCUGCG---AAACUGG-CCU----------------------------UUUG---
-----------------------------------GG-GUCGGUGGAGGC-AA-CGGUGA
AAUA-CCACC-CUGAGAAACUUGGAUUUCUAACCUGAA--A------AAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------AC----UU--------------------
--------------------------------------UCGGGGACC-GUGCUUGGCGGG
UAGUUUGACUGGGGCGGU-CGCCUCCCA-AAAUGUAAC-GGAGGCGCCCAAAGGUCACCU
CAAGACGGUUGGAAAUCGUCUGUA-GAGCG-CAAAGGUAG-AAGGUGGCUUGACU-GCGA
----------------------------------GACUGA---CACGUCGAGCAGGGAGG
AAA-CUCGGGCUUAGUGAACCGGU-----------GGU---ACCGU-GUG----------
----------GAAGGGCCAUCGAUCAACGG-AUAAAAGUUACCCCGGGG-AUAACAGGCU
GAUCUCCCCCGAGAGUCCAUAUCGGCGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGAAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCCGCU-----------------
---A-CGG--------------------------------------GCGC-AGGAGAAUU
GAGGGG-AGU-UGCUCCUAGUACGAGAGGAC-CGGAGUGAACGGACCGC-UGGUC-UCCC
UGCUGUCGUACCAACGGCAC-AUGCAGGGUAGCUAUGUCCGGAACGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCAGCCCCAA-G-AUGAGUUCUCC-CA---CUGUU------
-------------U----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------------AU
CAGG--UA-AGA----CUCCCGGAAGACCACCGGGU-UANGAGGCC-AGGCGUGCACG-C
AU-A----------------GC----------AA-----------UGUGUUCAGCGG--A
CUGGUGCUCAUC--AGUCGAG-G-UCUUGACCAC
>Escherichia_coli
G-GUUAAGCGAC--UAAGCGUACAC-GGUGGAUG-CCCUGGC-AGUCAG---AGGCGAUG
AAGGACGUGC-UAAUCUGCGAUAAGCGUCGGUAAGGUGAUAUGAACCGU----UAUAAC-
CGG-CGAUUUCCGAAUGGGGAAACCC---AG----UGUGU------------UUCG----
----------A----C----A---CACU-A-UCAU-UAA---CUGA--------------
------AUCCA--------------------------UA-GGU-UAA-U-GA-GGCGAAC
CGGGGGAACUGAAACAUCUAAGUACCCC--GAGGAAAAGAAAUCAA-CCGAGAUUCCCCC
AGU-AG-CGGCGAGCGAACGGGGA-G-CA-GCCCA-------------------------
----------------------------------------------GAG------CCUGA
AU----------------------CAGUG-----------UG---U-------GUGUU-A
GUGG------AAG-CG-UCUG---------------------------------------
----GAAAG-GCGCG-------CGAUACAGGGUGACAGCCCCGUA---------CACAAA
A--AUGC------A--CAUGC-----------UGU-----GA--GCUC----GAUGAGUA
GGGCGGGACACGUGGUAUCCUGUCUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUGACUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGGCGAGGGG-A-GUGAAAAAGAACCUGAAACCGUGUACGUACAA-GCAGU-GGG
A---GCAC-G---C----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------GCG--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAU
-A-UUCUGUAGCAA-GGUUAACC----------GAAUA----------GGGGA--GCCGA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAACU-------------------------GG-G-CGU
----------------------UAAGUUGCAGGGUAUA-GACCCGAAACC-CGGUGAUCU
AGCCAUGGGCAGGUUGAAGGUUGGGUAACA-CUAACUGGAGGACCGA--ACCGACUA-AU
GUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG-AGAU
AGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGU-GAA-----------------
------------------------------------------------------------
-UUCA-UCUCCGGGGGUAGAGC-ACUGUUUCGG-CAA--GGGGGUC---AUCCC--GACU
UACCAACCCGAUGCAAACUGCGAAUACCGGA-----------------------------
------------------------------------------------------------
----------------------GAAU-GUUA------UCACGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CAAAGU--CA-UGG-UU-AA---GU-GGG-------AAACGAUGUGGGAAGGCCCAGACA
GCCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AACCAUG----------CA
CCGAA-GCUGCGGCAGCGACGC--------------------------------------
------------------------------------------------------------
--------------UUAU------------------------------------------
------------------------------------------------------GCGUUG
UU-GGGUAGGGGAGC-GUUCUGU-AAG-CCUGC-GAAGGUG--U-GCUGUGAGGC--A-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-AAGUA-ACGAUA--AAGC-GGGUG
A--A---------------AAGCCC-GCU-CGCCGG-AAGACC-AAGGGUUCC-UGUCCA
ACGUUAAUCGGGGCAGGGUGAGUCGAC-CC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACUUGG----UGUU------ACU------------------------
------------------------------------------------------------
------------------------------------GCGAAGGGGGGACGGAGAA-GGCU
AU-GUUGGCCGG-GC-G----ACGGU----UGUCCCGGU-UUAAGC-GUGUA-----G-G
-----CU-----GG------------------UU-UUC-CAGG-----------------
---CAAAU-CCGGAAAAUC----AAGGCUG----AGGCG-U-G-AUG--AC---------
------------------------------------------------------GA----
-GGCAC-UACGGUGCUGAAG-CAAC-A-AAUGCCCUGCUUC-C-AGGAAA-AGCCUCUAA
GCAU--------------------------------------------------CAGGUA
A-CAUCAAAUCGUACCCCAAACCGACACAGGUG-GUCAGGUA-GAGAAUACCAAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AAAAUGGUGCCGUAACUUCGG-GAGAA
GGCACG-CUGA-U-AUGUAGGUGAGGUCC----------CUCGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GGAU-GGA--GCUGAAAUC--AGUCGA
AGAUACCAGCUGGCUGCAA-----CUGUUUAUUAAAAACACAGCACUGUGCAAACACG--
--AA-A-------------GUGGACGU-AUACGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUUGAUGGGGUUA-GC-----GCAA-----GCGAAGCUCUUGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGAUG--GCCAGGCUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGUGUG-GAC----------------------------GCCA---
-----------------------------------GU-CUGCAUGGAGCC-GA-CCUUGA
AAUA-CCACC-CUUUAAUGUUUGAUGUUCUAACGUUGA--CCCG-U-AAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UUGCGGACA-GUGUCUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCUA-AAGAGUAAC-GGAGGAGCACGAAGGUUGGCU
AAUCCUGGUCGGACAUCAGGAGGU-UAGUG-CAAUGGCAU-AAGCCAGCUUGACU-GCGA
----------------------------------GCGUGA---CGGCGCGAGCAGGUGCG
AAA-GCAGGUCAUAGUGAUCCGGU-----------GGU---UCUGA-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGC-UGGAGAACU
GAGGGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGCAUCAC-UGGUG-UUCG
GGUUGUCAUGCCAAUGGCAC-U-GCCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAA
GCA-UC--UAAGCACGAAACUUGCCCCGA-G-AUGAGUUCUCC-CU---GACUC------
-------------CU--------UGA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GAG
UCCU--GA-AGG----AACGUUGAAGACGACGACGU-UGAUAGGCC-GGGUGUGUAAG-C
GC-A----------------GC----------GA-----------UGCGUUGAGCUA--A
CCGGUACUAAUG--AACCGUGAG-GCUUAACCUU
>Fusobacterium_nucleatum
G-UUAAAAUAAU--UAAGGGCACAC-AAAGGAUG-CCUAGGU-AGUAAG---AGCCGAUG
AAGGACGUGG-UAAGCUGCGAUAAGCCUAGAUAAGUUGCAAUCGAACGU----AAGAGU-
CUA-GGAUUUCCGAAUGGAGCAAUCU---AU----UAAGA-U-----------GGA----
------G---U----C----U---UAAU-A-C----------------------------
------GAAA----------------------------------------GA--GGGAAC
CGCGUGAACUGAAACAUCUAAGUAACGC--GAGGAAAAGAAAGUAA-AAACGAUACCCAA
AGU-AG-CGGCGAGCGAACUGGGU-C-AA-GCCUAAACCUUAA-AUAUGUCA-AGGAUA-
CAGC---CGU-UG-UAUUUAAGGGG--UAG------------AGGGACA------AAGU-
AGUGAAG-AACUGUAAGAUAUUCAAUAUA---------GUGU--AU-------UGAUGAA
UUAG------AAU-UG-UCUG---------------------------------------
----GAAAG-AUGAA-------CCGCAGAAGGUGAAAGUCCUGUA---------UAAGUA
A--AUCC------U--UACAC----------AUAU--AACUU--UGCU----CCCAAGUA
ACAUGGAACACGAGGAAUUCUGUGUGAA-UCAGUGAGG-ACCAAAUCUCAUAAGGCUAAA
UA--CUC-UU-ACUAACCGAUAGC-GCA--U-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCUG-GAGGGG-A-GUGAAAUAGAACCUGAAAUUGUGUGCUUACAA-GCGGU-CAG
A---GCCC----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------AUUU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------G--GGUGAUGGCGUGCCUUUUGGAGAAUGAUCCUGCGAGUUAC
-G-UUAAACGGCGA-GGUUAAG-----------UAUAA-----------CGGA--GCCGA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------AAGUCU--------------
----------------------UAAUA-------------------------GG-G-CGA
---------------------AUUAGUCGUUUGGCGUA-GACGCGAAACC-UGGUGAUCU
AAACCUGUCCAGGAUGAAGCUGUGGUAAGA-CACAGUGGAGGUCCUA--ACCCACCG-CC
GUUGAAAAGUUGGGGGAUGAGGUAGGUUUAGGGGUGAAAAGCCAAUCGAACCAGG-AGAU
AGCUCGUUCUCUCCGAAAUGCAUCUAGGUGCAGCCUUGA-GUG-----------------
------------------------------------------------------------
-UUCA-AUUAUGGGGGUAGAGC-ACUGAAUGAU-CUA--GGGGGC----AUAUU---GCU
UACUGAAAUCAAUCAAACUCCGAAUACCAUA-----------------------------
------------------------------------------------------------
----------------------AUUU-A-UA------GCUCAGG-AGUGAGA-C-UAUG-
G-GAGUUAACUUCCAU-UGUCAAAAG-GGAAAC---AACCCAGACCACCAGCUAAGGUCC
CUAAUU--AU-AA--CU-AA---GU-GGG-------AAAGGAGGUGGAGAUUCACAAACA
ACUAGGAGGUUGGCUUAGAAGCAGCCAUACCUUUAAAGAGUGCGUAAUAGCUCACUAGUC
-----GAGAGUCUCUGCGCCGACAAUGUAAC-GGGGCU-A-AGUUAUA----------AA
CCGAA-GCUGUGGAAUCCUUU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UGG
AU-UGGUAGGAGAGC-GUUCUGU-AGG-CCGUU-GAAGAAG--A-AGGGUAACCG--A-C
UUUGGAGGUA-UCA-GAAGUGAGAAUGC-AGGAAU-AAGUA-GCGAGA--AAGG-GGGCG
A--G---------------AAUCCU-CCU-CGCCGG-AAGACC-AAGGUUUUC-AGGGUA
AAGCUUGUCUUCCCUGAGUAAGCCGGG-AC-CUAAGCCCAGGCUA-U-A-AUGC----GU
A-----------------------------------------------------------
-------------------------------------GGC-GAAU--GGAA-AACAGAUU
-AAUA-UUUCUGUGCCAGU----CAUG------UAUU-----------------------
------------------------------------------------------------
------------------------------------GUGAUGGAGGGACGCAGAA-GGGU
AU-GCGCGCGGA-CG-A----ACGGA----AGUGUCCGU-AGAAGU-AUGUA-----G-G
-----G------UG-----------------ACU-UAG-UAGG-----------------
---UAAAU-CCAUUAAGUU----AAAUCUG----AGGUA-U-G-AUA--UA---------
------------------------------------------------------CA----
-GUCG-----UAAGAUGAAU-GCGC-A-AAUCCCACGCUGC-C-AAGAAA-AGCUUCUAA
CGUU---------------------------------------------------AAUAU
A-UGACUGCCCGUACUGUAAACCGACACAGGUG-GUCAGGAU-GAGAAAUCUAAGGC-G-
GACAGG-CUAACUCUC-GUUAAGGAACUCUGC-AAAAUAACCUCGUAACUUCGG-GAGAA
GAGGAG-CCCU-U-GU--GUGUGAGUAUA----------CACGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GAUACAAA--GCGCACGAG--GGUCGC
AGUGAAGAGGCUCAAGCAA-----CUGUUUAACAAAAACACAGGUCUAUGCUAAGCUG--
--UA-A-------------GGCGAUGU-AUAUGGGCUGA-CACCUGCCCAGUGCUG-G-A
AGGUUAAGAGGAGGAGU----------GAGA----------GCUCCGAAUUGAAGCCC--
CAGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGUGUAAUGAUU--UGAGCGCUGUCUUGACG----GGA-GG
CCUGGUGAAAUUGUAUUACCGGUGAAGAUACCGGUUACCUACAGUAGGACGGAAAGA-CC
CCAUGGAGC-UUUACUGUAGCUUGGUAUUGGGUUUUGGCAUUGCAUGUAUAGGAU-AGUU
GGGAGACUAUG---AUGAUAU-GGC----------------------------GCUA---
-----------------------------------GC-UGUAUCGGAGUC-AU-CGGUGG
AAUA-CCAAC-CAUUCAAUGCUGAAAUUCUAAUCU-GU--GGU--U-UGUA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------G----CC--------------------
--------------------------------------ACGGAGACA-GUGCUAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCGA-AAGAGUAAC-GGAGGCGUUCAAAGGUUCUCU
CAGGUUGGAUGGAAAUCAACCAUA-GAGUG-CAAUGGCAU-AAGAGAGCUUGACU-GCAA
----------------------------------GACUGA---CGGGUCGAGCAGAUGCG
AAA-GCAGGACAUAGUGAUCCGGC-----------GAU---UCCGA-AUG----------
----------GAAGGGUCGUCGCUCAACGG-AUAAAAGCUACCCUGGGG-AUAACAGGCU
GAUCCUACCCGAGAGUCCAUAUCGACGGUAGGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGGAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCACU-----------------
---G-UAG--------------------------------------GCGU-UAGAAUAUU
GAGAAG-ACC-UGUCCUUAGUACGAGAGGAC-CGGGAUGGACAAACCUC-UGAUG-UACC
AGUUGUCACGCCAGUGGCAC-A-GCUGGGUAGUCACGUUUGGAAUAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUAACUUCAA-G-AUAAGUAUUCU-U---------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UA-AGA----UACCUUCGAGCCUAGGAGGU-UGAUAGGUU-GGGGGUGUAAG-U
AC-A----------------GC----------AA-----------UGUAUUUAGCUG--A
CCAAUACUAAUU--AUCGAA--G-UUUUAAUCUA
>Geobacillus_kaustophilus
G-GUUAAGCUGG--AAAGGGCGCAC-GGUGGAUG-CCUUGGC-ACUAGG---AGCCGAUG
AAGGACGGGG-CAAACGCCGAAACGCUUCGGGGAGCUGUAAGCAAGCGU-----UGAUC-
CGG-AGAUGUCCGAAUGGGGGAACCC---AC----UGUCCGU-----------AAU----
------G---G----G----G---CAGU-A-UCCA-UGC---CUGA--------------
------AUCCA--------------------------UA-GGG-CAU-G-GAGGGCACAC
CCGGGGAACUGAAACAUCUUAGUACCCG--GAGGAGAAGAAAGCAA-CCGCGAUUCCCUG
AGU-AG-CGGCGAGCGAAACGGGA-A-CA-GCCCAAACCAAG---AGGCAUG--------
------------U-CCU-CUUGGGG--UUG------------UAGGACC------GCUCA
CGA--------------------UGGGAGUGAGAAA--GGGA---C-------GGGGU-A
GACG------AACCGG-UCUG---------------------------------------
----GAACG-GCCGG-------CCAGAGAAGGUGAGAGCCCUGUA---------GUCGAA
A--CUUC------G--UUCCC----------UCCC---GAGC--GGAU----CCUGAGUA
CGGCGGGACACGAGGAAUCCCGUCGGAA-GCAGGGAGG-ACC--AUCUCCCAAGGCUAAA
UA--CUC-CCUAGUGACCGAUAGU-GCAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGG-GAGGGG-A-GUGAAAGAGAACCUGAAACCGUGUGCCUACAA-GUAGU-CAG
A---GCCC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUGA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------UG--GGUGAUGGCGUGCCUUUUGUAGAAUGAACCGGCGAGUGAC
-G-AUGGCGUGCGA-GGUUAAGCC---------GAAGA---------GGCGGA--GCCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAACA-------------------------GG-G-CGU
---------------------GUGAGUACGUCGUCGUC-GACCCGAAACC-AGGUGAUCU
ACCCAUGUCCAGGGUGAAGGCCGGGUAACA-CCGGCUGGAGGCCCGA--ACCCACGC-AC
GUUGAAAAGUGCGGGGAUGAGGUGUGGGUAGGGGUGAAAUGCCAAUCGAACUUGG-AGAU
AGCUGGUUCUCCCCGAAAUAGCUUUAGGGCUAGCCUCGG-GUUU----------------
------------------------------------------------------------
-GAGA-GUCUUGGAGGUAGAGC-ACUGAUUGGG-CUA--GGGGCCC---CAAAC--GGGU
UACCGAACCCAGUCAAACUCCGAAUGCCAAU-----------------------------
------------------------------------------------------------
----------------------GACU-U-AU------GCCCGGG-AGUCAGA-C-CGCG-
A-GUGAUAAGAUCCGU-GGUCGAGAG-GGGAAC---AGCCCAGACCGCCAGCUAAGGCCC
CGAAGU--GC-ACG-UU-CA---GU-GGA-------AAAGGAUGUGGAGUUGCCGAGACA
ACCAGGAUGUUGGCUUAGAAGCAGCCA-CCAUUUAAAGAGUGCGUAAUAGCUCACUGGUC
-----GAGUGACUCUGCGCCGAAAAUGUACC-GGGGCU-A-AACGUGC----------CG
CCGAA-GCUGCGGGAUGACCGU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------UGGUC
AU-CGGUAGGGGAGC-GUUCUAA-G-G-GCAGA-GAAGCCA--G-ACCGGAAGGA--C-U
GGUGGAGCGC-UUA-GAAGUGAGAAUGC-CGGUAU-GAGUA-GCGAAA--ACAG-AGGUG
A--G---------------AAUCCU-CUG-CGCCGA-AAGCCU-AAGGGUUCC-UGAGGA
AGGUUCGUCCGCUCAGGGUUAGUCGGG-AC-CUAAGCCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GGU-GA-U--GGAC-AACAGGUU
-GAGA-UUCCUGUACCACC----UUCU------UCCC---------GUUUGA--------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGCAGGA-GGAU
AG-GGCGAGCAG-GCGG----CUGGA----AGAGCCUGU-CCAAGC-CGUGA-----G-G
-----C------UG------------------AU-CCG-CAGG-----------------
---CAAAU-CCGCGGAUCA--U-AAGGCCA----AGCGG-U-G-ACG--GC---------
------------------------------------------------------GA----
-CGGA---UUGAUCCGGAAG-UCCC-C-GAUUUCACACUGC-C-AAGAAA-AGCCUCUAG
CG-----------------------------------------------------AGGGA
A-GAGGUGCCCGUACCGCAAACCGACACAGGUA-GGCGAGGA-GAGAAUCCUAAGGC-G-
CGCGGG-AGAACUCUC-GUUAAGGAACUCGGC-AAAAUGACCCCGUAACUUCGG-GAGAA
GGGGUG-CUCU-U-UG--GGGUGA------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------AGA--GCCCUGAAG--AGCCGC
AGUGAAAAGGCCCAAGCGA-----CUGUUUAUCAAAAACACAGGUCUCUGCGAAGCCG--
--AA-A-------------GGCGACGU-AUAGGGGCUGA-CACCUGCCCGGUGCUG-G-A
AGGUUAAGGGGAGCGCUUA-GC-----GGAA-----GCGAAGGUGCGAACCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGUGUAACGACU--UGGGCGCUGUCUCAACG----AGA-GA
CCCGGUGAAAUUAUACUACCUGUGAAGAUGCAGGUUACCCGCGACAGGACGGAAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGAUAUGGAAUUUUGGUAUCGCUUGUACAGGAU-AGGU
GGGAGCCUGGG---AAGCCGG-AGC----------------------------GCCA---
-----------------------------------GC-UUCGGUGGAGGC-GA-CGGUGG
GAUA-CCACC-CUGGCGGUAUUGAAAUUCUAACCCGCA--CCCC-U-UAGC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------GG----GG--------------------
--------------------------------------UGGGAGACA-GUGUCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCCA-AAAGGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGAAUGGUUGGAAAUCAUUCGGA-GAGUG-CAAAGGCAC-AAGGGAGCUUGACU-GCGA
----------------------------------GACGGA---CAGGUCGAGCAGGGACG
AAA-GUCGGGCUUAGUGAUCCGGU-----------GGU---UCCGC-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGCUACCCCGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUC-----------------
---G-CGG--------------------------------------GCGG-AGGAAAUUU
GAGAGG-AGC-UGUCCUUAGUACGAGAGGAC-CGGGAUGGACGCACCGC-UGGUG-UACC
AGUUGUCCCGCCAGGGGCAC-C-GCUGGGUAGCUAUGUGCGGACGGGAUAAGCGCUGAAA
GCA-UC--UAAGCGUGAAGCCCCCCUCAA-G-AUGAGAUUUCC-CA---CCGCG------
-------------CA---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
CGGG--UA-AGA----UCCCUCGAAGAUGACGAGGU-CGAUAGGUC-CGAGGUGGAAG-C
GU-G----------------GC----------GA-----------CACGUGGAGCUG--A
CGGAUACUAAUC--GAUCGAG-G-GCUUGACCUA
>Geobacter_sulfurreducens
G-GUCAAGCUAC--UAAGGGCGUAC-GGUGGAUG-CCUAGGC-AGAGAG---AGGCGAUG
AAGGACGUGG-UAAGCUGCGAAAAGCCUCGGGGAGCCGCUAAACAGGCU----UUGAUC-
CGG-GGGUGUCCGAAUGGGGAAACCC---GG----CGGAGGU-----------CAU----
------G---C----U----C---CGUC-A-UCGU-GCA---CUGA--------------
------AUCCA--------------------------UA-GGU-GCA-U-GA-AGCGAAC
GGGGGGAACUGAAACAUCUAAGUACCCC--CAGGAAAAGAAAACAA-UAGUGAUUCCGUC
AGU-AG-UGGCGAGCGAAAGCGGA-A-CA-GCCCAAACCGAGA-GGACUACG--------
------------G-UCCUUUCGGGG--UUG------------UGGGACC------CCGA-
CG----------------------UGGGA---------UUGA-UGA-------UGGGU-A
GCUA------AAC-GG-UCUG---------------------------------------
----GAAAG-UCCGG-------CCAUAGUGGGUGAUAGCCCCGUA---------AGCGAA
A--CCUU------G--AUUCA----------CCCU---AGGG--GUAU----CCCGAGUA
CCGCGGGACACGUGGAAUCCCGUGGGAA-GCUGGGAGG-ACC--AUCUCCCAAGGCUAAA
UA--CUA-CUCUCUGACCGAUAGU-GCAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGU
AC-UCCGAUGAGGAG-G-GUGAAAUAGAACCUGAAACCGUAUGCCUACAA-GCAGU-GGG
A---GCAC-U---AU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------G-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UAUAU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------C----
---------------AAG--UGUGACCGCGUGCCUUUUGCAUAAUGAGUCAGCGAGUUAC
-U-CUCGGCAGCGA-GGUUAAGCU---------CAUAG---------AGUGGA--GCCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
---------------------UUGAGUUGCCGGGAGUA-GACCCGAAACC-GGGUGAUCU
AUCCAUGUCCAGGGUGAAAGGAAGGUAACA-CUUCGUGGAGGCCCGA--ACCCACUG-GC
GUUGAAAAGCCAGGGGAUGAGGUGUGGAUAGGAGUGAAAGGCUAAUCAAACUCGG-AGAU
AGCUGGUUCUCCCCGAAAUAUAUUUAGGUAUAGCCUCGU-GAA-----------------
------------------------------------------------------------
-GUAA-GUAGUGGGGGUAGAGC-ACUGAAUGGG-CUA--GGGGUCC---UA-CC--AGAU
UACCAAACCCAAUCAAACUCCGAAUACCACU-----------------------------
------------------------------------------------------------
----------------------AACU-GUUA------UCACGGG-AGUCAGA-C-UGCG-
G-GUGAUAAGAUCCGU-AGUCAAAAG-GGAAAG---AGCCCAGAUCGUCGGCUAAGGUCC
CAAAAU--CC-AUG-CU-AA---GU-GGA-------AAACGAUGUGGAAAUGCCCAGACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUGGGUCUGCGCGGAAAAUGUAAC-GGGGCUCA-AGCAUGG----------UA
CCGAA-GCCACGGGUUGAUACC--------------------------------------
------------------------------------------------------------
--------------UU--------------------------------------------
----------------------------------------------------AAGGUAUC
AG-CGGUAGGGGAGC-AUUGUGU-AAG-CCUGC-GAAGGUC--G-ACCGCGAGGA--C-G
GCUGGAGGUA-UCA-CAAGAGAUUAUGC-UGACAU-GAGUA-GCGAAA--AUGC-GGGUG
A--G---------------AAACCC-GCA-CACCGA-AAACCC-AAGGGUUCC-UCAGUA
AAGGUAAUCUGCUGAGGGUUAGUCGGU-CC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUU-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACCACU----UGUC------GCU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGGAGAA-GGGU
AG-GCGAUCCGG-GU-G----CUGGA----CGUCCCGGU-UCAAGC-GUGUA-----G-G
-----CG-----GG------------------AA-GAG-GAGG-----------------
---CAAAU-CCCUUCUUCCAUACAACGCCA----AGGCG-U-G-AUG--AC---------
------------------------------------------------------GA----
-GGGGG-UAUCCCCACAAAG-UCGU-U-GAUCCCAUGCUUC-C-AAGAAA-AGCCUCUAA
GCUU--------------------------------------------------CAGGCG
G-CAGGUGACCGUACCGUAAACCGACUCAGGUG-GGUGAGGAUUAAUGUCCUAAGGU-G-
CUUGAG-AGAACACUG-GUUAAGGAACUCGGC-AAAUUGACACCGUAACUUCGG-GAGAA
GGUGUG-CCCU-C-AC-UAGGUGUAGCGA----------UUCGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------ACGU-GAA--GCCGAAGAG--GGUCGC
AGAGAAAUGGCGGUAGCGA-----CUGUUUACUAAAAACACAGGACUCUGCUAAGUCG--
--CA-A-------------GACGAUGU-AUAGGGUCUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAGGGGAUUUGUUA-GC-----GCAA-----GCGAAGCUUUGAACCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUU--UCCGCGCUGUCUCAACC----AGU-GG
CUCAGCGAAAUUGAAUUCUCGGUGAAGAUGCCGAGUACCCGCGGCAAGACGGAAAGA-CC
CCGUGAACC-UUUACUACAGCUUGACAGUGACAUUCGGAAUAGCUUGUGUAGGAU-AGGU
GGGAGGCUGUG---AAACCGG-GAC----------------------------GCCA---
-----------------------------------GU-UUCGGUGGAGCC-AA-CCUUGA
AAUA-CCACC-CUGGUUGUUUUGGAUGUCUAACCCAGG--CCCG-U-CAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UCGGGGACA-CUGUCUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCCA-AAGCGUAAC-GGAGGCGCGCGAAGGUUCCCU
CAGGCUGAUUGGAAACCAGCCGUA-GAGUG-CAAAGGCAU-AAGGGAGCUUGACU-GCGA
----------------------------------GACAGA---CACGUCGAGCAGGUACG
AAA-GUAGGCCUUAGUGAUCCGGC-----------GGU---UCUGU-AUG----------
----------GAAGGGCCGUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGAAGUCGGUCCCAAGGGUUUGGCUGUUCGCCAAUUAAAGCGGUACGCGA
GCUGGGUUUAAAACGUCGUGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGC-AGGAUACUU
GAGAAG-AGC-UGUCCUUAGUACGAGAGGAC-CGGGAUGGACGUACCUC-UAGUG-UUCC
AGUUGUUCCGCCAGGAGCAU-UCGCUGGGUAGCUAUGUACGGAAAGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCUCCUUCAA-G-AUUAGGUAUCC-CC---GGGAC------
-------------GC---------GA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GUC
CCCU--GA-AGG----CCCGUUGUAGACCACAACGU-UGAUAGGCC-GGGUGUGUAAG-C
AG-G----------------GU----------AA-----------CCUGCUCAGCUG--A
CCGGUACUAAUC--GGCCGUGAG-GCUUGACCAU
>Gloeobacter_violaceus
---UCAAGCUAC--ACAGGGCGUAC-GGUGGAUA-CCUAGGC-ACAGUC---AGCCGAUG
AAGGACGCGG-CUACCGGCGAAACGCGACGGGGAGCAGGAAGCAUGCUU-----UGAUC-
CGU-CGGUGUCCGAAUGGGGAAACCC---GG----CAUCC-U----------UAAC----
------A---G----G----G---UGUC-G-UCC--------------------------
------GCAA------------------------------------G-G-AC--GGGAAC
CAGGCGAAUUGAAACAUCUUAGUAGCCU--GAGGAAAAUAAAGUAA-AAACGAUUCCCUC
AGU-AG-CGGCGAGCGAACGGGGA-A-GA-GCCCAAACCGAU---GGGUUAC--------
-----------GA-CCU-GUCGGGG--UUG------------UAGGACA------GCUA-
UC----------------------UGGAG---------UGCG---U-------UUGCU-A
GGCG------AAU-GG-GUUG---------------------------------------
----GAAAA-CCCGA-------CCAAAGAAGGUGAUAGUCCUGUA---------CUCGAA
A--GCAA------A--CAAAC-----------CCU---GGCU--GAAU----CCUGAGUA
GCACGGGGCACGUGAAAUCCCGUGUGAA-UCUGCGAGG-ACC--AUCUCGUAAGGCUAAA
UA--CUG-UC-UGUGACCGAUAGC-G-AU-U-AGUACCGCGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAACAUGAAACCGUAUGCCUACAA-GCAGU-GGG
A---GCAC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------AUUUAA-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------CG--UGUGACCGCGUGCCUGUUGAAGAAUGAGCCGGCGAGUUAC
-G-GUCAGUGGCA--GGUUAAGCCG---------AAAA--------UGGCGGA--GCCAA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGC
-----------------------UAGUCACUGGUCGUA-GACCCGAAGCC-UGGUGAUCU
AACCAUGGCCAGGAUGAAGCUUGGGUAACA-CCAAGUGGAGGUCCGA--ACCGACUG-AU
GUUGAAAAAUCAGCGGAUGAGCUGUGGUUAGGGGUGAAAUGCCAAUCGAACUAGG-CGAU
AGCUGGUUCUCCCCGAAAUGUGUUUAGGCACAGCGUUAG-GUG-----------------
------------------------------------------------------------
-UUUA-UGGGCGGGGGUAGAGC-ACUGAUUCGG-UGC--GGGCUGC---GA-GA--GCGG
UACCAAAUCGAGCCAAACUCCGAAUACCGUC-----------------------------
------------------------------------------------------------
----------------------CAAC-A-UA------GCCUGGC-AGUGAGA-C-UGUG-
G-GGGAUAAGCUCCAU-GGUCGAGAG-GGAAAC---AGCCCAGACCACCAACUAAGGUCC
CCAAAU--UG-UAG-CU-CA---GU-GAU-------UAAGGAGGUGGGAUUGCACAGACA
ACCAGGAGGUUGGCCUAGAAGCAGCCA-CCCUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----AAGCGAUCCUGCGCCGAAAAUG-AAC-GGGGCU-A-AGCUACA----------UA
CCGAA-GUUGUGGAUUUA------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---UGGUAGGGGAGC-GUUCCGC-AGU-AGGAU-GAAGCGU--CAGCGACAAGCA--G-G
CGUGGACGAG-GCG-GAAGUGAGAAUGU-CGGCUU-GAGUA-GCGCAA--ACAU-UGGUG
A--G---------------AAUCCA-AUG-CUCCGA-AAGCAC-AAGGUUUCC-UCCGGA
AGGUUCGUCCGCGGAGGGUUAGCCGGG-AC-CUAAGGCGAAGCCG-A-A-GGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAU-AACAGGUG
-UAUA-UUCCUGUGCUGUG----UCGC------UGGA-----------------------
------------------------------------------------------------
------------------------------------GUGUCAAAGGGACGCAUGA-GGAU
AG-GCCAUACCC-UU-A----CUGGA----UUGGGGAGC---------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------UC----
--------CUACGGGAGCAG-UUUG-G-CCGAAAGUAGUGC-C-GAGAAA-AGCUUUGCC
ACAU---------------------------------------------------UGAAA
G-CACGCACCCGUACCCGAAACCGACACAGGUG-UGCAGGUA-GAGAAUACCAAGGA-G-
CGCGAG-AUAACCCUC-UUUAAGGAACUCGGC-AAAAUAGCCCCGUAACUUCGG-AAGAA
GGGGUG-CCCC-C-GC--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGGG--GGUCGC
AGUGAAAUGGCUCUGGCGA-----CUGUUUACCAAAAACACAGGUCUCUGCAAAGCCG--
--CA-A-------------GGCGACGU-AUAGGGGCUGA-CUCCUGCCCAGUGCCG-G-A
AGGUUACGGAAGUCGGUUA-GC-----GAAA-----GCGAAGCUGGCGACCUAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAAGGAGUAACGAUC--AGAGCGCUGUCUCGAAG----AGG-GA
CUCGGCGAAAUAGGAUUGUCUGUGAAGAUACGGACUACUUGUACCCGGACAGAAAGA-CC
CUAUGAAGC-UUUACUCUAGCUUGAAAUUGGGUUCGGGCUUUGUCUGCGCAGGAU-AGGC
GGGAGCCGGUG---AUACAUC-UCU----------------------------UGCG---
-----------------------------------GG-GGGUGUGGAGGC-AA-CGGUGA
GAUA-CCGCU-CUGACAGGGUCUGGAUUCUAACC-------------UACG---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------GGGACA-GUUUCAGGUGGG
GAGUUUGACUGGGGCGGU-CGCCUCCUA-AACGGUAAC-GGAGGCGCGCAAAGGUUCCCU
CAGGCUGGUCGGAAAUCAGCCGCA-GAGUG-UAAAGGCAU-AAGGGAGCUUGACU-GCGA
----------------------------------GACCUA---CAAGUCGAGCAGAGACG
AAA-GUCGGCCUUAGUGAUCCGAC-----------GGU---UCUGC-AUG----------
----------GAAGGGCCGUCGCUCAACGG-AUAAAAGUUACUCUAGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AACCUGGGGCGGUAGUACGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGU-----------------
---A-CAA--------------------------------------GCGC-AAGAGUGUU
GAGAGG-AGC-UCUCCCUAGUACGAGAGGAC-CGGGAGGGACUGACCGC-UGGUG-UACC
UGUUAUCGUGCCAACGGUAA-ACGCAGGGUAGCUAUGUCGGGAGUGGAUAACCGCUGAAA
GCA-UC--UAAGUGGGAAGCCCACCUCAA-G-AUGAGCACUCU-CU---CCGCA------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
AGGG--UA-AGA----CCACGGGAAGAUUACC-CGU-UAAUAGGCU-CUAGGUGGAAG-C
GC-A----------------GC----------AA-----------UGUGUGCAGCCG--A
GGAGUACUAAUA--GGUCGAG-G-GCUUGACUU-
>Gluconobacter_oxydans
G------------AGAAGGGCGUUC-GGUGGAUG-CCUUGGC-ACUAAG---AGGCGAUG
AAGGACGUGG-UACGCUGCGAAAAGCCAUGGGGAGCCGCGAACAGGCUU-----UGAUC-
CGU-GGAUGUCCGAAUGGGGCAACCC---CC----UC---------------GCAA----
------------------------GAGG-A-UCAU-GCA---CUGA--------------
------AUACA--------------------------UA-GGU-GUA-U-GA-GGCAAAC
CCGGGGAACUGAAACAUCUCAGUACCUG--GAGGAAAAGACAUCAA-CAGAGAUUCCGCU
AGU-AG-UGGCGAGCGAACGCGGA-G-CA-GGCCA-------------------------
----------------------------------------------AUG------C----
CU------------------------GAU-----------CA---G-------GAAGA-A
GCUG------AAC-GG-UCUG---------------------------------------
----GAAAG-UCCGG-------CAAGAAUGGGUGAUAGCCCCGUA---------AGCGUA
G--UGUU------C--UGAUG-----------------------AGGA----UUCGAGUA
GGGCGGGGCACGUGAAACCCUGUCUGAA-CAUGGGGGG-ACC--ACCCUCCAAGCCUAAA
UA--CUC-CUUAGUGACCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGAUGAGGGG-A-GUGAAAGAG-ACCUGAAACCGGACGCCUACAA-GCAGU-CGG
A---GCCU-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGACGGCGUACCUUUUGUAUAAUGGGUCAGCGAGUUUC
-U-GUUUGCAGCGA-GCUUAAGCC----------GUUA---------GGUGUA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
---------------------AUGAGUUGCUGGCAGAA-GACCCGAAACC-GAGUGAUCU
AGCCAUGGCCAGGCUGAAGGUGCGGUAACA-CGCACUGGAGGGCCGA--ACCCACGC-CU
GUUGAAAAAGUCGGGGAUGAGCUGUGGCUAGGGGUGAAAGGCCAAUCAAACUCGG-AGAU
AGCUGGUUCUCCGCGAAAUCUAUUGAGGUAGAUCGUCGG-GUG-----------------
------------------------------------------------------------
-UUUA-CCCUGGGGGGUAGAGC-ACUGGAUGGG-CUA--GGGGGGC---CCAAA--GCCU
UACCAAACCUAACCAAACUCCGAAUACCCAG-----------------------------
------------------------------------------------------------
----------------------GAGU-A-UA------GCCCGGC-AGACAGA-C-AGUG-
G-GUGCUAAGGUCCAU-UGUCGAGAG-GGAAAC---AGCCCAGACCACCAGCUAAGGCCC
CUAAAU--CG-UGG-CU-AA---GU-GGG-------AAAGGAUGUGGGGAUUCCAAAACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCGUAAUAGCUCACUGGUC
U--AUUAGAAACCCUGCGCCGAAAAUGUAAC-GGGGCUCA-AGCCACG----------UG
CCGAA-GCUGUGGGUGCAUACU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AUGUAUG
CG-CGGUAGCGGAGC-GUUCCGU-AAG-UCUGC-GAAGGAG--ACGGGGUGACCC--U-C
UCUGGAGAUA-UCG-GAAGUGCGAAUGC-UGACAU-GAGUA-GCGACA--AACA-GUGCG
A--G---------------AAACAC-UGU-CGCCGA-AAGUCC-AAGGGUUCC-UGCGCA
AGGUUAAUCCACGCAGGGUGAGCCGGC-CC-CUAAGGCGAGGGCG-A-G-AGCC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-ACCAGUUC
-AAUA-UUACUGGGCCUGC----CA-----------------------------------
------------------------------------------------------------
-----------------------------------------GAAGUGACGAAUGA-GAGA
-U-GUUGUCUGU-CC-U----UAACG----GAUUGAACA-GG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CUUU-U----CAA-UCAUUC-C-AGGAAAUAGCUCUGGC
------------------------------------------------------------
--GUAUAGACCGUACCCGAAACCGACACAGGUG-GACUGGUA-GAGAAUACCAAGGC-G-
CUUGAG-AGAACGAUG-CUGAAGGAACUAGGC-AAAUUGCUCGUGUAACUUCGG-GAUAA
ACGAGA-CCCG-C-UC--GUGGG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CAA--CCAUGGACG--GGUGGC
ACAGACCAGGGGGUAGCGA-----CUGUUUAGUAAAAACACAGGGCUCUGCGAAAUCG--
--UG-A-------------GAUGACGU-AUAGGGCCUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAGAGGAGGUGU----------GCAA----------GCACUGAAUUGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCACUGUCUCCAGC----AUC-GA
CUCAGCGAAAUUGAAUUCCCCGUGAAGAUGCGGGGUACCCGCGGUCAGACGGAAAGA-CC
CUAUGAACC-UUUACUGCAGCUUUGCAGUGGCAUCAGAGACAUUCUGUGUAGGAU-AGGU
CGGAGGCUUUG---AAACCCA-GGC----------------------------GCCA---
-----------------------------------GC-UUGGGUGGAGCC-AU-CCUUGA
AAUA-CGACC-CUGAAUUUUUCUGAUGUCUAACCGAGA--CCAG-U-AAGC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CU----GG--------------------
--------------------------------------UCCGGGACC-CUGCAUGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCCA-AAGUGUAAC-GGAGGCGCGCGAUGGUGGGCU
CAGGCCGGUCGGAAACCGGCUGUC-GAGUG-CAAUGGCAU-AAGCCCGCCUGACU-GUGA
----------------------------------GAGUGA---CAGCUCGAUCAGAGACG
AAA-GUCGGCCAUAGUGAUCCGGU-----------GGU---CCCAU-GUG----------
----------GACGGGCCAUCGCUCAACGG-AUAAAAGGUACUCUAGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUUCGGCUGUUCGCCGAUUAAAGUGGUACGUGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GUGU-AAGAGACUU
GAGAGG-AUU-UGUCCCUAGUACGAGAGGAC-CGGGAUGAACAUACCUC-UGGUG-CACC
GGUUGUCACGCCAGUGGCAC-A-GCCGGGUAGCUAAGUAUGGACGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACCCACCUCAA-A-ACGAGGUCUCA-U---------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------AGA----GCCGUGACAGACCAUCACGU-UGAUAGGCC-GGGUGUGAAAG-U
GC-A----------------GU----------AA-----------UGCAUGCAGCUA--A
CCGGUCCUAAUC--GCUCAUA-A-UCCUCACU--
>Haemophilus_influenzae
---UUAAGUGAC--UAAGCGUACAA-GGUGGAUG-CCUUGGC-AAUCAG---AGGCGAAG
AAGGACGUGC-UAAUCUGCGAAAAGCUUGGAUGAGUCGAUAAGAGGCGU-----UUAAU-
CCA-AGAUAUCCGAAUGGGGAAACCC---AG----UAGAU-G-----------AAG----
------A---A----U----C---UACU-A-UCAA-CAA---GUGA--------------
------AUUCA--------------------------UA-GCU-UGU-U-GA-GGCAAAC
CGGGAGAACUGAAACAUCUAAGUACCCC--GAGGAAAAGAAAUCAA-CCGAGAUUUCGUC
AGU-AG-CGGCGAGCGAAAGCGAA-A-GA-GCCAG-------------------------
----------------------------------------------UAA------G--U-
GA----------------------UAGCA-----------AU---A-------UAGUG-A
GGAG------AAU-GU-GUUG---------------------------------------
----GGAAG-CACAA-------UCAAAGAGGGUGAUAAUCCCGUA---------UCUAAA
A--ACCA------U--AUUGU-----------GGUACUAAGC--UAAC----GAGAAGUA
GGGCGGGACACGUGAUAUCCUGUUUGAA-GAAGGGGGG-CCC--AUCCUCCAAGGCUAAA
UA--CUC-CUGAUUGACCGAUAGU-GAAC-C-AGUACUGUGAAGGAAAG-GCGAAA-AGA
AC-CCCGGUGAGGGG-A-GUGAAAUAGAACCUGAAACCUUGUACGUACAA-GCAGU-GGG
A---GCGA-G---G----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------CCU--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAU
-A-UUUUGUAGCGA-GGUUAACC----------GAAUA----------GGGGA--GCCGA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAACU-------------------------GG-G-CGA
----------------------AUAGUUGCAAGGUAUA-GACCCGAAACC-CGGUGAUCU
AGCCAUGGGCAGGUUGAAGGUUGGGUAACA-CUAACUGGAGGACCGA--ACCGACUA-AU
GUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG-AGAU
AGCUGGUUCUCCCCGAAAUCUAUUUAGGUAGAGCCUUGA-GGU-----------------
------------------------------------------------------------
-GACA-CCUUUGGGGGUAGAGC-ACUGUUUCGG-CUA--GGGGGCC---AUCCC--GGCU
UACCAACCCGAUGCAAACUACGAAUACCAAA-----------------------------
------------------------------------------------------------
----------------------GAGU-G-AU------ACUCAGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGGAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CCAAGU--CU-AUA-UU-AA---GU-GGG-------AAACGAAGUGGGAAGGCUUAGACA
GCUAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUAGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCUGA-AAUAUAG----------CA
CCGAA-GCUGCGGCAUCAGAAU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------UUAUUCUG
UU-GGGUAGGGGAGC-GUUGUGU-AAG-CGGAA-GAAGGUU--C-AUCGAGAGGU--G-G
GCUGGACGUA-UCA-CAAGUGCGAAUGC-UGACAU-AAGUA-ACGAUA--AAAC-GGGUG
A--A---------------AAACCC-GUU-CGCCGG-AAGACC-AAGGGUUCC-UGUCCA
ACGUUAAUCGGGGCAGGGUGAGUCGGC-UC-CUAAGGCGAGGCUG-A-A-AAGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACUUGG----UAAA------GCU------------------------
------------------------------------------------------------
------------------------------------GCGAUGUGGGGACGGAGUA-GGUU
AG-GUUAUCGCA-CU-G----UUGGA----UAUGUGCGU-UUAAGU-UGGUA-----G-G
-----UG-----GG------------------AA-GUU-UAGG-----------------
---CAAAU-CCGGACUUCC--UUAACACAG----AGAGA-U-G-AUG--AC---------
------------------------------------------------------GA----
-GGCUC-UACGGAGCUGAAG-UAAC-U-GAUACCACACUUC-C-AGGAAA-AGCCACUAA
GCGA--------------------------------------------------AAGGCU
U-UACUAAACCGUACUGAAAACCGACACAGGUG-GUCAGGUA-GAGAAUACUCAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AAAAUAGCACCGUAACUUCGG-GAGAA
GGUGCG-CCGG-C-GU-AGAUUGUAAGGG----------CUAGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------CCCU-GAA--GGUUGAACC--GGUCGA
AGAUACCAGCUGGCUGCAA-----CUGUUUAUUAAAAACACAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-UGCCUGCCCGGUGCUG-G-A
AGGUUAAUUGAUGGUGUCA-UC-----GAAA-----GAGAAGCACCUGAUCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCAUAAUGAUG--GCCAGGCUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAAAUCGCCGUGAAGAUGCGGUGUACCCGCGGCUAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUGACACUGAACAUUGAAUUUUGAUGUGUAGGAU-AGGU
GGGAGCCUUUG---AAGCAGU-GAC----------------------------GCCA---
-----------------------------------GU-CAUUGUGGAGGC-GA-CCUUGA
AAUA-CCACC-CUUUAACGUUUGAUGUUCUAACGAAGA--UGAC-G-AAAC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------GU----GG--------------------
--------------------------------------UCUCGGACA-GUGUCUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGCGUAAC-GGAGGAGCACGAAGGUUUGCU
AAUCACGGUCGGACAUCGUGAGGU-UAGUG-CAAUGGUAU-AAGCAAGCUUAACU-GCGA
----------------------------------GACAGA---CAAGUCGAGCAGGUACG
AAA-GUAGGUCAUAGUGAUCCGGU-----------GGU---UCUGA-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-AGGAUGAUU
GAUUGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGCAUCAC-UGGUG-UUCC
GGUUGUGUCGCCAGACGCAU-U-GCCGGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAA
GCA-UC--UAAGCACGAAACUUGCCAAGA-G-AUGAGUCAUCC-CU---GACUU------
-----------------------UAA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GUC
AG----UA-AGG----GUUGUUGUAGACUACGACGU-AGAUAGGUU-GGGUGUGUAAG-U
GA-U----------------GU----------GA-----------GUCAUUGAGCUA--A
CCAAUACUAAUU--GCCCGAGAG-GCUUAACU--
>Helicobacter_hepaticus
A---AAAGCUUU--UAAGGGCAGAU-GGUGGAUG-CCUUGGG-UGAUAG---AGGCGAUG
AAGGACGUAC-UAGACUGCGAUAAGCUAUGGAGAGCUGUCAAGAAGCUU-----UGACC-
CAU-AGAUUUCCGAAUGGGGCAACCCAAUAC----CUA--------------GAGA----
--------------------U---AGGU-A-UUAC-------------------------
------CUUUA-----------------------------------A-U-GG-AGCGAAC
CUAGCGAAGUGAAACAUCUCAGUAGCUA--GAGGAAAAGAAAUCAA-ACGAGAUUCUCCU
AGU-AG-CGGCGAGCGAACGGGGA-A-GA-GGGCAAACCAGU---AGCU-----------
--------------UGCUACUGGGG--UUG-------------AGGACU------GCAA-
UA----------------------UCCAC---------UUGA---A-------UAAUUGA
GCAG------AAG-UA-UUUG---------------------------------------
----GAAAA-AUACA-------UCACAGAGGGUGAUAAUCCCGUA---------UGCGAA
G--GUUA------U--UCAUA-----------GGU---AGCA--GUAU----CCAGAGUA
GGUCAGGGCACGUGAAACCCGGACUGAA-GCAGGGGAG-ACC--ACUCUCCAACCCUAAA
UA--CUA-CUAUCACACCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CGCAGUGAGCGG-A-GUGAAAUAGAACCUGAAACCAUCUGCCUACAA-UCAUU-CAG
A---GCCC-U---AU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------G-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------AUUU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------A----
--------------UCAG--GGUGAUGGACUGCCUUUUGCAUAAUGAUCCUGCGAGUUGU
-G-GUAUCUGGCAA-GGUUAAGC-----------AAAC----------GCGAA--GCCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAA--------------------------GG-G-CGU
----------------------UUAGUCAGAUGCUGCA-GACCCGAAGCC-AAGUGAUCU
AUCCAUGGCCAAGUUGAAGCGAGUGUAAUA-GCUCGUGGAGGACUGA--ACUCGUAC-CC
AUUGAAACGGGUUGGGAUGAGCUGUGGAUAGGGGUGAAAGGCCAAACAAACUUGG-UGAU
AGCUGGUUCUCUUCGAAAUAUAUUUAGGUAUAGCCUCAA-GUG-----------------
------------------------------------------------------------
-AUAG-UAAUAGGGGGUAGAGC-UCUGAUUGGG-CUA--GGGCUGC---UCACC--GCGG
UACCAACCCCUGUCAAACUACGAAUACCUAU-----------------------------
------------------------------------------------------------
----------------------UACC-G-UA------UCUUGGG-AGUCAGG-C-GGUG-
G-GUGAUAAAAUCAAU-CGUCAAAAG-GGGAAC---AACCCAGACUACCAACUAAGGUCC
CAAAGU--UC-UAUUCU-AA---GU-GGA-------AAAUGAUGUGAAGUUACUUAGACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCGUAACAGCUCACUGGUC
-----UAGUGAUUUUGCGCAGAAAAUAUAAC-GGGGCU-A-AGAUAGA----------CA
CCGAA-GUUGUAGAUUGUGCUG--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------AUGCAC
AG-UGGUAGAAGAGC-GUUCGUA-UCA-GCGUU-GAAGGCA--UACCGGUAAGGA--G-U
GCUGGAGCGA-UGC-GAAGUGAGCAUGC-AGGAAU-GAGUA-GCGAUA--AAAG-UGGUG
A--G---------------AAUCCA-CUU-CGCCGA-AAAUCU-AAGGUUUCC-UACGCG
AUGCUCGUCAUCGUAGGGUUAGUCGGG-UC-CUAAGACAAGUCCG-A-A-AGGG----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAA-AAUGGGUU
-AAUA-UUCCCAUACCAAC----AUUA------GUGU-----------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGCAUAG-GGCU
AAAUGGCGUUAG-CU-G----AUGGA----AAUGCUAAU-UUAAGA-GCGUA-----G-A
-----U------UG------------------GA-GGA-AUGG-----------------
---AAAAU-CCGCCUCUGU-----AUUUGA----AACUC-C-AAUAGCUUC---------
------------------------------------------------------AAGCGA
GCUUCGGCUCAAUUGGAGUG-CCAU-U-GAUGCCGUCGUGC-C-AAGAAA-AGCCUCUAA
GUUU----------------------------------------------------AGCU
A-AUGUUGCCCGUACCGCAAACCGACACAGGUA-GAUGAGAU-GAGUAUUCUAAGGC-G-
CGUGAA-AGAACUCUG-GUUAAGGAACUCUGC-AAACUAGCACCGUAAGUUCGC-AAUAA
GGUGUG-CCUA-C-GC--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------AAGUA--GGUCUC
AGCAAAGAGUCCCUCCCGA-----CUGUUUACCAAAAACACAGCACUUUGCAAACUCG--
--UA-A-------------GAGGAAGU-AUAAGGUGUGA-CGCCUGCCCGGUGCUC-G-A
AGGUUAAGAGGAUUAGUUA-GCA----GCAA----UGCGAAGCUUUGAAUUGAAGCCC--
GAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGU-UA
AAUACCGACCUGCAUGAAUGGCGUAACGAGA--UGGGAGCUGUCUCAACC----AGG-GA
UUCAGUGAAAUUGUAGUGGAGGUGAAAAUUCCUCCUACCCGCGGCAAGACGGAAAGA-CC
CCGUGGACC-UUUACUACAGCUUGGCACUGCCGAUGGGAGCAUUAUGCGCAGGAU-AGGU
GGGAGGCUUUG---AAGUCUU-CAC----------------------------UCUG---
-----------------------------------GU-GGAGAUGGAGCC-AU-CGUUGA
GAUA-CCACC-CUUAAUGUUUCUGUCUGCUAACUGGCU--UAUG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CA----UA--------------------
--------------------------------------AGCAGGACA-AUGCCUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAAGUAAC-GGAGGCUUGCAAAGGUUGGCU
CAUUGCGGUUGGAAAUCGCAAGAA-GAGUG-UAAUGGCAU-AAGCCAGCCUGACU-GUAA
----------------------------------GACAAA---CAAGUCAAGCAGAGACG
AAA-GUCGGUCAUAGUGAUCCGGU-----------GAU---UCUGU-GUG----------
----------GAAGGGUCAUCGCUCAAAGG-AUAAAAGGUACCCCGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGCUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGGAGUAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGCGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-AGGAAAGUU
GAGGAG-AGC-UGUCCCUAGUACGAGAGGAC-CGGGAUGGACACGCCAC-UGGUG-UACC
AGUUGUUCUGCCAAGAGCAU-C-GCUGGGUAGCUACGCGUGGAUGUGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCAACUCCAA-G-AUAAACUUUCC-CU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------GA-AGG----UCGCAGCAAGACUAGCUGCU-UGAUAGGGU-AGAUGUGUAAG-C
AU-A----------------GU----------AA-----------UGUGUUUAGCUG--A
CUACUACUAAUA--GACCGCUUG-GCUUUUCUUU
>Legionella_pneumophila
---------------AAGCGCAAAC-GGUGGAUG-CCUUGGC-AGUAAG---AGGCGAAG
AAGGACGUGG-AAUCCUGCGAAAAGCUAUGGGGAGCUGGAAACGAGCGU-----UGAGC-
CAU-AGAUGUCCGAAUGGGGGAACCC---GG----CUGC-------------CGAU----
---------------G----C---GGUC-A-UUUG-CAU---UUGA--------------
------AUACA--------------------------UA-GGU--GC-A-AA-GGCGAAC
UCGGGGAACUGAAACAUCUAAGUACCCG--AAGGAAAAGAAAUCAA-GAGAGAUUCUCCA
AGU-AG-CGGCGAGCGAACGGGGA-G-GA-GCCUG-------------------------
----------------------------------------------GCG------U-GA-
UU----------------------UAUUA-----------UU---G-------AACUG-A
GUAG------AAC-AA-UUUG---------------------------------------
----GGAAA-GUUGG-------CGAUAGAGGGUGAAAGCCCCGUA---------UACGAA
A--GUUU------G--AUGAA-----------------------CUCA----CGCGAGUA
GGCCGGGACACGUGAAAUCCUGGUUGAA-GAUGGGUGG-ACC--AUCAUCCAAGGCUAAA
UA--CUA-CUUACUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCGGAGAGGGG-A-GUGAAAUAGAAUCUGAAACCGUUUGCGUACAA-GCAGU-GGG
A---GCAU-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GUUU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------UG--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGAGUUAC
-U-UUCAGUGGCGA-GGUUAACU----------GAAUA----------AGGGA--GCCGU
AGAGAAAU-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
-----------------------UAGUCGCUGGGAGUA-GACCCGAAACC-GGGCGAUCU
AGCCAUGUGCAGGAUGAAGGUUGGGUAACA-CCAACUGGAGGUCCGA--ACCGGGUA-AU
GUUGAAAAAUUAUCGGAUGACGUGUGGCUAGGAGUGAAAGGCUAAUCAAGCCCGG-AGAU
AGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGU-GAA-----------------
------------------------------------------------------------
--UGA-UUACUGGGGGUAGAGC-ACUGUUUCGG-CUA--GGGGGCU---GUCAU--GGCU
UACCAAACCGAUGCAAACUCCGAAUACCGGC-----------------------------
------------------------------------------------------------
----------------------UAAU-UGAA------UCACGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGGAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CCAAGU--AC-UAG-UU-AA---GU-GGG-------AAACGAUGUGGGAAGGCAUAGACA
GCCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCUAA-AACUAGU----------CA
CCGAA-GCUGCGGAUGUGCGCG--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------AAGGCGCA
CG-UGGUAGGGGAGC-GUUCUGU-AGG-CUGAU-GAAGGUG--C-AUUGAGAAGU--G-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-GAGUA-ACGAUA--AUGU-GGGUG
A--A---------------AAGCCC-ACA-CGCCGG-AAGUCC-CAGGUUUCC-UGCACG
ACGUUAAUCGGAGCAGGGUGAGUCGGC-CC-CUAAGGCGAGGCUG-A-A-GAGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-ACCAGGUU
-AAUA-UUCCUGGACUUUU----UAUA------A--------------------------
------------------------------------------------------------
------------------------------------GUGAAGUGGGGACGAAGAA-GGCU
AG-GUGAGCCAG-GC-G----UUGGU----UGUCCUGGU-ACUUGC-AUGUA-----G-G
-----GG-----GG------------------AA-GAC-UUGG-----------------
---CAAAU-CCGGUUUUCC--AUAACUCUG----AGGUG-C-G-AAG--UG---------
------------------------------------------------------GU----
-UCUGA-CCUUUUGGAGAAG-UCAU-U-GAUGCCCGGCUUC-C-AGGAAA-AGCUGCUAG
CCAU----------------------------------------------------AACU
U-AUAGGAACCGUACCGCAAACCGACACAGGUG-GACAGGUA-GAGAAUACUAAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AAAAUGGUACCGUAACUUCGG-GAGAA
GGUACG-CCCU-U-UC--UGGUGAUGGGA----------UUUAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------UUUC-AGA--GCUGGAGAG--GGCCGC
AGAGACCAGGUGGCUGCGA-----CUGUUUAUUAAAAACACAGCACUCUGCAAAUUCG--
--UA-A-------------GAAGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUUGAUGGGGUUA-UC-----UUCG-----GAGAAGCUCUUGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUG--GCCACACUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAAAUCGCUGUGAAGAUGCAGUGUACCCGCGGCUAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGUUUUGCACUGGACUUUGAUGAUGACUGUGUAGGAU-AGGU
GGGAGGCUGUG---AAGUGAG-GAC----------------------------GCUA---
-----------------------------------GU-UCUCAUGGAGCC-GC-CCUUGA
AAUA-CCACC-CUGUUGUUAUUGAGGUUCUAACUUGGU--CCAG-U-AAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CU----GG--------------------
--------------------------------------AUGAGGACA-GUGUAUGAUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGAGUAAC-GGAGGAGCACAAAGGUACCCU
CGGUACGGUCGGACAUCGUACCAA-GAGUG-UAAAGGCAA-AAGGGUGCUUGACU-GCGA
----------------------------------GAGUGA---CGGCUCGAGCAGGAACG
AAA-GUUGGUCUUAGUGAUCCGGU-----------GGU---UCUGA-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGCAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-AGGAAAAUU
GAGAGG-AGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAACCUC-UGGUG-CACC
GGUUGUCACGCCAGUGGCAU-G-GCCGGGUAGCUAAGUUCGGACGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCUCCCUCAA-G-AUGAGUUUUCC-CA--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AAG----CCCGUUGAAGACUACGACGU-UGAUAGGCA-AGGUGUGGAAG-C
GC-A----------------GU----------AA-----------UGCGUGAAGCUA--A
CUUGUACUAAUU--GGCUGAUUG-UCUUGACCAU
>Leifsonia_xyli
----CAAGUUUC--UAAGAGCAAAC-GGUGGAUG-CCUUGGC-AUCUGG---AGCCGAAG
AAGGACGUAG-UAAUCUGCGAUAAGCCUCGGGGAGUUGAUAAACGGACU----UUGAUC-
CGA-GGAUUUCCGAAUGGGGAAACCC---CG----CUGGG-CCC---------UUU----
----GGGUGAC----C----C---AGUG-A-CUCC-CGC---CUGA--------------
------AUAUA--------------------------UA-GGG-CGG-GUAG-AGGGAAC
GUGGGGAAGUGAAACAUCUCAGUACCCA--CAGGAAGAGAAAGCAA-AAGCGAUUCCGUU
AGU-AG-UGGCGAGCGAAACCGGA-A-GA-GGCUAAACCGAUC-AUGUGUGAUAGCCGG-
CAGG---CGU-UG-CAUGGUCGGGG--UUG------------CGGGACU------UUUC-
UGCUGC--UUCUGCCGAACAGCAAGCGUU---------ACAGA-GG-------AUCAU-A
GGUG------AAU-GG-CAUU---------------------------------------
----GAAAG-GCCAG-------UCAUAGAGGGUGCCAACCCCGUA---------ACCGAA
A--UGGU------C--CAAUG----------GUGCG--AAGA--GUAU----CCCAAGUA
GCACGGGGCCCGAGAAAUCUCGUGUGAA-UCUGUCAGG-ACC--ACCUGAUAAGCCUAAA
UA--CUC-CCAGAUGACCGAUAGC-GGAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGU
AC-CCCGG-GAGGGG-A-GUGAAAUAGUACCUGAAACCGUUUGCUUACAA-ACCGU-UGG
A---GCCU-C---C----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------AGG--GGUGACAGCGUGCCUUUUGAAGAAUGAGCCUGCGAGUUAG
UG-AUAUGUGGCGA-GGUUAACCC----------GUGA---------GGGGUA--GCCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
---------------------UUCAGUCGCAUGUCCUA-GACCCGAAGCG-AAGUGAUCU
AUCCAUGGCCAGGUUGAAGCGACGGUAAGA-CGUCGUGGAGGACCGA--ACCCACUU-AG
GUUGAAAACUGAGGGGAUGAGCUGUGGAUAGGGGUGAAAGGCCAAUCAAACUUCG-UGAU
AGCUGGUUCUCUCCGAAAUGCAUUUAGGUGCAGCGUUGC-GUG-----------------
------------------------------------------------------------
-UUUC-UUGCCGGAGGUAGAGCUACUGGAUGGC-CGA--UGGGCCC---CA-AA--AGGU
UACUGACGUCAGCCAAACUCCGAAUGCCGGU-----------------------------
------------------------------------------------------------
----------------------AAGUGA-GA------GCGCAGC-AGUGAGA-C-GGUG-
G-GGGAUAAGCUUCAU-CGUCGAGAG-GGAAAC---AACCCAGACCACCAACUAAGGUCC
CUAAGC--GC-GUG-CU-AA---GU-GGG-------AAAGGAUGUGGAGUUGCACAGACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUGAAAGAGUGCGUAACAGCUCACUGGUC
-----AAGUGAUUCCGCGCCGACAAUGUAAC-GGGGCUCA-AGCACGC----------CA
CCGAA-GUUGUGGCAUUAACAU-UAU----------------------------------
-------------------------------------------UGG--------------
----------UAGGCUUUCGU---------------------------------------
---------------------------------------------GGUCCAGCCGUGUUG
AU-GGGUAGGAGAGC-GUCGUGU-G-G-CGAGU-GAAGCGG--C-GGUGUGAACC-AG-C
CGUGGACGCC-ACA-CGAGUGAGAAUGC-AGGCAU-GAGUA-GCGAAA---GAC-GGGUG
A--G---------------AAACCC-GUC-CUCCGA-AAGACC-AAGGGUUCC-AGGGCC
AGGCUAAUCCGCCCUGGGUAAGUCGGG-AC-CUAAGGCGAGGCCG-A-C-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-AACGGGUU
-GAUA-UUCCCGUACCGGC----GAAG------AAC----------CGUCCAAGCUAAUC
CAGUGGUGCUAAGAGUCCUAAUCCUGGACACCGAUCCCUUCGGGGUGACGGUCCAGGUCU
AACGCUCGACCCCAUGCUGGUGCGGCUAGCGUAU--UAACAGGUGUGACGCAGGA-AGGU
AG-CUGUACCGG-GC-G----AUGGU----UGUCCCGGG-GUAAGG-AUGUA-----G-G
-----G------CG------------------AG-AGA-UAGG-----------------
---CAAAU-CCGUCUCUCA--CAUAGCCUG----AGAUC-U-U-AUG--CA---------
------------------------------------------------------UA----
-GCCGU-----CAAGGCGAA-UUCA-G-UGAUCCUAUGCUG-C-CAAGAA-AAGCAUCGA
CGCG---------------------------------------------------AGGUU
C-CAGCCGCCCGUACCCCAAACCGACUCAGGUG-GUCAGGUA-GAGAAUACUAAGGA-G-
AUCGAG-AGAAUCGUG-GUUAAGGAACUCGGC-AAAAUGCCCCCGUAACUUCGG-GAGAA
GGGGGG-CCUG---AG--GCGUGAAGGGA----------UUUAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------UCCU-GGA--GCGUUUGAA--GGCCGC
AGAGACCAGUGGGAAGCGA-----CUGUUUACUAAAAACACAGGUCCGUGCCAAGUCG--
--CA-A-------------GACGAUGU-AUACGGACUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAAGGGUUA-GC-----UUCG-----GCGAAGCUCAGAAUUUAAGCCC--
CAGUAAAC-GGCGGUGGUAACUAUAACCAUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCAGCUGUCUCAACC----ACG-AA
CUCGGCGAAAUUGCACUACGAGUAAAGAUGCUCGUUACGCGCAGCAGGACGGAAAGA-CC
CCG-UGACC-UUUACUAUAGUUUGGUAUUGGUGUUCGGUGUGGCUUGUGUAGGAU-AGGU
GGGAGACUUUG---AAGCGGG-CAC----------------------------GCCA---
-----------------------------------GU-GUUCGUGGAGUC-AU-UUUUGA
AAUA-CCACU-CUGGUCAUUCUGGAUAUCUAACUUAGA--ACCG-U-AAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GU--------------------
--------------------------------------UCAGGGACA-GUGCCUGAUGGG
UAGUUUAACUGGGGCGGU-UGCCUCCCA-AAAAGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAACCUGGUUGGCAAUCAGGUGUC-GAGUG-UAAGUGCAC-AAGGGAGCUUGACU-GUGA
----------------------------------GACUGA---CAAGUCGAGCAGGGACG
AAA-GUCGGGACUAGUGAUCCGGC-----------AGU---GGCUU-GUG----------
----------GAAGCGCUGUCGCUCAACGG-AUAAAAGGUACCUCGGGG-AUAACAGGCU
GAUCUUGCCCAAGAGUCCAUAUCGACGGCAUGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGGAGUAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGCU-----------------
---G-CGC--------------------------------------GCGC-AGGAAAUUU
GAGAGG-AUC-UGACCCUAGUACGAGAGGAC-CGGGUUGGACGAACCUC-UGGUG-UGCC
AGUUGUUCCGCCAGGAGCAC-C-GCUGGUUAGCUACGUUCGGGAUGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCGGCCUCAA-G-AUGAGAUUUCC-AC---GCC--------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------CGG
GCGA--GA-GGC----UCCCAGCUAGACUACUGGGU-UGAUAGGCC-GGAUGUGGAAG-U
GG-G----------------GACU-----AAAGA-----------CCCAUGGAGCUG--A
CCGGUACUAAUA--AGCCGAU-A-ACUUGAU---
>Listeria_monocytogenes
G-GUUAAGUUAG--AAAGGGCGCAC-GGUGGAUG-CCUUGGC-ACUAGG---AGCCGAAG
AAGGACGGGA-CUAACACCGAUAUGCUUUGGGGAGCUGUACGUAAGCGU-----UGAUC-
CAG-AGAUUUCCGAAUGGGGGAACCC---AC----UAUCU-U----------UAGU----
------C---G----G----A---UAGU-A-UCCU-UAC---GUGA--------------
------AUACA--------------------------UA-GCG-UGA-G-GAAGGCAGAC
CCAGGGAACUGAAACAUCUAAGUACCUG--GAGGAAGAGAAAGAAA-AAUCGAUUUCCUG
AGU-AG-CGGCGAGCGAAACGGAA-A-GA-GCCCAAACCAAG---AAGCUUG--------
--------------CUU-CUUGGGG--UUG------------UAGGACA------CUCUA
UA----------------------CGGAGUUACAAA--AGAA---A-------GUUAU-A
AAUG------AAGCGG-UCUG---------------------------------------
----GAAAG-GCCCG-------CCAAAGACGGUAACAGCCCGGUA---------GUUGAA
A--UAGC------U--UUCCC----------UCCA---GAGU--GGAU----CCUGAGUA
CGGCGGAACACGUGAAAUUCCGUCGGAA-UCCGGGAGG-ACC--AUCUCCCAAGGCUAAA
UA--CUC-CCUAGUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGG-AAGGGG-A-GUGAAACAGUUCCUGAAACCGUGUGCCUACAA-GUAGU-UAG
A---GCCC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------UG--GGUGAUAGCGUGCCUUUUGUAGAAUGAACCGGCGAGUUAC
-G-AUUUGUUGCAA-GGUUAAGCG---------GAAAA---------AGCGGA--GCCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGC
---------------------AUAAGUAACAGGUCGUA-GACCCGAAACC-AGGUGAUCU
ACCCAUGUCCAGGAUGAAGGUAAGGUAAUA-CUUACUGGAGGUCCGA--ACCCACGC-AC
GUUGAAAAGUGCGGGGAUGAGGUGUGGGUAGCGGAGAAAUUCCAAUCGAACUUGG-AGAU
AGCUGGUUCUCUCCGAAAUAGCUUUAGGGCUAGCCUCGA-GGUA----------------
------------------------------------------------------------
-AAGA-GUCAUGGAGGUAGAGC-ACUGUUUGGA-CUA--GGGGCCC---UUCUC--GGGU
UACCGAAUUCAGAUAAACUCCGAAUGCCAUG-----------------------------
------------------------------------------------------------
----------------------UACU-U-AU------ACUCGGG-AGUCAGA-C-UGCG-
A-GUGAUAAGAUCCGU-AGUCGAAAG-GGAAAC---AGCCCAGACCACCAGUUAAGGUCC
CCAAAU--AU-AUG-UU-AA---GU-GGA-------AAAGGAUGUGGGGUUGCUUAGACA
ACCAGGAUGUUGGCUUAGAAGCAGCCA-CCAUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----GAGUGACCCCGCGCCGAAAAUGUACC-GGGGCU-A-AACAUAU----------UA
CCGAA-ACUGUGGAUGAACCUC--------------------------------------
------------------------------------------------------------
--------------UU--------------------------------------------
----------------------------------------------------UAGAGGUU
CG-UGGUAGGAGAGC-GUUCUAA-G-G-GCGGU-GAAGUCA--G-ACCGGAAGGA--C-U
GGUGGAGCGC-UUA-GAAGUGAGAAUGC-CGGUAU-GAGUA-GCGAAA---GAA-GGGUG
A--G---------------AAUCCC-UUC-CACCGA-AUAUCU-AAGGUUUCC-UGAGGA
AGGCUCGUCCGCUCAGGGUUAGUCGGG-AC-CUAAGCCGAGGCCG-A-U-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GGC-GA-U--GGAC-AACAGGUA
-GAGA-UUCCUGUACCAGU----GCUA------AUU----------GUUUAA--------
------------------------------------------------------------
------------------------------------CCGAUGGGGUGACACAGAA-GGAU
AG-GGAAUCGCA-CG-A----AUGGA----AAUGUGCGU-CCAAGC-AGUGA-----G-U
-----G------UG------------------AG-AAG-UAGG-----------------
---CAAAU-CCGCUUCUCG--CGAAGCAUG----AGCUG-U-G-AUG--GG---------
------------------------------------------------------GA----
-AGGAAAUUAAGUACGGAAG-UUCC-U-GAUUUCACGCUGU-C-AAGAAA-AGCCUCUAG
GA-----------------------------------------------------AGAGU
A-GUACUGCCCGUACCGCAAACCGACACAGGUA-GAUGAGGA-GAGAAUCCUAAGGU-G-
AGCGAG-AGAACUCUC-GUUAAGGAACUCGGC-AAAAUGACCCCGUAACUUCGG-GAGAA
GGGGUG-CUCUAU-UA--GGGUG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CAA--GCCCGAGAG--AGCCGC
AGUGAAUAGGCCCAGGCGA-----CUGUUUAGCAAAAACACAGGUCUCUGCAAAACCG--
--UA-A-------------GGUGACGU-AUAGGGGCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGUGCUUA-GC-----UUCG-----GCGAAGGUACGAAUUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGCGCAACGAUC--UGGGCACUGUCUCAACG----AGA-GA
CUCGGUGAAAUUAUAGUACCUGUGAAGAUGCAGGUUACCCGCGACAGGACGGAAAGA-CC
CCGUGGAGC-UUUACUGCAACCUGAUAUGGAAUGUUUGUACCGCUUGUACAGGAU-AGGU
AGGAGCCGAAG---AGACGUG-UGC----------------------------GCUA---
-----------------------------------GC-AUACGAGGAGGC-AA-UGGUGG
GAUA-CUACC-CUGGCUGUAUGACCAUUCUAACCCGCC--ACGC-U-UAGC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------GC----GU--------------------
--------------------------------------GGGGAGACA-GUGUCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAGAGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGAAUGGAUGGAAAUCAUUCGCA-GAGUG-UAAAGGCAC-AAGGGAGCUUGACU-GCGA
----------------------------------GACUGA---CAAGUCGAGCAGGGACG
AAA-GUCGGGCUUAGUGAUCCGGU-----------GGU---UCCGC-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGCUACCCCGGGG-AUAACAGGCU
UAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUC-----------------
---G-CGG--------------------------------------GCGC-AGGAAAUUU
GAGAGG-AGC-UGUCCUUAGUACGAGAGGAC-CGGGAUGGACACACCGC-UGGUG-UACC
AGUUGUUCCGCCAGGAGCAU-C-GCUGGGUAGCUAUGUGUGGCAGGGAUAAACGCUGAAA
GCA-UC--UAAGCGUGAAGCCCCCCUCAA-G-AUGAGAUUUCC-CA---UUUCU------
-------------UC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------------GG
AAAG--UA-AGA----UCCCUGAAAGAUGAUCAGGU-AGAUAGGUU-UGGAGUGGAAG-U
GU-A----------------GC----------GA-----------UACAUGGAGCGG--A
CAAAUACUAAUC--GAUCGAG-G-ACUUAACCA-
>Magnetococcus_sp.
A-AGUAAAC-----GAAGGGCAUAC-GGUGGAUG-CCUUGGU-GCCAAG---AGGCGAUG
AAGGACGUAG-CACGUUGCGAUAAGCUUCGGAGAGCCGCGAGCAGGCUU-----UGACC-
CGG-AGAUUUCCGAAUGGGGAAACCC---GG----CGGGA-U-----------GAA----
------A---U----C----C---CGUC-A-CUAC-UAG---CUGA--------------
------AUAAA--------------------------UA-GGC-UAU-U-AG-AGCGAAC
GCGGGGAACUGAAACAUCUAAGUACCCG--UAGGAACAGAAAUCAA-UUGAGAUUCCCUA
AGU-AG-CGGCGAGCGAACGGGGA-C-CA-GGCCA-------------------------
----------------------------------------------GUA------U----
CA-------------------------UA-----------AA---U-------CAUUU-A
GCCG------AAC-CA-ACUG---------------------------------------
----GAAAG-UUGGA-------CCAUAGUGGGUGAAAGUCCUUUA---------GGUGAA
A--GGGC------G--UGUAU-----------GA-----GGG--AUAC----GAAGAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-CAUGGGGGG-CCC--UCCCUCCAAGCCUAAA
UA--CUA-CUUGGCAACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCGAUAAGGGG-A-GUGAAAUAGAACCUGAAACCGUAUGCUUACAA-GCAGU-CGG
A---GGCU----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------GAUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------G--CCUGACGGCGUACCUUUUGUAUAAUGGGUCAGCGAGUUAA
-U-CUGCGUAGCAA-GCUUAAGC-----------GAAA----------GUGUA--GGCGA
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
----------------------UAAGUUUCGUAGAUUA-GACCCGAAACC-GAGUGAUCU
ACCCAUGGUCAGGUUGAAGGUGCGGUAACA-CGCACUGGAGGACCGA--ACCCACCU-AU
GUUGAAAAAUGGGGGGAUGAACUGUGGGUAGGAGUGAAAGGCUAAACAAACUCGG-AAAU
AGCUGGUUCUCUCCGAAAACUAUUUAGGUAGUGCCUCGA-AUU-----------------
------------------------------------------------------------
--GGC-AUGCCGGGGGUAGAGC-ACUGGAUGGG-CUA--GGGGGGC---CCAAA--GCCU
UACCAAACCUAACCAAACUCCGAAUACCGGU-----------------------------
------------------------------------------------------------
----------------------CAGUUA-UA------GUUCGGG-AGACAGA-C-UGCG-
G-GUGCUAAGGUCCGU-AGUCGAGAG-GGAAAA---AGCCCAGACCAUCAUCUAAGGUCC
CCAAGU--CA-UAC-UU-AA---GU-GGG-------AAAGGAUGUGGGAAUGCCCUGACA
GCCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUGGUCCUGCGCCGAAAAUAUAAC-GGGGCUCA-AAGUAUG----------CA
CCGAA-GAUAUGGAUGCCGCG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AGG
CA-UGGUAGGAGAGC-GUUCCGU-AAG-CCGUU-GAAGCCG--U-ACCGAGAGGA--G-C
GGUGGAGGUA-UCG-GAAGUGAGAAUGC-UGACAU-GAGUA-ACGAUA--AUCA-AGGUG
A--G---------------AAUCCU-UGA-CGCCGA-AAACCC-AAGGUUUCC-UACGCA
AGGCUAUUCCGCGUAGGGUUAGUCGGC-CC-CUAAGGUGAGGCAU-A-C-AUGC----GU
A-----------------------------------------------------------
-------------------------------------ACC-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACCUCU----UAUA------ACU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGGAGAA-GGAU
AG-AUCUACCGG-GC-G----UUGGU----AGUCCCGGG-ACAAGC-GUGUA-----G-G
-----U------UG------------------ACAGAC-UAGG-----------------
---UAAAU-CCGGACUGUU----AAGACUG----AGGCG-U-G-AUG--UG---------
------------------------------------------------------------
-GAGCCA---CUAGGCGAAC-UGAU-U-GAUUCCAAGCUUC-C-AAGAAA-AGCCUCUAA
GCUU--------------------------------------------------CAGGUU
A-UGAGAGACCGUACCCCAAACCGACACAGGUG-GGUGGGAU-GAGAAUUCUAAGGC-G-
UGUGAG-AGAACUCUG-GUAAAGGAACUCGGC-AAAU--GCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUC-U-UG-UAUGUGAAGGCC----------UUUAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GGCU-GGA--GCAGAAGGG--GGCCGC
AGUGACUAGGGGGGAGCGA-----CUGUUUACCAAAAACAUAGGACUCUGCUAAAUCG--
--CA-A-------------GAUGAAGU-AUAGGGUCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGGGGU----------GCAA----------GCUCUGAAUCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCGCUGUCUCUAUC----AGA-GG
CUCAGUGAAAUUGAAUUUGCUGUGAAGAUGCAGCAUACCCGCGGCAAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUUGCAUUGGUACUAGAGACAGUUUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGCGUG-AGC----------------------------GCCA---
-----------------------------------GC-UCAUGUGGAGCC-AC-CCUUGA
AAUA-CCACC-CUGGCUCUCUUUGGUAUCUAACUGCGC--GCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GC--------------------
--------------------------------------GUCAGGACA-GUGCAUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCCA-AACAGUAAC-GGAGGCGCACGAUGGUUCGCU
CAGGUUGGUCGGAAAUCAACCGUA-GAGUG-UAAUGGCAU-AAGCGAGCCUGACU-GUGA
----------------------------------GACUGA---CAAGUCGAGCAGGUACG
AAA-GUAGGUCAUAGUGAUCCGGC-----------GAU---UCCGA-GAG----------
----------GAAGGGUCGUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGUAGUUGGUCCCAAGGGUUUGGCUGUUCGCCAAUUAAAGCGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU--GGAAAAUU
GAGAGG-AUC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACAAGCCUC-UGGUG-UUCG
GGUUGUCGUGCCAACGGCAU-C-GCCCGGUAGCUACGCUUGGAAGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACCCACCUCAA-G-AUGAAUUUUCC-CU---A----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGA----UCCGUGGAAGACCACCACGU-UGAUAGGCA-GGAUGUGGAAG-U
GG-G----------------GU----------AA-----------CCCAUGCAGCUA--A
CCUGUACUAAUC--GAUCCACUG-ACUUCUA---
>Magnetospirillum_magnetotacticum
---UCAAGCGUC-AAAAGGGCAUUU-CGUGGAUG-CCUUGGC-ACUGAG---AGGCGAUG
AAGGACGUGG-CACUCUGCGAAAAGCCACGGGGAGCCGAGAGCAGGCUU-----UGAUC-
CGU-GGAUAUCCGAAUGGGGAAACCC---CA----CC---------------GUAA----
------------------------GGUG-A-UCCC-ACA---CUGA--------------
------AUACA--------------------------UA-GGU-GUG-G-GA-GGCGAAC
CGGGCGAACUGAAACAUCUAAGUAGCCC--GAGGAAAGGACAUCAA-CCGAGACUCCGCU
AGU-AG-UGGCGAGCGAACGCGGA-C-CA-GCCCA-------------------------
----------------------------------------------GUG------A----
UG------------------------UUG-----------UG---U-------ACAUA-A
UCUG------AAC-CG-UCUG---------------------------------------
----GAAAG-UCGGG-------CCAUAGAGCGUGAUAGCCGCUUA---------AGAGUA
A--ACCG------C--ACAG------------------------CAUC----CUCGAGUA
AGGCGGGACACGUGAAAUCCUGUCUGAA-CAUGGGGGG-ACC--ACCCUCCAAGGCUAAG
UA--CUC-CUCAGUGACCGAUAGC-GAAC-U-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGACAAGGGG-A-GUGAAAUAGUACCUGAAACGGAAUGCCUACAA-GCAGU-CGG
A---GCCC-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CUUG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGACGGCGUACCUUUUGUAUAAUGGGUCAGCGAGUUAG
-U-GUAUGCAGCAA-GCUUAAGCC----------GGUA---------GGCGUA--GGCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
----------------------CGAGUUGCAUGCAUUA-GACCCGAAACC-GGGUGAUCU
AGCCAUGGGCAGGUUGAAGGUGGGGUAACA-CCCACUGGAGGACCGA--ACUCACGU-CU
GUUGAAAAAGACGGAGAUGACCUGUGGUUAGGGGUGAAAGGCCAAUCAAACUCGG-AAAU
AGCUGGUUCUCCGCGAAAGCUAUUUAGGUAGCGCCUCGG-ACG-----------------
------------------------------------------------------------
-AAUA-CCUACGGGGGUAGAGC-ACUGGAUGGG-CUA--GGGGGUC---CCAAA--GACC
UACCAAACCUAACCAAACUCCGAAUACCGUA-----------------------------
------------------------------------------------------------
----------------------GAGU-A-CU------AUCCGGG-AGACAGA-C-GGUG-
G-GUGCUAAGGUCCAU-CGUCAAAAG-GGAAAC---AGCCCAGACCGCCAGCUAAGGUCC
CCAAGU--CA-UGG-UU-AA---GU-GGG-------AAAGGAUGUAAGACGGCCAAAACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCGUAAUAGCUCACUGGUC
UAA--UAGCUGUCUCGCGCCGAAAAUGUACC-GGGGCUCA-AACCAUG----------CA
CCGAA-GCUGCGGGUGUGCAGC--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------AAUGCA
CG-CGGUAGCGGAGC-GUUCCGU-AAG-CCUGC-GAAGGCG--UCAUCGUGAGAG--G-C
GCUGGAGGUA-UCG-GAAGUGAGAAUGC-UGACAU-GAGUA-GCGACA--AACA-GUGUG
A--G---------------AAACAC-UGU-CGCCGA-AAGUCC-AAGGGUUCC-UGCGCA
AGGCUAAUCCGCGCAGGGUAAGCCGGC-CC-CUAAGGCGAGGGCG-A-A-AGCC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-ACCACGUU
-AAUA-UUCGUGGGCCUGC----UG-----------------------------------
------------------------------------------------------------
-----------------------------------------GAAGUGACGACCUC-CGUG
-U-AUCGUAUCC-UC-U----UAUCG----GAUUGAGGG-UG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CGGU-G----AA--GGGGGU-C-CAGGAA-AUAACUCCA
GC----------------------------------------------------------
--GUAUAGACCGUACCCUAAACCGACACAGGUG-GACUGGUA-GAGUAUACCAAGGC-G-
CUUGAG-AGAACGAUG-UUGAAGGAACUAGGC-AAAUUGACCCCGUAACUUCGG-GAUAA
GGGGUA-CCUC-U-CU--UUGCG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CAA--GCAGAGGGG--GGUGGC
ACAGACCAGGGGGUGGCGA-----CUGUUUACUAAAAACACAGGGCUCUGCGAAGUCG--
--AA-A-------------GACGACGU-AUAGGGUCUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAAAGGAGGGGU----------GCAA----------GCUCUGAAUUGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCGCUGUCUCCAAC----AUC-GA
CUCAGCGAAAUUGAAUUCUCCGUGAAGAUGCGGAGUACCCGUGGCUAGACGGAAAGA-CC
CCGUGCACC-UUUACUACAGCUUUGCAGUGGUACUAGGAUGUGGAUGUGUAGGAU-AGGU
GGGAGCCUAUG---AAGCACC-GGC----------------------------GCCA---
-----------------------------------GC-UGGUGUGGAGGC-AA-CCUUGA
AAUA-CCACC-CUUCUGCUUCCUGGUAUCUAACCGCGC--CCCG-UGAACC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------GCCGGGACC-CUGCAUGGCGGG
UAGUUUGACUGGGGCGGU-CGCCUCCCA-AAGAGUAAC-GGAGGCGCGCGAUGGUGGGCU
CAGGCUGGUCGGAAAUCAGCUGUC-GAGUG-CAAUGGCAU-AAGCCCGCCUGACU-GCGA
----------------------------------GACAAA---CAAGUCGAGCAGAGACG
AAA-GUCGGUCAUAGUGAUCCGGU-----------GGU---CCCGC-GUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUUCGGCUGUUCGCCGAUUAAAGUGGUACGUGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUACC-----------------
---A-UGG--------------------------------------GUGU-UGGAAACUU
GAGAGG-ACC-UGUCCCUAGUACGAGAGGAC-CGGGAUGGACAUACCUC-UAGUG-UACC
GGUUGUCGCGCCAGCGGCAU-C-GCCGGGUAGCCAUGUAUGGACGAGAUAACCGCUGAAU
GCA-UC--UAAGCGGGAAGCUCCCCUCAA-A-ACCAGGUUUCC-CU---A----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UC-AGA----GCCGUGGAAGACCACCACGU-UGAUAGGCA-GCAUGUGGAAG-C
GU-G----------------GU----------AA-----------CACGUGAAGCUA--A
GCUGUACUAAUC--GCUCGAUCG-GCUUGAUCGC
>Mesoplasma_florum
G-------------UAAGGGCACAU-GGUGAAUG-CCUUGGA-AAAUGG---AGCCGAAG
AAGGACGUGA-UUACCUGCGAAAAGCAUCGGGGAGCUGGAAGUGAGCUU-----UGAUC-
CGG-UGAUAUCCGAAUGGGGAAACCC---AA----UACGA-U----------UAAU----
------C---U----C----G---UAUU-A-UCCA-UAA---GUGA--------------
------AUACA--------------------------UA-GCU-UAU-GAGA-AGGGAAC
CUUGGGAACUGAAACAUCUUAGUACCAA--GAGGAAAAGAAAAUAAAUAAUGAUUCUGUU
AGU-AG-CGGCGAGCGAAAGCGGA-A-GA-GGCCAAACCAG----UCU---A--------
--------------CGG-GCUGGGG--UUG------------UAGGACA------UCUU-
UU----------------------UAGAGUUACAAA--AUCA---A-------CAUAU-A
GUAG------AAG-UU-ACUG---------------------------------------
----GGAAG-UAACG-------GCAUAGAGGGUGAUACCCCCGUA---------UACGAA
A--UGUG------U--UGAUC----------UCUU---AGAU--GGAU----CCUGAGUA
CGGCGAAACACGUGAAAUUUUGUCGGAA-UCCGCCGAG-ACC--ACUCGGCAAGCCUAAA
UA--CUC-CCAUUUUACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGU
AC-CCCGA-GAGGGG-A-GUGAAAUAGUUCCUGAAACCAUGUGCUUACAA-GAAGA-UAG
A---GCCC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------UG--GGUGAUAUCGUGCUUUUUGUAGAAAGAGCCGGCGAGUUAA
-U-GUAUCGUGCGA-GGUUAAGCA---------GAAUA---------UGCGGA--GCCGU
AGUGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGCCU--------------
----------------------UAAUA-------------------------GG-G-CGU
----------------------UUAGUACGUUGCAUUA-GACACGAAACC-GGGUGAUCU
AGCCAUGAGCAGGUUGAAGUUUGGGUAAAA-CCAAAUGGAGGACCGA--ACCGACGU-UC
GUUGAAAUGACCGCGGAUGACUUGUGGCUAGCGGUGAAAUUCCAAUCGAACCCGG-AGAU
AGCUAGUUCUCCCCGAAAUAUAUUUAAGUAUAGCGUCGA-GGUU----------------
------------------------------------------------------------
-UACC-ACAAUGGAGGUAGAGC-ACUGAAUCUA-UGA--UGGCCCC---ACCUA--GGGG
UACUGAAUAGAAUUAAACUCCGAAUGCCAUU-----------------------------
------------------------------------------------------------
----------------------GUCG-G-AU------ACUCGGC-AGUCAGA-A-CAUG-
G-GUGAUAAGGUCCAU-GCUCGAGAG-GGAAAC---AGCCCAGAUCGUCAGCUAAGGUCC
CUAAAU--UU-AGG-UU-AA---GU-GUG-------UAAGGAUGUGGAAUUGCACAGACA
GCUAGGAUGUUGGCUUAGAAGCAGCCA-CCAUUUAAAGAGUGCGUAACAGCUCACUAGUC
-----GAGUGAUUCUGCGCCGAAAAUGUACC-GGGGCU-A-AACCUAA----------UA
CCGAA-GCUACGGAUUGAUUUU--------------------------------------
------------------------------------------------------------
--------------U---------------------------------------------
------------------------------------------------------AAAUAC
AG-UGAUAGGGGAGC-GUUCUAA-U-U-GUGAU-GAAGUCA--G-ACUGUGAGGA--C-U
GGUGGAACGA-UUA-GAAGUGAUUAUGC-CGGCAU-GAGUA-ACGAU----UGA-AUGUG
A--G---------------AAUCAU-UCA-UACCGU-UUGACC-AAGGUUUCC-UGGGCA
AGGUUCGUCCACCCAGGGUUAGUCAGG-AC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-AACAGGUU
-GAUA-UUCCUGUACCUGC----UA--------GUU----------A-------------
------------------------------------------------------------
------------------------------------GUGAUGGAGUGACGGAGAA-AGGU
AGUGUAUCCCAG-GU-G----AUGGA----UGUCCUGGG-UUAAGC-ACAAA-----G-G
-----C------GG------------------CA-ACA-UAGG-----------------
---CAAAU-CCGUGUUGUA--UAAACGCUG-----GUUA-U-G-AGGA-GU---------
------------------------------------------------------GAAC--
-GGUUCG-CCUAGUAACGAA-GUAC-A-UGACCCUACGCUU-C-CAAGAA-AAGCUUCUA
ACUU---------------------------------------------------AAUAA
C-UAGUAGCCUGUACCUAUAACGAACACACGUG-GUCAAGGA-GAAAAUCCUAAGGU-A-
AGCGAG-AUAACUGUA-GCUAAGGAACUCUGC-AAAAUAACUCCGUAACUUCGG-AAGAA
GGAGUG-CUCA-A-CG--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------CAAGUUG--AGCCGC
AGUGAAGAGGGAGGGGCAA-----CUGUUUAGCAAAAACACAGCUCUCUGCUAAGUCG--
--CA-A-------------GACGAAGU-AUAGGGGGUGA-CGCCUGCCCAGUGCCG-G-A
AGGUUAAGAGGAGAAGUCA-GC-----GCAA-----GCGAAGCUUCGAAUUGAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCAGG-UA
AGUUCUGACCCGCACGAAAGGCGUAAUGAUC--CCUUCGCUGUCUCGGCU----GCA-GA
CUCGGUGAAAUUUUAGUACCGGUGAAGAUGCCGGUUACCCGCAACUAGACGGAAAGA-CC
CCGUGGAGC-UUUACUAUAACUUGAUAUUGAAAUUUGGUAUAACGUGUAGAGGAU-AGGU
GGGAGACUUUG---AAGCUGG-ACC----------------------------GCUA---
-----------------------------------GG-GCCAGUGGAGUC-AA-CCUUGG
AAUA-CCACC-CUCGUUAUAUUGGAUUUCUAACUUCGA--CCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UUAAGGACA-GUGUCUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAUGUAAC-GGAGGCGCUCAAAGUUACACU
CAGCAUGGUUGGAAAUCAUGCAUA-GAGCG-CAAAAGUAU-AAGUGUGAUUGACU-GUGA
----------------------------------GACUUA---CAAGUCGAACAGGUACG
AAA-GUAGGAUUUAGUGAUCCGGC-----------GGU---CCCGU-GUG----------
----------GAAGGGCCGUCGCUCAACGG-AUAAAAGUUACCCCGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGAGCUGUAGUCGGUUCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUUGGUCCCUAUCUGUU-----------------
---G-UGG--------------------------------------GCGU-AGGAAAAUU
GAAGAG-AGC-UGUUCCUAGUACGAGAGGAC-CGGAAUGGACACACCUC-UGGUG-CUCC
UGUUGUCACGCCAGUGGCAC-A-GCAGGGUAGCUAUGUGUGGAACGGAUAAUCGCUGAAG
GCA-UC--UAAGCGAGAAGCCUCCUUUAA-G-AUGAAUUUUCC-CA---UUUCU------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------------AG
AAUG--UA-AGA----UCCCUUAUAGACUAUGAGGU-UGAUAGGAU-GGAUGUGUAAG-U
GU-C----------------GC----------GA-----------GGCAUUAAGCUA--A
CCAUUACUAAUA--GAUCGAGAG-AAUUUUAG--
>Mycobacterium_leprae
A-AGUAAGUGCC--UAAGGGCGCAU-GGUGGAUG-CCUUGGC-AUCGAG---AGCCGAUG
AAGGACGUGG-GAGGCUGCGAUAUGCCUCGGGGAGCUGUCAACCGAGCG----UGGAUC-
CGA-GGAUUUCCGAAUGGGGAAACCC---AA----CACGAGU-----------CAU----
------G---U----C----G---UGUU-A-CCCG-UAU---CUGA--------------
------AUAUA--------------------------UA-GGG-UUC-G-GG-AGGGAAC
GCGGGGAAGUGAAACAUCUCAGUACCCG--UAGGAGAAGAAAACAA-UUGUGAUUCCGCA
AGU-AG-UGGCGAGCGAACGUGGA-A-UAUGGCUAAACCGCAC-ACAUGUCUAACUAGG-
UAGG---GGU-UG-UGUGUGCGGUG--UUG------------UGGGAUU------GGUA-
UGUCUCAACUCUACCUGGUUGAGGGGUAGUCAGAAA--GUGC--CG-------UGGUU-A
GCGG-A----AAU-GG-CCUG---------------------------------------
----GGAUG-GCCUG-------CCGUAGACGGUGAGAGCCCAGUA---------CGCGAA
A--GCCU------G--GCACC----------UGCCUUGUAUC--AAUU----CCCGAGUA
GCAGCGGGCCCGUGGAAUCUGCUGUGAA-UCUGCCGGG-ACC--ACCCGGUAAGCCUAAA
UA--CUU-CUCGAUGACCGAUAGC-GGAU-C-AGUACCGUGAGGGAAUG-GUGAAA-AGU
AC-CCCGG-GAGGGG-A-GUGAAAUAGUACCUGAAACCGUGUGCCUACAA-UCCGU-CAG
A---GCCU-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UUUGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGAUGGCGUGCUUUUUGAAGAAUGAGCCUGCGAGUCAG
GG-ACAUGUCGCGA-GGUUAACCC----------GUGU---------GGGGUA--GCCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
---AUCACGUGUGAG--CGUGUGUAGUGGCGUGUUCUG-GACCCGAAGCG-GAGUGAUCU
ACCCAUGGCCAGGGUGAAGCGCGGGUAAGA-CCGCGUGGAGGCCCGA--ACCCACUU-AA
GUUGAAGAUUGAGGGGAUGAGUUGUGGGUAGGGGUGAAAGGCCAAUCAAACUCCG-UGAU
AGCUGGUUCUCCCCGAAAUGCAUUUAGGUGCAGCGUUGC-GUG-----------------
------------------------------------------------------------
-GUUC-ACCACGGAGGUAGAGCUACUGGAUGGC-CGA--UGGGCCC---UA-CU--AGGU
UACUGACGUCAGCCAAACUCCGAAUGCCGUG-----------------------------
------------------------------------------------------------
----------------------GUUUAA-AA------GCGUGGC-AGUGAGA-C-GGCG-
G-GGGAUAAGCUCCGUACGUCGAAAG-GGAAAC---AGCCCAGAUCGCCGGCUAAGGCCC
CUAAGC--GU-GUG-CU-AA---GU-GGA-------AAAGGAUGUGCAGUCGCAAAGACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----AAGUGAUUGUGCGCCGAUAAUGUAGC-GGGGCUCA-AGCACAC----------CG
CCGAA-GCCGCGGCACAUUCAC--------------------------------------
------------------------------------------------------------
--------------CUU-------------------------------------------
-------------------------------------------------CUAGGGUGGAU
GU-GGGUAGGGGAGC-GUUCCUC-A-U-UCAGC-GAAGCCU--C-CGGGUAACCG--G-U
GGUGGAGGGU-GGG-GAAGUGAGAAUGC-AGGCAU-GAGUA-GCGAUA--AGGC-AAGUG
A--G---------------AACCUU-GCC-CGCCGU-AAGACC-AAGGGUUCC-UGGGCC
AGGCCAGUCCGCCCAGGGUGAGUCGGG-AC-CUAAGGCGAGGCCG-A-C-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-AACGGGUU
-GAUA-UUCCCGUACCCGU----GUGU------GUG----------CGCCCGUGAUGAAU
CAGCGGUACUCACCACCCAAAACCGGAUCGACCAUAUCCCCUUCGGGGGCUAUGGAGGUU
CGGGGCUGCGUGGGAACUUCGUUGGUAGUAGUCAA-GCGAUGGGGUGACGCAGGA-AGGU
AG-CCGUACCAG-UC-A----GUGGU----AAUACUGGA-GCAAGC-CCGUA-----G-G
-----G------AG------------------AG-CGA-UAGG-----------------
---CAAAU-CCGUCGUUCG--UGAAUCCUG----AGAGG-U-G-AUG--CA---------
------------------------------------------------------UA----
-GCCGAU----UGAGGCGAA-UUCG-G-UAAGCCUCUGCUG-C-CAAGAA-AAGCCUCUA
GCGA---------------------------------------------------GCAUA
C-AUGCGGCCCGUACCCCAAACCGACACAGGUG-GUCAGGUA-GAGCAUACCAAGGC-G-
UACGAG-AUAACUAUG-GUUAAGGAACUCGGC-AAAAUGCCUCCGUAACUUCGG-GAGAA
GGGGGG-CCGG-A-AU-AUCGUGAACACC----------CUUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------GGUG-GGA--GCGGGAUCC--GGUCGC
AGAGACCAGUGAGAAGCGA-----CUGUUUACUAAAAACACAGGUCCGUGCGAAGUCG--
--UA-A-------------GACGAUGU-AUACGGACUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGAGGACCUGUUA-ACCC---GAAA---GGGUGAAGCGGAGAAUUUAAGCCC--
CAGUAAAC-GGCGGUGGUAACUAUAACCAUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCUCAACUGUCUCAACC----AUA-GA
CUCGGCGAAAUUGCACUACGAGUAAAGAUGCUCGUUACGUGCGGCAGGACGAAAAGA-CC
CCG-GGACC-UUCACUACAACUUGGUAUUGAUGUUCGGUGCGGUUUGUGUAGGAU-AGGU
GGGAGACUGUG---AAACUUC-GAC----------------------------GCUA---
-----------------------------------GU-UGGGGUGGAGUC-GU-UGUUGA
AAUA-CCACU-CUGAUUGUAUUGAACAUCUAACCUCGA--ACCG-UAUAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GU--------------------
--------------------------------------UUAGGGACA-GUGCCUGGCGGG
UAGUUUAACUGGGGCGGU-UGCCUCCUA-AAAUGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAACCUGGUCGGUAAUCAGGUGGC-GAGUG-UAAAUGCAC-AAGGGGGCUUGACU-GCGA
----------------------------------GACCUA---CACGUCAAGCAGGGACG
AAA-GUCGGGAUUAGUGAUCCGGC-----------ACC---UCUGA-GUG----------
----------GAAGGGGUGUCGCUCAACGG-AUAAAAGGUACCCCGGGG-AUAACAGGCU
GAUCUUCCCCAAGAGUCCAUAUCGACGGGAUGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGAAGCAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCUCUAUCCGCC-----------------
---G-CGC--------------------------------------GCGU-CAGAAACUU
GAGGAA-AUC-UGUCCCUAGUACGAGAGGAC-CGGGACGGACGAACCUC-UGGUA-UACC
AGUUGUCUCACCAGGGGCAC-C-GCUGGAUAGCCACGUUCGGACAAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACCUUCUCCAA-G-AUCAGGUUUCU-UA---CCCAC------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GGU
GGGA--UA-AGG----CCCCCCGCAGAACACGGGAU-UGAUAGGUC-AGACCUAGAAG-C
UC-A----------------GU----------AA-----------UGAGUGUAGGGA--A
CUGGCACUAACU--GGCCGAA-A-GCUUACAAAA
>Neisseria_gonorrhoeae
----------------AGUGCAUCA-GGCGGAUG-CCUUGGC-GAUGAU---AGGCGACG
AAGGACGUGU-AAGCCUGCGAAAAGCGCGGGGGAGCUGGCAAUAAAGCA----AUGAUC-
CCG-CGGUGUCCGAAUGGGGAAACCC---AC----UGCAU-------------UCU----
----------G----U----G---CAGU-A-UCCU-AAG---UUGA--------------
------AUACA--------------------------UA-GGC-UUA-GAGA-AGCGAAC
CCGGAGAACUGAACCAUCUAAGUACCCG--GAGGAAAAGAAAUCAA-CCGAGAUUCCGCA
AGU-AG-UGGCGAGCGAACGCGGA-G-GA-GCCUG-------------------------
----------------------------------------------UAC------G----
UAA---------------------UAACU-----------GU---C-------GAGGU-A
GAAG------AAC-AA-GCUG---------------------------------------
----GGAAG-CUUGA-------CCAUAGCGGGUGACAGUCCCGUA---------UUCGAA
A--UCUC------A--ACAGC--------GGUACU---AAGC--GUAC----GAAAAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-AUCAUCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAACAGAACCUGAAACCUGAUGCAUACAA-ACAGU-GGG
A---GCGC-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------CUAGU------------------
------------------------------------------------------------
------------------------------------------------------------
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------------------------------------------------------------
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------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAACGACUUAC
-A-UUCAGUAGCGA-GCUUAACC----------GGAUA----------GGGGA--GGCGU
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAUA-------------------------GG-G-CGA
----------------------UGAGUUGCUGGGUGUA-GACCCGAAACC-GAGUGAUCU
AUCCAUGGCCAGGUUGAAGGUGCCGUAACA-GGUACUGGAGGACCGA--ACCCACGC-AU
GUUGCAAAAUGCGGGGAUGAGCUGUGGGUAGGGGUGAAAGGCUAAACAAACUCGG-AGAU
AGCUGGUUCUCCCCGAAAACUAUUUAGGUAGUGCCUCGA-GCAA----------------
------------------------------------------------------------
-GACA-CUGAUGGGGGUAAAGC-ACUGUUAUGG-CUA--GGGGGUU---AUUGC--AACU
UACCAACCCAUGGCAAACUCAGAAUACCAUC-----------------------------
------------------------------------------------------------
----------------------AAGU-GGUU------CCUCGGG-AGACAGA-C-AGCG-
G-GUGCUAACGUCCGU-UGUCAAGAG-GGAAAC---AACCCAGACCGCCGGCUAAGGUCC
CAAAUG--AU-AGA-UU-AA---GU-GGU-------AAACGAAGUGGGAAGGCACAGACA
GCCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUCGUCCUGCGCGGAAGAUGUAAC-GGGGCUCA-AAUCUAU----------AA
CCGAA-GCUGCGGAUGCCGGUU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------UACCGG
CA-UGGUAGGGGAGC-GUUCUGU-AGG-CUGAU-GAAGGUG--C-AUUGUAAAGU--G-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGU-UGACAU-GAGUA-GCGAUA--AAGC-GGGUG
A--A---------------AAGCCC-GCU-CGCCGA-AAGCCC-AAGGUUUCC-UACGCA
ACGUUCAUCGGCGUAGGGUGAGUCGGC-CC-CUAAGGCGAGGCAG-A-A-AUGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACUUGA----UUCA------AAU------------------------
------------------------------------------------------------
------------------------------------GCGAUGUGGGGACGGAGAA-GGUU
AG-GUUGGCAAG-CU-G----UUGGA----AUAGCUUGU-UUAAGC-CGGUA-----G-G
-----UG-----GA------------------AG-ACU-UAGG-----------------
---CAAAU-CCGGGUUUUC--UUAACACCG----AGAAG-U-G-AUG--AC---------
------------------------------------------------------GA----
-GUGUC-UACGGACACGAAG-CAAC-C-GAUACCACGCUUC-C-AGGAAA-AGCCACUAA
GCUU--------------------------------------------------CAGUUU
G-AAUCGAACCGUACCGCAAACCGACACAGGUG-GGCAGGAU-GAGAAUUCUAAGGC-G-
CUUGAG-AGAACUCGG-GAGAAGGAACUCGGC-AAAUUGAUACCGUAACUUCGG-GAGAA
GGUAUG-CCCU-C-UA--AGGUUAA-GGA----------CUUGC----------------
------------------------------------------------------------
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------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------UCCG-UAA--GCCCCGGAG--GGUCGC
AGAGAAUAGGUGGCUGCGA-----CUGUUUAUUAAAAACACAGCACUCUGCCAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUUGAAGAUGU----------GCAA----------GCAUCGGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAUGGCGUAACGAUG--GCCACACUGUCUCCUCC----CGA-GA
CUCAGCGAAGUUGAAGUGGUUGUGAAGAUGCAAUCUACCCGCUGCUAGACGGAAAGA-CC
CCGUGAACC-UUUACUGUAGCUUUGCAUUGGACUUUGAAGUCACUUGUGUAGGAU-AGGU
GGGAGGCUUGG---AAGCAGA-GAC----------------------------GCCA---
-----------------------------------GU-CUCUGUGGAGUC-GU-CCUUGA
AAUA-CCACC-CUGGUGUCUUUGAGGUUCUAACCCAGA--CCCG-U-CAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UCGGGGACC-GUGCAUGGUAGG
CAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGCGUAAC-GGAGGAGUUCGAAGGUUACCU
AGGUCCGGUCGGAAAUCGGACUGA-UAGUG-CAAUGGCAA-AAGGUAGCUUAACU-GCGA
----------------------------------GACCGA---CAAGUCGGGCAGGUGCG
AAA-GCAGGACAUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUUCCGCCCAAGAGUUCAUAUCGACGGCGGAGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGUGA
GCUGGGUUUAAAACGUCGUGAGACAGUUUGGUCCCUAUCUGCA-----------------
---G-UGG--------------------------------------GCGU-UGGAAGUUU
GACGGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAACCUC-UGGUG-UACC
GGUUGUAACGCCAGUUGCAU-A-GCCGGGUAGCUAAGUUCGGAAGAGAUAAGCGCUGAAA
GCA-UC--UAAGCGCGAAACUCGCCUGAA-G-AUGAGACUUCC-CU---UGCGG------
-------------UU--------UAA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------CCG
CACU--AA-AGG----GUCGUUCGAGACCAGGACGU-UGAUAGGUG-GGGUGUGGAAG-C
GC-G----------------GU----------AA-----------CGCGUGAAGCUA--A
CCCAUACUAAUU--GCCCGUGAG-GCUUGACUCU
>Nitrosomonas_europaea
G-AUCAAGUGAA--UAAGUGCAUGU-GGUGGAUG-CCUUGGC-GAUUAC---AGGCGAUG
AAGGACGUGG-AAGCCUGCGAAAAGCUUCGGGGAGCUGGCAAACAAGCU----UUGAUC-
CGG-AGAUGUCCGAAUGGGAAAACCC---AC----CC---------------GUAA----
------------------------GGGU-A-AUCA-CUC---CUGA--------------
------AUAUA--------------------------UA-GGGAGAU-G-AU-GGCUAAC
CUGGAGAACUGAAACAUCUAAGUAACCA--GAGGAAAAGAAAUCAA-CAGAGAUUCCCAG
AGU-AG-UGGCGAGCGAAAUGGGA-C-CA-GCCUG-------------------------
----------------------------------------------CAG------U----
UAA---------------------UAAUA-----------UU---U-------AGACU-A
ACCG------AAU-UA-UCUG---------------------------------------
----GAAAG-UUAAA-------CCGUAGUGGGUGAUAGUCCCGUA---------GGUGAA
A--GUCU------G--AAUGU--------GGAACU---AAGA--UUGC----AAUAAGUA
GGGCGGGGCACGUGUAAUCCUGUCUGAA-UAUAGGGGG-ACC--AUCCUCUAAGGCUAAA
UA--CUC-GUAAUCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAUCCUGAAACCGCAUGCAUACAA-ACAGU-AGG
A---GCCU-U--------------------------------------------------
------------------------------------------------------------
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--------------------------------------GAAA------------------
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------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GA--GGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-A-UUCAGUAGCGA-GCUUAACC-----------GAUA----------GGGGA--GGCGU
AGUGAAAA-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAUA-------------------------GG-G-CGA
----------------------UAAGUUGCUGGGUGUA-GACCCGAAACC-AGAUGAUCU
ACUCAUGGCCAGGAUGAAAGGAGGGUAAUG-CCUCGUGGAGGUCCGA--ACCCACUA-AU
GUUGAAAAAUUAGGGGAUGAGCUGUGGGUAGGGGUGAAAGGCUAAACAAAUCUGG-AAAU
AGCUGGUUCUCUCCGAAAACUAUUUAGGUAGUGCCUCAU-AUA-----------------
------------------------------------------------------------
--UUA-CCUUUGGGGGUAGAGC-ACUGUUAUGG-CUA--GGGGGUC---GUCAA--GAUU
UACCAAACCAUUGCAAACUCCGAAUACCAAA-----------------------------
------------------------------------------------------------
----------------------GAGU-GCAA------GUAUGGG-AGACAGA-C-AUCG-
G-GUGCUAACGUUCGG-UGUCGAAAG-GGAAAC---AACCCAGACCUUCAGCUAAGGUCC
CAAAGA--UA-CAG-UU-AA---GU-GGU-------AAACGAAGUGGGAAGGCAUAGACA
GUCAGGAAGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCGUAAUAGCUCACUGAUC
-----GAGUCGUCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AACUGUA----------CA
CCGAA-GCUAAGGAUUUGCAAU--------------------------------------
------------------------------------------------------------
--------------U---------------------------------------------
----------------------------------------------------UAAUUGCA
AG-UGGUAGGAGAGC-GUUCCGU-AAG-CCUGU-GAAGGUA--A-CUUGUGAAGG--U-U
GCUGGAGGUA-UCG-GAAGUGCGAAUGC-UGACAU-GAGUA-GCGAUA--AAGG-AAGUG
A--A---------------AAGCUU-CCU-CGCCGA-AAACCC-AAGGUUUCC-UGUGCA
ACGUUCAUCGGCGCAGGGUUAGUCGGU-CC-CUAAGGUGAGGUAG-A-A-AUAC----GU
A-----------------------------------------------------------
-------------------------------------GCU-GA-U--GGGA-AACUGGUU
-AAUA-UUCCAGUACCUUU----AUUU------AAU------------------------
------------------------------------------------------------
------------------------------------GCGAUGUGGGGACGAAGAA-GGCU
AG-CUUAGCCGG-GU-G----UUGGA----UGUCCCGGU-UGAAGC-AGGUA-----G-A
-----CA-----UG------------------CU-AUU-UAGG-----------------
---CAAAU-CCGGAUAGCU--U---AGUCG----AGAUG-U-G-AUA--AC---------
------------------------------------------------------GAAAC-
-CUCUU-UCGGGAGGCCAAG-UAAG-U-AAUGCCAUGCUUC-C-AGGAAA-AGCCACUAA
GCUU--------------------------------------------------CAGUUA
A-AUAAAGACCGUACCGUAAACCGACACAGGUG-GGUGGGAU-GAGAAUUCUAAGGC-G-
CUUGAG-AGAACUCAG-GAGAAGGAACUCGGC-AAAUUGACACCGUAACUUCGG-GAGAA
GGUGUG-CCUC-U-AG-UAUGUGUAGUGC----------UACAC----------------
------------------------------------------------------------
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------------------------------------------------------------
---------------------------------GCAU-GAA--GCAGAAUGA--GGUUGC
AAAGAAAUGGUGGCUGCGA-----CUGUUUAAUAAAAACACAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAGUGAUGGGGU----------GCAA----------GCUCUUGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUG--GCCACACUGUCUCCUCC----UGA-GA
CUCAGCGAAGUUGAAAUGUUUGUGAAGAUGCAAUCUACCCGCGGCUAGACGGAAAGA-CC
CCGUGCACC-UUUACUGUAGCUUUACAUUGGAUUUUGAUUAUUCUUGUGUAGGAU-AGGU
GGGAGGCUGUG---AAAUAUG-CUC----------------------------GCCA---
-----------------------------------GA-GUGUAUGGAGCC-AA-CCUUGA
AAUA-CCACC-CUGGAAUGAUCGGAGUUCUAACCCAGG--UCCA-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GA--------------------
--------------------------------------UCGGGGACC-GUGUAUGGUAGG
CAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGAGUAAC-GGAGGAGUGCGAAGGUACGCU
AGGUACGGUCGGAAAUCGUACUGA-UAGUG-CAAUGGCAU-AAGCGUGCUUAACU-GCGA
----------------------------------GACUGA---CAAGUCGAGCAGAUGCG
AAA-GCAGGUCAUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUUCCUCCCAAGAGUUCAUAUCGACGGGGGAGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGUGA
GCUGGGUUUAAAACGUCGUGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UGGAAAUUU
GAGUGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGCACCUC-UGGUG-UACC
GGUUAUGACGCCAGUCGUAU-C-GCCGGGUAGCUAAGUGCGGAAGAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUUGCCAUAA-G-AUUAGAUUUCC-C----GGGAA------
-------------UU--------UAA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UUC
CCCU--AA-AGG----UUCGUUGAAGACUACAACGU-UGAUAGGUC-GAAUGUGUAAG-C
GU-A----------------GU----------AA-----------UGCGUUAAGCUA--A
UCGAUACUAAUU--GACCGUGAG-GCUUGAUCCU
>Novosphingobium_aromaticivorans
---UGAGG------UAAGAGCAUUU-GGUGGAUG-CCUUGGC-AUGUAC---AGGCGAUG
AAGGACGUGG-CACGCUGCGAUAAGCGUCGGGGAGUUGUGAGCAAACUU-----UGAUC-
CGG-CGAUUUCCGAAUGGGGAAACCC---AC----CUUCA-CCAU-------UUCU----
---GAGG---U----G----GAUAAGGU-A-UCCC-AGA---UUGA--------------
------AUACA--------------------------UA-GAU-CUG-GUGA-AGCGAAC
CCGGGGAACUGAAACAUCUCAGUACCUG--GAGGAAAAGACAUCAA-CCGAGAUUCCGUU
AGU-AG-UGGCGAGCGAACGCGGA-C-CA-GGCCA-------------------------
----------------------------------------------GUG------C----
CU------------------------CAU-----------CU---U-------CAACU-A
GCAG------AAC-AC-UUUG---------------------------------------
----GAAAG-AGUGG-------CCAUAGCGGGUGACAGCCCCGUA---------UGCGAA
A--GUGA------U--GGAUG-----------------------AGGA----CUCGAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-CAUGGGGGG-ACC--ACCCUCCAAGCCUAAA
UA--CUC-GUACAUGACCGAUAGC-GAACAC-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGAUGAGGGG-A-GUGAAACAGUACCUGAAACCGAAUGCUUACAA-GCAGU-UGG
A---GCCU-C--------------------------------------------------
------------------------------------------------------------
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-------------------------------------UUUAG------------------
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------------------------------------------------------------
----------------GG--GGUGACAGCGUACCUCUUGCAUAAUGGGUCAGUGACUUAG
-U-UUAUCGAGCAA-GCUUAAGCC----------GUUA---------GGUGUA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGC
---------------------UGAAGUUCGAUGAAUUA-GACCCGAAACC-CGGUGAUCU
AGGCAUGACCAGGCUGAAGGUGCGGUAACA-CGCACUGGAGGGCCGA--ACCGUUGA-AU
GUUGAAAAAUUCUCGGAUGAGUUGUGUUUAGGGGUGAAAGGCCAAUCAAACCGGG-AAAU
AGCUGGUUCUCCGCGAAAUCUAUUGAGGUAGAGCGUCGA-AUG-----------------
------------------------------------------------------------
-UAUG-CCUCUGGGGGUAGAGC-ACUGGAUGGA-UGC--GGGGGUC---GC-GA--GAUC
UACCAAUUCUAACCAAACUCCGAAUACCAGA-----------------------------
------------------------------------------------------------
----------------------GAGA-C-UU------GUUCGGC-AGACAGA-C-GGCG-
G-GUGCUAAGGUCCGU-CGUCAAAAG-GGAAAC---AGCCCUAACCUACAGCUAAGGUCC
CCAAGU--CA-UCA-CU-AA---GU-GGG-------AAAGCAUGUGGGAAUCCCAAAACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCGUAACAGCUCACUGGUC
UAAACAAGGGUUCCUGCGGCGAAGAUGUAAC-GGGGCUAA-AGUGAUG----------CA
CCGAA-GCUUAGGGUGUGAUCU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------UCGGAUCA
CG-CGGUAGCGGAGC-GUUCCGU-AAG-CCUGU-GAAGCGG--U-CUGGUAAUGG--G-C
CGUGGAGGUA-UCG-GAAGUGCGAAUGC-UGACAU-GAGUA-GCGACA--AAGA-GGGUG
A--G---------------AUGCCC-UCU-CGCCGA-AAGACC-AAGGGUUCC-UGCUUA
AAGCUAAUCUGAGCAGGGUGAGCCGGC-CC-CUAAGACGAGCCCG-A-A-GGGG----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-ACCACGUU
-AAUA-UUCGUGGGCCUGG----UGG----------------------------------
------------------------------------------------------------
-----------------------------------------UGUGUGACGGAUCA-CGUG
-U-GUUGUCUGG-CC-U----UAUUG----GAUUGGUCA-GG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CUUC-G----AA--GUGGUU-C-CAGGAA-AUAGCCCCA
CC----------------------------------------------------------
--GUAUAGACCGUACCCGAAACCGACACAGGUG-GUCAGGUA-GAGUAUACCAAGGC-G-
CUUGAG-AGAAGUAUC-CUGAAGGAACUCGGC-AAAUUGCCUCCGUACCUUCGG-AAGAA
GGAGGC-CCAA-C-CU--GUGCG-------------------------------------
------------------------------------------------------------
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--------------------------------------CAA--GCACUUGUU--GGGGGC
ACAGGCCAGGGGGUAGCGA-----CUGUUUAGCAAAAACACAGGACUCUGCUAAGUCGGC
UUCA-A-------------GACGACGU-AUAGGGUCUGA-CGCCUGCCCGGUGCUC-G-A
AGGUUAAGAGGAGGAGU----------GCAA----------GCUCCGAAUUGAAGCCC--
GAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCACUGUCUCCAGG----AUA-UG
CUCAGCGAAAUUGAAUUCUCCGUGAAGAUGCGGAGUACCCGCGGUUAGACGGAAAGA-CC
CCGUGCACC-UUUACUGCAGCUUCAGAGUGGCAUUAGGAAAGAAUUGUGUAGCAU-AGGU
GGGAGGCUUUG---AAGCACC-GGC----------------------------GCCA---
-----------------------------------GC-UGGUGUGGAGCC-AU-AGGUGA
AAUA-CCACC-CUGUUGUUUUCUGAUGUCUAACCCAGG--ACCG-U-UAGC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GU--------------------
--------------------------------------UCGGGGACC-CUCUGUGGCGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAGAGUAAC-GGAGGCGCGCGAUGGUAGGCU
CAGGCCGGUUGGAAACCGGCUGUUAGAGUG-CAAUGGCAU-AAGCCUGCCUGACU-GCGA
----------------------------------GACUGA---CGAGUCGAGCAGAGACG
AAA-GUCGGUCAUAGUGAUCCGGU-----------GGU---CCCUC-GUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUGAUUCCCAAGAGCUCAUAUCGACGGAAUCGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUUUGGCUGUUCGCCAAUUAAAGUGGUACGUGA
GCUGGGUUCAGAACGUCGCGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-C-GAUACUU
GAGAGG-AGU-UGCCCCUAGUACGAGAGGAC-CGGGGUGAACAUGCCUC-UGGUG-UACC
UGUCGUUCCGCCAGGAGCGC-A-GCAGGGUAGCUAUGCAUGGACGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCUCCCUCAA-G-AUAAGGUAUCA-UC--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------GA----GUCGUGGUAGACCACCACGU-UGAUAGGCC-GGGUGUGGAAG-U
GC-G----------------GU----------AA-----------CGCAUGAAGCUA--A
CCGGUCCUAAUA--ACUCU-----GUUCAUGCUU
>Oceanobacillus_iheyensis
A-GUUAAGUGAA--UAAGGGCGCAC-GGUGGAUG-CCUUGGC-ACUAGG---AGCUGACG
AAGGACGGGA-CUAACACCGAUAUGCCUCGGGGAGUUGUAAGUAAACUU-----UGAUC-
CGG-GGAUUUCCGAAUGGGGAAACCC---AC----UGUUCGU-----------AAU----
------G---G----A----G---CAGU-A-CCUA-UAC---CUCA--------------
------AUACA--------------------------UA-GGG-UAU-A-GGGAGCAGAC
CCGGGGAACUGAAACAUCUCAGUACCUG--GAGGAAGAGAAAGAAA-CCUCGAUUUCCUG
AGU-AG-CGGCGAGCGAAACGGAA-A-GA-GCCCAAACCAGA---AAGCUUG--------
--------------CUU-UCUGGGG--UUG------------UAGGACA------CUCC-
UU----------------------UGGAGUUACAAA--GAAA---U-------UCUUU-A
AAUG------AAUCGA-UCUG---------------------------------------
----GAAAG-GUCAG-------CCAAAGAAGGUAACAGCCCUGUA---------AUUGAA
A--AGGA------A--UUUCC----------UCCG---GAGU--GUAU----CCUGAGUA
CGGCGGAACACGUGGAAUUCCGUCGGAA-UCCGGGAGG-ACC--AUCUCCCAAGGCUAAA
UA--CUC-CCUAGUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGG-AAGGGG-A-GUGAAAUAGAACCUGAAACCGUGUGCCUACAA-GUAGU-CGA
A---GCCC-G--------------------------------------------------
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--------------------------------------UUAA------------------
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------------------------------------------------------------
------------------------------------------------------------
----------------UG--GGUGACGGCGUACCUUUUGUAGAAUGGACCGGCGAGUUAC
-G-AUCCCAUGCAA-GGUUAAGUG---------GAAGA---------CACGGA--GCCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
--------------------AUAUAGUAUGUGGUCGUA-GACCCGAAACC-GUGUGAUCU
ACCCAUGUCCAGGGUGAAGGUCAGGUAACA-CUGACUGGAGGCCCGA--ACCCACGU-AU
GUUGAAAAAUGCGGGGAUGAGGUGUGGGUAGGGGUGAAAUGCCAAUCGAACACGG-AGAU
AGCUGGUUCUCUCCGAAAUAGCUUUAGGGCUAGCCUCAA-GAUG----------------
------------------------------------------------------------
-AUGA-GUACUGGAGGUAGAGC-ACUGAUUGGA-CUA--GGGGCCC---CUACC--GGGU
UACCGAAUUCAGUCAAACUCCGAAUGCCAGU-----------------------------
------------------------------------------------------------
----------------------UACU-U-AA------ACUUGGG-AGUCAGA-C-UAUG-
G-GUGAUAAGGUUCAU-AGUCGAAAG-GGAAAC---AGCCCAGACCGCCAGCUAAGGUCC
CAAAGU--AU-ACG-UU-AA---GU-GGA-------AAAGGAUGUGGAGUUGCCCAGACA
ACCAGGAUGUUGGCUUAGAAGCAGCCA-CCAUUUAAAGAGUGCGUAAUAGCUCACUGGUC
-----GAGUGACUCUGCGCCGAAAAUGUACC-GGGGCU-A-AACGUAU----------CA
CCGAA-GCUGCGGAUUGUUCUU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------ACGAAC
AA-UGGUAGGAGAGC-GUUCUAA-G-U-GCUGC-GAAGUCA--G-ACCGUGAGGA--C-U
GGUGGAGCGC-UUA-GAAGUGAGAAUGC-CGGUAU-GAGUA-GCGAAA---AAA-GAGUG
A--G---------------AAUCUC-UUU-CACCGA-AUGCCU-AAGGUUUCC-UGAGGA
AGGCUCGUCCUCUCAGGGUUAGUCGGG-AC-CUAAGCCGAGGCCG-A-U-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GGC-GA-U--GGAC-AACAGGUA
-GAUA-UUCCUGUACCACC----UCAU------GAU----------UGUUUGA-------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGCAGUA-GGAU
AA-GGAAUGCGC-ACCG----AUGGA----CGUGUGCGC-CCAAGC-AGUGA-----G-A
-----A------AG------------------UC-AGA-UAGG-----------------
---CAAAU-CCGUCUGGC-----AAUUUCA----AGCUG-U-G-AUG--GG---------
------------------------------------------------------GA----
-GGGAAAUUGAGUACCGAAG-UUCC-G-GAUUUCACACUGC-C-AAGAAA-AGCCUCUAG
UU-----------------------------------------------------AGAUC
A-UAGGUGCCCGUACCGCAAACCGACACAGGUA-GGCGAGGA-GAGAAUCCUAAGGU-G-
AGCGGG-AGAACUCUC-GUUAAGGAACUCGGC-AAAAUGACCCCGUAACUUCGG-GAGAA
GGGGUG-CUCC-U-UC--------------------------------------------
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------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------AUAGGAGG--AGCCGC
AGUGAAUAGGCCCAAGCGA-----CUGUUUAGCAAAAACACAGGUCUCUGCGAAGCCG--
--AA-A-------------GGCGAAGU-AUAGGGGCUGA-CACCUGCCCGGUGCUG-G-A
AGGUUAAGGGGACGAGUUA-GCUC---UUUG---GAGCGAAGCUUUGAACCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGUGCAACGACU--UGGGCACUGUCUCAACG----AGA-GA
CCCGGUGAAAUUAUACUAUGCGUGAAGAUGCGCAUUACCCGCGACAGGACGGAAAGA-CC
CCGUGGAGC-UUUACUGUAGCCUGAUAUUGAAUGUUUGUGCAGCUUGUACAGGAU-AGGU
GGGAGCCUUUG---AAGCGUG-AGC----------------------------GCUA---
-----------------------------------GC-UUACGUGGAGGC-AC-CCGUGG
GAUA-CCACC-CUCGCUGUAUGAACAUUCUAACCCAGG--ACCG-U-GAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GU--------------------
--------------------------------------UCGGAGACA-GUGUCAGGCGGG
CAGUUUGACUGGGGCGGU-CGCCUCCCA-AAGAGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGAAUGGUUGGAAAUCAUUCGUA-GAGUG-UAAAGGCAG-AAGGGAGCUUGACU-GCGA
----------------------------------GACCUA---CAAGUCGAGCAGGGACG
AAA-GUCGGGCUUAGUGAUCCGGU-----------GGU---UCCGC-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGCUACCCCGGGG-AUAACAGGCU
UAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUC-----------------
---G-UGG--------------------------------------GCGU-UGGAAGUUU
GAGAGG-AGC-UGUCCUUAGUACGAGAGGAC-CGGGAUGGACACACCGC-UGGUG-UACC
AGUUGUUCCGCCAGGAGCAU-G-GCUGGGUAGCUACGUGUGGUAAGGAUAAGUGCUGAAA
GCA-UC--UAAGCAUGAAGCCCCCCUCAA-G-AUGAAACUUCC-CA---UCACU------
-------------UC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GAG
UGAG--UA-AGA----UCCCUCAGAGACGAUGAGGU-UGAUAGGUC-CGAGGUGGAAG-C
GU-G----------------GC----------GA-----------CACGUGCAGCUG--A
CGGAUACUAAUU--GAUCGAG-G-ACUUAUCUAA
>Photorhabdus_luminescens
G-GUUAAGCGAC--UAAGCGUACAC-GGUGGAUG-CCUAGGC-AGUCAG---AGGCGAUG
AAGGACGUGC-UAAUCUGCGAAAAGCGUCGGUGAGCUGAUAUGAAGCGA----CAGAGC-
CGG-CGAUGUCCGAAUGGGGAAACCC---AG----UGCAA------------UGCG----
----------U----U----G---CACU-A-UCAU-UAA---CUGA--------------
------AUUCA--------------------------UA-GGU-UAA-U-GA-GGCGAAC
CGGGGGAACUGAAACAUCUCAGUACCCC--GAGGAAAAGAAAUCAA-CCGAGAUUCCCCC
AGU-AG-CGGCGAGCGAACGGGGA-G-GA-GCCCA-------------------------
--------------------------------------------GAACC------U-GC-
AU----------------------CAGCG-----------AU---A-------GCAUC-A
GAGG------AAC-GG-UCUG---------------------------------------
----GAAAG-GCCGG-------CGAGAGAGGGUGACAGCCCCGUA---------CUCGAA
G--AUGG------U--AUGGC-----------UGU-----GA--GUUC----GAUGAGUA
AGGCGGGACACGAGAAAUCCUGUCUGAA-GGUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUGACUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGGCGAGGGG-A-GUGAAAGAGAACCUGAAACCGUGUACGUACAA-GCAGU-GGG
A---GCCG-U---GA---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------UCAG--GGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAU
-A-UUCUGUAGCAA-GGUUAACC----------GGAUA----------GGGGA--GCCGC
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAACU-------------------------GG-G-CGA
---------------------AAGAGUUGCAGGGUAUA-GACCCGAAACC-CGGUGAGCU
AGCCAUGGGCAGGUUGAAGGUUGGGUAACA-CUAACUGGAGGACCGA--ACCGACUA-AU
GUUGAAAAAUUAGCGGAUGACCUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG-AGAU
AGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGU-GAA-----------------
------------------------------------------------------------
-UUCA-UCUUCGGGGGUAGAGC-ACUGUUUCGG-CUA--GGGGGCC---AUCCC--GGCU
UACCAACCCGAUGCAAACUGCGAAUACCGAA-----------------------------
------------------------------------------------------------
----------------------GAAU-GGUA------UCACGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CGAAGU--CA-UGG-UU-AA---GU-GGG-------AAACGAUGUGGGAAGGCCCAGACA
GCCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUGAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AACCAUG----------CA
CCGAA-GCUGCGGCAGUGACAC--------------------------------------
------------------------------------------------------------
--------------GC--------------------------------------------
----------------------------------------------------AAGUGUUA
UU-GGGUAGGGGAGC-GUUCUGU-AAG-CCGGA-GAAGGUG--GAGCUGUGAGGC--C-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-AAGUA-ACGAUA--AAGC-GGGUG
A--A---------------AAACCC-GCU-CGCCGG-AAGACC-AAGGGUUCC-UGUCCA
ACGUUAAUCGGGGCAGGGUGAGUCGAC-CC-CUAAGGUGAGGCCG-A-G-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GCU-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACUGAA----UGUG------ACU------------------------
------------------------------------------------------------
------------------------------------GCGAAGGGGGGACGGAGAA-GGCU
AG-GCCAUCCGG-GC-G----ACGGU----UGUCCCGGU-UUAAGC-GUGUA-----G-G
-----UG-----GG------------------AG-GAG-CAGG-----------------
---UAAAU-CCGCUCUUCU-GUGAACACUG----AGGCG-U-G-AUG--AC---------
------------------------------------------------------GA----
-GCCGU-UACGGCGGUGAAG-UGGU-U-GAUGCCCGGCUUC-C-AGGAAA-AGCCUCUAA
GCCU--------------------------------------------------CAGGUC
A-UAUUGAAUCGUACCCCAAACCGACACAGGUG-GUCAGGUA-GAGAAUACUCAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AAAAUGGUGCCGUAACUUCGG-GAGAA
GGCACG-CUGG-C-GG-UAGGUGAAGGGG----------UUUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------CUCC-GGA--GCUGAAGCC--AGUCGC
AGAGACCAGCUGGCUGCAA-----CUGUUUAUUAAAAACACAGCACUGUGCAAACACG--
--UA-A-------------GUGGACGU-AUACGGUGUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAUUGAUGGGGUUA-GCC----GCAA----GGCGAGGCUCUUGACAGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGAUG--GCCAGGCUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUCCCCGCGGCAAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUGACACUGAACAUGGAGCCUUGAUGUGUAGGAU-AGGU
GGGAGGCUGAG---AAGUGCG-GAC----------------------------GCCA---
-----------------------------------GU-CUGCAUGGAGCC-AU-CCUUGA
AAUA-CCACC-CUUGAAUGUUCGAUGUUCUCACCUGGG--CCCG-U-AAAC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------CCGGGGACA-GUGUCUGGCGGG
UAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGGGUAAC-GGAGGAGCACGAAGGUUGGCU
AAUCACGGUCGGACAUCGUGAGGU-UAGUG-CAAAGGCAU-AAGCCAGCUUAACU-GCGA
----------------------------------GAGUGA---CGGUUCGAGCAGGUACG
AAA-GUAGGUCUUAGUGAUCCGGU-----------GGU---UCUGA-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGC-AGGAAGAUU
GAAAGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGCACCGC-UGGUG-UACG
GGUUGUCAUGCCAAUGGCAU-A-GCCCGGUAGCUAAGUGCGGGAGAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUUGCCUUGA-G-AUGAGUCUUCC-CC---UGAC-------
-----------------------UGA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GGU
CACG--GA-AGG----AACGUUUAAGACGAAGACGU-GGAUAGGCU-GGGUGUGUAAG-U
GC-A----------------GC----------GA-----------UGCAUUGAGCUG--A
CCAGUACUAAUG--AACCGAGAG-GCUUAACCUU
>Polaromonas_sp.
G-GUCAAGUGAA--UAAGAGCACAU-GGUGGAUG-CCUUGGC-AAUGAU---AGGCGACG
AAAGACGUGA-UAGCCUGCGAUAAGCUUCGGGGAGCUGGCAAAUUAGCU----UUGAUC-
CGG-AGAUUUCUGAAUGGGGAAACCC---AC----CC---------------UUCG----
------------------------GGGU-A-UCGC-AUA---CUGA--------------
------AUACA--------------------------UA-GGU-AUG-C-GA-GGCGAAC
CGGGUGAACUGAAACAUCUCAGUAGCUC--GAGGAAAAUACAUCAA-CCGAGAUUCCGAA
AGU-AG-UGGCGAGCGAAAUCGGA-G-AA-GCCUG-------------------------
----------------------------------------------UUA------G----
UGA---------------------UAGCA-----------AG---A-------CUCUU-A
GCAG------AAC-AG-CCUG---------------------------------------
----GAAAG-GCUGG-------CCAUAGCGGGUGAUAGCCCCGUA---------UGCAAA
A--AGAG------A--CUUGU--------GGUACU---GAGC--UAAC----GAAAAGUA
GGGCGGGACACGAGAAAUCCUGUCUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-AUCAUUGACCGAUAGU-GAAC-U-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAUCCUGAAACCGUGUGCUUACAA-AAAGU-AGG
A---GCCU-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-A-UUCAGUGGCAA-GGUUAACC----------GAAUA----------GGGUA--GCCGU
AGAGAAAU-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAAUA-------------------------GG-G-CGA
----------------------UCAGUCGCUGGGUGUA-GACCCGAAACC-AAGUGAGCU
AUCCAUGGCCAGGAUGAAGGUGCGGUAACA-CGCACUGGAGGUCCGA--ACCGACUA-GU
GUUGCAAAACUAGCGGAUGAGCUGUGGAUAGGGGUGAAAGGCUAAACAAACUUGG-AAAU
AGCUGGUUCUCUCCGAAAACUAUUUAGGUAGUGCCUCAA-GUA-----------------
------------------------------------------------------------
--UUA-CCGUCGGGGGUAGAGC-ACUGUUUUGG-CUA--GGGGGUC---AUGGC--GACU
UACCAAACCAAUGCAAACUCCGAAUACCGAC-----------------------------
------------------------------------------------------------
----------------------GAGU-A-CA------GCUUGGG-AGACAGAGC-ACCG-
G-GUGCUAACGUCCGG-ACUCAAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CUAAAA--U--UGG-CU-AA---GU-GGG-------AAACGAAGUGGGAAGGCUAUAACA
GUCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUGAUC
-----GAGUCGUCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AGCCAGU----------UA
CCGAA-GCUGCGGAUUUGCAAU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------UUAUUGCA
AG-UGGUAGGAGAGC-GUUCUGU-AAG-CCUGU-GAAGGUG--U-GGUGUAAACC--C-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-GAGUA-GCGUUA--AAGG-GGGUG
A--A---------------AAGCCC-CCU-CGCCGU-AAGCGC-AAGGUUUUC-UACGCA
ACGUUCAUCGGCGUAGAGUGAGUCGGC-CC-CUAAGGCGAGGCAG-A-G-AUGC----GU
A-----------------------------------------------------------
-------------------------------------GCU-GA-U--GGGA-AACAGGUC
-AAUA-UUCCUGUACCGAU----GUGU------AGU------------------------
------------------------------------------------------------
------------------------------------GCGAUGUGGGGACGGAGAA-GGUU
AA-CUCAGCCAA-CU-G----UUGGA----UAUGUUGGU-UCAAGC-CUGUA-----G-U
-----CG-----UG------------------CC-UGG-UAGG-----------------
---UAAAU-CCGCCGGGCU--U---AGAUG----AGGGG-U-G-AUA--AC---------
------------------------------------------------------GA----
-GUCUG-CUUGCAGACGAAG-UGAG-U-GAUACCCUGCUUC-C-AGGAAA-AGCCACUAA
GCUU---------------------------------------------------CAGCU
A-CACACGACCGUACCGCAAACCGACACUGGUG-CGCGAGAU-GAGUAUUCUAAGGC-G-
CUUGAG-AGAACUCAG-GAGAAGGAACUCGGC-AAAUUGACACCGUAACUUCGG-AAGAA
GGUGUG-CCUU-UAGU--AGGUGAACCA-----------UUUAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------UUGG-GGAGCCCAAUGA--GGCUGC
AAAAAAUCGGUGGCUGCAA-----CUGUUUAUUAAAAACACAGCACUCUGCUAAGACG--
--AA-A-------------GUCGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCUG-G-A
AGAUUAAAUGAUGGGGU----------GCAA----------GCUCUUGAUUGAAGUCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGAUG--GCCACACUGUCUCCUCC----UGA-GA
CUCAGCGAAGUUGAAAUGUUUGUGAUGAUGCAAUCUCCCCGCGGAAAGACGGAAAGA-CC
CCAUGAACC-UUUACUGUAGCUUUGUAUUGGACUUUGAACAGAUCUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGCCCG-GUC----------------------------GCUA---
-----------------------------------GA-UCGGGUGGAGCC-AA-CGUUGA
AAUA-CCACC-CUGGUGUGUUUGAGGUUCUAACCUAGG--UCCA-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GA--------------------
--------------------------------------UCGGGGACA-GUGCAUGGUAGG
CAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGUGUAAC-GGAGGAGUUCGAAGGUACGCU
AGGUACGGUCGGACAUCGUGCUAA-UAGUG-CAAUGGCAU-AAGCGUGCUUAACU-GCGA
----------------------------------GACUGA---CAAGUCGAGCAGAUGCG
AAA-GCAGGACAUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCUGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCUC
AUCCUGGGGCUGUAGCCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGAGGUACGUGA
GCUGGGUUUAAAACGUCGUGAGACAGUUUGGUCCCUAUCUUCC-----------------
---G-UGG--------------------------------------GCGC-UGCAGAUUU
GAGGAA-GCC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAACCUC-UGGUG-UACC
GGUUGUCACGCCAGUGGCAU-U-GCCGGGUAGCUAAGUUCGGAAGAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUCGUUUCAA-G-AUUAGAUCUGC-C----GGGGC------
-------------CU--------UGA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GCC
CCCU--GA-AGA----GUCGUUCAAGACCAGGACGU-UGAUAGGUC-AGGUGUGGAAG-C
GC-A----------------GU----------AA-----------UGCGUUAAGCUA--A
CUGAUACUAAUU--GCUCGUGCG-GCUUGACCCU
>Porphyromonas_gingivalis
---------------AAGGGCAGAC-GGUGGAUG-CCUAGGC-UCUCGG---AGGCGAAG
AAGGACGUGA-UAAGCUGCGAAAAGCUGCGGGAAUCGGCACAUACGAAU-----UGAUC-
CGC-AGAUAUCCGAAUGGGGCAACCC---GU----CAGGC------------CAAG----
----------G----C----C---UGAC-A-CAUG-AA----------------------
------UUGAU---------------------------------UUC-A-UG-AGCGAAC
GCGGGGAACUGAAACAUCUCAUUACCCG--UAGGAGAAGAAAACAA-AAGUGAUUCCCUC
AGU-AG-UGGCGAGCGAACGGGGA-U-UA-GCCCAAACCGGCU-UUGUUUCG--------
------------G-CAAAGUCGGGG--UAA------------UAGGACU------UCGA-
CAA-------------------AAGUUUA---------AUGA--UA-------GAUAU-A
GGAG------AAC-CU-ACUG---------------------------------------
----GAAAG-UAUGG-------CCGAAGAGCAUGAAAGCUGCGUA---------UCCGAC
A--UAUC------G--AACAA----------UAGAC-GACGG--AGCA----CCUGAGUA
GCGCGGGACACGAGACAUCCUGUGUGAA-UUGGCGGGG-CCC--AUCCCGUAAGGCUAAA
UA--CUC-CCGAGAGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CUCGAACAGAGG-A-GUGCAAUAGACCCUGAACCCGUCUGCCUACAA-GCGGU-AGG
A---GCGC-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------AUUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--UGUGACUGCGUGCCUUUUGCAUAAUGAACCUACGAGUUAC
-U-GUUUGUGGCAA-GGUUAAUUGUUAU------AAUC-----AAGACAAGGA--GCCGA
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAAA-------------------------GG-G-CGC
------------------CCAUUUAGUCACGAGCAGUA-GACGCGAAACC-AAGUGAUCU
ACCCUUGGUCAGGUUGAAGGUUAGGUAACA-CUAACUGGAGGACCGA--AUCGGUAA-GC
GUUGAAAAGCUUUCGAAUGAACUGAGGGUAGGGGUGAAAGGCUAAUCAAACUUGG-AGAU
AGCUCGUACUCCCCGAAAUGCAUUUAGGUGCAGCCUGUU-GGA-----------------
------------------------------------------------------------
--UGU-UAUCAUGAGGUAGAGCGACUGAUUGGA-UGC--GAGGGUU---UC-AC--CGCC
UAUCAAGUCCAGAUAAACUCCGAAUGCAUGA-----------------------------
------------------------------------------------------------
----------------------UAAU-U-GA------CCGAUGG-AGUGAGG-G-CAUG-
G-GUGCUAAGGUCCAU-GUCCGAGAG-GAGAAG---AAUCCGGACCACCGGCUAAGGUCC
CGAAAU--AA-UUG-CU-AA---GU-UGUA-----AAAACGAAGUCAAGAUGCAGAGACA
GCUAGGAUGUUGGCUUGGAAGCAGCCAUUCAUUUAAAGAGUGCGUAACAGCUCACUAGUC
-----GAGGAUUUUGGCAUGGAUAAUA-CAC-GGGCAU-A-AGCAAUU----------UA
CCGAA-GCCGUGGGAUAUAGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------AAUAU
AU-CGGUAGGGGAGC-AUUCCAG-C-G-ACGUAGAAGGGAA--A-AGGGCGACUU--U-U
UCUGGAGUUU-CUG-GAAAAGCAAAUGU-AGGUAU-AAGUA-ACGAUA--AAGG-GGGCG
A--G---------------AACCCC-CCU-CGCCGA-AAGACC-AAGGUUUCC-UGAUCA
ACGCUAAUCGGAUCAGGGUUAGUCGGG-GC-CUAAGGAUAAGCCG-A-A-UGGC----GA
U-----------------------------------------------------------
-------------------------------------UCC-GA-U--GGAAGAACCGGUU
-AAUA-UUCCGGUACUGAU----ACAG------AGA------------------------
------------------------------------------------------------
------------------------------------GCGAUGUGGUGACGGAGAAGUGAC
AG-UCCGGCCGU-CU-G----ACGGA----AUAGGCGGU-UAAAGG-GUGUA-----G-A
-----UG--UUGAU------------------CG-GGG-UAGG-----------------
---CAAAU-CCGCCCUGAG-----AGUCGA----ACCUG-A-C-AGUACCC---------
------------------------------------------------------GG----
AGUACAAGUACGAAGGGAUA-AGGA-C-GUAAACCGGCUCC-C-AAGAAA-ACCCGCUAA
GCAU---------------------------------------------------AUUUC
U-GUGUUACCCGUACCGUAAACCGACACAGGUG-GUUGGGUU-GAGUAUACUAAGGC-G-
CUCGAG-AGAUUCGCG-GUUAAGGAACUAGGC-AAAAUGGUCCUGUAACUUCGG-GAGAA
AGGACG-CCUG-U-CU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------CCGGACA--GGCCGC
AGAAACCAGGCCCAGGCGA-----CUGUUUAACAAAAACACAAGGCUAUGCAAAAAAG--
--CA-A-------------UUUGAGGU-AUAUAGUCUGA-CACCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGGAGUCA-UCG----U-CA----AGAGAAGCUCUGAAUUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGUGUAACGAUC--UGGGCACUGUCUCAACC----GCG-AU
CUCGGUGAAAUUGUAGUAUCGGUGAAGAUGCCGAUUACCCGCAACGGGACGAAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUUACAUUGUAUUUGGGCAUCAGAUGUGUAGGAU-AGGC
CGGAGGCAGAG---AAGCGGG-UAC----------------------------GCCA---
-----------------------------------GU-AUUCGUGGAGUC-GA-UGUUGA
AAUA-CGGCC-CUUUUGAUGUUUGGAUACUAACUC-GC-------G-GCGU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCGAGGACA-GUGUAUGGUGGG
UAGUUUGACUGGGGUGGU-CGCCUCCAA-AAGCGUAAC-GGAGGCUUCUAAAGGUACCCU
CAGGCCGAUUGGUAACCGGUCGCA-GAGUG-UAAUGGCAC-AAGGGUGCUUGACU-GGGA
----------------------------------GACAAA---CAAGUCGCACAGGUAGG
AAA-CUAGAGCAUAGUGAUCCGGU-----------GGU---UCCGC-AUG----------
----------GAAGGGCCAUCGCUCAAAGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUCACUCCCAAGAGCUCAUAUCGACGGAGUGGUUUGGCACCUCGAUGUCGGCUCGUCAC
AUCCUGGGGCUGGAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGUGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCUGUU-----------------
---G-UGG--------------------------------------GCGC-AGGAAAUUU
GCGAGG-GUC-UGACACUAGUACGAGAGGAC-CGUGUUGGACAGACCCC-UGGUU-UACC
GGUUGUACCGCCAGGUGCAC-C-GCCGGGUAUCCACGUCUGGUAAGGAUAAGUGCUGAAA
GCA-UC--UAAGCACGAAGCCGGCCUCAA-G-AUAAGAUUUCC-AU---AA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------AU-AGG----GUGGUUAAAGACUAUGACCU-UGAUAGGCU-GCAGGUGUAUG-A
UU-G----------------GU----------AA-----------CA-AUUAAGCCG--A
GCAGUACUAAUA--GCCCGAA---ACUUUUGU--
>Propionibacterium_acnes
-----AAGUUGU--GUAGUGCGAUC-GGUGGAUG-CCUUGGC-ACCAAG---AGCCGAUG
AAGGACGUUG-UGACCUGCGAUAAGCCCUGGGGAGUUGGUGAGCGAGCU----GUGAUC-
CGG-GGGUGUCCGAAUGGGGAAACCUG--GAAUGUCCGGAGU-----------AGU----
------G---U----C----C---GGUG-G-CCCU-GCC---CUGA--------------
------AUGUA--------------------------UA-GGG-UGU-G-GG-UGGUAAC
GCGGGGAAGUGAAACAUCUUAGUACCCG--UAGGAAGAGAAAACAA-GUGUGAUUCCGUG
AGU-AG-UGGCGAGCGAAAGCGGA-G-GA-GGCUAAACCGUGU-GUGUGUUCAAGCCGG-
CAGG---UGU-UG-CAUGUGCGGGG--UUG------------UGGGGGC------CUUG-
UGGUUC--UGCUGCCGCAGGAUUGGCCAGUGAGAA---AUGU---U-------GCGUGAA
GGUG------AAG-CG-UCUG---------------------------------------
----GGAAG-GCGUA-------CCGGAGUGGGUGAGAGUCCUGUA---------ACUGUA
A--GCGU------G--GCACU-----------GGUG-UGGGG--UUGC----CCCGAGUA
GCGUGGGACUCGUGGAAUUUCGCGUGAA-UCUGGCGGG-ACC--ACCCGUCAAGCCUAAA
UA--CUC-CUUGGUGACCGAUAGU-GGAU-G-AGUACCGUGAGGGAAGG-GUGAAA-AGU
AC-CCCGG-GAGGGG-A-GUGAAAGAGUUCCUGAAACCGGUCGCAUGCAA-GCCGU-CAG
A---GCC-----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UGUGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------GGUGAUGGCGUGCCUUUUGAAGAAUGAGCCUGCGAGUUAG
UG-AUGCGUGGCGA-GGUUAACCC---------GUGGU---------GGGGGA--GUCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAUAA-------------------------GG-G-CGU
-----------------------GAGUCGCGUGUUCUA-GACCCGAAGCG-GUGUGAUCU
AUCCAUGGCCAGGAUGAAGCGUCGGUAAGA-CGUCGUGGAGGUCCGA--ACCCACUU-CA
GUUGAAAAUGGAGGGGAUGAGUUGUGGAUAGGGGUGAAAGGCCAAUCAAACACCG-UGAU
AGCUGGUUCUCCCCGAAAUGCAUUUAGGUGCAGCGUUGC-GUG-----------------
------------------------------------------------------------
-GUUC-UUGUUGGAGGUAGAGC-ACUGGAUGGU-CUA--GGGGGCU---UA-UC--GGCU
UACCGAAAUCAGCCAAACUCCGAAUGCUGGC-----------------------------
------------------------------------------------------------
----------------------AAGU-G-UA------GCGUGGC-AGUGAGA-C-GGCG-
G-GGGAUAAGCUUCGU-CGUCGAGAG-GGAAAC---AGCCCAGAUCAUCAGCUAAGGCCC
CUAAGU--GG-UGA-CU-CA---GU-GGG-------AAAGGAUGUGGAGUUGCGUAGACA
ACCAGGAGGUUGGCUUGGAAGCAGCCA-UCCUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----AAGUGAUUCCGCGCCGAUAAUGUAGC-GGGGCUUA-AGUUAUC----------CG
CCGAA-GCUGUGGCAACCUGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------------GUGG
UU-GGGUAGGGGAGC-GUCGUGU-C-A-GUGGU-GAAGCUG--C-CGGGUGACUG-UG-U
GGUGGAGUUG-AUG-CGAGUGAGAAUGC-AGGCAU-GAGUA-GCGUGU---GAC-GGGUG
G--G---------------AAUCCC-GUC-CGCCGA-UUAUCC-AAGGGUUCC-AGGGUC
AAGUUUGUCUGCCCUGGGUGAGUCGGG-UC-CUAAGGCGAGGCCG-A-C-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGU-AACCAGUU
-GAUA-UUCUGGUACCGGC----UUGU------CAC----------CGUCCGUGUCGAGG
UGUGUGAUGCUAAGCAUGUGAGCUUGUCUUGGGAGUGUUUUUGAUGCUUCUGGGGUGGGU
GAGUGUGUGAACCGAUCAUGUAGUAGGCAA------GCUGCGGAGGGACGCAGUG-AGGU
AGCUCAUCCCCG-GU-G----AUGGU----UGUCCGGGG-CUAAGU-GUGUG-----G-A
-----C------UG------------------UC-UGG-UAGG-----------------
---UAAAU-CCGCUGGGCG--UGAAGGUUG----AGGCA-U-G-AUG--GG---------
------------------------------------------------------GA----
-GCCCAUGGUUGUGGGUGAG-UGAG-U-GAUCCUGUACUGU-C-GAGAAA-AGCUUCGUG
AGCGA-------------------------------------------------GGUGGC
G-GGUCCGCCCGUACCCUAAACCGACACUGGUG-GAUAGGUA-GAGUAUACCGAGGC-G-
AUCGAG-UGAAUCGUG-GUGAAGGAACUCGGC-AAAAUGCCCCCGUAACUUUGG-GAUAA
GGGGGA-CCUG-A-GC--UGUCGUGCACC----------CGUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------GGUGUGGUGGCGGUGAG--GGGCGC
AGAGUCCAGGGGGAAACGA-----CUGUUUACCAAAAACACAGGUCCGUGCGAAGUCG--
--UA-A-------------GACGAUGU-AUACGGACUGA-CUCCUGCCCGGUGCUG-G-A
AGGUUAAGGGGAACUGUGA-GU-----GUAU-----GCGUAGCGGUGAACUUAAGCCC--
CAGUAAAC-GGCGGUGGUAACUAUAACCAUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGAGUAACGAUU--UCCCUACUGUCUCCACC----AUG-AA
CUCGGUGAAAUUGCAUUACGAGUAAAGAUGCUCGUUACGCGCAGCAGGACGGAAAGA-CC
CCG-GGACC-UUUACUAUAGUUUGGUAUUGGUGAUUGGGACGGUUUGUGUAGGAU-AGGU
GGGAGACGUUG---AUGCGGC-CAC----------------------------GCUA---
-----------------------------------GU-GGUGGUGGAGUC-GU-UGGUGA
AAUA-CCACU-CUGAUUGUUCUGGUUAUCUCACUGUGG--ACCG-U-GAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GU--------------------
--------------------------------------UCAAGGACA-GUGCCUGAUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAGGGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGCCUGGUUGGUAAUCAGGUGGU-GAGUG-UAAGUGCAC-AAGGGGGCUUGACU-GUGA
----------------------------------GACUGA---CAGGUCGAGCAGGGACG
AAA-GUCGGGACUAGUGAUCUGAC-----------GGU---GGCUU-GUG----------
----------GAUGCGCCGUCACUCAACGG-AUAAAAGGUACCCCGGGG-AUAACAGGCU
GAUCUUGCCCGAGCGCUCAUAGCGACGGCAUGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGGAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGCU-----------------
---G-CGC--------------------------------------GCGG-AGGAAUCUU
GAGAAG-GGC-UGUCUUUAGUACGAGAGGAC-CGAGACGGACUGACCUC-UGGUG-UGCC
AGUUGUUCUGCCAAGAGCAU-G-GCUGGUUGGCUACGUCGGGUUGUGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCACGCUUCAA-G-AUAAGGGUUCC-CA---CAGGA------
-------------GU----------G----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UUC
CUGG--UA-AGG----UCCCCGAGAGAUGAUCGGGU-UGAUAGGCC-AGACGUGGACG-C
AU-C----------------GU----------AA-----------GGUGUGGAGCUG--A
CUGGUACUAAUA--GACCGAG-G-ACUUUCAUUA
>Pseudomonas_aeruginosa
G-GUCAAGUGAA--GAAGCGCAUAC-GGUGGAUG-CCUUGGC-AGUCAG---AGGCGAUG
AAAGACGUGG-UAGCCUGCGAAAAGCUUCGGGGAGUCGGCAAACAGACU----UUGAUC-
CGG-AGAUCUCUGAAUGGGGGAACCC---AC----CUAGG------------AUAA----
----------C----C----U---AGGU-A-UCUU-GUA---CUGA--------------
------AUCCA--------------------------UA-GGU-GCA-A-GA-GGCGAAC
CAGGGGAACUGAAACAUCUAAGUACCCU--GAGGAAAAGAAAUCAA-CCGAGAUUCCCUU
AGU-AG-UGGCGAGCGAACGGGGA-U-UA-GCCCU-------------------------
----------------------------------------------UAA------G----
CU------------------------UCA-----------UU---G-------AUUUU-A
GCGG------AAC-GC-UCUG---------------------------------------
----GAAAG-UGCGG-------CCAUAGUGGGUGAUAGCCCCGUA---------CGCGAA
A--GGAU------C--UUUGA-----------AG----------UGAA----AUCGAGUA
GGACGGAGCACGAGAAACUUUGUCUGAA-CAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUA-CUGACUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGGAGAGGGG-A-GUGAAAUAGAACCUGAAACCGUAUGCGUACAA-GCAGU-GGG
A---GCCU-A--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------CUUGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------UA--GGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAU
-A-UUCAGUGGCAA-GCUUAACCG----------UAUA----------GGGUA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAUA-------------------------GG-G-CGU
----------------------UUAGUCGCUGGGUAUA-GACCCGAAACC-GGGCGAUCU
AUCCAUGAGCAGGUUGAAGGUUAGGUAACA-CUGACUGGAGGACCGA--ACCCACUC-CC
GUUGAAAAGGUAGGGGAUGACUUGUGGAUCGGAGUGAAAGGCUAAUCAAGCUCGG-AGAU
AGCUGGUUCUCCUCGAAAGCUAUUUAGGUAGCGCCUCAU-GUA-----------------
------------------------------------------------------------
--UCA-CUCUGGGGGGUAGAGC-ACUGUUUCGG-CUA--GGGGGUC---AUCCC--GACU
UACCAAACCGAUGCAAACUCCGAAUACCCAG-----------------------------
------------------------------------------------------------
----------------------AAGUGCCGA------GCAUGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAAAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CAAAGU--UG-UGG-UU-AA---GU-GGU-------AAACGAUGUGGGAAGGCUUAGACA
GCUAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUAGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCUCA-AACCACA----------CA
CCGAA-GCUGCGGGUGUCACGC--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------AAGUGA
CG-CGGUAGAGGAGC-GUUCUGU-AAG-CCUGU-GAAGGUG--A-GUUGAGAAGC--U-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-GAGUA-ACGACA--AUGG-GUGUG
A--A---------------AAACAC-CCA-CGCCGA-AAGACC-AAGGGUUCC-UGCGCA
ACGUUAAUCGACGCAGGGUUAGUCGGU-UC-CUAAGGCGAGGCUG-A-A-AAGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACUUCU----GGUU------ACU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGAGGGACGGAGAA-GGCU
AG-GCCAGCUUG-GC-G----UUGGU----UGUCCAAGU-UUAAGG-UGGUA-----G-G
-----CU-----GA------------------AA-UCU-UAGG-----------------
---UAAAU-CCGGGGUUUC----AAGGCCG----AGAGC-U-G-AUG--AC---------
------------------------------------------------------GA---G
UCGUCUUUUAGAUGACGAAG-UGGU-U-GAUGCCAUGCUUC-C-AAGAAA-AGCUUCUAA
GCUU--------------------------------------------------CAGGUA
A-CCAGGAACCGUACCCCAAACCGACACAGGUG-GUCGGGUA-GAGAAUACCAAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AAAAUGGCACCGUAACUUCGG-GAGAA
GGUGCG-CCGG-C-UA--GGGUGAA-GGA----------UUUAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------UCCG-UAAGCUCUGGCU--GGUCGA
AGAUACCAGGCCGCUGCGA-----CUGUUUAUUAAAAACACAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUUGAUGGGGUUA-GC-----GCAA-----GCGAAGCUCUUGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUG--GCGGCGCUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAAAUCGCUGUGAAGAUGCAGUGUAUCCGCGGCUAGACGGAAAGA-CC
CCGUGAACC-UUUACUGUAGCUUUGCACUGGACUUUGAGCCUGCUUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGCGUG-GAC----------------------------GCCA---
-----------------------------------GU-UCGCGUGGAGCC-AU-CCUUGA
AAUA-CCACC-CUGGCAUGCUUGAGGUUCUAACUCUGG--UCCG-U-GAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------UCGAGGACA-GUGUAUGGUGGG
CAGUUUGACUGGGGCGGU-CUCCUCCUA-AAGAGUAAC-GGAGGAGUACGAAGGUGCGCU
CAGACCGGUCGGAAAUCGGUCGUA-GAGUA-UAAAGGCAA-AAGCGCGCUUGACU-GCGA
----------------------------------GACAGA---CACGUCGAGCAGGUACG
AAA-GUAGGUCUUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGCCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------ACGU-UUGAGAUUU
GAGAGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAACCUC-UGGUG-UUCC
GGUUGUCACGCCAGUGGCAU-U-GCCGGGUAGCUAUGUUCGGAAAAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUUGCCUCAA-G-AUGAGAUCUCA-CU---GGGAA------
-------------CU--------UGA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UUC
CCCU--GA-AGG----GCCGUCGAAGACUACGACGU-UGAUAGGCU-GGGUGUGUAAG-C
GU-U----------------GU----------GA-----------GGCGUUGAGCUA--A
CCAGUACUAAUU--GCCCGUGAG-GCUUGACCAU
>Ralstonia_eutropha
G-GUCAAGCGAA--CAAGUGCAUGU-GGUGGAUG-CCUUGGC-GAUCAC---AGGCGAUG
AAGGACGCGG-UAGCCUGCGAAAAGCUUCGGGGAGCUGGCAAACGAGCU----UUGAUC-
CGG-AGAUGUCCGAAUGGGGAAACCC---GG----CCC--------------GAAU----
--------------------G---GGUC-A-UCCC-UGA---CUGA--------------
------AUACA--------------------------UA-GGU-CAG-G-GA-AGCGAAC
GCGGCGAACUGAAACAUCUAAGUAGCUG--CAGGAACAGAAAUCAA-CCGAGAUUCCCAA
AGU-AG-UGGCGAACGAAAUGGGA-A-GA-GCCUU-------------------------
----------------------------------------------GUA------C-UC-
UU----------------------UAGCA-----------GU---G-------UUGUU-A
GCAG------AAC-GG-GAUG---------------------------------------
----GAAAG-CCCGG-------CCGUAGCAGGUGAUAGCCCUGUA---------UGCGAA
A--ACAG------C--GUUGU--------GGAACU---AGGU--GUAC----GACAAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-GAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-GUGAUCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAUCCUGAAACCGCAUGCAUACAA-ACAGU-CGG
A---GCCU-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUGACGGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-A-UUCAGUGGCGA-GCUUAACCG----------AUUA----------GGGCA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAACA-------------------------GG-G-CGA
----------------------UUAGUCGCUGGGUGUA-GACCCGAAACC-AGAUGAUCU
AUCCAUGGCCAGGUUGAAGGUGCGGUAACA-CGUACUGGAGGACCGA--ACCCACUA-AC
GUUGAAAAGUUAGGGGAUGAGCUGUGGAUAGGGGUGAAAGGCUAAACAAAUCUGG-AAAU
AGCUGGUUCUCUCCGAAAACUAUUUAGGUAGUGCCUCGU-GUG-----------------
------------------------------------------------------------
--UCA-CCUUCGGGGGUAGAGC-ACUGUCAUGG-UUG--GGGGGUC-U-AU-UG-CUGAU
UACCCCGCCAUAGCAAACUCCGAAUACCGAA-----------------------------
------------------------------------------------------------
----------------------GAGU-GCAA------UCACGGG-AGACAGA-C-AUCG-
G-GUGCUAACGUCCGG-UGUCAAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CCAAAU---A-UGG-CU-AA---GU-GGG-------AAACGAAGUGGGAAGGCUAAAACA
GUCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUGAUC
-----GAGUCGUCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AGCCAUA----------UA
CCGAA-GCUGCGGACGCACAGC--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------AAUGUG
CG-UGGUAGGAGAGC-GUUCCGU-AAG-CCUGU-GAAGGUG--U-CUUGUAAAGG--A-U
GCUGGAGGUA-UCG-GAAGUGCGAAUGC-UGACAU-GAGUA-GCGAUA--AAGG-GGGUG
A--A---------------AGGCCC-CCU-CGCCGU-AAGCCC-AAGGUUUCC-UACGCA
ACGUUCAUCGGCGUAGGGUGAGUCGGC-CC-CUAAGGCGAGGCAG-A-G-AUGC----GU
A-----------------------------------------------------------
-------------------------------------GCU-GA-U--GGGA-AGCAGGUU
-AAUA-UUCCUGCACCGUC----GUAU------GAU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGGAUCG-CGGA
AG-GUUGUCCGG-GU-G----UUGGA----AGUCCCGGU-CCCUGC-AG-UG-----G-A
-----GA-----AG------------------GC-GCU-UAGG-----------------
---CAAAU-CCGGGCGCGU----AAUUCAA----GGCUG-U-G-GG---GC---------
------------------------------------------------------GA----
-GUGAGC--UAGGCUCGCGA-AGCA-A-UUGGAAGUGGUUC-C-AAGAAA-AGCCUCUAA
GCUU---------------------------------------------------CAGUC
A-UACGAGACCGUACCGCAAACCGACACAGGUG-GGCGAGAU-GAGUAUUCUAAGGC-G-
CUUGAG-AGAACUCGG-GAGAAGGAACUCGGC-AAAUUGGUACCGUAACUUCGG-GAUAA
GGUACG-CCCU-G-GU-AGCUUGACUGGC-----------CUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------GCCA-GAAGGGUGAAGG--GGUUGC
AAUAAAAUGGUGGCUGCGA-----CUGUUUAAUAAAAACACAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGAUUAAAUGAUGGGGU----------GCAA----------GCUCUUGAUUGAAGUCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUG--GCCACACUGUCUCCUCC----CGA-GA
CUCAGCGAAGUUGAAGUGUUUGUGAUGAUGCAAUCUCCCCGCGGCUAGACGGAAAGA-CC
CCAUGAACC-UUUACUGUAGCUUUGCAUUGGACUUUGAACCGAUCUGUGUAGGAU-AGGU
GGGAGGCUUUG---AAGCGUG-GAC----------------------------GCUA---
-----------------------------------GU-UCACGUGGAGCC-GU-CCUUGA
AAUA-CCACC-CUGGUUUGUUUGAGGUUCUAACCUUGG--CCCG-UGAAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------UCGGGGACA-GUGCAUGGUAGG
CAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGUGUAAC-GGAGGAGUUCGAAGGUACGCU
UGGUACGGUCGGACAUCGUACCUA-AAGUG-CAAUGGCAA-AAGCGUGCUUAACU-GCGA
----------------------------------GACCGA---CAAGUCGAGCAGGUGCG
AAA-GCAGGACAUAGUGAUCCGGU-----------GGU---UCUGA-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCUGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCUC
AUCCUGGGGCUGUAGCCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGAGGUACGUGA
GCUGGGUUUAAAACGUCGUGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UGGAAUCUU
GACGGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGUACCGC-UGGUG-UACC
UGUUGUCUCGCCAGAGGCAU-C-GCAGGGUAGCUAUGUACGGAAGAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUCGCCUGAA-G-AUGAGGAUUCC-CU---GGAGG------
-------------CU--------UGA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------CCU
CCUU--GA-AGG----GUCGUUCGAGACCAGGACGU-UGAUAGGCU-GGGUGUGGAAG-C
GC-A----------------GU----------AA-----------UGCGUUAAGCUA--A
CCAGUACUAAUU--GCCCGUAAG-GCUUGAUCCU
>Rhodobacter_sphaeroides
---UCAAGCGCG-AAAAGGGCGUUU-GGUGGAUG-CCUAGGC-AGCAAG---AGGCGAUG
AAGGACGUGA-UACCCUGCGUUAAGCCAUGGGGAGCCGGGAAUAGGCUU-----UGAUC-
CAU-GGAUGUCCGAAUGGGGAAACCC---AC----CUGAU-UGUUCGUU---GUUC---A
AUGGGCA---AA---G---AC---AGGU-A-UCAU-UAC---CCUGA-------------
------AUACA--------------------------UAG-GG-GUU-U-UGAAGCGAAC
CCGGGGAACUGAAACAUCUAAGUACCCG--GAGGAAAGGAAAUCAA-CAGAGACUCCGUU
AGU-AG-UGGCGAGCGAACGCGGA-C-CA-GCCGA-------------------------
----------------------------------------------UCC------U----
CG---------------------------------------A---A-------GAGUG-A
CUGG------AAU-GC-GCUG---------------------------------------
----GAAAG-CGCAG-------CGAUACAGGGUGACAGCCCCGUA---------CAGGAA
G--CUCC------A--CAGG------------------------ACAU----AUCAAGUA
GGGCGGGACACGUGAAAUCCUGUCUGAA-GAUCGGGGG-ACC--ACCCCCGAAGGCUAAG
UA--CUC-CUUGCUGACCGAUAGC-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGACGAGGGG-A-GUGAAACAGUACCUGAAACCGGACGCCUACAA-GCAGU-CGG
A---GGCC-C---AU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------GUUCU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------UCCC--GCUGACGGCGUACCUUUUGUAUAAUGGGUCAACGACUUGG
-U-CUCACGAGCAA-GCUUAAGCC----------GGUA---------GGUGGA--GGCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAAA-------------------------GG-G-CGU
----------------------CGAGUUCGUGGGAUCA-GACCCGAAACC-AGGUGAUCU
AGCCAUGAGCAGGAUGAAGUCAGGGUAACA-CCUGAUGGAGGUCCGA--ACCAACAC-CC
GUUGAAAAGGGUCUGGAUGACUUGUGGCUAGGGGUGAAAGGCCAAUCAAACCUGG-AGAU
AGCUGGUUCUCCGCGAAAGCUAUUUAGGUAGCGCCUCGG-ACG-----------------
------------------------------------------------------------
-AAUA-CCUCGGGGGGUAGAGC-ACUGCAUGGA-UGA--UGGGGGC---CCACA--GCCU
UACUGAGUCUAAGCAAACUCCGAAUACCCGA-----------------------------
------------------------------------------------------------
----------------------GAGU-A-CU------AUCCGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAGAG-GGAAAC---AACCCUGACCUGCAGCUAAGGCCC
CCAAUU--CG-UGG-CU-AA---GU-GGG-------AAAGCAUGUGGGACGGCCAAAACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAUAGCGUAACAGCUCACUGGUC
UAGAUAAGCUGUCCUGCGGCGAAGAUGUAAC-GGGGCUCA-AGCCACG----------AG
CCGAA-GCUCAGGAUGCACAGC--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------AAUGUG
CG-UGGUAGCGGAGC-GUUCCGU-GAU-UCUGU-GAAGCCG--G-GCCGUAAGGCAUC-C
GGUGGAGAGA-UCG-GAAGCGAGAAUGU-UGACAU-GAGUA-GCGACA--AACA-GGGUG
A--G---------------AGACCC-UGU-CGCCGA-AAGUCC-AAGGGUUCC-UGCUUA
AAGCUAAUCUGAGCAGGGUGAGCCGGC-CC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-ACCAGGUU
-AAUA-UUCCUGGGCCAGG----AG-----------------------------------
------------------------------------------------------------
-----------------------------------------GAUGUGACGGAUCG-CAGG
-U-GUAGUUCGG-CC-U----UAUCG----GAUUGGCCG-GG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CUGC-U----GAG-CGGUCC-C-UGGAAAUAGCCCUC--
------------------------------------------------------------
--CAUCAGACCGUACCCUAAACCGACACAGGUG-GACUGGUA-GAGAAUACCAAGGC-G-
CUUGAG-AGAACCACA-UCAAAGGAACUCGGC-AAAAUGCCUCCGUAAGUUCGC-GAGAA
GGAGGC-CCCG-U-CU--UUGGG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------CAACCAGAGGCG--GGGGGC
ACAAACCAGGGGGUGGCGA-----CUGUUUACUUAAAACACAGGGCUCUGCGAAGCCG--
--CA-A-------------GGCGACGU-AUAGGGUCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAAAGGAGAGGU----------GCAA----------GCCUUGAAUUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGAUC--UCCCCGCUGUCUCUGAU----GUG-GA
CUCAGCGAAAUUGAACUGUGUGUCAAGAUGCACACUUCCCGCGGUUAGACGGAAAGA-CC
CCAUGAACC-UUUACUAUAGCUUCGCACUGGCAUCAGGAAUGUGAUGUGCAGGAU-AGGU
GGUAGGCAUCG---AAACGGG-GAC----------------------------GCCA---
-----------------------------------GU-UCCCGUGGAGCC-AA-CCUUGA
GAUA-CCACC-CUUCGCAUUCUUGAUGUCUAACCGCGG--UCCA-U-UACC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GA--------------------
--------------------------------------UCCGGGACC-CUGCGUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCCA-AACAGUAAC-GGAGGCGCGCGAUGGUGGGCU
CAGACCGGUCGGAAAUCGGUCGUC-GAGUG-CAAUGGCAG-AAGCCCGCCUGACU-GCAA
----------------------------------GACUGA---CAAGUCGAGCAGAGACG
AAA-GUCGGCCAUAGUGAUCCGGU-----------GGU---CCCGA-GUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCUGGGG-AUAACAGGCU
GAUGAUGCCCAAGAGUCCAUAUCGACGGCAUCGUUUGGCACCUCGAUGUCGGCUCAUCUC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGAGGUACGUGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GUGU-AGGAGACUU
GAGAAG-AGU-UGCCCCUAGUACGAGAGGAC-CGGGGUGAACGAACCAC-UGGUG-GACC
AGUUGUCGUGCCAACGGCAG-U-GCUGGGUAGCUAUGUUCGGACAGGAUAACCGCUGAAG
GCA-UC--UAAGCGGGAAGCCCCCUUCAA-A-ACAAGGUCUCC-CU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGG----GCCGUGGAAGACCACCACGU-CGAUAGGCC-AGAGGUGUAAG-C
GC-A----------------GC----------AA-----------UGCGUUCAGCUG--A
CUGGUACUAAUU--GCCCGAUUG-GCUUGAUCUG
>Rhodopirellula_baltica
G-GCCAAUCUAU--UAAGGGCACAU-GGGGGAUG-UCUUGGC-GUUAGA---AGG---AG
AAGGGCGUGG-AAGUCUGCGAAAAGCCUGGGGAAGUUGACACACAAGCG----AUGAUC-
CCG-GGGUUCCCGA---------------CC-----------------------------
--------------------------AC-A-GCAC-ACU---GA----------------
------AUACA--------------------------UAG-GU-GUG-U-UUGUAACAAC
CUGGUGAACUGAAACAUCUAAGUAACCA--GAGGAACAGAAAGAAA-AAUCGAUUCCGUC
AGU-AG-CGGCGAGCGAAAUCGGA-A-UA-GCCCAAACCGAGG-AGGU------------
-----------UU-CCUUCUCGGGG--UUG------------UAGGACU------UCAA-
UA----------------------UGGGA---------UUGAG-AC-------GUGUU-A
GUGA------AAC-GA-CUUG---------------------------------------
----GAACG-GUCGG-------CCACAGAGGGUGACAGCCCCGUA---------CGCGAA
A--AUAU------U--GUCUC----------ACCU---UAGA--AGCA----CCUGAGUA
GGUCCAGUCACGUGAAACCUGGACUGAA-UCCGCGGGG-ACC--AUCCCGUAAGGCUAAA
UA--CUC-UCUAACGACCGAUAGC-GAAC-C-AGUAGCGUGAGUGAAUG-GUGAGA-AGA
AC-CCCUGCUAGGGG-A-G-GAAUGUGAACCUGAAACCAUGUGCCUACAA-GCGGU-CGG
A---GCAC-U---A----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UUUUA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------AUG--UGUGACGGCGUGCCUUUUGCAUAAUGAUCCGGCGAGUUGU
-G-GUAAUCGGCUU-GGUUAAGUUC--------UGACG--------GAACGAA--GCCCA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------AAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
-----------------------UGGUCGAUUGCUGCA-GACGCGAAACCUGUGUGAUCU
ACCCAUGGGCAGGUUGAAGCGCGGGUUAAA-CUGCGUGGAGGACCGA--ACCCACUU-AG
GUUGAAAACUGAGGGGAUGACCUGUGGGGAGGACUGAAAGUGUAAUCAAACCAGG-AGAU
AGCUCGUUCUCUCCGAAAUAUCUUGAGGGAUAGCGUCGA-GUAA----------------
------------------------------------------------------------
-AUUAGUGACCGGGGGUAGAGAUACUGAAUCGG-AUG--GGGGCCC---UUCCA--AGGG
UACCCCACCGAACCAAACUCCGAAUACCGGU-----------------------------
------------------------------------------------------------
----------------------UCACCU-UA------CCUCGGC-AGUCAGU-C-CCUG-
G-GGGAUAAGCUCCAG-GGUCGAGAG-GGAAAC---AACCCAGAUCGCCUGCUAAGGUCC
CGAAGU--AC-UA--CU-UA---GU-CAC-------UAAGGAAGUUGAAGUGCCGUGACA
GCUGGGAUGUUGGCUUAGAAGCAGCCA-CCAUUUAAAAAGUGCGUAACAGCUUACCAGUC
-----GAGCAUUUCUGCGCCGAUAAUG-AAC-GGGAGU-A-AGUAGUA----------CA
CCGAA-GCAGCGGAUUCUAGAU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------UUAUCUAG
AG-UGGUAGGAGAGC-GCCGAUG-A-U-CAGAUACGAGCCG--U-ACGGUAACGA--G-C
GGUGUCGGGG-UCAUCGGGUGAUUAUGC-CGGAAU-GAGUA-ACGAUA--AAAC-AGGUG
A--G---------------AAUCCU-GUU-CGCCGA-AAGCCU-AAGGUUUCC-UGGGGA
AGGUAAAUCCGCCCAGGGUUAGCCGGU-AC-CUUAGUCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GAC-GA-U--GGAU-AGAAGGUC
-AAUA-UUCCUUCGCCACA----UGGG-----UACU------------------------
------------------------------------------------------------
------------------------------------UCGAUGCGGGGACGGCGUC-CAGA
AA-GUGAGCGGU-ACGA----AUAGA----AAUGUCCGU-AGCGAA-AACUGA----G-G
-----U--------------------------GU-UGG-GGGA-----------------
---UAAAUGACCUGACAU-----AAGCCAA----GGUUG-A-G-CUC--GA---------
------------------------------------------------------------
-GAGCAU-CCAAGUUCUCGA-AGUC-A-UUGGAAGGACGUC-C-AAGAAA-AGCCGCUAA
GUU----------------------------------------------------AUGUG
C-CCUGUGACCGUACUA-AAACUGACACAGGUA-GGCGAGAU-GAGAAUUCUAAGGC-G-
CUCGGG-AGAACGGUG-GUUAAGGAACUCUGC-AAAAUGGCCCCGUAAGUUCGC-GAUAA
GGGGCG-CCUC-C-GA--CGGUU-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------CACGCUGUUGGA--GGCCAC
AGAAAAUCGGCUCUAACGA-----CUGUUUAUCAAAAACACAGGUCUCUGCUAACACG--
--CA-A-------------GUGGAUGU-AUAGAGACUGA-CGCCUGCCCGGUGUUG-G-U
AGGUUAAGGAAGACGGUUA-GCUC---UUCG---GAGCGAAGCUGGCGACCGAAGCCC--
CAAUAAAC-GGCGGCCCUAACUAUGAGGGUCCUAAGGUAGCGAAGUUCCUUGUCGGG-UA
AGUUCCGACCUGCAUGAAAGGCGUAACGAUU--GGAGCACUGUCUCAACC----ACC-GA
CCCGGUGAAAUUGUAGUUGUGGUGAAGAUGCCACAUACCCGCGGUUAGACGGAAAGA-CC
CCGUGAACC-UUUACUGUAGGCUGCUAUUGGGUUGAGAUAUGUCUUGUGUAGGAU-AGCU
GGGAGACUUUG---AACUUUG-CAC----------------------------GCUA---
-----------------------------------GU-GUAGAGGGAGUC-GU-UGUUGA
AAUA-CCAGC-CUGGUCAUAUUUUAAUUCUAACUU-UGAUCCCC-UGAAAC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------GG----GG--------------------
--------------------------------------CAAAGGACA-GUGUCAGUCGGG
CAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGAGUAAC-GGAGGAGUGCAAAGGUACACU
CAGCCUGGUCGGCAAUCAGGCGUA-GAGCG-UAAAGGUAG-AAGUGUGCUUGACU-GCGA
----------------------------------GACUCA---UAAGUCGAGCAGGAACG
AAA-GUUGGCCUUAGUGAUCCGGU-----------AAU---CCCGA-AUG----------
----------GAAGGGUUAUCGCUCAUCAG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
UAUCGCAUCCGAGCGUCCACAGCGGCGAUGCGGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGGUGUAGAAGCUCCCAAGGGUUUGGCUGUUCGCCAAUGAAAGUGGUACGUGA
GCUGGGUUCAGACCGUCGUGAGACAGGUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UCGAAUCUU
GAUGGG-AUU-CAACUUUAGUACGAGAGGAU-UUAGUUGGACGAAGCUC-UGGUG-UACC
AGUUGUCGCGCUAGCGGCAC-G-GCUGGAUAGCUAACUUCGGAAAGGAUAAACGCUGAAA
GCA-UC--UAAGCGUGAAGCCCGCCCAGA-G-AUAAGGAUUCG-UA---GACAU------
-------------UA---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
GUCG--AA-AGC----CCCCUGGAAGACUACCAGGU-UGAUAGGUU-GGACGUGUAAG-U
GC-A----------------GU----------AA-----------UGCAUUAAGCAA--A
CCAAUACUAACG--GGCGAAA---GUUUGGCCA-
>Shewanella_oneidensis
G-GUUAAGCGAC--UAAGCGUAUAC-GGUGGAUG-CCUUGGC-AGUCAG---AGGCGAUG
AAGGACGUAG-UAACUUGCGAAAAGCGUUGGCGAGCUAGUAACAAGCAU----UUGAGC-
UAA-CGAUGUCCGAAUGGGGGAACCC---GG----CCGC-------------AUAA----
---------------G----C---GGUC-A-UCAU-AAC---GUGA--------------
------AUACA--------------------------UAG-CG-UUA-U-GA-GGCAAAC
GAGGGGAACUGAAACAUCUAAGUACCCU--UAGGAAAAGAAAUCAA-CCGAGAUUCCCCU
AGU-AG-CGGCGAGCGAACGGGGA-U-UA-GCCCU-------------------------
----------------------------------------------UAA------G----
UC------------------------AGA-----------GG---G-------GUGUU-A
GUGG------AAU-GG-UCUG---------------------------------------
----GAAAG-UCCAG-------CGGCACAGGGUGAUAGCCCCGUA---------CACGAA
A--ACUA------A--CCUUU-----------GA----------UGAA----AACGAGUA
AGGCGGGACACGUGAUAUCCUGUUUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUGACUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCUGUGAGGGG-A-GUGAAAUAGAACCUGAAACCGUAUACGUACAA-GCAGU-GGG
A---GCGG-U---A----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------CUUGA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------GAC--CGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-G-UUUUGUAGCGA-GGUUAAGC----------GAAUA----------GCGGA--GCCGU
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUGU--------------
----------------------UAACU-------------------------GC-G-CGU
----------------------UUAGUUGCAAGGCGUA-GACCCGAAACC-CGGUGAUCU
AGCCAUGGGCAGGUUGAAGGUUGAGUAACA-UCAACUGGAGGACCGA--ACCGACUA-AU
GUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG-AGAU
AUCUGGUUCUCCUCGAAAGCUAUUUAGGUAGCGCCUCGA-GCG-----------------
------------------------------------------------------------
-AAUA-CCAUUGGGGGUAGAGC-ACUGUUAAGG-CUA--GGGGGUC---AUCCC--GACU
UACCAACCCUUUGCAAACUCCGAAUACCAAU-----------------------------
------------------------------------------------------------
----------------------GAGU-A-CU------ACUCGGG-AGACAGA-C-GGCG-
G-GUGCUAACGUCCGU-CGUCAAAAG-GGAAAC---AACCCAGACCGUCAGCUAAGGUCC
CAAAGU--GU-AUG-UU-AA---GU-GGG-------AAACGAUGUGGGAAGGCUUAGACA
GCUAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUAGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AACAUAC----------CA
CCGAA-GCUACGGGUGCAAUCC--------------------------------------
------------------------------------------------------------
--------------AU--------------------------------------------
----------------------------------------------------UAGGGUUG
CG-CGGUAGAGGAGC-GUUCUGU-AAG-CCGUA-GAAGGUG--AAGGGGUAACCC--A-C
ACUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-GAGUA-ACGAUA--AAGG-GGGUG
A--A---------------AAACCC-CCU-CGCCGA-AAGACC-AAGGGUUCC-UGUCCA
ACGUUAAUCGGGGCAGGGUGAGUCGAC-CC-CUAAGGUGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------AUC-GA-U--GGGA-AACAGAUU
-AAUA-UUUCUGUACUUUU----GCUA------ACU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGAGAGACGGAGAA-GGCU
AG-GCUAGCGCG-GC-G----UUGGU----AGUCCGCGU-UUAAGG-UGGUA-----G-G
-----UG-----GG------------------UG-ACU-UAGG-----------------
---CAAAU-CCGGGUCACU--AU-ACACUG----AGAGC-U-G-AUG--AC---------
------------------------------------------------------GA----
-GUCCC-CAAGGGGAUGAAG-UAGU-U-GAUGCCAUGCUUC-C-AGGAAA-AUCUUCUAA
GCUU--------------------------------------------------CAGGUU
A-GUAGGAAUCGUACCCCAAACCGACACAGGUG-GUCGGGUA-GAGAAUACCAAGGC-G-
CUUGAG-AGAACUCGG-CUGAAGGAACUAGGC-AAAAUGGUACCGUAACUUCGG-GAGAA
GGUACG-CUCC-U-GU--UGGUGAUGAGA----------CUUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------UCUC-UAAGCUGACGGG--AGUCGC
AGAUACCAGGUGGCUGCAA-----CUGUUUAUCAAAAACACAGCACUGUGCAAACUCG--
--CA-A-------------GAGGAAGU-AUACGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUUGAUUGGGUUA-UC-----GCAA-----GAGAAGCUCAUGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGAUG--GCCACGCUGUCUCCAGC----CGA-GA
CUCAGUGAAGUUGAAAUUGCGGUGAAGAUGCCGUAUACCCGCGGCUAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUGGCACUGAACAUUGACCCUACAUGUGUAGGAU-AGGU
GGGAGACUUUG---AAGUUGG-AAC----------------------------GCUA---
-----------------------------------GU-UCUGAUGGAGUC-GU-CCUUGA
AAUA-CCACC-CUUGUAGUGUUGAUGUUCUAACUUGGC--CCCA-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GG--------------------
--------------------------------------GUAAGGACA-GUGCCUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGAGUAAC-GGAGGAGCACGAAGGUUGGCU
AAGUACGGUCGGACAUCGUACGGU-UAGUG-CAAUGGCAU-AAGCCAGCUUAACU-GCGA
----------------------------------GACAGA---CACGUCGAGCAGGUACG
AAA-GUAGGUCAUAGUGAUCCGGU-----------GGU---UCUGA-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGUCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UGGAUGAUU
GAGGGG-AGU-UGCUCCUAGUACGAGAGGAC-CGGAGUGAACGAACCGC-UGGUG-UUCG
GGUUGUCAUGCCAAUGGCAU-U-GCCCGGUAGCUAUGUUCGGAAUCGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCGAGCCCCAA-G-AUGAGUCAUCC-CU---UGGAC------
-------------UU--------UAA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GUC
CACU--AA-AGA----GCCGUUCGAGACUAGGACGU-UGAUAGGUC-AGGUGUGUAAG-C
GU-U----------------GU----------GA-----------GGCGUUGAGCUA--A
CUGAUACUAAUG--ACUCGAGAG-GCUUAACCAU
>Sinorhizobium_meliloti
G-AUCAAGUGAA-AGAAGGGCAUUU-GGUGGAUG-CCUUGGC-AUGCAC---AGGCGAUG
AAGGACGUGA-UACGCUGCGAAAAGCCGUGGGGAGCUGCGAAUGAGCUU-----UGAUC-
CAU-GGAUCUCCGAAUGGGGCAACCC---AC----CUUAG-AUGCUUGGAA--AAU-UUC
CAAGCAU---U----GUUGAA---AGGU-A-UCUU-AUU---CUGA--------------
------AUACA--------------------------UAG-GG-AUA-A-GA-AGCGAAC
GCAGGGAACUGAAACAUCUAAGUACCUG--CAGGAAAGGACAUCAA-CCGAGACUCCGCA
AGU-AG-UGGCGAGCGAACGCGGA-C-CA-GGCCA-------------------------
----------------------------------------------GUG------G----
CA------------------------AUG-----------AG---G-------AAUAA-A
GUGG------AAC-GA-UCUG---------------------------------------
----GAAAG-UUCGG-------CCGUAGCGGGUGAUAGCCCCGUA---------CACGUA
G--AACA------C--UCAU------------------------UGUC----CUUGAGUA
AGGCGGGACACGUGAAAUCCUGUCUGAA-CAUGGGGAG-ACC--ACUCUCCAAGCCUAAG
UA--CUC-GUGCAUGACCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGACAAGGGG-A-GUGAAAUAGAACCUGAAACCGGAUGCCUACAA-ACAGU-CGG
A---GCCC----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------G--GGUGACGGCGUACCUUUUGUAUAAUGGGUCAACGACUUAG
-U-GUGGCAUGCAA-GCUUAAGCC----------GGUA---------GGUGGA--GGCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAACA-------------------------GG-G-CGC
---------------------UUUAGUAUGUCGCAUUA-GACCCGAAACC-GAGUGAUCU
AGCCAUGAGCAGGUUGAAGGUUGGGUAACA-CCAACUGGAGGACCGA--ACCCGCAU-CU
GUUGCAAUAGAUUGGGAUGACUUGUGGCUAGGGGUGAAAGGCCAAUCAAACUCGG-AAAU
AGCUGGUUCUCCGCGAAAACUAUUUAGGUAGUGCGUCGA-CCG-----------------
------------------------------------------------------------
-AAUA-CCCUCGGGGGUAGAGC-ACUGGAUGGG-CUA--UGGGGAC---UCACC--GUCU
UACUGAUCCUAACCAAACUCCGAAUACCGAG-----------------------------
------------------------------------------------------------
----------------------GAGU-A-CU------AGUCGGC-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAAAG-GGCAAC---AACCCUGACCUCCAGCUAAGGUCC
CCAAGU--CA-UGG-CU-AA---GU-GGG-------AAAGGAUGUGAGGAUCCCAAAACA
ACCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAACAGCUCACUGGUC
UAAAUAAGGGUCUUUGCGCCGAAAAUGUAAC-GGGGCUGA-AGCCAUG----------CA
CCGAA-GCUGAGGAUACGUCGU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------AAGACG
UG-UGGUAGCGGAGC-GUUCCGU-AAG-CCAGU-GAAGGGA--UACCCGUGAGGG--G-U
CCUGGAGGUA-UCG-GAAGUGCGAAUGU-UGACAU-GAGUA-ACGAUA--AAGA-GGGUG
A--G---------------AGACCC-UCU-CGCCGA-AAGACC-AAGGGUUCC-UGCUUA
AAGUUAAUCUGAGCAGGGUUAGCCGGC-CC-CUAAGACGAGGCGG-A-C-ACGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-ACCACGUU
-AAUA-UUCGUGGGCCUGG----UG-----------------------------------
------------------------------------------------------------
-----------------------------------------GUAGUGACGGAUUG-CUCA
-A-CUUGUCCGG-AC-U----UAUUG----GAUUGUCCG-GG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CGGG-G----ACG-CGGUUC-C-AGGAAAUAGCUCCACC
------------------------------------------------------------
--GUAUAGACCGUACCCGAAACCGACACAGGUG-GUCAGGUA-GAGUAUACCAAGGC-G-
CUUGAG-AGAACUAUG-UUGAAGGAACUCGGC-AAAUUGCACGCGUAACUUCGG-AAGAA
GCGUGA-CCCU-U-UU--CUACG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------CAAGUAGGAUGG--GGUGGC
ACAGACCAGGGGGUAGCGA-----CUGUUUAUCAAAAACACAGGGCUCUGCGAAGUCG--
--CA-A-------------GACGACGU-AUAGGGUCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGGGGU----------GCAA----------GCUCUGAAUCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCGCUGUCUCCAAC----AUA-GA
CUCAGUGAAAUUGAAUUCCCCGUGAAGAUGCGGGGUUCCUGCGGUCAGACGGAAAGA-CC
CCGUGCACC-UUUACUAUAGCUUUACACUGGCAUUCGUGUCGGCAUGUGUAGGAU-AGGU
GGUAGGCUUUG---AAGCGGG-GAC----------------------------GCCA---
-----------------------------------GU-UCUCGUGGAGCC-AU-CCUUGA
AAUA-CCACC-CUUAUCGUCAUGGAUGUCUAACCGCGG--UCCG-U-CAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------UCCGGGACA-GUGUAUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCGA-AAGAGUAAC-GGAGGCGCGCGAUGGUGGGCU
CAGAGCGGUCGGAAAUCGCUCGUC-GAGUG-CAAUGGCAU-AAGCCCGCCUGACU-GCGA
----------------------------------GACUGA---CAAGUCGAGCAGAGACG
AAA-GUCGGUCAUAGUGAUCCGGU-----------GGU---CCCGC-GUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUGACCCCCAAGAGUCCAUAUCGACGGGGUUGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUUUGGCUGUUCGCCAAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GUGU-AGGAAUAUU
GACAGG-AUC-UGUCCCUAGUACGAGAGGAC-CGGGAUGGACAUAUCUC-UGGUG-GACC
UGUUGUCCUGCCAAGGGCAU-A-GCAGGGUAGCUAUAUAUGGAAGGGAUAACCGCUGAAG
GCA-UC--UAAGCGGGAAACCCACCUGAA-A-ACGAGUAUUCC-CU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGA----ACCGUGGAAGACGACCACGU-UGAUAGGCC-GGGUGUGGAAG-U
GC-G----------------GC----------AA-----------CGCAUGAAGCUU--A
CCGGUACUAAUC--GUUCGAUUG-GCUUGAUCGU
>Staphylococcus_aureus
G-AUUAAGUUAU--UAAGGGCGCAC-GGUGGAUG-CCUUGGC-ACUAGA---AGCCGAUG
AAGGACGUUA-CUAACGACGAUAUGCUUUGGGGAGCUGUAAGUAAGCUU-----UGAUC-
CAG-AGAUUUCCGAAUGGGGAAACCC---AG----CAUGAGU-----------UAU----
------G---U----C----A---UGUU-A-UCGA-UAU---GUGA--------------
------AUACA--------------------------UAG-CA-UAU-CAGAAGGCACAC
CCGGAGAACUGAAACAUCUUAGUACCCG--GAGGAAGAGAAAGAAA-AUUCGAUUCCCUU
AGU-AGCCGGCGAGCGAAACGGGA-A-GA-GCCCAAACCAAC---AAGCUUG--------
--------------CUU-GUUGGGG--UUG------------UAGGACA------CUCUA
UA----------------------CGGAGUUACAAA--GGAC---G-------ACAUU-A
GACG------AAU-CA-UCUG---------------------------------------
----GAAAG-AUGAA-------UCAAAGAAGGUAAUAAUCCUGUA---------GUCGAA
A--AUGU------U--GUCUC----------UCUU---GAGU--GGAU----CCUGAGUA
CGACGGAGCACGUGAAAUUCCGUCGGAA-UCUGGGAGG-ACC--AUCUCCUAAGGCUAAA
UA--CUC-UCUAGUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGG-AAGGGG-A-GUGAAAUAGAACCUGAAACCGUGUGCUUACAA-GUAGU-CAG
A---GCCC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------UG--GGUGAUGGCGUGCCUUUUGUAGAAUGAACCGGCGAGUUAC
-G-AUUUGAUGCAA-GGUUAAGCA---------GUAAA---------UGUGGA--GCCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
----------------------UUAGUAUUUGGUCGUA-GACCCGAAACC-AGGUGAUCU
ACCCUUGGUCAGGUUGAAGUUCAGGUAACA-CUGAAUGGAGGACCGA--ACCGACUU-AC
GUUGAAAAGUGAGCGGAUGAACUGAGGGUAGCGGAGAAAUUCCAAUCGAACCUGG-AGAU
AGCUGGUUCUCUCCGAAAUAGCUUUAGGGCUAGCCUCAA-GUG-----------------
------------------------------------------------------------
-AUGA-UUAUUGGAGGUAGAGC-ACUGUUUGGA-CGA--GGGGCCC---CUCUC--GGGU
UACCGAAUUCAGACAAACUCCGAAUGCCAAU-----------------------------
------------------------------------------------------------
----------------------UAAU-U-UA------ACUUGGG-AGUCAGA-A-CAUG-
G-GUGAUAAGGUCCGU-GUUCGAAAG-GGAAAC---AGCCCAGACCACCAGCUAAGGUCC
CAAAAU--AU-AUG-UU-AA---GU-GGA-------AAAGGAUGUGGCGUUGCCCAGACA
ACUAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAGUGCGUAAUAGCUCACUAGUC
-----GAGUGACACUGCGCCGAAAAUGUACC-GGGGCU-A-AACAUAU----------UA
CCGAA-GCUGUGGAUUGUCCUU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------UGGAC
AA-UGGUAGGAGAGC-GUUCUAA-G-G-GCGUU-GAAGCAU--G-AUCGUAAGGA--C-A
UGUGGAGCGC-UUA-GAAGUGAGAAUGC-CGGUGU-GAGUA-GCGAAA---GAC-GGGUG
A--G---------------AAUCCC-GUC-CACCGA-UUGACU-AAGGUUUCC-AGAGGA
AGGCUCGUCCGCUCUGGGUUAGUCGGG-UC-CUAAGCUGAGGCCG-A-C-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GGC-GA-U--GGAU-AACAGGUU
-GAUA-UUCCUGUACCACC----UAUA------AUC----------GUUUUAA-------
------------------------------------------------------------
-----------------------------------UCGAUGGGGGGGACGCAGUA-GGAU
AG-GCGAAGCGU-GC-G----AUUGG----AUUGCACGU-CUAAGC-AGUAA-----G-G
-----C------UG------------------AG-UAU-UAGG-----------------
---CAAAU-CCGGUACUCA--UUAAGGCUG----AGCUG-U-G-AUG--GG---------
------------------------------------------------------GA----
GAAGACAUUGUGUCUUCGAG-UCGU-U-GAUUUCACACUGC-C-GAGAAA-AGCCUCUAG
AU-----------------------------------------------------AGAAA
A-UAGGUGCCCGUACCGCAAACCGACACAGGUA-GUCAAGAU-GAGAAUUCUAAGGU-G-
AGCGAG-CGAACUCUC-GUUAAGGAACUCGGC-AAAAUGACCCCGUAACUUCGG-GAGAA
GGGGUG-CUCU-U-UA--GGGUUAAC----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GCCCAGAAG--AGCCGC
AGUGAAUAGGCCCAAGCGA-----CUGUUUAUCAAAAACACAGGUCUCUGCUAAACCG--
--UA-A-------------GGUGAUGU-AUAGGGGCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGUGGUUA-GC-----UUCU-----GCGAAGCUACGAAUCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGCGUAACGAUU--UGGGCACUGUCUCAACG----AGA-GA
CUCGGUGAAAUCAUAGUACCUGUGAAGAUGCAGGUUACCCGCGACAGGACGGAAAGA-CC
CCGUGGAGC-UUUACUGUAGCCUGAUAUUGAAAUUCGGCACAGCUUGUACAGGAU-AGGU
AGGAGCCUUUG---AAACGUG-AGC----------------------------GCUA---
-----------------------------------GC-UUACGUGGAGGC-GC-UGGUGG
GAUA-CUACC-CUAGCUGUGUUGGCUUUCUAACCCGCA--CCAC-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------GU----GG--------------------
--------------------------------------UGGGAGACA-GUGUCAGGCGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGCGCUCAAAGGUUCCCU
CAGAAUGGUUGGAAAUCAUUCAUA-GAGUG-UAAAGGCAU-AAGGGAGCUUGACU-GCGA
----------------------------------GACCUA---CAAGUCGAGCAGGGUCG
AAA-GACGGACUUAGUGAUCCGGU-----------GGU---UCCGC-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGCUACCCCGGGG-AUAACAGGCU
UAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUC-----------------
---G-UGG--------------------------------------GCGU-AGGAAAUUU
GAGAGG-AGC-UGUCCUUAGUACGAGAGGAC-CGGGAUGGACAUACCUC-UGGUG-UACC
AGUUGUCGUGCCAACGGCAU-A-GCUGGGUAGCUAUGUGUGGACGGGAUAAGUGCUGAAA
GCA-UU--UAAGCAUGAAGCCCCCCUCAA-G-AUGAGAUUUCC-CA---ACUUC------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------------G
GUUA--UA-AGA----UCCCUCAUAGAUGAUGAGGU-UAAUAGGUU-CGAGGUGGAAG-C
AU-G----------------GU----------GA-----------CAUGUGGAGCUG--A
CGAAUACUAAUC--GAUCGAA-G-ACUUAAUCAA
>Streptococcus_pneumoniae
G-GUUAAGUUAA--UAAGGGCGCAC-GGUGGAUG-CCUUGGC-ACUAGG---AGCCGACG
AAGGACGUGA-CAAACGACGAUAUGCCUUGGGUAGCUGUAAGUAAGCGA-----UGAUC-
CAG-GGAUUUCCGAAUGGGGGAACCC---AA----CAGGU-------------AAU----
----------A----C----C---UGUU-A-CCCA-CAU---CU----------------
------GUUAA----------------------------G-GA-UGU-GAGGAGGAAGAC
GCAGUGAACUGAAACAUCUAAGUAGCUG--CAGGAAGAGAAAGCAA-AAGCGAUUGCCUU
AGU-AG-CGGCGAGCGAAACGGCA-G-GA-GGGCAAACCGAA---GAGUUUA--------
--------------CUC-UUCGGGG--UUG------------UAGGACU------GCAA-
UG----------------------UGGACUCA--------AA---G-------AUUAU-A
GAAG------AAU-GA-UUUG---------------------------------------
----GGAAG-AUCAG-------CCAAAGAGAGUAAUAGCCUCGUA---------UUUAAA
A--UAGU------C--UUUGU----------ACUU---AGCA--GUAU----CCUGAGUA
CGGCGGGACACGUGAAAUCCCGUCGGAA-UCUGGGAGG-ACC--AUCUCCCAACCCUAAA
UA--CUC-CCUAGUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGG-GAGGGG-A-GUGAAAUAGAACCUGAAACCGUGUGCCUACAA-CAAGU-UCG
A---GCCC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------UG--GGUGAGAGCGUGCCUUUUGUAGAAUGAACCGGCGAGUUAC
-G-UUAUGAUGCGA-GGUUAAGUU---------GAAGA---------GACGGA--GCCGU
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CAC
---------------------CUUAGUAUCAUGACGUA-GACCCGAAACC-AUGUGACCU
ACCCAUGAGCAGGUUGAAGGUGCGGUAAGA-CGCACUGGAGGACCGA--ACCAGGGC-AC
GUUGAAAAGUGCUUGGAUGACUUGUGGGUAGCGGAGAAAUUCCAAACGAACUUGG-AGAU
AGCUGGUUCUCUCCGAAAUAGCUUUAGGGCUAGCGUCGACAUUA----------------
------------------------------------------------------------
-GAGA-UUCUUGGAGGUAGAGC-ACUGUUUGGG-UGA--GGGGUCC---AUCCC--GGAU
UACCAAUCUCAGAUAAACUCCGAAUGCCAAU-----------------------------
------------------------------------------------------------
----------------------GAAU-U-AU------GGUCGGC-AGUCAGA-C-UGCG-
A-GUGCUAAGAUCCGU-AGUCGAAAG-GGAAAC---AGCCCAGACCACCAGCUAAGGUCC
CAAAAU--AA-UUG-UU-AA---GU-GGA-------AAAGGAUGUGGGGUUGCACAGACA
ACUAGGAUGUUAGCUUAGAAGCAGCUAUUCAUUCAAAGAGUGCGUAAUAGCUCACUAGUC
-----GAGUGACCCUGCGCCGAAAAUGUACC-GGGGCUAA-AACAAUU----------UA
CCGAA-GCUGUGGAUACCUUU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------AUAGG
UA-UGGUAGGAGAGC-GUUCUAU-G-U-GUGAU-GAAGGUA--U-ACCGUGAGGA--G-U
GCUGGAACGC-AUA-GAAGUGAGAAUGC-CGGUAU-GAGUA-GCGAAA---GAC-AGGUG
A--G---------------AAUCCU-GUC-CACCGU-AAGACU-AAGGUUUCC-AGGGGA
AGGCUCGUCCGCCCUGGGUUAGUCGGG-AC-CUAAGGAGAGACCG-A-A-AGGU----GU
A-----------------------------------------------------------
-------------------------------------UCC-GA-U--GGAC-AACAGGUU
-GAUA-UUCCUGUACUAGA----GUAU------GUA------------------------
------------------------------------------------------------
------------------------------------GUGAUGGAGGGACGCAGUA-GGCU
AA-CUAAAGCAG-ACGA----UUGGA----AGAGUCUGU-CUAAGC-AGUGA-----G-G
-----U------GU------------------GA-AUU-GAGU-----------------
---CAAAU-GCUUAAUUCU--AUAACAUUG----AGCUG-U-G-AUG--GG---------
------------------------------------------------------GA----
-GCGAAGUUUAGUAGCGAAG-UUAG-U-GACGUCACACUGC-C-AAGAAA-AGCUUCUAG
CGUU--------------------------------------------------UAACCA
U-ACUCUACCCGUACCGCAAACCGACACAGGUA-GUCGAGGC-GAGUAGCCUCAGGU-G-
AGCGAG-AGAACUCUC-GUUAAGGAACUCGGC-AAAAUGACCCCGUAACUUCGG-GAGAA
GGGGUG-CUGA-C-UU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------UAAGUC--AGCCGC
AGUGAAUAGGCCCAAGCAA-----CUGUUUAUCAAAAACACAGCUCUCUGCUAAAUCG--
--UA-A-------------GAUGAUGU-AUAGGGGGUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGUGCUUA-GC-----GUAA-----GCGAAGGUAUGAAUUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGCGUAAUGAUU--UGGGCACUGUCUCAACG----AGA-GA
CUCGGUGAAAUUUUAGUACCUGUGAAGAUGCAGGUUACCCGCGACAGGACGGAAAGA-CC
CCAUGGAGC-UUUACUGCAGUUUGAUAUUGAGUGUCUGUACCACAUGUACAGGAU-AGGU
AGGAGUCUAAG---AGAUCGG-GAC----------------------------GCCA---
-----------------------------------GU-UUCGAAGGAGAC-GC-UGUUGG
GAUA-CUACC-CUUGUGUUAUGGCCACUCUAACCCAGA--UAGG-U-GAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CC----UA--------------------
--------------------------------------UCGGAGACA-GUGUCUGACGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGAAUGGUUGGAAAUCAUUCGCA-GAGUG-UAAAGGUAU-AAGGGAGCUUGACU-GCGA
----------------------------------GAGCUA---CAACUCGAGCAGGGACG
AAA-GUCGGGCUUAGUGAUCCGGU-----------GGU---UCCGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGCUACCCUGGGG-AUAACAGGCU
UAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUC-----------------
---G-CGG--------------------------------------GCGU-AGGAAAUUU
GAGAGG-AUC-UGCUCCUAGUACGAGAGGAC-CAGAGUGGACUUACCGC-UGGUG-UACC
AGUUGUCUUGCCAAAGGCAU-C-GCUGGGUAGCUAUGUAGGGAAGGGAUAAACGCUGAAA
GCA-UC--UAAGUGUGAAACCCACCUCAA-G-AUGAGAUUUCC-CA---UGAUU------
-------------AU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AUA
UCAG--UA-AGA----GCCCUGAGAGAUGAUCAGGU-AGAUAGGUU-AGAAGUGGAAG-U
GU-G----------------GC----------GA-----------CACAUGUAGCGG--A
CUAAUACUAAUA--GCUCGAG-G-ACUUAUCCAA
>Streptomyces_coelicolor
G-GCCAAGUUUU--UAAGGGCGCAC-GGUGGAUG-CCUUGGC-ACCAGG---AACCGAUG
AAGGACGUGG-GAGGCCACGAUAGGCCCCGGGGAGUCGUCAACCAGGCU----UUGAUC-
CGG-GGGUGUCCGAAUGGGGAAACCC---GG----CAGUCGU-----------CAU----
------G---G----G----C---UGUC-A-CCCG-CUG---CUGA--------------
------ACACA--------------------------UAG-GC-AGU-GUGG-AGGGAAC
GCGGGGAAGUGAAACAUCUCAGUACCCG--CAGGAAGAGAAAACAA-CCGUGAUUCCGGG
AGU-AG-UGGCGAGCGAAACCGGA-U-GA-GGCCAAACCGUAU-ACGUGUGAGACCCGG-
CAGG---GGU-UG-CGUGUGCGGGG--UUG------------UGGGAUC------UCUC-
UUUUACG-GUCUGCCGGCCGUGAGACGAGUCAGAAA--CCGU---U-------GAUGU-A
GGCG------AAG-GA-CAUGC--------------------------------------
----GAAAG-GUCCG-------GCGUAGAGGGUAAGACCCCCGUA---------GUCGAA
A--CGUC------A--ACGGC----------UCGUU-UGAGA--GACA----CCCAAGUA
GCACGGGGCCCGAGAAAUCCCGUGUGAA-UCUGGCGGG-ACC--ACCCGCUAAGCCUAAA
UA--UUC-CCUGGUGACCGAUAGC-GGAU---AGUACCGUGAGGGAAUG-GUGAAA-AGU
AC-CGCGG-GAGCGG-A-GUGAAAUAGUACCUGAAACCGUGUGCCUACAA-GCCGU-GGG
A---GCGUCG---GG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AU-GGAG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CUUG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------CUCCA-----
--------------UCCU--CGUGACUGCGUGCCUUUUGAAGAAUGAGCCUGCGAGUUUG
CG-GUGUGUUGCGA-GGUUAACCC----------GAGU---------GGGGAA--GCCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAAUA-------------------------GG-G-CGU
--------------------UUUUAGUAGCACGCUCAA-GACCCGAAGCG-GAGUGAUCU
AGCCAUGGGCAGGUUGAAGCGGCUGUAAGA-GGUCGUGGAGGACCGA--ACCCACCA-GG
GUUGAAAACCUGGGGGAUGACCUGUGGUUAGGGGUGAAAGGCCAAUCAAACUCCG-UGAU
AGCUGGUUCUCCCCGAAAUGCAUUUAGGUGCAGCGUCGU-GUG-----------------
------------------------------------------------------------
-UUUC-UUGCCGGAGGUAGAGC-ACUGGAUAGG-CGA--UGGGCCC---UA-CC--GGGU
UACUGACCUUAGCCAAACUCCGAAUGCCGGU-----------------------------
------------------------------------------------------------
----------------------AAGUGA-GA------GCGCGGC-AGUGAGA-C-UGUG-
G-GGGAUAAGCUCCAU-GGUCGAGAG-GGAAAC---AGCCCAGAGCAUCGACUAAGGCCC
CUAAGC--GU-ACG-CU-AA---GU-GGG-------AAAGGAUGUGGAGUCGCACAGACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----UAGUGAUUCCGCGCCGACAAUGUAGC-GGGGCUCA-AGCGUAC----------CG
CCGAA-GUCGUGUCAUUGCAGCA-------------------------------------
---------------------------------------------A--------------
----------UACGGCCA------------------------------------------
------------------------------------------------ACGCCGGCUGUG
AU-GGGUAGGGGAGC-GUCGUGU-G-C-CGGGU-GAAGCAG--C-CGCGGAAGCG-AG-U
UGUGGACGGU-UCA-CGAGUGAGAAUGC-AGGCAU-GAGUA-GCGAUA---CAA-ACGUG
A--G---------------AAACGU-UUG-CGCCGA-UUGACU-AAGGGUUCC-UGGGUC
AAGCUGAUCUGCCCAGGGUAAGUCGGG-AC-CUAAGGCGAGGCCG-A-C-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAU-AACCGGUU
-GAUA-UUCCGGUACCCGC----UGUG------AAG----------CGUCAAACAUCGAG
CAUCGUGAUGCUAAGGCCGUGAAGCCGCCCUGAUCUCUUCGGAGUUGAGGGGAGUGGUGG
AGCCGCCGAACCAAGCGGUUAGUAGGUGA-------GUGAUGGGGUGACGCAGGA-AGGU
AGUCCAUCCCGG-GC-G----GUGGU----UGUCCCGGG-GUAAGG-GUGUA-----G-G
-----C------CG------------------GU-GUG-UAGG-----------------
---UAAAU-CCGCACACCU--U-GUGGCUG----AGACC-U-G-AUG--CC---------
------------------------------------------------------GA----
-GCCGAU---UGUGGUGAAG-UGGA-U-GAUCCUAUGCUGU-C-GAGAAA-AGCCUCUAG
CGA----------------------------------------------------GUUUC
A-UGGCGGCCCGUACCCUAAACCGACUCAGGUG-GUCAGGUA-GAGAAUACCGAGGC-G-
UUCGGG-UGAACUAUG-GUUAAGGAACUCGGC-AAAAUGCCCCCGUAACUUCGG-GAGAA
GGGGGG-CCAC-A-CC--UGGUGACGAGU----------UUUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------ACUC-UGAGCUGGGGGU--GGCCGC
AGAGACCAGCGAGAAGCGA-----CUGUUUACUAAAAACACAGGUCCGUGCGAAGCCG--
--UA-A-------------GGCGAUGU-AUACGGACUGA-CGCCUGCCCGGUGCUG-G-A
ACGUUAAGGGGACCGGUUA-GUCACAUUUCGGUGUGGCGAAGCUGAGAACUUAAGCGC--
CAGUAAAC-GGCGGUGGUAACUAUAACCAUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCUCGACUGUCUCAACC----AUA-GG
CCCGGUGAAAUUGCACUACGAGUAAAGAUGCUCGUUUCGCGCAGCAGGACGGAAAGA-CC
CCG-GGACC-UUUACUACAGUUUGAUAUUGGUGUUCGGUUCGGCUUGUGUAGGAU-AGCU
GGGAGACUUUG---AAGCUCG-CAC----------------------------GCCA---
-----------------------------------GU-GUGGGUGGAGUC-GU-CGUUGA
AAUA-CCAGU-CUGGUCGUGCUGGAUGUCUAACCUGGG--UCCG-U-GAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------UCAGGGACA-GUGUCUGAUGGG
UAGUUUAACUGGGGCGGU-UGCCUCCUA-AAGAGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGCCUGGUUGGCAAUCAGGUGUU-GAGUG-UAAGUGCAC-AAGGGAGCUUGACU-GUGA
----------------------------------GACCGA---CGGGUCGAGCAGGGACG
AAA-GUCGGGACUAGUGAUCCGGC-----------GGU---GGCUU-GUG----------
----------GAAGCGCCGUCGCUCAACGG-AUAAAAGGUACCCCGGGG-AUAACAGGCU
GAUCUUCCCCAAGAGUCCAUAUCGACGGGAUGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGGAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGCU-----------------
---G-UGC--------------------------------------GCGU-AGGAGUCUU
GAGAAG-GGC-UGUCCCUAGUACGAGAGGAC-CGGGACGGACGAACCUC-UGGUG-UGCC
AGUUGUCCUGCCAAGGGCAU-G-GCUGGUUGGCUACGUUCGGGAGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCUGCUUCGA-G-AUGAGGACUCC-CA---CCCCC------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GAG
GGGU--UA-AGG----CUCCCAGUAGACGACUGGGU-UGAUAGGCC-GGAUCUGGAAG-C
AC-C----------------GU----------GA-----------GGUGUGGAGGUG--A
CCGGUACUAAUA--GGCCGAG-G-GCUUGUCCUC
>Symbiobacterium_thermophilum
A-AUCAAGCUGG--AAAGGGCACAC-GGCGGAUG-CCUGGGC-GCCAGG---CGCCGAUG
AAGGACGUGG-CAAGCUGCGAUAAGCCUCGGGGAGCCGCAAGCAGGCGU-----AGAUC-
CGG-GGAUCUCCGAAUGGGGCAACCC---GG----CUGGCGU-----------AAU----
------G---G----C----C---AGUC-A-CCCA-CAG---CUGA--------------
------AUCCA--------------------------UAG-GC-UGU-GAGG-AGGGCAC
CGCCCGAACUGAAACAUCUCAGUAGGGC--GAGGAAAAGAAAUCAA-CCGAGAUUCCCUC
AGU-AG-CGGCGAGCGAACGGGGA-G-GA-GCCUAAACCAGUU-CCGGCUGA--------
-----------GC-CGGGGCUGGGG--UUG------------CGGGACG------CCGA-
UG----------------------AAGCGAU-------GCUC-CUG-------AGCCU-A
GCUG------AACAGG-UCUG---------------------------------------
----GAAAG-GCCGG-------CCACAGAAGGUAAUAGCCCUGUA---------GGCGAA
A--GGCG------A--AGGAC----------CGCU---UGGC--GGAU----CCCAAGUA
CCACGGGACACGAGGAAUCCCGUGGGAA-UCCGGGGGG-ACC--ACCCUCCAAGGCUAAA
UA--CGC-CU-GGCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CGCGG-GAGCGG-A-GUGAAAGAGACCCUGAAACCGUGUGCCUACAA-GCAGU-ACG
A---GCCC-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------AUAUA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------AG--GGUGAGUGCGUGCCUAUUGAAGAAUGAACCGGCGAGUUAC
-G-GUCACUGGCAU-GGUUAAGGGC--------CUCAG--------GCCCGGA--GCCGA
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAGA-------------------------GG-G-CGU
------------------------AGUCAGUGGCUGUA-GACCCGAAACC-CGGUGAUCU
AUCCAUGGCCAGGGUGAAGCGGGGGUAAGA-CCUCGUGGAGGCCCGA--ACCGGUCA-GU
GUUGAAAAACUGUCGGAUGAGCUGUGGAUAGGGGUGAAAAGCCAAACGAACCGGG-AGAU
AGCUGGUUCUCCCCGAAAUAGCUUUAGGGCUAGCGUCGGCAGAG----------------
------------------------------------------------------------
-AAGC-UUGCUGGAGGUAGAGC-ACUGAUUGGG-CUA--GGGGCC----CUAUC---GGU
UACCGAACCCAGUCAAACUCCGAAUGCCAGC-----------------------------
------------------------------------------------------------
----------------------AAGU-A--U------GGCCGGC-AGUCAGA-C-GGCG-
A-GCGCUAAGGUCCGU-CGUCAAGAG-GGAAAC---AGCCCAGACCGCCAGCUAAGGUCC
CCAAGU--CU-CUG-CU-AA---GU-GGU-------CAAGGAUGUGGCGUUGUAGAGACA
ACCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUGAAAGAGUGCGUAACAGCUCACUGGUC
-----GAAUGACGCUGCGCCAUAAAUAC-UC-GGGGCU-A-AGCAGAG----------CA
CCGAA-GCUGCGGACUGCCG----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------UAGGGC
AG-UGGUAGGGGAGC-GUUCCAU-G-U-GCGGC-GAAGGUC--G-ACCGGAAGGA--C-G
GCUGGAGCGC-AUG-GAAGUGAGAAUGC-CGGUAU-GAGUA-GCGAAA--AGAC-AGGUG
A--G---------------AAUCCU-GUC-CACCGA-AAGCCU-AAGGAUUCC-UGAGCA
AGGCUCGUCCGCUCAGGGUCAGUCGGG-AC-CUAAGCCGAGGCCG-A-A-UGGC----GU
A-----------------------------------------------------------
-------------------------------------GGC-GA-U--GGGA-AACAGGUC
-GACA-UUCCUGUACCACC----UACG------GGU----------CGCUUGA-------
------------------------------------------------------------
------------------------------------CCGAUGCGGGGACGCAGGA-GGCU
AG-GGGGACCCG-GCCG----CUGGU----UGAGCCGGG-GUAAGC-GGGUA-----GCG
-----U------GG------------------CC-CGG-UAGG-----------------
---GAAGU-CCGCCGGGCU----AAACGUG----AGACG-C-G-AUG--CC---------
------------------------------------------------------GA----
-CCGAAAUGAAGUAGGGAAG-CCCC-U-GACGCCACACUGC-C-GAGAAA-AGCCGCUAG
GG-----------------------------------------------------AGACC
C-GGGGUGCCCGUACCGCAAACCGACACAGGUA-GGCGGGGA-GAGAAUCCUCAGGU-G-
CGCGGG-AGAACCCUC-GCUAAGGAACUCGGC-AAAAUGCAUCCGUAACUUCGG-GAGAA
GGAUGG-CCCU-C-GA-ACCGUGAGCGGA----------GAGAC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------GCCGCAGAGCGGGGGAG--GGUUGC
AGAGGAGAGGCCCAAGCGA-----CUGUUUACCACAAACACAGGUCAGUGCUAAGCCG--
--GA-A-------------GGCGACGU-AUACUGGCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGGGGAAGGGUCA-GGCU---GCAA---GGCCGAAGCUCUGAACCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAUGGCGUAACGACU--UGGGCACUGUCUCGGCG----AGG-GA
CCCGGUGAAAUUGCAAUACCUGUGAAGAUGCAGGUUACCUGCGAUUGGACAGAAAGA-CC
CCAUGGAGC-UUUACUGUAGCCUGGCAUUGGAUUUUGGUGGUGCGUGUACAGGAU-AGGU
GGGAGCCUGCG---AAGCCGG-GUC----------------------------GCCA---
-----------------------------------GA-UUCGGUGGAGGC-GC-CGUUGG
GAUA-CCACC-CUCGCAGCAUCGAAGUUCUAACACAGG--CCCC-UGGAGC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------GG----GG--------------------
--------------------------------------CCGUGGACC-GUGCCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCCA-AAAGGUAAC-GGAGGCGCCCAAAGGUCCGCU
CAGGAUGGUUGGAAAUCAUCCGUG-GAGUG-CAAAGGCAG-AAGCGGGCUUGACU-GCGA
----------------------------------GACAGA---CAGGUCGAGCAGGGUCG
AAA-GACGGGCUUAGUGAUCCGGC-----------GGU---UCCGG-GUG----------
----------GAAGGGCCGUCGCUCAACGG-AUAAAAGCUACCCUGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUCGGGCUGAAGUCGGUCCGAAGGGUUCGGCUGUUCGCCGAUUAAAGCGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCAUC-----------------
---G-CAG--------------------------------------GCGG-AGGAGAUUU
GACGGG-AUC-UGCCCCUAGUACGAGAGGAC-CGGGGUGGACGGCCCGC-UGGUG-UACC
AGUUAUCCCGCCAGGGGUAC-A-GCUGGGUAGCCAUGGCCGGAACGGAUAAGCGCUGAAA
GCA-UC--UAAGCGCGAAGCCGGCCCGAA-G-AUGAGAUCUCC-CA---UCCCG------
-------------C----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
GGAG--UA-AGG----CCCCUGGAAGAUGACCAGGU-AGAUAGGCC-GGGAGUGGAAG-U
GC-C----------------GU----------AA-----------GGCAUGGAGCGG--A
CCGGUACUAAUC--GGCCGAG-G-GCUUGAUUUC
>Synechococcus_sp.
---UCAAGCUAC--AAAGGGCUCAC-GGUGGAUA-CCUAGGC-ACACAG---AGGCGAAG
AAGGACGUGG-UUACCGACGAUACGCUUUGGGGAGCCGGAAGCAGGCAU-----UGAUC-
CAG-AGAUUUCCGAAUGGGGCAACCC---UA-----------------------------
--------------------------GAAA-CAAC-UUA---CUGA--------------
------AUCUA--------------------------UAG-GU-AAG-UAUG-AGCGAAC
GCAGUGAACUGAAACAUCUAAGUAGCUG--UAGGAAGAGAAAGAAA-ACUCGAUUCCCUU
AGU-AG-CGGCGAGCGAAGCGGGA-A-GA-GCCCAAACCACC---GGUUUUU--------
--------------ACU-GGUGGGG--UUG------------UGGGAGC------GCGA-
UA----------------------UGGAA---------UCUA---G-------CGAGU-A
GACG------AAU-CA-CUU----------------------------------------
----AAGAG-GUGAA-------CCGUAGAGGGUGAGAGUCCCGUA---------GUUGAA
A--CUUU------A--AGGAU-----------ACU---AGCG--UUAU----CCCGAGUA
GGCCGGAACACGAGAAAUUCCGGUUGAA-UCCACGAGG-ACC--ACCUCGUAAGGCUAAA
UA--CUC-CUGUGUGACCGAUAGU-GAA--G-AGUACCGCGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAACAUGAAACCGUGAGCUUACAA-GCAAU-UAG
A---GCAC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------AUUAAA-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------CG--UGUGAUAGUGUGCCUGUUGAAGAAUGAGCCGGCGACUUAU
-A-GGGUCUGGCA--GGUUAAGGAG--------AAUAU--------AUCCGAA--GCCAA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAUA-------------------------GG-G-CGA
----------------------GUCGUCAGAUUUUAUA-GACCCGAACCC-AGGUGAUCU
AACCAUGUCCAGGAUGAAGCUUAGGUAACA-CUAAGUGGAGGUCCGA--ACCGACUU-CU
GUUGAAAAAGGAGCGGAUGAGGUGUGGUUAGGGGUGAAAUGCCAAUCGAACCUGG-AGCU
AGCUGGUUCUCCUCGAAAUGUGUUUAGGCGCAGCGGUCA-UGA-----------------
------------------------------------------------------------
-UUAU-AGUCGGGGGGUAAAGC-ACUGAUUCGG-UGC--GGGCUGC---GA-GA--GCGG
UACCAAAUCGAGUCAAACUCAGAAUACCCGA-----------------------------
------------------------------------------------------------
----------------------U-GA-A-CA------CAUGGCC-AGUAAGA-C-GGUG-
G-GGGAUAAGCUUCAU-CGUCAAGAG-GGAAAC---AGCCCAGACCACCAGCUAAGGUCC
CCAAGU--CA-AUA-CU-AA---GU-GGC-------AAAGGAGGUGGGAAUGCAGAGACA
ACCAGGAGGUUUGCCUAGAAGCAGCCA-UCCUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----AAGCGUUCCUGCGCCGAAAAUG-AAU-GGGACU-A-AGUAUUG----------CA
CCGAA-GCUGUGGGCUUGUAUU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------UAUACA
AG-CGGUAGAGGAGC-GUUCUGU-GGU-AGUGC-GAAGCAU--UAGC-GAGAGCA--G-G
UGUGGACGAA-GCA-GAAGUGAGAAUGU-CGGCUU-GAGUA-GCGAAA--ACUA-GGGUG
A--G---------------AAUCCC-UAG-CCCCGA-AAUCCU-AAGGAUUCC-UCCGGA
AGGCUCGUCCGCGGAGGGUUAGUCGGG-AC-CUAAGGCGAGGCCG-A-C-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGUU-AACAGGUU
-AAUA-UUCCUGUACCGAU----UGUG------AAU------------------------
------------------------------------------------------------
------------------------------------UGUGCAGAGGGACGGAGAA-GGCU
AA-GUGUGCCGC-AA-G----UUGGU----UAGCGGUUU---AAGU-AUUCGA----G-G
-----UG--A--UG-----------------AGG-AAC---GG-----------------
---CGAAA-ACGU--UCUG------AGCUG----AGGUG-C-G-AAU--AG---------
------------------------------------------------------GA----
--GUUACUACGGUAACGAAG-ACAC-U-GAUGUCCAGCUUC-C-AAGAAA-AGCUCUAAC
CACGU-------------------------------------------------UAAUUC
A-UAAUUGCCCGUACCCUAAACCGACACAGGUA-GGAAGGUU-GAGUAUACCCAGGG-G-
CGCGAG-AUAACUCUC-UCUAAGGAACUCGGC-AAAAUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCAG-C-GA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGCU--GGCCGC
AGUGAAGAGAUCCAGGCGA-----CUGUUUACCAAAAACACAGGUUUCCGCUAAGUCG--
--AA-A-------------GACGAUGU-AUGGGAGCUGA-CGCCUGCCCAGUGCCG-G-A
AGGUUAAGGAAGUAGGUCA-GUCU---AUUC---GUAGGAAGCUCACGACUGAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGCGUAACGAUC--UGGAUGCUGUCUCGGAG----AGA-GA
CUCGGCGAAAUAGGAGUGUCUGUGAAGAUACGGACUACCUGCACCCGGACAGAAAGA-CC
CUAUGAAGC-UUUACUAUAGCCUGGUAUUGGGUUCGGGCCCUGAUUGCGCAGGAU-AGGU
GGGAGACUAUG---AUCUACU-CCU----------------------------UGUG---
-----------------------------------GG-GAGUAGUGAGUC-AC-UGGUGA
GAUA-CCACU-CUAUCAGGGCUAGGAUUCUAACUUUGA--GCCA-U-CAAC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GC--------------------
--------------------------------------CAAGAGACA-GUAUCAGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGCGCGCAAAGGUUCCCU
CAGGCUGGUUGGAAAUCAGCCGCA-GAGUG-UAAAGGCAG-AAGGGAGCUUGACU-GCGA
----------------------------------GAGCUA---CAACUCGAGCAGGUACG
AAA-GUAGGCCUUAGUGAUCCGAC-----------GGU---UCCGC-GUG----------
----------GAAGGGCCGUCGCUCAACGG-AUAAAAGUUACUCUAGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AACCUGGGGCGGUAGUACGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGU-----------------
---G-CAG--------------------------------------GCGU-AAGAACAUU
GAGAGG-AGC-CUUCCUUAGUACGAGAGGAC-CGGGAAGGACGCACCGC-UGGUG-UACC
AGUUAUCGUGCCAACGGUAA-ACGCUGGGUAGCCAAGUGCGGAGUGGAUAACCGCUGAAA
GCA-UC--UAAGUGGGAAGCCCACCUCAA-G-AUGAGUGUUCU-CA---UGGAG------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAU
CCAG--UA-AGG----UCACGGGAAGAAGACCC-GU-UGAUAGGUU-CUAGGUGGAAG-U
AC-A----------------GU----------AA-----------UGUAUGUAGCCG--A
GGAAUACUAACA--GACCGAG-G-GCUUGUCCUU
>Synechocystis_sp.
G-GUCAAGCUAC--AAAGGGCUAAC-GGUGGAUA-CCUUGGC-ACACAG---AGGCGAAG
AAGGACGUGG-UUACCGACGAAACGCUUCGGGGAGCUGGAAACAAGCAU-----UGAUC-
CGG-AGGUGUCCGAAUGGGGCAACCC---AA------------------------G----
--------------------------UGAA-CUAC-CCG---CUGAA-------------
------UAAA--------------------------AUAG-GCGGGA-G-AG-AGCAAAC
CUAGUGAACUGAAACAUCUUAGUAGCUA--GAGGAAAAGAAAACAA-AAGUGAUUCUCCA
AGU-AG-CGGCGAGCGAACGGGGA-A-CA-GCCUAAACCAAU---CUUUUCG--------
--------------AAG-AUUGGGG--UCG------------UGGGACA------GCAA-
CG----------------------UGGAC---------UGAG---U-------AGAUU-A
GACG------AAG-CA-GCU----------------------------------------
----GAAAA-CUGCA-------CCAGAGGAGGUGAAAGUCCUGUA---------GUCGAA
A--AUUG------A--AUCAG-----------CCU---AGCU--GUAU----CCCGAGUA
GGUCGGAGCUCGUGGAAUUCCGAUUGAA-UCAGCCGGG-ACC--ACCCGGUAAGGCUAAA
UA--CUA-CUGUGUGACCGAUAGC-GUA--A-AGUACCGCGAGGGAAAG-GUGAAA-AGA
AC-CCCGUUGAGGGG-A-GUGAAAUAGAACAUGAAACCGUUAGCCUACAA-GCAAU-GGG
A---GCUC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------AUUAAA-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------CG--AGUGACCGUGUGCCUGUUGAAGAAUGAGCCGGCGACUUAC
-A-GGUUGUGGCA--GGUUAAGGUG--------UGUUG--------CACCGAA--GCCAA
AGUGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGCCU--------------
----------------------GAAUA-------------------------GG-G-CGU
-----------------------UAGUCACAAUUUGUA-GACCCGAACCC-GGGUGAUCU
AACCAUGGCCAGGAUGAAGCUUAGGUAACA-CUAAGUGGAGGUCCGA--ACCGACUA-AU
GUUGAAAAAUUAGCGGAUGAGCUGUGGUUAGGGGUGAAAUGCCAAUCGAACCCGG-AGCU
AGCUGGUUCUCCCCGAAAUGUGUUUAGGCGCAGCGGUUG-UAAA----------------
------------------------------------------------------------
-GUCA-ACUUGGGGGGUAAAGC-ACUGUUUCGC-UGC--GGGCGGC---GA-GA--GCUG
UACCAAAGUGAGGCAAACUCAGAAUACCCAA-----------------------------
------------------------------------------------------------
----------------------G--A-A-GA------AACGACC-AGUAAGA-C-GGUG-
G-GGGAUAAGCUUCAU-CGUCGAAAG-GGAAAC---AGCCCAGACCACCAGCUAAGGUCC
CCAAAU--CA-UCA-CU-AA---GU-GAG-------AAAGGAGGUGGGAGUGCAUUGACA
ACCAGGAGGUUUGCCUAGAAGCAGCAA-UCCUUAAAAGAGUGCGUAAUAGCUCACUGGUC
-----AAGCGCUCCUGCGCCGAAAAUG-AAC-GGGGCU-A-AGUGAUG----------UA
CCGAA-GCUGUGGACUCAGA----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------------UAUG
AG-UGGUAGGGGAGC-GUUCUGU-A-U-AGGGU-GAAGCAC--UAGCGGCAAGCA--G-G
UGUGGACAGU-ACA-GAAGUGAGAAUGU-CGGCUU-GAGUA-GCGAAA--AUAU-GGGUG
A--G---------------AAUCCC-AUA-CCCCGA-AAUCCU-AAGGGUUCC-UCCGGA
AGGCUCGUCCGCGGAGGGUUAGUCAGG-AC-CUAAGGCGAGGCCG-A-G-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-AACCGGUC
-AAUA-UUCCGGUACUGAU----UAUA------GAU------------------------
------------------------------------------------------------
------------------------------------UGUGGCGGGGGACGGAGAA-GGCU
AG-UGCAACUGG-AA-G----UUGGU----UACCAGUCC---AAGC-AUUCGA----G-G
-----CG--A--UG-----------------AGA-GAC---GG-----------------
---CGAAA-ACGU--CUUG------AGCAG----AGGUG-U-G-AUG--GG---------
------------------------------------------------------GA----
--GUCUCUACGGAGACGAAG-UGCA-U-GAUGUCAAGCUUC-C-AAGAAA-AGCCCGAAC
CACGU-------------------------------------------------UAAUUU
A-UAGUCACCUGUACCCGAAACCGACACAGGUA-GGAAGGUA-GAGAAUACUAAGGG-G-
CGCGAG-GUAACUCUC-UCUAAGGAACUCGGC-AAAAUUACCCCGUAACUUCGG-GAGAA
GGGGUG-CCUC-C-AG--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------CAAUGGA--GGUCGC
AGUGAAUAGGCCCAGGCGA-----CUGUUUACCAAAAACACAGGUCUCCGCAAAGUCG--
--UA-A-------------GACGCAGU-AUGGGGGCUGA-CGCCUGCCCAGUGCCG-G-A
AGGUUAAGGAAGUUGGUCA-GGGA---GUAA---UCCUGAAGCUAGCGACUGAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGCGUAACGAUC--UGGGCACUGUCUCGGAG----AGA-GG
CUCGGCGAAAUAGGAUUGUCUGUGAAGAUACGGACUCCCUGCACCUGGACAGAAAGA-CC
CUAUGAAGC-UUUACUGUAGCUUGGAAUUGGGUUCGGGCUUUGCUUGCGCAGGAU-AGGU
GGGAGACUAUG---AAGUUGC-UCU----------------------------UGUG---
-----------------------------------GG-AGUAAUGGAGUC-AA-CGGUGA
GAUA-CCACU-CUGGUGAGGCUAGAAUUCUAACUUGUU--CCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GG--------------------
--------------------------------------AGAAGGACA-AUUUCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGCGCGCAAAGGUUUCCU
CAGGCUGGUUGGAAAUCAGCCGAA-GAGUG-UAAAAGCAG-AAGGAAGCUUGACU-GUGA
----------------------------------GACUGA---CAAGUCAAACAGGGACG
AAA-GUCGGCUUUAGUGAUCCGAC-----------GGC---ACUGA-GUG----------
----------GAAGGGCCGUCGCUCAACGG-AUAAAAGUUACUCUAGGG-AUAACAGGCU
GAUCUCCGCCAAGAGUUCACAUCGACGCGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AACCUGGGGCGGUAGUACGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGU-----------------
---G-UAG--------------------------------------GCGU-AAGAGUAUU
GAGAGG-AGA-CUUCCUUAGUACGAGAGGAC-CGGGAAGUACGCACCUC-UGGUG-UACC
UGUUAUCGUGCCAACGGUAA-ACGCAGGGUAGCCAAGUGCGGAGUGGAUAACCGCUGAAA
GCA-UC--UAAGUGGGAAGCCCACCUCAA-G-AUGAGUACUCU-CA---UGGUG------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
CCAG--UA-AGG----UCACGGGAAGACUACCC-GU-UGAUAGGCU-CUAGAUGGAAG-U
CC-A----------------GU----------AA-----------UGGAUGAAGUCG--A
GGAGUACUAAUA--GACCGAG-G-GCUUGACCU-
>Thermoanaerobacter_tengcongensis
G-UCAAGUGAGG--UAAGGGCGCAU-GGUGGAUG-CCCAGGC-ACCUGG---AGCCGAUG
AAGGACGCGG-CAAGCGGCGAAACGCCCCGGGGAGCCGCAAGCGGGCGU-----UGAUC-
CGG-GGAUCUCCGAAUGGGGAAACCC---GC----UUGGG-G----------UAAU----
------A---C----C----C---AAGC-A-UCCG-CUG---AUGA--------------
------AUCCA--------------------------UAG-UC-AGC-G-GA-GGGGAAC
CGGGCGAACUGAAACAUCUCAGUAGCCC--GAGGAAAAGAAAGCAA-AAGCGAUUCCCCG
AGU-AG-UGGCGAGCGAAAGGGGA-A-GA-GCCCAAACCUAC---CGCUUAG--------
--------------GCG-GUAGGGG--UU-------------CGGGCCC------ACCG-
CA---------------------AAAGUG----------UGCGAGU-------ACUCU-A
GGCG------AACGGA-CCUG---------------------------------------
----GAAAG-GCCGG-------CCAUAGAGGGUGAAAGCCCCGUA---------GCCGAA
A--GGGG------A--AAGCG----------CACU---GGUG--GGUA----CCAGAGUA
CCACGGGAUAGGCG--ACCCUGUGGGAA-GGAGGGAGG-ACC--ACCUCCUAAGGCUAAA
UA--CUC-C-AGGUGACCGAUAGC-GCA--U-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAACCUGAAACCAUGUGCCCACAA-GCAGU-CAG
A---GCCU-G---GG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UAAU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------ACCA--GGUGAUGGCGUACUUUUUGCAGUACGGGCCGGCGAGUUAU
-G-GUAGCGAGCGA-GGUUAAGGGUA--------GAGA-------UACCCGGA--GCCGA
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAAGA-------------------------GG-G-CGG
----------------------AAAGUUCGCUGCCAUA-GACCCGAAACC-GUGCGACCU
ACCCAUGGCCAGGGUGAAGCCGGAAUAAAA-UCUGGUGGAGGCCCGA--ACCCGUUG-GC
CGUGAAAAGCCAUGGGAUGAGCUGUGGGUAGCGGUGAAAUGCCAAUCGAGCACGG-AGAU
AGCUGGUUCUCCCCGAAAUAGCUUUAGGGCUAGCCUCAG-GGU-----------------
------------------------------------------------------------
-AAAG-CCUGUGGAGGUAGAGCCACUGACUGGG-CUA--GGGGCC----GA-GA---GGC
UACCGAACCCUAUCAAACUCCGAAUGCCACA-----------------------------
------------------------------------------------------------
----------------------GGCA-A-GU------ACCUGGG-AGUCAGA-C-CACG-
A-GUGAUAAGAUCCGU-GGUCGAGAG-GGGAAC---AGCCCAGACCCCCAGCUAAGGUCC
CGAAGG--GC-AUG-UU-AA---GU-GGG-------AAAGGAAGUGGGACUUCGAAGACA
ACCGGGAUGUUGGCUUAGAAGCAGCCAUACAUUUAAAGAGUGCGUAACAGCUCACCGGUC
-----GAGAGGUCCUGCGCCGAAAAUG-AAC-GGGGCUCA-AACAUGC----------CA
CCGAA-GCUGGGGCUGCGCGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------------AAGCG
CG-GGGUAGGGGAGC-GUACUGC-G-C-GGGCA-GAAGGCU--G-AGCGUAAGCG--A-G
GCUGGACUGC-GCA-GUAGUGAGAAUGC-CGGCAU-GAGUA-GCGAGA---GCA-AGGUG
A--G---------------AAACCU-UGC-CGCCGG-AAGCCU-AAGGUUUCC-UGGGGA
AGGGUAAUCCGCCCAGGGUAAGUCGGG-GC-CUAAGCCGAGGCCG-G-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GGC-GA-U--GGGA-AACCGGUU
-GAUA-UUCCGGUACCACC----GAGG------GCC----------GCUUGA--------
------------------------------------------------------------
------------------------------------GGGAAGCGGGGACGCAGCG-AGGU
AG-GCGGAGCGC-GCGG----UUGGU----AGAGCGCGU-CCAACC-AGCCA-------C
-----CG--A-AGG------------------GC-ACG-UAGG-----------------
---CAAAU-CCGCGUGCUG-----GCAGGG----GGCUG-G-G-AAG--GG---------
------------------------------------------------------------
-GAGCCG-----CAAGGCGA-AGCC-G-CCGAGGCAGCUGC-C-AAGAAA-AGCCGCUAC
CG-----------------------------------------------------AGGCC
U-GAGGUGCCCGUACCGCAAACCGACACAGGUA-GGCGAGGA-GAGAAUCCACAGGC-G-
AGCGGG-AGAACCCUC-CUUAAGGAACUCGGC-AAAUUGACCCCGUAACUUCGG-GAGAA
GGGGUG-CCUCCC-UC--AGGCUUAGAGU----------UUAUU----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------GCUC-UAGGCUUGAGAA--GGCCGC
AGAGAAGAGGCCCAAGCGA-----CUGUUUACCAAAAACACAGGUCUCUGCUAAGCCG--
--AA-A-------------GGCGAAGU-AUAGGGGCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGGGGAAGGGU----------GAAA----------GCCCUGAACCGAAGCCC--
CAGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAAGGCGUAACGACU--UGGGCGCUGUCUCGAGG----AGG-GG
CCCGGCGAAGUUGUAGUGCUCGUGAAGAUGCGAGCUACCCGCGAUUGGACGGAAAGA-CC
CCGUGGAGC-UUUACUGUAGCCUGUCACUGGGUCCUGGUAGUUCCUGUACAGGAU-AGGU
GGGAGACUGAG---AAGGUGG-CGC----------------------------GCCA---
-----------------------------------GC-GUCACUGGAGUC-GC-CGGUGG
GAUA-CCACC-CUGGGACUACUGGGGUCCUAACCUAUA--GCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GC--------------------
--------------------------------------GUAGGGACA-AUGGCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGCGCCCAAAGGUCCCCU
CAGCGCGGACGGAAAUCGCGCGUC-GAGUG-CAAGGGCAG-AAGGGGGCUUGACU-GUGA
----------------------------------GACCGA---CGGGUCGAGCAGGGACG
AAA-GUCGGGCCUAGUGAUCCGAC-----------GGU---AGCGA-GUG----------
----------GGAGUGCCGUCGCUCAACGG-AUAAAAGCUACCCCGGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGAAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUC-----------------
---G-CGG--------------------------------------GCGC-AGGAGACUU
GAGGGG-AGC-UGCCCCUAGUACGAGAGGAC-CGGGGCGGACGAGCCGA-UGGUG-UACC
AGUUGCACCGCCAGGUGCAC-A-GCUGGGUAGCCAAGCUCGUAUGGGAUAAACGCUGAAA
GCA-UC--UAAGCGUGAAGCCCACCCCAA-G-AUAAGGUCUCC-CA---CCUCG------
-------------U----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
AGGG--UA-AGG----CACCUCGAAGAAGACGAGGU-AGAUAGGCC-GGGGGUGUAAG-A
GC-G----------------GA----------AA-----------CGCUCUUAGCUG--A
CCGGUACUAAUA--AGCCGAG-G-ACUUGACCCU
>Thermosynechococcus_elongatus
G-GUCAAGCUAC--AAAGAGCCUAC-GGUGGAUA-CCUAGGC-ACACAG---AGGCGAUG
AAGGACGUGG-AUACCGACGAUACGCUUCGGGGAGCUGGAAACAAGCUU-----UGAUC-
CGG-AGGUCUCCGAAUGGGGCAACCC---AG-----------------------------
--------------------------UA-A-CUCU-AAC---GCC---------------
------AAUCC---------------------------AU-AA-UUA-G-AG-GGCGAAC
CUGGCGAACUGAAACAUCUUAGUAGCCA--GAGGAAAAGAAAGAAA-ACUCGAUUCCCUU
AGU-AG-CGGCGAGCGAAAGGGGA-A-CA-GCCUAAACCAAC---GGGCUUG--------
--------------CCC-GUUGGGG--UCG------------UGGGACA------GCAA-
CA----------------------UGGAA---------UUGG---G-------CGGCU-A
GACG------AAG-UA-GUG----------------------------------------
----GAAUG-CUACA-------CCAGAGAAGGUGAAAGUCCUGUA---------GUCGAA
A--GCUU------A--ACAAU-----------CCU---AGCU--GUAU----CCCGAGUA
GUCCGGAGCACGUGGAAUUCCGGAUGAA-UCUGCGAGG-ACC--ACCUCGUAAGGCUAAA
UA--CUC-CUGUGUGACCGAUAGC-GCA--U-AGUACCGCGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-AAGGGG-A-GUGAAAUAGAGCAUGAAACCGUAGGCUUACAA-GCAGU-CGA
A---GCUC-G--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------AUUUAA-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------CG--AGUGACGGCGUGCCUGUUGAAGAAUGAGCCGGCGACUUAU
-A-GGUACUGGCA--GGUUAAGGCA---------AAAA--------UGCCGAA--GCCAU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGU
-----------------------UUGUCAGUACUUAUA-GACCCGAACCC-GGGUGAUCU
AACCAUGGCCAGAAUGAAGCUUGGGUAACA-CCAAGUGGAGGUUCGC--ACCGACCG-AU
GUUGAAAAAUCGGCGGAUGAGCUGUGGUUAGGGGUGAAAUGCCAAUCGAACCCGG-AGCU
AGCUGGUUCUCCCCGAAAUAUGUUGAGGCAUAGCGGUUG-UGA-----------------
------------------------------------------------------------
-UUAU-AGCAGGGGGGUAAAGC-ACUGAUUCGG-UGC--GGGCUGC---GA-GA--GCGG
UACCAAAUCGAGUCAAACUCUGAAUACCCUG-----------------------------
------------------------------------------------------------
----------------------U-GU-A-CA------CACAGCC-AGUCAGA-C-GGUG-
G-GGGAUAAGCUUCAU-CGUCGAGAG-GGAAAC---AGCCCAGACCACCAGCUAAGGUCC
CCAAAU--CA-UCA-CU-AA---GU-GGC-------AAAGGAGGUGGGGAUGCUCAGACA
ACCAGGAGGUUUGCCUAGAAGCAGCCA-UCCUUAAAAGAGUGCGUAAUAGCUCACUGGUC
-----AAGCGUUCCUGCGCCGAAAAUG-AAC-GGGACU-A-AGUGAUG----------UA
CCGAA-GCUGUGGACUUACUA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------------CGUA
AG-UGGUAGGGGAGC-GUUCUGC-ACU-AGUUU-GAAGCAC--UAGC-GUAAGCA--G-G
UGUGGACGAA-GCA-GAAGUGAGAAUGC-CGGCUU-GAGUA-GCGAAA--ACAU-UGGUG
A--G---------------AAUCCA-AUG-CCCCGA-AACCCC-AAGGGUUCC-UUCGGA
AGGCUCGUCCGCGAAGGGUUAGUCGGG-AC-CUAAGGCGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-AACUGGUC
-AAUA-UUCCAGUACUCAU----CUUG------GUU------------------------
------------------------------------------------------------
------------------------------------UGUGCAGAGGGACGAAGAA-GGCU
AG-AUCAGCCGG-AU-G----UUGGU----UACCGGUUC---AACU-GUCCGA----G-G
-----UG--U--UG-----------------AGG-AGC---GG-----------------
---UGAAA-ACGC--UCUG------AGCUG----AGGCA-G-G-AGU--AC---------
------------------------------------------------------GA----
-CCCAC-UACGGUGGGGAAG-UGAU-U-GAUGUCAUGCUUC-C-AAGAAA-AGCUCUAAG
CACG--------------------------------------------------UUAAGC
C-AAGAUACCCGUACCCGAAACCGACACAGGUG-GGGGGGUA-GAGUAUACCAAGGG-G-
CGCGAG-AUAACUCUC-UCUAAGGAACUCGGC-AAAAUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCAC-C-GA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGGU--GGUCGC
AGUGAAGAGGCCCAGGCGA-----CUGUUUACCAAAAACACAGGUCUCCGCUAAGUCG--
--UA-A-------------GACGAUGU-AUGGGGGCUGA-CGCCUGCCCAGUGCCG-G-A
AGGUUAAGGAAGCCGGUCA-GC-----GCAA-----GCGAAGCUGGCGACCGAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAAGGCGUAACGAUC--UGGGCGCUGUCUCGGAG----AGA-GG
CUCGGCGAAAUAGAAGUGUCUGUGAAGAUGCGGACUACCUGCACCCGGACAGAAAGA-CC
CUAUGAAGC-UUUACUGUAGCCUGGAAUUGGGUUCGGGCUUUGCUUGCGCAGGAU-AGGU
GGGAGACGUUG---AAGUAUC-CCU----------------------------UGCG---
-----------------------------------GG-GGAUAUGGAGUC-GC-CAGUGA
GAUA-CCACU-CUGGCAAGGCUAGAAUUCUAACCUUCU--GCUG-U-UAGC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CA----GC--------------------
--------------------------------------GAAGGAACA-GUUUCAGGUGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAUGGUAAC-GGAGGCGCGCAAAGGUUCCCU
CAGGCUGGUCGGAAAUCAGCCGUA-GAGUG-CAAAGGCAU-AAGGGAGCUUGACU-GCAA
----------------------------------GACCUA---CAAGUCGAGCAGAGACG
AAA-GUCGGCCUUAGUGAUCCGAC-----------GGU---UCCGC-GUG----------
----------GAAGGGCCGUCGCUCAACGG-AUAAAAGUUACUCUAGGG-AUAACAGGCU
GAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGC
AACCUGGGGCGGUAGUACGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGU-----------------
---G-CAG--------------------------------------GCGU-AGGAGCAUU
GAGAGG-AGU-CCUCCUUAGUACGAGAGGAC-CGGGAGGAACGCACCUC-UGGUG-UACC
UGUUAUCGUGCCAACGGUAA-ACGCAGGGUAGCCAUGUGCGGAGUGGAUAACCGCUGAAA
GCA-UC--UAAGUGGGAAGCCCACCUCAA-G-AUGAGUGCUCC-CA---UGGCA------
-------------U----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
CCAG--UA-AGG----UCACGGGUAGAACACCC-GU-UAAUAGGCU-CCCGAUGGAAG-U
CC-A----------------GU----------AA-----------UGGAUGAAGUCU--A
GGAGUACUAAUA--GACCGAG-G-GCUUGACCUC
>Thermotoga_maritima
G-GUCAAGGUAC--UAAGGGCACGC-GGUGGAUG-CCUUGGC-GGCGGG---AGGCGAUG
AAGGGCGUGG-CAAGCUGCGAUAAGCCCGGGGGAGCCGCAAGCAGGCGU-----UGAUC-
CCG-GGAUUCCCGAAUGGGGAAACCU---GG----GUGGC-CG----------UUG----
-----AG---G----C----C---ACUC-G-CCGCCGAA---------------------
------AGGC--------------------------------G-GUG-C-GA-----CAC
CGGGGGAAGUGAAACAUCUCAGUACCCC--GAGGAAAAGAAAUCAA-CCGAGAUUCCCCU
AGU-AG-CGGCGAGCGAACGGGGA-G-GA-GCCCAAACCAGCG-UGGUGUCAAAGCCCG-
UGGG---CGU-UG-CCACGCUGGGG--UUG------------UGGGACA------CGGC-
CGGGCGA-GGCCACGGACUCGCCGGGGAGUUACAAA--UCCC---U-------CCUCU-A
GCCG------AAC-CA-CCUG---------------------------------------
----GGAAG-GUGGG-------CCGGAGAGGGUGACAGCCCCGUA---------GGCGAA
A--GGGG------A--GGGAC----------UCCCUGGGCCG--UGCU----CCCGAGUA
CCACGGGACACGUGGAAUCCCGUGGGAA-GCUGGGGGG-ACC--ACCCUCCAAGGCUAAA
UA--CUA-CCCGCCGUCCGAUAGC-GCAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGC
AC-CCCGG-AAGGGG-A-GUGAAAGAGGACCUGAAACCGCGUGCCUACAA-GAAGU-CGG
A---GCCC-C---C----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------AUUU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------GGG--GGUGACGGCGUGCCUUUUGAUUAAUGAGCCCGCGAGUUGC
-C-GUCGGUGGCGA-GGUUAAGCCG---------ACGA--------AGGCGUA--GCCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAACA-------------------------GG-G-CGC
----------------------UCAGUCACCGGCGGCA-GACCCGAAGCC-GGGUGAGCU
ACCCCUGGGCAGGGUGAAGGUGGGUUAAAA-CCCACUGGAGGCCCGA--ACCGGUGG-AC
AGUGAAAAGUCCUCGGAUGACCUGGGGGUAGGAGUGAAAAGCUAACCGAACCCGG-UGAU
AGCUGGUUCUCCCCGAAAUGCAUUGAGGUGCAGCCUCGG-GCG-----------------
------------------------------------------------------------
-GUCU-GUGCAGGGGGUAGAGC-ACUGAUGGGG-CUA--GGGGG-----GU-UU----CC
U-CCGAACCCCGUCAAACUCCGAAUCCCUGC-----------------------------
------------------------------------------------------------
----------------------ACAC-A-AA------GCCCGGG-AGUGAGC-C-CGCG-
G-GGGAUAAGCUCCGC-GGACGAGAG-GGGAAC---AACCCAGACCGCCGGCUAAGGGCC
CGAAGA--GG-UGG-CU-AA---GU-GGU-------AAAGGAUGUGGAGCGCCUAAGACA
GCUGGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAGUGCGUAACAGCUCACCAGCC
-----GAGGCGCUCUGCACCGAAAAUGUAAC-GGGGCUCA-AGCCACC----------CC
CCGAA-GCCGCGGGUCAGUACC--------------------------------------
------------------------------------------------------------
--------------UCCG------------------------------------------
-------------------------------------------------CUGGAGGUACU
GG-CGGUAGGGGAGC-UUUCCGC-UGU-AGGGU-GAAGGCG--GACCCGCGAGGG--C-C
GCUGGACGAG-GCG-GAAGUGAGAAUGC-GGGCAU-GAGUACGCGA-A--AGGA-GGGUG
A--G---------------AAUCCC-UCC-CCCCGU-AAGCCC-AAGGGUACC-UGGGGA
AGGUUCGUCCGCCCAGGGUUAGCCGGGACC-CUAAGGUGAACCCG-A-A-AGGG----GU
A-----------------------------------------------------------
-------------------------------------GCC-GA-A--GGGA-AGCCGGUU
-AAUA-UUCCGGCGCCACC----UGCG------GUC----------GAU-----------
------------------------------------------------------------
----------------------------------GGUACGAGGGGUGACGCAGGA-GGGU
AG-GCGCCGGGG-GC-A----AGUGG----CAUGCCCCU-CCAAGC-GGUUA-----G-G
-----G------CG-------------AUGACGG-GCG-UAGG-----------------
---UAAAU-CCGCGCCCCG-----AGCCUG----AGCCG-U-G-AUG--GG---------
------------------------------------------------------GA----
GGUCCCUUCGGGGACCAACG-GCGC-U-GACCCCACACUGC-C-GAGAAA-AACCUCGCG
UACCG----------------------------------------------CUUGAGACC
G-UAGGUGCCCGUUCCGCAAACCGACACAGGUG-GGCGGGCU-GAGAAGGCUCAGGG-G-
AGCGGG-UUAACCCUC-GCCAAGGAACUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCGC-G-UU-AGGGUGAACCCAGGGGAAGGGGCAACCCGGAAA----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------CUGGGGGAGCCCGAGGC--GGUCGC
AGUGACAAGGCCCUGGCGA-----CUGUUUACCAAAAACACAGGUCUCUGCUAACUCGA-
--AA-A-------------GAGGAAGU-AUAGGGACUGA-CGCCUGCCCAGUGCCG-G-A
AGGUUAAGGGGAGGGGUGAGGCUCCCCU-UGUGGGAGCGUAGCUCCGACCCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCAUGAAUGGCGUAACGACU--GGGGCACUGUCUCGGCG----GGG-GG
CCCGGCGAAAUUUCAGUCUGGGUGAAGAUGCCCAGUACCCGCGGCUAGACGGAAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGGUAUUGGGCUCUGGUGCAUCGUGUAUAGCAU-AGGU
GGGAGGCUGUG---AAGCCGC-CUC----------------------------GCCA---
-----------------------------------GG-GGCGGUGGAGCC-GC-CAGUGG
AAUA-CCACC-CUCGGUGCACUGGAGUCCUAACCUGAC--CCUGUG-AAGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------GCA----GG--------------------
--------------------------------------GUGGGGACA-GUGCCAGGUGGG
CAGUUUGACUGGGGCGGU-CACCUCCUA-AAAGGUAAC-GGAGGUGUGCAAAGGUCGGCU
CAGGUGGGUUGGAAAUCCACCGCA-GAGUG-CAAGGGCAU-AAGCCGGCCUGACU-GCGA
----------------------------------GGCCGA---CAGGCCGAGCAGGGGGG
AAA-CCCGGCCCUAGUGACCCGGC-----------GGU---CCCGU-GUG----------
----------GAAGGGCCGUCGAUCAACGG-AUAAAAGUUACCCCGGGG-AUAACAGGCU
GGUCCCGCCCGAGAGUUCACAUCGACGGCGGGGUUCGGCACCUCGAUGUCGGCUCAUCCC
AUCCUGGGGCUGAAGCAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGGGGUACGUGA
GCUGGGUUCAGACCGUCGUGAGACAGGUCGGUCCCUAUCUGCC-----------------
---G-CGG--------------------------------------GCGU-AGGAGGCUU
GAGGGG-GGU-CCUCCCUUGUACGAGAGGAC-CGGGAGGAGGGGGCCUC-UGGUG-UACC
GGCUGUCGCGCCAGCGGCAU-ACGCCGGGUAGCUACGCCCCUAAGCGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCGCGCCCCAA-G-AUUAGGCCUCC-CA---UCCCG------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
GGAG--UA-AGG----CCGGUCCGAGAAGAGGACCU-UGAUAGGCC-GGGGGUGUAAG-C
GC-C----------------GC----------AA------------GCGUUGAGCCC--A
CCGGUACUAAUC--GGCCGAG-G-CCUUGACCUC
>Thermus_thermophilus
G-GUCAAGAUGG--UAAGGGCCCAC-GGUGGAUG-CCUCGGC-ACCC-G---AGCCGAUG
AAGGACGUGG-CUACCUGCGAUAAGCCAGGGGGAGCCGGUAGCGGGCGU-----GGAUC-
CCU-GGAUGUCCGAAUGGGGGAACCC---GG----CCGGC-G----------GGAA----
------C---G----C----C---GGUC-A-CCGC-GC----------------------
------UUUU----------------------------------GCG-C-GG-GGGGAAC
CUGGGGAACUGAAACAUCUCAGUACCCA--GAGGAGAGGAAAGAGA-AAUCGACUCCCUG
AGU-AG-CGGCGAGCGAAAGGGGA-C-CA-GCCUAAACCGUC---CGGCUU---------
------------G-UCCGGGCGGGG--UCG------------UGGGGCC------CUCG-
GA----------------------CACCG--------AAUCC--CC-------AGCCU-A
GCCG------AAG-CU-GUUG---------------------------------------
----GGAAG-CAGCG-------CCAGAGAGGGUGAAAGCCCCGUA---------GGCGAA
A--GGUG------G--GGGGA----------UAGG---UGAG--GGUA----CCCGAGUA
CCCCGUGGUUCGUGGAGCCAUGGGGGAA-UCUGGGCGG-ACC--ACCGCCUAAGGCUAAG
UA--CUC-C-GGGUGACCGAUAGC-GCAC-C-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAGCCUGAAACCGUGGGCUUACAA-GCAGU-CAC
G---GCCC-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--GGUUGUGGCGUGCCUAUUGAAGCAUGAGCCGGCGACUCAC
-G-GUCGUGGGCGA-GCUUAAGCC---------GUUGA---------GGCGGA--GGCGU
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCC--------------
----------------------GAACA-------------------------GG-G-CGC
AAGCGGGCCGCACGCGGCCCGCAAAGUCCGCGGCCGUG-GACCCGAAACC-GGGCGAGCU
AGCCCUGGCCAGGGUGAAGCUGGGGUGAGA-CCCAGUGGAGGCCCGA--ACCGGUGG-GG
GAUGCAAACCCCUCGGAUGAGCUGGGGCUAGGAGUGAAAAGCUAACCGAGCCCGG-AGAU
AGCUGGUUCUCCCCGAAAUGACUUUAGGGUCAGCCUCAG-GCG-----------------
------------------------------------------------------------
-CUGA-CUGGGGCCUGUAGAGC-ACUGAUAGGG-CUA--GGGGGCC---CA-CC--AGCC
UACCAAACCCUGUCAAACUCCGAAGGGUCCC-----------------------------
------------------------------------------------------------
----------------------AGGU-G-GA------GCCUGGG-AGUGAGG-G-CGCG-
A-GCGAUAACGUCCGC-GUCCGAGCGCGGGAAC---AACCGAGACCGCCAGCUAAGGCCC
CCAAGU--CU-GGG-CU-AA---GU-GGU-------AAAGGAUGUGGCGCCGCGAAGACA
GCCAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAGUGCGUAAUAGCUCACUGGUC
-----GAGUGGCGCCGCGCCGAAAAUG-AUC-GGGGCUUA-AGCCCAG----------CG
CCGAA-GCUGCGGGUCUGGGGGA-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------UGACCCCA
GG-CGGUAGGGGAGC-GUUCCCG-AUG-CCGAU-GAAGGCC--GACCCGCGAGGG--C-G
GCUGGAGGUA-AGG-GAAGUGCGAAUGC-CGGCAU-GAGUA-ACGAUA--AAGA-GGGUG
A--G---------------AAUCCC-UCU-CGCCGU-AAGCCC-AAGGGUUCC-UACGCA
AUGGUCGUCAGCGUAGGGUUAGGCGGG-AC-CUAAGGUGAAGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GCC-GA-A--GGGC-AGCCGGUU
-AAUA-UUCCGGCCCUUCC----CGCA------GGU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGCUCUA-GGCU
AG-GGGGACCGG-AGCC----AUGGA----CGAGCCCGG-CCAGAA-GCGCA-----G-G
-----G------UG------------------GG-AGG-UAGG-----------------
---CAAAU-CCGCCUCCCA--ACAAGCUC------UGCG-U-G-GUG--GG---------
------------------------------------------------------GA----
-AGCCCGUACGGGUGACAAC-CCCC-C-GAAGCCAGGGAGC-C-AAGAAA-AGCCUCUAA
GCAC---------------------------------------------------AACCU
G-CGGGAACCCGUACCGCAAACCGACACAGGUG-GGCGGGUGCAAGAGCACUCAGGC-G-
CGCGGG-AGAACCCUC-GCCAAGGAACUCUGC-AAGUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CUCC-C-UG--GGGUGA------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------UGAGCCCCGGGG--AGCCGC
AGUGAACAGGCUCUGGCGA-----CUGUUUACCAAAAACACAGCUCUCUGCGAACUCG--
--UA-A-------------GAGGAGGU-AUAGGGAGCGA-CGCUUGCCCGGUGCCG-G-A
AGGUCAAGGGGAGGGGU----------GCAA----------GCCCCGAACCGAAGCCC--
CGGUGAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAAAGCGUAACGACC--GGAGCGCUGUCUCGGCG----AGG-GA
CCCGGUGAAAUUGAACUGGCCGUGAAGAUGCGGCCUACCCGUGGCAGGACGAAAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGGUGUUGGCUCUUGGUCGCGCCUGCGUAGGAU-AGGU
GGGAGCCUGUG---AACCCCC-GCC----------------------------UCCG---
-----------------------------------GG-UGGGGGGGAGGC-GC-CGGUGA
AAUA-CCACC-CUGGCGCGGCUGGGGGCCUAACCC-UC---------GGAU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GGGGGGACA-GCGCUUGGCGGG
CAGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGCGCCCAAAGGUCCCCU
CAGGCGGGACGGAAAUCCGCCGGA-GAGCG-CAAGGGUAG-AAGGGGGCCUGACU-GCGA
----------------------------------GGCCUG---CAAGCCGAGCAGGGGCG
AAA-GCCGGGCCUAGUGAACCGGU-----------GGU---CCCGU-GUG----------
----------GAAGGGCCAUCGAUCAACGG-AUAAAAGUUACCCCGGGG-AUAACAGGCU
GAUCUCCCCCGAGCGUCCACAGCGGCGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGAAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCCGCC-----------------
---A-CGG--------------------------------------GCGC-AGGAGGCUU
GAGGGG-GGC-UCUUCCUAGUACGAGAGGAC-CGGAAGGGACGCACCUC-UGGUU-UCCC
AGCUGUCCCUCCAGGGGCAU-AAGCUGGGUAGCCAUGUGCGGAAGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCCGCCCCAA-G-AUGAGGCCUCC-CA---CGGCG------
-------------UC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------AAG
CCGG--UA-AGG----ACCCGGGAAGACCACCCGGU-GGAUGGGCC-GGGGGUGUAAG-C
GC-C----------------GC----------GA-----------GGCGUUGAGCCG--A
CCGGUCCCAAUC--GUCCGAG-G-UCUUGACC--
>Treponema_pallidum
-------GCGAA--UAGUGGUUUAC-GGUGGAUG-UCUUGGA-GUUGUC---AGGCGAUG
AAGGUCGUGA-UAAGCUGCGAAAAGCCUCGGGGAGGAGCACAUGUCCUG-----UGAUC-
CGG-GGAUGACCGAAUGGGGUAACCC---GA----CAGGG-U-----------AAA----
------G---C----C----U---UGUC-A-UUGC-CUU---CCUGA-------------
------AUGAA-------------------------UAGG-GA-GGG-U-AAGGCGAAAC
UGGGUGAACUGAACCAUCUAAGUAACUU--G-GGAAAAGAAAUCAA-GAGAGAUUCCGAA
AGU-AG-UGGCGAGCGAAAUUGGA-G-GA-GCCUAAACCUG----UGUCUAA--------
-----------CAGGGGUUGUAGGG--CCG-----------CGCGGGCU------UGCGU
UC---------------------GGUGGGUGAAAUA-AUCCG---G-------CCUAU-A
GCAG-A----AAG-GU-UUUG---------------------------------------
----GGAAA-GCCUG-------ACAGAGAGGGUGAAAUCCCCGUA---------UGCGGA
A--UGGG------G--CGGAC----------CUGCU-GGUGC--GGUA----CCUGAGUA
CGGCGGGACACGAGGAAUCCUGUCGGAA-UCUGGGUCG-ACC--ACGAUCUAAGGCUAAA
UA--CUC-GACAACUACCGAUAGU-GGAC-A-AGUACCGUGAGGGAAAG-AUGAAA-AGA
AC-CCCGGUGAGGGG-A-GUGAAAUAGAACCUGAAACCGUAAACCAACAA-GAUGU-UAC
A---GCCU----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GUGA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------G--GGUGGUAGCGUGCCUUUUGUAGAAUGAGCCUGCGAGUUAC
-G-GUGUGCAGCAA-GGUUAAGGGAU--------AGGA-------GUCCUGGA--GCCGG
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAAAA-------------------------GG-G-CGU
--------------------GGUGAGUUGUACGUCGUA-GACCCGAAGCCAGGGUGAUCU
AGUUAUGAGCAGGUUGAAACAGGGGUGAAG-CCUUGUGGAGGACCGA--ACUAUAAU-CU
GUUAAAAAAGGUAUGGAUGACUUGUGACUAGGAGUGAAAGGCUAAACAAACCUGG-AGAU
AGCUGGUUCUCCCCGAAAUGCCUUUAGGGACAGCCUUAU-ACA-----------------
------------------------------------------------------------
--AAA-CUGUCGGAGGUAAAGC-ACUGGAUGGG-CUA--GGGGGUU---UC-AU--CGCC
UACCAAACCCAAUCAAACUCUGAAUGCCGGC-----------------------------
------------------------------------------------------------
----------------------AGUC-A-AC------GUGUGGG-AGUGAGA-C-UGCG-
U-GCGACAAGGUUCGU-AGUCGAGAG-GGAAAC---AGCCCAGACCGUCAGCUAAGGUCC
CGAAAU--AC-CGC-UU-GA---GU-GUG-------AAAUGAAGUGUGGGUACCUGGACA
GCCAGGAGGUUGGCUUAGAAGCAGCCAUUCCUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----GAGUACGCAUGCGCAGAUAAUGUAUC-GGGGCU-A-AGCGGUA----------UA
CCGAA-GCUACGGGUCUUGCAU--------------------------------------
------------------------------------------------------------
--------------UUU-------------------------------------------
----------------------------------------------------UGGUGCAA
GG-CGGUAGGGGAGC-AUUCCAU-GUA-CUGAU-GAAGGAA--UAUCCGGGAGGA--G-U
UCUGGAGGGG-AUG-GAAGAGAGAAUGC-AGGUAU-AAGUACACGAAA--AGGA-GGGUG
A--G---------------AUUCCU-UCC-CGCCGA-AAACCU-AAGGUUUCC-UGGGUG
AAGGUCAUCUGCUCAGGGUAAGUCGGC-CC-CUAAGGCGAGGACG-A-G-GGUC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AUCCGGUU
-UAUA-UUCCGGAACCUCU----UGCA------AUU------------------------
------------------------------------------------------------
------------------------------------UCGAUGGCAGGACGCGUGA-GGUG
AAGCCCGGCCAA-AG-A----UUGGU----AGUUUUGGU-CUAAGU-AUCCGA----G-C
-----CGUUUUAAG------------------AG-CGA-UAGG-----------------
---CAAAU-CCGUCGUUCGAGGUAAGGUGC----GAGUG-C-G-ACU--GG---------
------------------------------------------------------AGC---
-GAUGAG---CGAAGGGAAG-CAGG-U-GUAGUCAUGGCGA-C-GGGAAAUACUGUCUAA
GGUU---------------------------------------------------AGGUU
G-CAAGAGACCGUACCGCAAACCGACACAGGUA-GGUAGGAU-GAGUAAUCUAAGGC-G-
CUCGAG-AGAACUCGC-GUCAAGGAACUCGGC-AAAAUACACACGUAACCUCGG-GAGAA
GUGUGA-CCCU-U-GC--CU----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------UUGGUGAG--GGUGGC
AGAAAGCAGGUCCAGGCGA-----CUGUUUAUCAAAAACAUAGCCAUCUGCAAAUCAG--
--UA-A-------------UGAGACGU-AUAGGUGGUGA-CACCUGCCCGGUGCUG-G-A
AGGUUAAGAGGAGAGGUUC-GUGG---UAAC-----ACAACGCUUUGAAUUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAUGGUGUAACGACU-CUGGACACUGUCUCGACG----CGA-GA
CUCGGUGAAAUUUAUGUACCGGUAAAGAAGCCGGUUACCCAUAGUUAGACGGAAAGA-CC
CCGUGAACC-UUCACCGUAGCUUACUAUUGGAACUUGGUUUACCAUGUGUAGUAU-AGGU
GGGAGACAGAG---AAGCUUG-GCC----------------------------GUCA---
-----------------------------------GG-UUAGGCGGAGUC-AA-CAGUGA
AAUA-CCACC-CUUGGUACGUCAGGUUUCUAACCUUUG--GCCG-UGGAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GC--------------------
--------------------------------------AAAGGGACC-GUGGUAGGUGGG
CGGUUUGACUGGGGCGGU-CGCCUCCUA-AAAGGUAAC-GGAGGUGCGCGAAGGUCUCCU
CACACCGGUUGGAAAUCGGUGCGC-GAGUG-UAAAGGCAC-AAGGAGGCUUAACU-GCGA
----------------------------------GACCGA---CAGGUCGAGCAGAUACG
AAA-GUAGGUCUUAGUGAUCUGGC-----------GGU---AGCGU-GUG----------
----------GAAGCGCCGUCACUUAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUUUUCCCCAAGAGUUCACAUCGACGGGAAAGUUUGGCACCUCGAUGUCGGCUCAUCGC
AUCCUGGGGCUGAAGCAGGUCCCAAGGGUUUGGCUGUUCGCCAAUUAAAGCGGUACGUGA
GCUGGGUUCAGAACGUCGCGAGACAGUUCGGUCCCUAUCUGCU-----------------
---A-UGG--------------------------------------GCGU-UGGAUAUGU
GAGAGG-AGC-UGCUUUUAGUACGAGAGGAC-CGAAGUGGACGAACCUC-UGGUG-UACC
AGUUAUCCUGCCAAGGGUAC-GUGCUGGGUAGCUAUGUUCGGAAGGGAUAACCGCUGAAG
GCA-UC--UAAGUGGGAAGCCCGCCUCAA-G-AUUACAUAUCC-CU---GAAGG------
-------------UU---------GA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------CCU
UCCU--GA-AGA----CUCCUUGCACACUACAAGGU-CGAUAGGCU-GGAGGUCUACG-U
AC-C----------------GU----------AA-----------GGUAUUAAGCCG--A
CCAGUACUAAUA--AGUCGUGAG-GCUUGACCAU
>Tropheryma_whipplei
A-UUCAAGCUACUUUAAGAGCAAAU-GGUGGAUG-CCUUGGU-AUCUGG---AGCCGAAG
AAGGACGUAG-CAAUCUGCGAUAAGCCUCGGGAAGCUGAUAAGCGAGCU----UUGAUC-
CGA-GGAUUUCCGAAUGGGGAAACCU---GG----UGGGG-CGCA-------GCAA----
---UGCG--AC----C----C---UGUC-A-CUCC-CGC---CUGA--------------
------AUAUA--------------------------UAG-GG-CGG-GCAG-AGGGAAC
GUGGGGAAGUGAAACAUCUCAGUACCCA--CAGGAAGAGAAAGCAA-UAGCGAUUCCGUU
AGU-AG-UGGCGAGCGAAACCGGA-A-CA-GGCCAAACCGAUU-GAGUGUUAUAGCCGG-
CAGG---CGU-UU-CUUGAUCGGGG--UAG------------UGGGAUC------CUCU-
AUGUGG--UUCUGCCGAACCACACGCGUA---------GUGCA-GG-------GGUAU-A
GGUG------AAU-GA-UUUU---------------------------------------
----GAACA-GUCAA-------CCGAAGAGGGUGAUAGUCCCGUA---------AUCGAA
A--UGCC------C--CGGUG----------CCGCG-AGAGG--AUAU----CCCAAGUA
GCACGGGCCCCGUGAAAUCCCGUGUGAA-UCUGUCAAG-ACC--ACUUGAUAAGCCUAAA
UA--CUA-CCAGAUAACCGAUAGU-GGAC-G-AGUACCGUGAGGGAAAG-GUGAAA-AGU
AC-CCCGA-GAGGGG-A-GUGAAAUAGUACCUGAAUCCAUUUGCUUACAA-ACCGU-CGG
A---GCAGUG---UG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------C-G--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------ACUUU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------UGU----
--------------CGCU--UGUGACGGCGUGCCUUUUGAAGAAUGAGCCUGCGAGUUAG
CG-AUGUGUGGCGA-GAUUAACCC----------GUUG---------GGGGUA--GUCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
---------------------AUUAGUCGCAUGUCCUA-GACCCGAAGCG-AAGUGAUCU
AUCCAUGGCCAGGCUGAAGCGAGGGUAAGA-CCUCGUGGAGGGCCGA--ACCCACUU-AG
GUUGAAAACUGAGGGGAUGAGCUGUGGAUCGGGGUGAAAGGCCAAUCAAACUUCG-UUAU
AGCUGGUUCUCUCCGAAAUGCAUUUAGGUGCAGCGUUGC-GUG-----------------
------------------------------------------------------------
-UUUC-UUGCCGGAGGUAGAGCUACUGGAUGGC-CAA--UGGGCCC---UA-CA--AGGU
UACUGACGUCAGCCAAACUCCGAAUGCCGGU-----------------------------
------------------------------------------------------------
----------------------AAGUUA-GA------GCGCAGC-AGUGAGG-C-UGCG-
G-GGGAUAAGCUUCGU-AGCCGAGAG-GGAAAC---AACCCAGACCACCGAUUAAGGUCC
CUAAGU--GU-GUG-CU-AA---GU-GGU-------AAAGGAUGUGGAGUUGCACAGACA
GCCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUGAAAGAGUGCGUAAUAGCUCACUGGUC
-----AAGUGAUUCUGCGCCGACAAUGUAAC-GGGGCUAA-AGCACAU----------CA
CCGAA-AUUGUGGCAUCGAUACACAU----------------------------------
-------------------------------------------AGG--------------
----------UAGGCUUUCGU---------------------------------------
---------------------------------------------AGUCCAGCCGUAUCG
AU-GGGUAGGAGAGC-GUCGUGU-G-G-CGAAA-GAAGCGG--C-GAUGUAAAUC-AG-C
CGUGGACGCU-ACA-CGAGUGAGAAUGC-AGGCAU-GAGUA-GCGAAA---GGC-GGGUG
A--A---------------AAACCC-GCCCCCCCGA-AUAACU-AAGGGUUCC-AGGGCC
AGGCUAAUCCGCCCUGGGUAAGUCGGG-AC-CUAAGGCGAGGCCG-A-G-AGGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGAC-AACGGGUU
-GAUA-UUCCCGUACCGGC----AAAG------AAC----------CGCCCAUAUUCCGC
GUAGUUUCGUUCAGCAUUUUGCUGUGCUUACGGUACCCCUUUUACGGUGUGCGGGAUAA-
----------------------------------GUGUUCAGGUGUGACGCAGGA-AGGU
AG-CCAAGCCGG-GC-G----AUGGU----UGACCCGGU-GUAAGU-GUGUA-----A-C
-----C------CG------------------GA-GGG-UAGG-----------------
---CAAAU-CCGCCCUCCAUCUAAAGGGCC----AGGCA-C-G-ACG--CG---------
------------------------------------------------------UA----
-GCGCUU---CGGCGCGAAA-UUGG-U-GAUCCUAUGCUGA-C-UAGAAA-AGCAUCGAC
ACA----------------------------------------------------AGGUU
C-UAGCUGCCCGUACCCCAAACCGACUCAGGUG-GUUAGGUA-GAGAAUACCAAGGG-G-
AUCGAG-AGAAUCGUG-GUUAAGGAACUCGGC-AAAAUGCCUCCGUAACUUCGG-GAGAA
GGAGGG--CCU-G-AG--GCGUGACGAGA----------CUAGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------UCUC-CUAGCGCUGCAG--GGUCAC
AGAAACCAGUGGGGAGCGA-----CUGUUUAUUAAAAACAUAGGUCUGUGCCAAGUCG--
--UA-A-------------GACGACGU-AUACAGACUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAGAGGACGGGUCA-GC-----UUUG-----GCGACGCUCGGAAUUUAAGCCC--
CGGUAAAC-GGCGGUGGUAACUAUAACCAUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCAACUGUCUCAACC----GCG-AA
CUCGGCGAAAUUGCACUACGAGUGAAGAUGCUCGUUACGCGUAGCAGGACGGAAAGA-CC
CCG-AGACC-UUUACUAUAGCUUGGUACUGGUACUUGGUGCGGUUUGUGUAGGAU-AGGU
GGGAGACUGUG---AAGCGGG-UGC----------------------------GCCA---
-----------------------------------GC-ACUCGUGGAGUC-GU-UGUUGA
AAUA-CCACU-CUGAUCGCCCCGGGUGUCUAACUUAGA--ACCG-U-AAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GU--------------------
--------------------------------------UCGAGGACA-AUGCCUGGUGGG
UAGUUUAACUGGGGCGGU-UGCCUCCCA-AAAGGUAAC-GGAGGCGCCCAAAGGUUCCCU
CAGCCUGGUCGGUAAUCAGGUGGC-GAGUG-UAAGUGCAC-AAGGGAGCUUGACU-GCGA
----------------------------------GACUGA---CGGGUCGAGCAGGGACG
AAA-GUCGGGACUAGUGAUCCGGC-----------AGU---GGCUU-GUG----------
----------GAAGCGCUGUCGCUCAACGG-AUAAAAGGUACCUCGGGG-AUAACAGGUU
GGUCCCUCCCAAGAGUCCAUAUCGACGGAGGGGUUCGACACCUCGAUGUCGGCUCGUCGC
AUCCUGGGGCUGUAGCAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGCU-----------------
---A-CGC--------------------------------------GCGU-CGGAAAUUU
GAGAGG-AGC-UGACCCUAGUACGAGAGGAC-CGGGUUGGACGAACCUC-UGGUG-UACC
AGUUGUCCUGCCAAGGGCAC-G-GCUGGUUUGCUACGUUCGGAACGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACCGGCCUCAA-G-AUGAGAUUUCC-AU---GCCCU------
-------------UU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------------UG
GGCG--AG-AGG----CUCCCAGUAGAACACUGGGU-UGAUAGGCU-CGAUGUGUACG-C
AG-G----------------GACU-----AAAGA-----------CCUGUUUAGCUU--A
CGAGUACUAAUA--GGCCGAU-U-GCUUGAAACA
>Vibrio_cholerae
G-GUUAAGUGAC--UAAGCGUACAC-GGUGGAUG-CCUGGGC-AGUCAG---AGGCGAUG
AAGGACGUAC-UAACUUGCGAUAAGCGCAGAUAAGGCAGUAAGAGCCGU----UUGAGU-
CUG-CGAUUUCCGAAUGGGGAAACCC---AA----CUGC-------------AUAA----
---------------G----C---AGUU-A-CUGU-UAA---CUGA--------------
------AUACA--------------------------UAG-GU-UAA-C-AG-AGCAAAC
CGGGGGAACUGAAACAUCUAAGUACCCC--GAGGAGAAGAAAUCAA-CCGAGAUUCCGGU
AGU-AG-CGGCGAGCGAACCUGGA-U-UA-GCCCU-------------------------
----------------------------------------------UAA------G----
CA------------------------CUC-----------GG---U-------GAAGU-A
GGUG------AAC-AA-GCUG---------------------------------------
----GAAAG-CUUGG-------CGAUACAGGGUGAUAGCCCCGUA---------ACCGAC
G--CUUC------A--UCGAG-----------CG----------UGAA----AUCGAGUA
GGGCGGGACACGUGAUAUCCUGUCUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUGACUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCUGUGAGGGG-A-GUGAAAUAGAACCUGAAACCGUGUACGUACAA-GCAGU-AGG
A---GCAC-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UUCGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAU
-A-UUCAGUGGCAA-GGUUAACC----------GUAUA----------GGGGA--GCCGU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAACU-------------------------GG-G-CGC
----------------------UCAGUCUCUGGAUAUA-GACCCGAAACC-GGGUGAUCU
AGCCAUGGGCAGGUUGAAGGUUGAGUAACA-UCAACUGGAGGACCGA--ACCGACUA-AU
GUUGAAAAAUUAGCGGAUGACUUGUGGCUAGGGGUGAAAGGCCAAUCAAACUCGG-AGAU
AGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGG-ACG-----------------
------------------------------------------------------------
-AAUA-CUACUGGGGGUAGAGC-ACUGUUAAGG-CUA--GGGGGUC---AUCCC--GACU
UACCAACCCUUUGCAAACUCCGAAUACCAGU-----------------------------
------------------------------------------------------------
----------------------AAGU-A-CU------AUCCGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGGAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CAAAGU---A-UUG-CU-AA---GU-GGG-------AAACGAUGUGGGAAGGCUCAGACA
GCUAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUAGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AGCAAUA----------CA
CCGAA-GCUGCGGCAAUGUCUU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------UUAGACA
UU-GGGUAGGGGAGC-GUUCUGU-AAG-CCGUU-GAAGGUG--A-AUCGUAAGGU--U-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-GAGUA-ACGACA--AAGG-GGGUG
A--A---------------AAACCU-CCU-CGCCGG-AAGACC-AAGGGUUCC-UGUCCA
ACGUUAAUCGGGGCAGGGUGAGUCGAC-CC-CUAAGGUGAGGCCG-A-A-AGGC----GU
A-----------------------------------------------------------
-------------------------------------AUC-GA-U--GGGA-AACGGGUU
-AAUA-UUCCCGUACUUCU----GACU------AUU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGGGGGACGGAGAA-GGCU
AG-GUGGGCCAG-GC-G----ACGGU----UGUCCUGGU-UCAAGU-GCGUA-----G-G
-----CU-----UG------------------AG-AGU-UAGG-----------------
---UAAAU-CCGGCUCUCU--CUAAGGCUG----AGACA-C-G-ACG--UC---------
------------------------------------------------------GA----
-GCUAC-UACGGUAGUGAAG-UCAU-U-GAUGCCAUGCUUC-C-AGGAAA-AGCCUCUAA
GCUU--------------------------------------------------CAGAUA
G-UCAGGAAUCGUACCCCAAACCGACACAGGUG-GUCGGGUA-GAGAAUACCAAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AAAAUGGUACCGUAACUUCGG-GAGAA
GGUACG-CUCU-U-GA--UGGUGAAGUCC----------CUCGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------GGAU-GGAGCUGACGAG--AGUCGC
AGAUACCAGGUGGCUGCAA-----CUGUUUAUUAAAAACACAGCACUGUGCAAAAUCG--
--CA-A-------------GAUGACGU-AUACGGUGUGA-CGCCUGCCCGGUGCCG-G-A
AGGUUAAUUGAUGGGGUUA-GC-----GCAA-----GCGAAGCUCUUGAUCGAAGCCC--
CGGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGAUG--GCCACGCUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAAAUCGCUGUGAAGAUGCAGUGUACCCGCGGCUAGACGGAAAGA-CC
CCGUGAACC-UUUACUACAGCUUGGCACUGAACAUUGAACCUACAUGUGUAGGAU-AGGU
GGGAGGCUAUG---AAGACGU-GAC----------------------------GCCA---
-----------------------------------GU-UGCGUUGGAGCC-GU-CCUUGA
AAUA-CCACC-CUUGUAUGUUUGAUGUUCUAACUUAGA--CCCA-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GG--------------------
--------------------------------------UUGAGGACA-GUGCCUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGAGUAAC-GGAGGAGCACGAAGGUGGGCU
AAUCACGGUUGGACAUCGUGAGGU-UAGUG-CAAUGGCAU-AAGCCCGCUUAACU-GCGA
----------------------------------GAAUGA---CGGUUCGAGCAGGUGCG
AAA-GCAGGUCAUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGUCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UGGAAGAUU
GAAGGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAACCUC-UGGUG-UUCG
GGUUGUGUCGCCAGACGCAU-U-GCCCGGUAGCUAAGUUCGGAAUUGAUAAGCGCUGAAA
GCA-UC--UAAGCGCGAAGCGAGCCCUGA-G-AUGAGUCUUCC-CU---GACAG------
-------------UU--------UAA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------CUG
UCCU--AA-AGG----GUUGUUCGAGACUAGAACGU-UGAUAGGCA-GGGUGUGUAAG-C
GU-U----------------GU----------GA-----------GGCGUUGAGCUA--A
CCUGUACUAAUU--GCCCGUGAG-GCUUAACCAU
>Wolbachia_endosymbiont
UAAAUAAAUUAU--UAAGAGCACUU-GAUGGAUG-CCUUGGC-GUUAAG---AGGCGAUG
AAGGACGUGG-CAGGCUGCGAUAAGCUGCGGGGAAUUGUCAACAGGUUU-----UGAUC-
CGC-AGAUUUCCGAAUGGGGAAACCC---AA----CUAGU-------------UGA----
----------G----C----U---AGUU-A-UUGC-AUG---UU----------------
------AGAUU----------------------------A-AU-AUG-U-AA-AGCGAAC
UUGGUGAACUGAAAUAUCUAAGUAGCCA--AAGGAAAAGAAAUCAA-CCGAGAUUCUGUU
AGU-AG-UGACGAGCGAAAGCGGG-A-AA-GGCUA-------------------------
----------------------------------------------GUG------G----
UU------------------------UAA-----------GA---A-------UAAGA-A
UUAG------AAU-AC-UCUG---------------------------------------
----GAAAG-AGUAA-------CCAUAGAAGGUGAUAGUCCUGUA---------UAGGUA
G--AAAG------U--UUUUA-----------------------AAUC----CUCGAGUA
GAGCGGGGCACGUGAAAUCCUGUUUGAA-CAUGGGGGG-ACC--AUCCUCCAAGCCUAAA
UA--CUC-CUUGACGACCGAUAGU-GAAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-GAGGGG-A-GUGAAAUAGAAUCUGAAAUCGAGUGCUUACAA-ACAGU-UGG
A---GCUU-U---AU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------GU-UUUUGCU--A--------------------U------GG-GA---
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------------------
-----------UCUUG--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------U-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------AGCUAAUUU----
--------------AUAG--AGUGACAGCGUACCUUUUGCAUAAUGGGUCAGCGAGUUAA
-U-CUAUAAAGCAA-GCUUAAGCC----------GUUA---------GGUAUA--GGCAU
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------UG-G-CGU
---------------------UUUAGUUUUAUGGAUUA-GACCCGAAACC-AAGUGAUCU
AGUCAUGACCAGAUUGAAGGUGUGGUAAAA-CACACUGGAGGAUCGA--ACCAGUUA-AU
GUUGCAACAUUAUUGGAUGAGUUGUGAUUAGGGGUGAAAGGCCAAUCAAACUUGG-AAAU
AGCUGGUUCUCCGCGAAAUCUAUUUAGGUAGAGCGUUGU-AUG-----------------
------------------------------------------------------------
-UAUG-UUGUUGGGGGUAGAGC-ACUUGAUAGA-CUA--GGGGGGC---UCACU--GUCU
UACCAAAUCUAACUAAACUCCGAAUACCAAU-----------------------------
------------------------------------------------------------
----------------------AAUUGA-UU------AUACAGC-AGACACA-C-UGCG-
G-GUGCUAA-GUCCGU-GGUGGAAAG-GGAAAC---AGCCCAGAUUACUAUCUAAGGUCC
CAAAAU--UA-CAG-CU-AA---GU-GGG-------GAAGGAAGUAGAAAAACCAUUACA
GCUAGGAGGUUGGCUUGGAAGCAGCUA-UCCUUUAAAGAAAGCGUAACAGCUCACUUGUC
UAAAUAAGUUUUUCUGCGCUGAAAAUGUACC-GGGGCUAA-AGCUGUA----------UA
CCGAA-GAUGUAGGUACUUAUU--------------------------------------
------------------------------------------------------------
-------------GAUUG------------------------------------------
-------------------------------------------------CAGUUAAUAAG
UG-CGGUAGCGGAGC-GUUCUGU-AAA-UCUGU-GAAGGUA--G-UUUGUAAAAA--C-U
GCUGGAGAUA-UCA-GAAGUGAGAAUGC-UGACAU-AAGUA-GCGUAA--AAGA-GUGUG
A--A---------------AAACAC-UCU-CACCAA-AAAUCU-AAGGGUUCC-UACGUU
AAGUUAAUCUGCGUAGGGUUAGUCGGU-UC-CUAAGGCAAGUCCGUA-A-AGGA----GU
A-----------------------------------------------------------
-------------------------------------GUU-GA-U--GGCA-AUCAGGUU
-AAUA-UUCCUGAACCUCU----UA-----------------------------------
------------------------------------------------------------
-----------------------------------------AGUGUGACGGGUUU-UGUA
-U-UUGUAUAGG-UC-U----UAUUG----GAUUGACCU-AUG-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CUUA-A----AAA-AAGCUC-C-AGGAAAUAGCACUUAU
AUU---------------------------------------------------------
--UAUGAGGCCGUACCGUAAACCGACACUGGUG-GAUGAGUA-GAGUAUACUAAGGU-G-
-UUGAA-AGAAUGAUG-UUGAAGGAACUCGGC-AAAUUGUACCUGUAACUUCGG-AAGAA
GGGUAA-CCUG-C-UU--UUAGG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------CAACUAUAAGUA--GGUGGC
ACAAAAUAGGGAGUAGUGA-----CUGUUUACUAAAAACACAGGACUCUGCAAACACG--
--UA-A-------------GUGGAAGU-AUAGGGUCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAUAAGAGGGGU----------GUAA----------GCUCUAAAUUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACACUGACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCCGCACGAAUGGCGUAACAAUU--UCUCCACUGUCUCCAAC----AUC-AA
UUCAGCGAAAUUGAAUUCCCCGUGCAGAUGCGGGGUACCCGCGGUUAGACGAAGAGA-CC
CCGUGCACC-UUUACUAUAGCUUUACAUUGGUAUUAAAAAUGUGAUGUGCAGAAU-AGGU
GGGAGACUUUG---AAGUUAU-GGC----------------------------GCUA---
-----------------------------------GC-UAUAAUGGAGUC-AA-CCUUGA
GAUA-CCACC-CUUUACACUUUUGAUACCUAACUAUGU--UUCA-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----AA--------------------
--------------------------------------ACUAGGACA-UUGUAUGGUGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAGAGUAAC-GGAGGCGUGCGAAGGUAAGCU
AGAGCUGGUCGGAAAUCAGCUUGA-UAGUA-UAAUGGCAU-AAGCUUGCCUGACU-GCGA
----------------------------------GGCUGA---CAAGCCAAGCAGAGACG
AAA-GUCGGUCAUAGUGAUCCGGU-----------GAU---UCUGU-AUG----------
----------GAAGGGUCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUGGUGUUCAAGAGUUCAUAUCGACGACACCGUUUGGCACCUCGAUGUCGACUCAUCAC
AUCCUGGGGCUGAAGAAGGUCCCAAGGGUUCGGCUGUUCGCCGAUUAAAGUGAUACGUGA
GUUGGGUUUAGAACGUCGUGAGACAGUUCGGUUUCUAUCUGCC-----------------
---G-UGG--------------------------------------GUGA-AGGAAAUUU
GAGAAG-AUC-UGACUCUAGUACGAGAGGAC-CGAGAUGGAUAUACCUC-UGGUG-UACC
AGCUGUUAUGCCAAUAGCAU-U-GCUGGGUAGCUAUGUAUAGGUGGGAUAAUUGCUGAAA
GCA-UA--UAAGCAAGAAACCCUCUUCAA-A-A--AGAUUUCC-CA---A----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UU-AAG----GCCGUGGAAGACUACCACGU-UGAUAGGCU-AGGUGUGGAAG-C
AU-G----------------GU----------AA-----------CGUGUGGAGCUA--A
CUAGUACUAAUA--GCCUGAUUG-AUUUAUUUGU
>Xanthomonas_axonopodis
G-GUCAAGCGAA--UAAGCGCACAC-GGUGGAUG-CCUAGGC-GGUCAG---AGGCGAUG
AAGGACGUGG-UAGCCUGCGAAAAGUGUCGGGGAGCUGGCAACAAGCUU-----UGAUC-
CGG-CAAUAUCCGAAUGGGGAAACCC---AC----UGC--------------UUCG----
--------------------G---CAGU-A-UCCU-GCA---GUGA--------------
------AUUCA--------------------------UAG-CU-GCU-G-GA-AGCGAAC
CCGGUGAACUGAAAUAUCUAAGUAACCG--GAGGAAAAGAAAUCAA-CCGAGAUUCCCUA
AGU-AG-UGACGAGCGAACGGGGA-G-CA-GCCCU-------------------------
----------------------------------------------UAA------G----
CU------------------------GGA-----------AU---G-------GCUUU-A
GAAA------AAC-AA-UCUG---------------------------------------
----GAAAG-AUUGG-------CCAUAGAAGGUGAUAGCCCUGUA---------UUUAAA
A--GGGC------C--ACUCC-----------AG----------UGAA----GACGAGUA
GGGCGGGGCACGUGAAACCCUGUCUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUGACCGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGGAGAGGGG-A-GUGAAAUAGAUCCUGAAACCGUGUGCGUACAA-GCAGU-AGG
A---GCUC----------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------G--AGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAC
-U-GUUCGUGGCAA-GCUUAACC----------GUAUA----------GGGGA--GGCGA
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAUAA-------------------------GG-G-CGC
----------------------AUAGUCGCGGGCAGUA-GACCCGAAACC-GGGUGAUCU
AGUCAUGGCCAGGGUGAAGGUGCCGUAACA-GGUACUGGAGGCCCGA--ACCCACGU-CU
GUUGCAAAAGACGGGGAUGAGCUGUGAUUAGGAGUGAAAAGCUAAUCGAACCCGG-AGAU
AGCUGGUUCUCCUCGAAAGCUAUUUAGGUAGCGCCUCAU-AUG-----------------
------------------------------------------------------------
-UAUC-CUCUCGGGGGUAGAGC-ACUGUUAUGG-CUA--GGGGGUC---AUCGC--GACU
UACCAAACCAUUGCAAACUCCGAAUACCGAG-----------------------------
------------------------------------------------------------
----------------------ACGG-A-CU------GUAUGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAAAG-GGAAAC---AACCCAGACCCACAGCUAAGGUCC
CAAAUU--CA-CUG-CU-AA---GU-GGA-------AAACGAUGUGGAAAGGCAUAGACA
GCCAGGAGGUUGGCUUAGAAGCAGCCA-CCCUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUCGGUCUGCGCGGAAGAUUUAAC-GGGGCU-A-AGCAGUG----------AA
CCGAA-GCUUGGGGUGCAUAAA--------------------------------------
------------------------------------------------------------
--------------ACGU------------------------------------------
----------------------------------------------------GUUUUAUG
CG-CGGUAGAGGAGC-GUUCCGU-AAG-CCUGC-GAAGGUG--G-AUUGAGAAGU--C-U
GCUGGAGGUA-UCG-GAAGUGCGAAUGC-UGACAU-GAGUA-ACGAUA--AUGC-GGGUG
A--A---------------AAGCCC-GCA-CGCCGA-AAGCCC-AAGGUUUCCUUGCGCA
ACGUUAAUCGACGCAGGGUUAGUCGGU-CC-CUAAGGCGAGGGCG-A-A-AGCC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AGCAGGUU
-AAUA-UUCCUGCACCUCG----CGUG------AGU------------------------
------------------------------------------------------------
------------------------------------GCGAUGGAGGGACGGAGAA-GGUU
AG-GUGUACCGG-GC-G----UUGGU----UGUCCCGGG-GAAAGG-CGGUA-----G-G
-----UU-----UG------------------GA-UCU-UUGG-----------------
---CAAAU-CCGGGAUCCU--UUAAGACCG----AGCAC-C-G-AG---AC---------
------------------------------------------------------GA----
-GCCUU----UUUGGCGAAG-UCAC-U-GAUACCACGCUUC-C-AGGAAA-AGCUCCUAA
GCUU---------------------------------------------------CAGCU
C-ACGAAGACCGUACCGUAAACCGACACAGGUG-GGUAGGAU-GAGAAUUCUCAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AACAUGGCACCGUAACUUCGG-GAGAA
GGUGCA-CCCU-U-UU--UGGUG--GCUC-----------AUGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------GAGCUAUAGCUGAAGAG--GGUCGC
AGAAACCAGGCCGCUGCGA-----CUGUUUAUCAAAAACACAGCACUCUGCAAACACG--
--AA-A-------------GUGGACGU-AUAGGGUGUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAUUGAUGGGGUCA-GCC----GCAA----GGCGAAGCUCUUGAUCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACA--GCGGCGCUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAAAUCGCUGUGAAGAUGCAGCGUUCCCGUGGCAAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUUACACUGAACGUUGAGUUCGUCUGUGUAGGAU-AGGU
GGGAGGCUAUG---AAACUGU-GGC----------------------------GCUA---
-----------------------------------GC-UGCAGUGGAGCC-AU-CCUUGA
AAUA-CCACC-CUGUCGUGCUUGACGUUCUAACCUAGG--UCCG-U-UAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------CG----GA--------------------
--------------------------------------UCAGGGACC-GUGUAUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCUA-AAGAGUAAC-GGAGGAGCACGAAGGUACGCU
CAGCGCGGUCGGACAUCGCGCACU-GUGUG-CAAAGGCAU-AAGCGUGCUUGACU-GCAA
----------------------------------GAUCGA---CGGAUCAAGCAGGUACG
AAA-GUAGGUCUUAGUGAUCCGGU-----------GGU---UCUGU-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGUAGUCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---A-UGG--------------------------------------GCGU-UGGAAGUUU
GAGAGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAACCUC-UGGUG-UUCC
GGUUGUCACGCCAGUGGCAU-U-GCCGGGUAGCUAUGUUCGGAAGCGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCGCGCCUCAA-G-AUGAGACUUCC-CG---GGGCA------
-----------------------CAA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GCC
CCCU--AA-AGG----AACCAUGUAGACUACGUGGU-UGAUAGGUC-AGGUGUGUAAG-U
AC-A----------------GC----------AA-----------UGUAUUGAGCUA--A
CUGAUACUAAUG--AUCCGUGCG-GCUUGACCAU
>Yersinia_pestis
G-GUUAAGCGAC--UAAGCGUACAC-GGUGGAUG-CCUAGGC-AGUCAG---AGGCGAUG
AAGGGCGUGC-UAAUCUGCGAAAAGCGUCGGUAAGCUGAUAUGAAGCGU----UAUAAC-
CGA-CGAUACCCGAAUGGGGAAACCC---AG----UGCAA------------UACG----
----------U----U----G---CACU-A-UCGU-UAG---AUGA--------------
------AUACA--------------------------UAG-UC-UAA-C-GA-GGCGAAC
CGGGGGAACUGAAACAUCUAAGUACCCC--GAGGAAAAGAAAUCAA-CCGAGAUUCCCCC
AGU-AG-CGGCGAGCGAACGGGGA-G-GA-GCCCA-------------------------
----------------------------------------------GAG------U----
CUGAAU------------------CAGUU-----------UG---U-------GUGUU-A
GUGG------AAG-CG-UCUG---------------------------------------
----GAAAG-UCGCA-------CGGUACAGGGUGAUAGUCCCGUA---------CACCAA
A--AUGC------A--CAGGC-----------UGU-----GA--ACUC----GAUGAGUA
GGGCGGGACACGUGACAUCCUGUCUGAA-UAUGGGGGG-ACC--AUCCUCCAAGGCUAAA
UA--CUC-CUGACUGACCGAUAGU-GAAC-C-AGUACCGUGAGGGAAAG-GCGAAA-AGA
AC-CCCGGCGAGGGG-A-GUGAAAUAGAACCUGAAACCGUGUACGUACAA-GCAGU-GGG
A---GCAC-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UUCGU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--UGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAU
-A-UUUUGUAGCAA-GGUUAACC----------GAAUA----------GGGGA--GCCGU
AGGGAAAC-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------UAACU-------------------------GG-G-CGU
----------------------CUAGUUGCAAGGUAUA-GACCCGAAACC-CGGUGAUCU
AGCCAUGGGCAGGUUGAAGGUUGGGUAACA-CUAACUGGAGGACCGA--ACCGACUA-AU
GUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG-AGAU
AGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGU-GAA-----------------
------------------------------------------------------------
-CUCA-UCUUCGGGGGUAGAGC-ACUGUUUCGG-CUA--GGGGGCC---AUCCC--GGCU
UACCAAACCGAUGCAAACUCCGAAUACCGAA-----------------------------
------------------------------------------------------------
----------------------GAAU-GUUA------UCACGGG-AGACACA-C-GGCG-
G-GUGCUAACGUCCGU-CGUGAAGAG-GGAAAC---AACCCAGACCGCCAGCUAAGGUCC
CAAAGU--CA-UGG-UU-AA---GU-GGG-------AAACGAUGUGGGAAGGCACAGACA
GCCAGGAUGUUGGCUUAGAAGCAGCCA-UCAUUUAAAGAAAGCGUAAUAGCUCACUGGUC
-----GAGUCGGCCUGCGCGGAAGAUGUAAC-GGGGCU-A-AACCAUG----------CA
CCGAA-GCUGCGGCAGCGACAC--------------------------------------
------------------------------------------------------------
--------------UU--------------------------------------------
----------------------------------------------------AGGUGUUG
UU-GGGUAGGGGAGC-GUUCUGU-AAG-CCGUU-GAAGGUG--A-CCUGUGAGGG--U-U
GCUGGAGGUA-UCA-GAAGUGCGAAUGC-UGACAU-AAGUA-ACGAUA--AUGC-GGGUG
A--A---------------AAACCC-GCA-CGCCGG-AAGACC-AAGGGUUCC-UGUCCA
ACGUUAAUCGGGGCAGGGUGAGUCGAC-CC-CUAAGGCGAGGCUG-A-A-AAGC----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACUUGG----UGUU------ACU------------------------
------------------------------------------------------------
------------------------------------GCGAAGGGGGGACGGAGAA-GGCU
AG-GCUGGCCGG-GC-G----ACGGU----UGUCCCGGU-UUAA-GCGUGUA-----G-G
-----GG-----GA------------------GU-GAC-CAGG-----------------
---UAAAU-CCGGUUGCUU-AUCAACCCUG----AGGCG-U-G-AUG--AC---------
------------------------------------------------------GA----
-UGCAC-CACGGUGCAGAAG-CAGU-U-GAUGCCAUGCUUC-C-AGGAAA-AGCCUCUAA
GCAU--------------------------------------------------CAGGUA
A-CAUUAAAUCGUACCCCAAACCGACACAGGUG-GUCAGGUA-GAGAAUACUCAGGC-G-
CUUGAG-AGAACUCGG-GUGAAGGAACUAGGC-AAAAUGGUGCCGUAACUUCGG-GAGAA
GGCACG-CUGG-C-GU-UAGGUGAAAGGA----------CUAGC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------UCCU-GGAGCUGAAGCC--AGUCGC
AGAUACCAGCUGGCUGCAA-----CUGUUUAAUAAAAACACAGCACUGUGCAAACACG--
--AA-A-------------GUGGACGU-AUACGGUGUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAUUGAUGGGGUCA-GCC----GCAA----GGGGAAGCUCUUGAUCGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAAUGAUG--GCCAGGCUGUCUCCACC----CGA-GA
CUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGA-CC
CCGUGAACC-UUUACUAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAU-AGGU
GGGAGGCCUUG---AAGUGUG-GAC----------------------------GCCA---
-----------------------------------GU-CUGCAUGGAGCC-AA-CCUUGA
AAUA-CCACC-CUUUAAUGUUUGAUGUUCUAACUCGGC--CCCA-U-GAUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GG--------------------
--------------------------------------GUGAGGACA-GUGUCUGGUGGG
UAGUUUGACUGGGGCGGU-CUCCUCCCA-AAGAGUAAC-GGAGGAGCACGAAGGUUAGCU
AAUCACGGUCGGACAUCGUGAGGU-UAGUG-CAAAGGCAU-AAGCUAGCUUGACU-GCGA
----------------------------------GAGUGA---CGGCUCGAGCAGGUACG
AAA-GUAGGUCUUAGUGAUCCGGU-----------GGU---UCUGA-AUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACUCCGGGG-AUAACAGGCU
GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGA
GCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-UGGAAGAUU
GAGAGG-GGC-UGCUCCUAGUACGAGAGGAC-CGGAGUGGACGAAUCAC-UGGUG-UUCG
GGUUGUCAUGCCAAUGGCAU-U-GCCCGGUAGCUAAAUUCGGAAGAGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAACUUGCCUCGA-G-AUGAGUCUUCC-CU---GGGAC------
-------------UU--------AAA----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GUC
CCCU--GA-AGG----AACGUUAAAGACUAUGACGU-UGAUAGGCU-GGGUGUGUAAG-U
GC-A----------------GC----------GA-----------UGUAUUGAGCUA--A
CCAGUACUAAUG--AUCCGUGAG-GCUUAACCUU
>Zymomonas_mobilis
A---------GG--UAAGAGCAUUU-GGUGGAUG-CCUAGGC-AUACAC---AGGCGAUG
AAGGACGUGG-CACGCUGCGAUAAGCUACGGCGAGAUGUGAGCAAUCUU-----UGACC-
CGU-AGAUUUCCGAAUGGGGAAACCC---AU----CCUCA-CCAUUUA-----AGU----
UAGGUGG---G----A----A---GGAU-A-UUAC-CAA---AGUGA-------------
------AUACA-------------------------UAGC-UU-UGG-U-GA-AGCGAAC
CCGGCGAACUGAAACAUCUAAGUACCCG--GAGGAAAAGACAUCAA-CCGAGAUUCCGUU
AGU-AG-UGGCGAGCGAACGCGGA-G-UA-GGCCA-------------------------
----------------------------------------------GUA------C----
CU------------------------UUG-----------AU---U-------GCGUU-A
GCAG------AAG-UC-UUUG---------------------------------------
----GAAAG-AGACA-------CCAUAGUGGGUGACAGUCCCGUA---------UGUUAA
A--ACAA------U--AUUGA-----------------------AGGU----CUUGAGUA
GGGCGGGGCACGUGAAACCUUGUCUGAA-CAUGGGGGG-ACC--ACCCUCCAAGCCUAAA
UA--CUC-GUGUAUGACCGAUAGU-GAAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCGAUUAGGGG-A-GUGAAACAGUUCCUGAAACCGAAUGCUUACAA-GCAGU-AGG
A---GGGU-C--------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------UUUAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------GG--CCUGACUGCGUACCUCUUGCAUAAUGGGUCUGUGACUUAA
-U-GUAUCAAGCAA-GCUUAAGCC----------GAUA---------GGUGUA--GGCGC
AGCGAAAG-C--------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGUCU--------------
----------------------GAAUA-------------------------GG-G-CGA
---------------------UUUAGUUUGAUGCAUUA-GACCCGAAACC-CGGCGAUCU
AGGCAUGGUCAGGAUGAAGGUAAGGUAACA-CUUACUGGAGGUCCGA--ACCGAUUA-AC
GUUGAAAAGUUAUCGGAUGAACUGUGUUUAGGGGUGAAAGGCCAAUCAAGCCGGG-AAAU
AGCUGGUUCUCCGCGAAAACUAUUGAGGUAGUGCCUCAU-GUG-----------------
------------------------------------------------------------
-AUGA-CCGUUGGGGGUAGAGC-ACUGGAUGGA-UGC--GGGGGUU---UC-GC--GACC
UACCAAAUCUAACCAAACUCCGAAUACCAAC-----------------------------
------------------------------------------------------------
----------------------GAGU-U-UA------ACAUGGG-AGACAGA-C-GGCG-
G-GUGCUAAGGUCCGU-CGUCGAGAG-GGAAAC---AGCCCUGACCUACAGCUAAGGUCC
CCAAGU--CA-UGU-CU-AA---GU-GGG-------AAAGCUUGUGAAGACCCCAAAACA
ACCAGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAAAGCGUAACAGCUCACUGGUC
UAAAUAAGGGUCUUUGCGGCGAAGAUGUAAC-GGGGCUCA-AGACAUG----------CA
CCGAA-GCUUAGGAUUGUUACA--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------UUAGUAAC
AG-UGGUAGCGGAGC-GUUCCGU-AAG-CCUGU-GAAGCAG--U-CUGGUAAUGG--A-C
UGUGGAGGUA-UCG-GAAGUGCGAAUGC-AGACAU-GAGUA-GCGAUA--AAUA-GGGUG
A--G---------------AUGCCC-UAU-CGCCGA-AAGUCC-AAGGGUUCC-UGCGCA
AGGCUAAUCCGCGCAGGGUGAGUCGGC-CC-CUAAGACGAGCCCG-A-A-GGGG----GU
A-----------------------------------------------------------
-------------------------------------GUC-GA-U--GGGA-AACAGGUU
-AAUA-UUCCUGUACCUGG----AGA----------------------------------
------------------------------------------------------------
-----------------------------------------GAUGUGACGGAUCG-UGUA
-A-AUUGUAUGU-CC-U----UAUCG----GAUUGGACA-UG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------CUCA-U----AAG-CGGUUC-C-AGGAAAUAGCCUCUCC
------------------------------------------------------------
--AUAUAGACCGUACCCUAAACCGACACAGGUG-GACAGGUA-GAGUAUACCAAGGC-G-
CUUGAG-AGAAGGGUG-UUGAAGGAACUCGGC-AAAUUGCCUCCGUACCUUCGG-AAGAA
GGAGGC-CCUU-A-UU--AUAGG-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------CAACUAUUCUAA--GGGGGC
ACAGGCCAGGGGGUAGCGA-----CUGUUUAGCAAAAACACAGGGCUCUGCAAAGUCGGC
UUCA-A-------------GACGACGU-AUAGGGCCUGA-CGCCUGCCCGGUGCUG-G-A
AGGUUAAGUGGAGGAGU----------GCAA----------GCUCUGAAAUGAAGCCC--
CAGUAAAC-GGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCACGAAUGGCGUAACGACU--UCCCCACUGUCUCCAAC----ACC-UG
CUCAGCGAAAUUGAAUUCUCCGUGAAGAUGCGGAGUACCCGCGGUUAGACGGAAAGA-CC
CCGUGCACC-UUUACUGCAGCUUCAGAGUGGCAUUAGGAAAGAACUGUGUAGCAU-AGGU
GGGAGGCUUUG---AAACUUG-AGC----------------------------GCCA---
-----------------------------------GC-UUGAGUGGAGCC-AU-AGGUGA
AAUA-CCACC-CUGUUGUUUUCUGAUGUCUAACCUAGA--ACCA-UGAAAC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------UG----GU--------------------
--------------------------------------UCAGGGACC-CUCUGUGGCGGG
UAGUUUGACUGGGGCGGU-CGCCUCCUA-AAGAGUAAC-GGAGGCGCGCGAUGGUUGGCU
CAGGCCGGUUGGAAACCGGCUGCAAGAGUG-CAAUGGCAU-AAGCCAGCCUGACU-GUGA
----------------------------------GACUGA---CAAGUCGAACAGAGACG
AAA-GUCGGUCAUAGUGAUCCGGU-----------GGU---CCCUC-GUG----------
----------GAAGGGCCAUCGCUCAACGG-AUAAAAGGUACGCCGGGG-AUAACAGGCU
GAUAACCCCCAAGAGCUCAUAUCGACGGGGUUGUUUGGCACCUCGAUGUCGGCUCAUCAC
AUCCUGGGGCUGGAGCAGGUCCCAAGGGUUUGGCUGUUCGCCAAUUAAAGUGGUACGUGA
GCUGGGUUCAGAACGUCGCGAGACAGUUUGGUCCCUAUCUGCC-----------------
---G-UGG--------------------------------------GCGU-C-GAUAUUU
GAGAGG-AGU-UGCCCUUAGUACGAAAGGAC-CGGGGUGAACAUGCCUC-UGGUG-GACC
UGUCGUGGCGCCAGCCGCGC-A-GCAGGGUAGCUAUGCAUGGACGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAGCCUCCCUCAA-G-AUAAGAUAUCU-C---------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------AGA----GCCGUCGAAGACUACGACGU-UGAUAGGCC-AGAUGUGGAAG-U
GU-G----------------GU----------AA-----------CACAUGUAGCUA--A
CUGGUCCUAAUU--GCUCUAUUC-ACGCUUUUG-
>Aeropyrum_pernix
-------GGCAC--CUAUGCCGCCC-GGGGGAUG-GCUCGGC-UCGG-G---CGCCGAGG
AAGGGCGUGG-CAAGCUGCGAUAAGCCCGGGGUAGGCGCAGGCAGCCGU-----CGAAC-
CCG-GGAUCCCCGAAUGGGACU-UCCC--GC----UGCGG-GCG---------AAG----
----AGC---C----C----G---CAGC-G-CCCC-C-----------------------
------GUUU-----------------------------------GG-G-GG-CGGGAAC
CCCCCGAAAGGAAGCAUCUGAGUAGAGG--GAGGAGAAGAAACCAA-CAGGGAUCCCCUG
AGU-AG-GGGCGACCGAAAGGGGG-A-GA-GCCCAAACCAAUCCCCCACGGGA-------
GGAC---CGU-GGGGGGAUGAGGGG--UUG-------C-GG--CCCUGCG-----G----
--CUGGGGCUUCGAGCCCCGGCGGGCCGA-----------CC--CA-------CGGUA--
GCCG------AAGUGG-GCUG---------------------------------------
----GAAUG-CCCCG-------CCGUAGAGGGUGAUAGCCCCGUA---------GGC---
G--AAAC------CGUGGGGG-CCC-----------------GUGCCGCAGGGCAGAGUA
CCACGGCUUG---GUAUUGCCGUGGGAA-GCUGGGAGGAACC--GACUUCCAAGGCUAAA
UA--CGU-C-CCGAGACCGAUAGC-GAAC-UAAGUACCGUGAGGGAAAG-CUGAAA-AGA
AC-CCCGG-GAGGGG-G-GUG-AAAAGAGCCUGAAACCGGGCGGCGACAU-AC-GG-UGC
G---ACCCGAAA-GGGGUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AA-ACCCCC---G-------------------AA------GG-AA---
---A------CC------------------CGG---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------C-CG------GG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGGGAU-GG----
-------------ACCGG--GGUCGCACCGUCCGUCUUGAAACACGGGCCGGGGAGUUCA
-C-GGCCGUGGCGA-GCUUAAGGGG--------GUCAA--------CCCCGUA--GGCGC
AGGGAAAC-CGACAG----------------------GCCCG-CAGCCGGG---------
-----------------------------------------GG--CGACCCCGG------
------------------------------CGA-GGGGCG-GGGUCC-------------
----------------------UAAUA-------------------------GG-G-CCC
----------------------GGAGUCACGGCCGUGA-GACCAGAAACC-GGGCGAUCU
AGGCGGGGGCAGGGCGAAGCCGGGGGAAAC-CCCGGUGGAGGCCCGC--AAGGGUGCUGA
CGUGCAAAUCGCUCCCCUGACCCCCGUCUAGGGGUGAAAGGCCAAUCUAGCCCGGAAGAU
AGCUGGUUCCCGCCGAAGUGGCUCGCAGGCCAGCCCCGC-CGGA----------------
------------------------------------------------------------
-GGCCGGGCCGUGGGGUAGAGCUACUGAUUGGG-CGUG-CAGGGGG-C-GUAAA-GCCC-
C-CGGCGCCCAGUCAAACUCCGAACCUGCGG-----------------------------
------------------------------------------------------------
----------------------C-CG-C--CG-UAGAUGGCGGG-AGUGGGGUU-CCCC-
G-GGG-UAAGCCCGGG-GGCCGAGAG-GGGAAC---AACCCAGACCGG-GGUUAAGGCCC
CUAAGU--GC-CGG-CU-AA---GU-GCCAAG--CCAAAGGGCGUCCCCCGCCUAAGACA
GCGGGGAGGUGGGCCUAACAGCAGCCA-UCCUCUAAGGAGUGCGUAACAGCUCACCCGCC
-----GAGGCGGGGGGCCCCGAAGAUUGGUC-GGGGCUUA-AGCCGGC----------CG
CCGAG-ACCCCGGGCCGCGGCU--------------------------------------
------------------------------------------------------------
--------------CCGAUG----------------------------------------
----------------------------------------------------GAGCCGCG
UG-CGGUAGGCGGGC-GUCGGGG-U-G-GCGUA-GAAGCCG--G-GCCGCGAGGU--C-C
GGUGGAGCCG-CCC-CGAGCGCGGAUCC-CGGCGG-UAGUA-ACAGCG-AAGCG-GGGUG
A--G---------------AAUCCC-CGC-CGCCGGAAAGGGC-AAGGGUUCC-CCGGCA
AUGGUCGUCAGCCGGGGGUCAGCCGG--UC-CUAACCGGGACCGU-AAC-ACGG---AUC
C-----------------------------------------------------------
-------------------------------------CGG-GA-A-GGGGA-AACGGGUU
-AACA-UUCCCGUGCCGCG----GGGG------UAC----------GCUUC---------
-----------------------------------------------GCGG--CAAC---
------GC-AA-GGC--------------------CCCA-CCCCC-GACGCCUCGGGGUA
GG-CGGACCGGG-GG-CCCCC-UUAGGGGGGCGACCCGGCUAAC-C-UGCCG-----A-A
-----GG-----CC----------------GGGG-AGU-G-CC-----------------
---GUAAC-GGCGAGAACC-----GGCCGA----AGGGG-GGA-AUG--GC---------
------------------------------------------------------------
-CCGCC-----UAUGGCGGU-UCCG-C-C-GACCCCUGGACCC-UUGAAA-A-GGGGGUG
GGGAA--------------------------------------------------GGAUC
C-CCCGCGCCCGUACCGAGAACCGACACAGGUGCCCCUGGGU-GAGCAGCCCAAGGC-GU
CUGGGGGCUAACCCGG-GCCAGGGAACUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUG-C-GG--UCCU------GGGGCUCGAACCCU------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GGGACCGCA--GGUCGC
AGUGCCUAGGGGGGCCUGA-----CUGUUUAACAAAAACAUAGCUCCCCGCUAGCCCG--
--AA-A-------------GGGUGUGU-ACGGGGGGUGA-GCCCUGGCCACUGGCG-G-U
CCGUGAAACCGGGG-------------UACA-------------ACCCGGCGAAGCGC--
CGCUGAAG-GCCGGGAGUAACCCUGACUCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UA
AGUUCCGGCGCGCAUGAACGGGUCAACGAGG--UCCCCACUGUCCUGGCC----CGG-GG
CCCCGUGAACCCCCUGAGCCGGUGCACAGUCCGGCAUCCCCCCGCAGGGAGAGAAGA-CC
CCGUGGAGC-UUUACCGCAGCCCGGCGUUGGCCCCCGGGCGGGGGUGCGUAGCGU-AGGU
GGGAGCCGAUG---AGCCACC-CUC----------------------------UCCG---
-----------------------------------GG-GGGUGGGGAGGC-GU-CCAUGA
AACA-CCACC-CACCCCCGCCCGGGGGCCUAACCC-CG--CCC--C-GGGU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------G----GG--------------------
--------------------------------------CGGGGGACA-GCGUCGGGUGGG
CGGUUUGGCUGGGGCGGCACGCCCGCGA-AGGGGUAAC-ACGGGCGCCCAAAGGUCGGCU
CAGGCGGGUCAGAACUCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACC-GGAC
----------------------------------CCCUGAAAGCAAGGGGUCCGGCCGGG
AAA-CCGUGGCCUAGCGCACGCUC-----------GUG---CCCCC-UCG----------
----------GUGGGGGCCGGGCACGACAG-AA--AAGUUACCCCGGGG-AUAACAGAGU
CGUCGCGGGCGAGAGCCCCCAUCGACCCCGCGGUUUGCUACCUCGAUGUCGGCUCUUCCC
AUCCUGGGGGUGCAGCAGCCCCCAAGGGUGGGGCUGCCCGCCCAUUAAAGGGGAACGUGA
GCUGGGUUCAGACCGUCGUGAGACAGGUCGGUCUCUACCCGCG-----------------
---G-GGG--------------------------------------GUGU-GGGCCGCCU
GAGGGGAAGG-UGCCCUUAGUACGAGAGGAA-CGGGGCGCCGCGGCCUC-UGGUG-UACC
GGUUGUCC-UGGU-GGGCAA-C-GCCGGGCAGCUAAGCCGUA-GGGGGUAACCGCUGAAA
GCA-UC--UAAGCGGGAACCCCUCCCCGA-A-AAGAGGCGGCC-GU---UGGGCGCCGGC
CUAGUGCCG---------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GCG
UCCA--CG-AGG----GCUCCCGUAGAAGACGGGGU-UGAUGGGGC-GGGGGUGUGAG-C
CC-C--------GAG-----AGGGCUU-AGCCCU--------CGAGGGGUGUAGCCC--G
CCGCUCCCAAUC--GCCCGAGGC-CG--------
>Archaeoglobus_fulgidus
------CGGCGA--AUAUCCCGGCC-GGUGGAUG-GCUCGGC-UCGG-G---CGCCGACG
AAGGGCGUGC-CAAGCUGCGAAAAGCCCGGGGGAGGCGCAAGGAGCCUU-----AGAAC-
CCG-GGAUUCCCGAAUGGGAUA-UCCU--GU----CCC--------------UUCG----
--------------------G---GGAC-G-CUCC-C-----------------------
------UUAC-----------------------------------GG-G-AG-CGGGAAC
GCGGGGAAAGGAAACAUCUGUGUACCCG--CAGGAAAAGAAAGCAA-ACGCGAUGCCGUG
AGU-AG-GGGCGACCGAAAGCGGC-A-CA-GCCCAAACCGAACAUCCGGGGGU-------
-AAC---UCC-GGAUGGAUGUGGUG--UUG-------U-AG--GACCCUG-----C----
--C------------------UAAUGCCG-----------UG--GA-------ACGAA--
GCCG------AAGUGG-UCUG---------------------------------------
----GAACG-GCCCG-------CCGUAGAGGGUGAUAGCCCCGUA---------GGC---
G--UAAG------UUCCACGG-UUACAA--------------GGCGGGGUAUCCUGAGUA
CCGUGGGUUG---GAAUUCUCGCGGGAA-GCUGGGGGUCAUC--AACCCCCAAGGCUAAA
UA--CGU-C-CCGAGUCCGAUAGC-GCAA-U-AGUAGGGUGACCGAAAG-CUGAAA-AGA
AC-CCCGAGAAGGGG-A-GUG-AAAAGAGCCUGAAAUCGGCCGGGGAUAG-UGAGC-AGU
G---GCUCGAAA-GGU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AA-UCCCGGC--A-------------------AA------GG-AA---
---A------GU------------------GCU---------------------------
------------------------------------------------------------
--------------------------------------GAGA------------------
------------------------------------------------------------
------------------------------------------------G-GC------GC
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------CCGGGACAU----
-------------GCCGG--AGUCACUGCGUACGUUCUGAAGAACGGGCCAGGGAGUGUA
-C-GGCAGGGGCGA-GGCUAAGGAG--------UGAAA--------CUCCGAA--GCCGG
AGGGAAAC-CGACA-----------------------GCCCG-CAGCUU-----------
---------------------------------------------------AUG------
------------------------------CGA-GGGGCG-GGGUG--------------
----------------------UGCU---------------------------C-G-CCU
----------------------GUAGUCCCUGCCGUAC-GACCCGAAGCC-GGGCGAUCU
AGGCGGGGGCAGGGUGAAGCGGUGCGAAAG-CGCCGUGGAGGCCCGC--AGGGGUGUUGA
UGUGCAAAUCGCUCCUCUGACCCCCGUCUAGGGGUGAAAGUCCAAUCGAGCCCGG-GGAU
AGCUGGUUCCCCCCGAGACAUACCGCAGUAUGACCCGUC-CGGA----------------
------------------------------------------------------------
-GGUU-GGCGGUGGGGUAGAGC-ACUGAUAGGA-GGAU-CCGGGGG-G-UG-AC-ACCC-
U-CGCCCUCCUGUCAAACUCCGAAUCCACCG-----------------------------
------------------------------------------------------------
----------------------C-CG-C--CG-UAGAUGGGCGG-AGUCAGG-G-GCAG-
G-GGG-UAAGCUCCUG-UUCCGAGAG-GGAGAC---AACCCAGACCGG-GGUUAAGGCCC
CUAAGU--GC-CGG-CU-AA---GU-GUAAACG-AUAAAGGAGGUCCCGGGUCGAAGACA
GCGGGGAGGUAGGCUUAGAAGCAGCCA-CCCUUUAAAGAGUGCGUAACAGCUCACCCGCC
-----GAGACUCGGGGCGCCGAAAAU-GGAC-GGGGCUCA-AGCCGGC----------CG
CCGAU-ACCCCGGGGCUCCGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGAGA
UC-CGGUAGGGGGGC-GUGCCGA-U-G-GCGCAGAAGCCUG--A-GGCGUAAGCU--C-G
GGUGGAGCCG-UCG-GUAACGAAUAUCC-UGGCGG-UAGUA-GCAGCA-UAGUC-GGGUG
A--G---------------AAUCCC-GAC-CGCCGG-AAGGGC-AAGGGUUCC-ACGGCA
AUGUUCGUCAGCCGUGGGUGAGUCGG--UC-CUAAGGUGGCCCGU-AAC-UCGG---CGC
C-----------------------------------------------------------
-------------------------------------GCC-GA-AAAGGGA-AGCCGGUU
-AAUA-UUCCGGCACCGCU----GCCC------GCU------------------------
-----------------------------------------------GCCUU--------
--------------U--------------------AUGG-CACCC-GACGCCUCGGGAUA
GG-CCGGGCGGGAGC-------UGCC-----A-GCCCGU-CCAA-G-CGUCG-----A-A
-----GC-----CC----------------CCGG-AGA-U-CC-----------------
---GUAAU-GGAGAGAAGG-----GGGUGA----AGGCG-UGA-UG---GC---------
------------------------------------------------------------
-----------G-UA-A-GC-CGGC-C-G-ACUCCUGGGGCCC-GUGAAA-A-GGGGGGC
------------------------------------------------------------
--AGUUGGACCGUACCGAGAACCGACACAGGUG-CCCUGGGU-GAGUAGCCUAAGGC-GU
GGCGGA-ACAUUCCGG-CCGAGGGAAUUCGGC-AAGUUGGCCCCGUAUCUUUGG-UAGAA
GGGGUG-CCUG-C-GG--UUU-------------------AG------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------CAGACCGCA--GGUCGC
AGUGACUAGGGGGGAGCGA-----CUGUUUACUAAAAACACAGGGGGCUGCAAUCCGG--
--CA-A-------------CGGUUUGU-ACAGCCCCUGA-GUCCUGCCCAGUGCGG-G-U
ACCUGAAACCAGGG-------------UACA-------------ACCGGGCGAAGGGC--
CCGUAAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAAUACCUUGCCGCU-UA
AUUGGCGGCUUGCAUGAACGGAUUAACGACU--CCCCCACUGUCCCCGGC----CGG-AA
GCCGGCGAACCCGACAUCCCAGUGAAGAGUCUGGGGACCCCCGUUGGGAAGCGAAGA-CC
CUGUGGAGC-UUUACUGCAGCCUGCCGUUGCUCCACAGCUGGGGGUGCGCAGGGU-AGGC
GGGAGGCUUCG---AAGCCCC-GUC----------------------------UCCG---
-----------------------------------GG-CGGGGUGGAGCC-GU-CGAUGA
GACA-CCGCC-CACCUCCAGCUGUGGAGCUAACUC-C--------C-GCUG---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAGGACA-UCGGUAGGUGGG
CAGUUUGGGUGGGGCGCCACUCCCCCGA-AAAGGUAUC-GGGGGAGCCCAAAGGUCGGCU
CAGGCGGGUCAGAAAUCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACG-UGAA
----------------------------------CCCGCAAAAUAAGGGUUCACGAGCCG
AAA-GGCGGGCCUAGCGAACCACC-----------CUG---GCCUU-UUG----------
----------GUGAGGCCGGGUGACGACAG-AA--AAGCUACCCCAGGG-AUAACAGAGU
UGUCCCCGGCGAGAGUACAUAUCGACCCGGGGGCUUGCUACCUCGAUGUCGGCUCUCCCC
AUCCUGGCCGUGCAGCAGCGGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGGGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUGCUAUCUAAC-----------------
---G-GGG--------------------------------------GUGUCAGGGCGGCU
GAGGGGAAGG-AGGCUCUAGUACGAGAGGAA-CGAGCCUCCGGCGCCAC-UGGUU-UACC
GGUUGUCC-GGCA-GGGCAU-C-GCCGGGCAGCUACGCGCCACGCGGUUAAAGGCUGAAA
GCA-UC--UAAGCCUGAAACCGCCCCCGA-A-AAGAGCCGCCC-AU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UA-AGG----GCUCCCGUAAAAGACGGGGU-UGAUAGGAC-CGGGGUGUAAG-C
GG-C--------GAG-----CU--------UCGG--------CGAGCCGUUCAGCCC--G
CGGUCACUAAUC--GCCCGC-GC-CG--------
>Caldivirga_maquilingensis
-ACCC-GUGCCG--CGAAGCCGUCC-GGUGGAUG-GCUCGGC-UCGG-G---CGCCGAGG
AAGGGCGUGG-CAAGCGGCGAUAUGCCCGGGGUAGCCGCAGGCAGGCGU-----UGAUC-
CCG-GGAUCCCCGAAUGGGGCU-UCC---UA----CCUGG-GCCG--------AAU----
---AGGC---U----C----A---GGUG---CCCC-------------------------
------GUAG------------------------------------G-G-GG-UGGGAAC
GCGGGGAACGGAAACAUCUUAGUACCCG--CAGGAGGGGAAACCAA-AAGGGACCCCCUG
AGU-AG-GGGCGACCGAAAGGGGG-U-UA-GCCCAAACCGAACCCCCAUGGGG-------
UAAC---CGU-GGGGGGAUGUGGUG--UUU-------G-GG--CUUGGGU-----A----
----------------------CCGCCGA-----------GG--CA-------GCCUA--
GCCG------AAGUGG-GCUG---------------------------------------
----GAAAG-CCCCG-------CCGUAGAGGGUGAUAGCCCCGUA---------GGC---
U--AAAG------GUUGCUGG-CGG-AU--------------UCCCAAUGUCCCGGAGUA
CCACGGCUUG---GUUUUGCCGUGGGAA-UACGGGGGCCUCC--AGCCCCUAAGGCUAAG
UA--CGU-C-CCGAGUCCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-CUGAAA-AGA
AC-CCCGC-GAGGGG-U-GUG-AAAAGAGCCUGAAACCGGACGGUUAAAG-GU-GC-GGC
G---GCCCUCAA-GGAUA------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AC-CCCACCU--G-------------------AA------GG-AA---
---A------CC------------------GGG---------------------------
------------------------------------------------------------
--------------------------------------GUGA------------------
------------------------------------------------------------
------------------------------------------------C-CC------GG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGUGGG--G----
-------------UACGG--GGUCGCCGCUUACGUCCAGAAACACGAGCCAGGGAGUUCC
-C-AUCUGUGGCGA-GUCUAAGGGG--------GUUAA--------CCCCGGA--GGCGU
AGGGAAAC-CGAAG-----------------------GCCCG-CAGUCGGG---------
-----------------------------------------U-----UAACCGA------
------------------------------CGA-GGGGCU-GGGUCC-------------
----------------------GUUAA-------------------------GG-G-CCC
----------------------GUAGCCACAGGUGGGA-GACCAGAAACC-GAGCGAUCU
AGCCCGGGGUAGGGUGAAGCGGGGCGAAAG-CCCCGUGGAGGCCCGA-UUGGGGUUCUGA
CGUGCAAAUCGUUCCCGUGACCCUGGGCUAGGGGCAAAAGACCAAUCAAGCUCGG-UGAU
AGCUGGUUCCCCCCGAAGCAGCUCUUAGGCUGGCCUCCC-UGGA----------------
------------------------------------------------------------
-GGGU-GCUCAUGGGGUAGAGC-ACUGAUCCGG-GAUG-CAGGGGC-C-GA-AA-GGCU-
C-CGGUCCCGGGUCAAACUCCGAACCCAUGA-----------------------------
------------------------------------------------------------
----------------------G-CC-C--CA-UUGAAGGGGGG-AGACGGGUU-CCCCG
G-GGG-UAAGCUUGGG-GGCCGAGAG-GGAAAC---AACCCAGACCGG-GGUUAAGGCCC
CAAAGU--GC-GGG-CU-AA---GU-GUCAAUC-UAGAAGGGUGUCUCCCACCGAAGACG
GCGGGACCGUAGGCCCAGCAGCAGCCA-UCGGCUAAGCAACGCGUAACAGCGGACCCGCU
-----GAGGUGGGAGGCCCCGAAGAC-GCACAGGGACUCA-AGCCCGC----------CG
CCGAG-ACCCCGGCCCACGGAU--------------------------------------
------------------------------------------------------------
--------------C-AUUG----------------------------------------
-----------------------------------------------------AUCCGCG
UG-GGGUAGGGGGGC-GUCGCCG-U-G-GGGCG-GAAGCCG--G-GCCGUGAGGU--C-C
GGUGGACCCG-CGG-UGAAUGAGGAUCC-UGGCGG-UAGUA-GCAGCG-AAGAG-GGGUG
G--G---------------AUACCC-CUC-CGCCGGAAAGGCC-CAGGGUUCC-AUGGUA
AUGUUCAUCAGCCAUGGGUUAGCCGG--UC-CUAAGGUGGGGCCU-AAU-UGGC---ACC
C-----------------------------------------------------------
-------------------------------------ACC-GA-A-AGGGA-AACGGGUU
-AAUA-AUCCCGUGCCGUG----GGGG------UAG----------GUUU----------
-----------------------------------------------GCGG--CAAC---
------GC-AG--GC--------------------CCCA-UUCCC-GACGUCUCAGGAUA
GG-GUGAGUGGG-GC-------UGCC-----G-CCCCAU-UUAA-C-CGUCG-----A-A
-----GA-----CC----------------GGGG-AGU-G-CC-----------------
---GUCAU-GGCGAGAACC-----GGUUGA----AGACG-GUA-AUA--GC---------
------------------------------------------------------------
-CGGGC-CUUGAGCCCGGUU-CACC-C-G-ACUCCUGGGGCCC-AUGAAA-A-GGGAAUG
GGGAA--------------------------------------------------CGAGC
C-CCCACGACCGUACCGAGAACCGACACAGGU-CGCCUGGGU-GAGAAGCCCAAGGC-GG
GUCGGG-UCACGCCAG-GCUAGGGAACUCGGC-AAAUUAGCCCUGUAACUUCGG-GAUAA
AGGGUG-CCCG-C-GG--UCU-------GGGUA---------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------AAACCC--GGGACCGUG--GGUCGC
AGUGGCAAGGGGGACCUGA-----CUGUUUAACAAAAACAUAGGUCCCCGCGAGCCCG--
--UA-A-------------GGGUUUGU-ACGGGGGCUGA-AUCCUGGCCACUGGCG-G-U
ACGUGAAACCCGGG-------------UUCA-------------ACCGGGCUAAGCGC--
CGCUGAAG-GCCGGGGGUAACUCUGACCCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UA
AGUUCCGGCGUGCAUGAAUGGAUCAACGAGG--UCCCCACUGUCCCAGCC----UGG-UG
CCCGGCGAACCCACC-UCCAGGUGCAGAGUCCUGGGACCCCCGACGGGGCGAGAAGA-CC
CUGUGGACC-UUUACUGCAGCCCGUCGUUGGGGUGGGGGAGGGGGUGCAUAGUGU-AGGU
GGGAGCGAU-G---AACCAUG-GUC----------------------------UCCG---
-----------------------------------GG-CCGUGGGGAUGC-GU-CAAUGA
AACA-CCACC-CAUCUCCUCCUCUGCCCCUAACCC-UG--GG-----GUUC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------AC--------------------
--------------------------------------CCGGGGACA-GCGGCGGGUUGG
CAGUUUGGCUGGGGCGGCACACCUCUGA-AAAGAUAUC-AGGGGUGCCCUAAGCUCCGCU
CAGGUCGGUCAGAAA----CCGUA-GAGGG-UAAGGCCAA-AUGCGGGGCUGACU-GCCC
----------------------------------CCUUGAACGCUAGGGGGGCAGGGGGG
AAA-CCCGGGCCUAGCGAACGCUC-----------GUG---CCCCCACUG----------
----------GAGGGGGCCGGGCAUGUCGG-AA--AAGGUACCCCAGGA-GUAACCGGCU
CGUCGCGGGUGAGAGUUCCCAUCGACCCCGCGGUUUGGUACCCAGACGUCGUCUCUUCCC
AUCCUGGCGGUGCAGCAGCCGCCAAGGGUGGGGCUGCCCGCCCAUUAAAGGGGAACGUGA
GAUGGGUUCAGACCGUCGUGAGACAGGUCGGUCUCUACCUGUC-----------------
---G-GGG--------------------------------------GUGC-UGGCCGCCU
GAGGGGAAGG-UGCCCUCAGUACGAGAGGAA-CGGGGCGCCGCGGCCUC-UAGUC-UACC
GGUUGUCC-GGCA-GGGCAG-U-GCCGGGCAGCCACGCCGCU-UGGGGUAACCGCUGAAG
GCA-UC--UAAGCGGGAAACCCGCCCCUA-A-AAUAGGCGGCC-GC---CGCCUGACCGG
GGUUACCCGGUUG-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GGG
GUGG--UU-AGG----GCUCCCGUAGAAGACGGGGU-UGAUGGGGU-GGUGGUGUAUC-C
CC-C--------GAG-----GGUU------UUCC--------CGAGGGGGG-AGCCU--G
CCACUCCCAAUC--GCCCGAUG------------
>Haloarcula_marismortui
-GU---UGGCUA--CUAUGCCAGCU-GGUGGAUU-GCUCGGC-UCAG-G---CGCUGAUG
AAGGACGUGC-CAAGCUGCGAUAAGCCAUGGGGAGCCGCACGGAGGCGA-----AGAAC-
CAU-GGAUUUCCGAAUGAGAAU-CUCU--CU-----------------------------
--------------------------AACA-AUUG-C-----------------------
------UUCGC----------------------------------GC-A-AU-GAGGAAC
CCCGAGAACUGAAACAUCUCAGUAUCGG--GAGGAACAGAAAACGCAAUGUGAUGUCGUU
AGU-AA-CCGCGAGUGAACGCGAU-A-CA-GCCCAAACCGAAGCCCU-------------
--------CA-CGGGCAAUGUGGUG--UC--------A-GG--GCUACCU-----C----
--U------------------CAUCAGCC-----------GA--CC-------GUCUC--
GACG------AAGUCU-CUUG---------------------------------------
----GAACA-GAGCG-------UGAUACAGGGUGACAACCCCGUA---------CUC---
G--AGAC------CAGUACGC-UG------------------UGCGGUAGUGCCAGAGUA
GCGGGGGUUG---GAUAUCCCUCGCGAA-UAACGCAGGCAUC--GACUGCGAAGGCUAAA
CA--CAA-C-CUGAGACCGAUAGU-GAAC-A-AGUAGUGUGAACGAACG-CUGCAA-AGU
AC-CCUCAGAAGGGA-G-GCGAAAUAGAGCAUGAAAUCAGUUGGCGAUCG-AGCGA-CAG
G---GCAUACAA-GG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------UC-CCUUGAC--G-------------------AA------UG-AC---
---C------GA------------------CGC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-CG------UC
--------CAGUAAGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------C-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UCACGGGAA----
-------------GCCGA--UGUUCUGUCGUACGUUUUGAAAAACGAGCCAGGGAGUGUG
-U-CUGCAUGGCAA-GUCUAACCGG--------AGUAU--------CCGGGGA--GGCAC
AGGGAAAC-CGACAU----------------------GGCCG-CAGGGCUU---------
--------------------------------------------------UGCC------
------------------------------CGA-GGGCCG-CCGUCU-------------
----------------------UCAA--------------------------GG-G-CGG
----------------------GGAGCCAUGUGGACAC-GACCCGAAUCC-GGACGAUCU
ACGCAUGGACAAGAUGAAGCGUGCCGAAAG-GCACGUGGAAGUCUGU-UAGAGUUGGUGU
CCUACAAUACCCUCUCGUGAUCUAUGUGUAGGGGUGAAAGGCCCAUCGAGUCCGG-CAAC
AGCUGGUUCCAAUCGAAACAUGUCGAAGCAUGACCUCCG-CCGA----------------
------------------------------------------------------------
-GGUA-GUCUGUGAGGUAGAGCGACCGAUUGGU-GUGU-CCGCCUC-C-GA-GA-GGAGU
C-GGCACACCUGUCAAACUCCAAACUUACAG-----------------------------
------------------------------------------------------------
----------------------A-CG-C--CGUUUGACGCGGGG-AUUCCGG-U-GCGC-
G-GGG-UAAGCCUGUG-UACCAGGAG-GGGAAC---AACCCAGAGAUA-GGUUAAGGUCC
CCAAGU--GU-GGA-UU-AA---GU-GUAAUCCUCUGAAGGUGGUCUCGAGCCCUAGACA
GCCGGGAGGUGAGCUUAGAAGCAGCUA-CCCUCUAAGAAAAGCGUAACAGCUUACCGGCC
-----GAGGUUUGAGGCGCCCAAAAU-GAUC-GGGACUCA-AAUCCAC----------CA
CCGAG-ACCUGUCCGUACCACU--------------------------------------
------------------------------------------------------------
--------------C--AUA----------------------------------------
-----------------------------------------------------CUGGUAA
UC-GAGUAGAUUGGC-GCUCUAA-U-U-GGAUG-GAAGUAG--G-GGUGAAAACU--C-C
UAUGGACCGA-UUA-GUGACGAAAAUCC-UGGCCA-UAGUA-GCAGCGAUAGUC-GGGUG
A--G---------------AACCCC-GAC-GGCCUA-AUGGAU-AAGGGUUCC-UCAGCA
CUGCUGAUCAGCUGAGGGUUAGCCGG--UC-CUAAGUCAUACCGC-AAC-UCGA---CUA
U-----------------------------------------------------------
-------------------------------------GAC-GA-AAUGGGA-AACGGGUU
-AAUA-UUCCCGUGCCACU----AUGC---------------------------------
------------------------------------------------------------
----------------------------------AGUGA-AAGUU-GACGCCCUGGGGUC
GA-UCACGCUGG-GC-------AUUC-----G-CCCAGU-CGAA-C-CGUCC-----A-A
-----CU-----CC----------------GUGG-A-A-G-CC-----------------
---GUAAU-GGCAGGAAGC-----GGACGA----ACGGC-GGU-AUA--GG---------
------------------------------------------------------------
-----------G-AA-A--C-GUGA-U-U-CAACCUGGGGCCC-AUGAAA-A-GACGAGC
------------------------------------------------------------
--AUAGUGUCCGUACCGAGAACCGACACAGGUGUCCAUGGCG-GCGAAAGCCAAGGC-CU
GUCGGGAGCAACCAAC-GUUAGGGAAUUCGGC-AAGUUAGUCCCGUACCUUCGG-AAGAA
GGGAUG-CCUG-C-UC--CGG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------AACGGAGCA--GGUCGC
AGUGACUCGGAAGCUCGGA-----CUGUCUAGUAACAACAUAGGUGACCGCAAAUCCG--
--CA-A-------------GGACUCGU-ACGGUCACUGA-AUCCUGCCCAGUGCAG-G-U
AUCUGAACACCUCG-------------UACA-------------AGAGGACGAAGGAC--
CUGUCAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGCCGCA-UC
AGUAGCGGCUUGCAUGAAUGGAUUAACCAGA--GCUUCACUGUCCCAACG----UUG-GG
CCCGGUGAACUGUACAUUCCAGUGCGGAGUCUGGAGACACCCAGGGGGAAGCGAAGA-CC
CUAUGGAGC-UUUACUGCAGGCUGUCGCUGAGACGUGGUCGCCGAUGUGCAGCAU-AGGU
AGGAGACACUACACAGGUACC-CGC----------------------------GCUA---
-----------------------------------GCGGGCCACCGAGUC-AA-CAGUGA
AAUA-CUACC-CGUCGGUGACUGCGACUCUCACUC-C----------GGGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAGGACA-CCGAUAGCCGGG
CAGUUUGACUGGGGCGGUACGCGCUCGA-AAAGAUAUC-GAGCGCGCCCUAUGGCUAUCU
CAGCCGGGACAGAGACCCGGCGAA-GAGUG-CAAGAGCAA-AAGAUAGCUUGACA-GUGU
----------------------------------UCUUCCCAACGAGGAACGCUGACGCG
AAA-GCGUGGUCUAGCGAACCAAU-----------UAG---CCUGC-UUG----------
----------AUGCGGGCAAUUGAUGACAG-AA--AAGCUACCCUAGGG-AUAACAGAGU
CGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCC
AUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAUGUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUACU-----------------
---G-GGU--------------------------------------GUGUAAUGGUGUCU
GACAAGAACG-ACCGUAUAGUACGAGAGGAA-CUACGGUUGGUGGCCAC-UGGUG-UACC
GGUUGUUC-GAGA-GAGCACGU-GCCGGGUAGCCACGCCACA-CGGGGUAAGAGCUGAAC
GCA-UC--UAAGCUCGAAACCCACUUGGA-A-A-AGAGACACC-GC--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------CG-AGG----UCCCGCGUACAAGACGCGGU-CGAUAGACU-CGGGGUGUGCG-C
GU-C--------GAG-----GU----------AA--------CGAGACGUUAAGCCC--A
CGAGCACUAACA--GACCAAAGC-CAUCAU----
>Halobacterium_sp.
-G----UGGCUA--CUGUGCCACCU-GGUGGAUA-GCUCGGC-UCGG-A---UGCCGACG
AAGGACGUGC-CAAGCUGCGAUAAGCCUGAGGGAGCCGCACGGAGGCUA-----AGAAC-
UCA-GGAUCUCCUAAUGGGAAU-CCCU--AU-----------------------------
--------------------------AACA-AUUG-C-----------------------
------CUUGC----------------------------------GC-A-AU-GGGGAAC
GGCCGGAAUUGAAGCAUCUCAGUACGGC--CAGGAAGAGAAAUCGA-AUGAGACGCCGUU
AGU-AA-UGGCGAAUGAACGCGGC-A-CA-GUCCAAACCGAAGCCUU-------------
-----------CGGGCAAUGUGGUG--UU--------C-GG--ACUGACU-----U----
--U------------------CAUCGUUU-----------GA--CC-------GUUCG--
UGUG------AAGUCU-CCUG---------------------------------------
----AAACG-GAGCG-------CGAUACAGGGUGACAGCCCCGUA---------UCA---
C--GGAC------CAGUACGA-CG------------------UGCGUCAGCUCCAGAGUA
GCGGGGGUUG---GAAAUCCCUCGUGAA-UGUGGCAGGCAUC--GACUGCCAAGACUAAG
UA--CUC-U-CCGAGACCGAUAGU-GAAC-A-AGUAGUGUGAACGAACG-CUGAAA-AGC
AC-CCCACAAAGGGG-G-GUGAAAUAGGGCUUGAAAUCAGGUGGCGAUGG-AGCGA-CGG
G---GCAUAAAA-GG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CC-UCUCUGG--G-------------------AA------CG-AC---
---U------UG------------------AGU---------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------A-CU------CA
--------UGGUAGGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------C-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------CUGAGAGGA----
-------------GCCGA--UGUUCCGUCGUACGUUUUGAAAAACGAGCCAGGGAGUGUG
-C-CUGUUUGACGA-GUCUAACCGG--------AGUAU--------CCGGGAA--GGCGU
AGGGAAAC-CAAUAU----------------------GGCCG-CAGCAU-----------
----------------------------------------------------UG------
------------------------------CGA-GGGCCA-CCGUGU-------------
----------------------UCAA--------------------------GC-G-CGG
----------------------GGAGUCAAACGGGCAC-GACCCGAAACC-CGGUGAUCU
ACGCGUGGGCAAGGUGAAGCAUGGCGAAAG-CCAUGUGGAGGCCUGU-UAGGGUUGGUGU
CUUUCAACACCCUCCCGUGACCUACGUGUAGGGGUGAAAGGCCCAUCGAACCGGG-CAAC
AGCUGGUUCCAACCGAAACAUGUCGAAGCAUGACCUCUG-CCGA----------------
------------------------------------------------------------
-GGUA-GUUCGUGGGGUAGAGCGACCGAUUGGG-GAGU-UCAACUC-C-GA-GA-GGAGU
U-GUCUCCCCUGUCAAACUCCAAACCUACGG-----------------------------
------------------------------------------------------------
----------------------A-CG-C--CG-UCGACGCAGGG-AAUCCGG-U-GUGC-
G-GGG-UAAGCCUGUG-CACCGUGAG-GGAGAC---AACCCAGAGUUA-GGUUAAGGUCC
CAAAGU--GC-GAG-CU-AA---GU-GCGA----UUGAAGGUGGUCUCGAGCCCUAGACA
GCCGGGAGGUGAGCUUAGAAGCAGCUA-CCCUCUAAGAAAAGCGUAACAGCUUACCGGCC
-----GAGGUUCGAGGCGCCCAAAAU-GAUC-GGGGCUCA-AGUUCGC----------CA
CCGAG-ACCUAACGGCACGGGU--------------------------------------
------------------------------------------------------------
--------------A--AC-----------------------------------------
-----------------------------------------------------ACCGUGA
UC-CAGUAGGUUGGC-AUUCUGU-U-C-GGGUG-GAAGCUC--G-GGUGAGAACU--C-G
AGUGGACCGA-GUG-GAAAAGAAAAUCC-UGGCCA-UAGUA-GCAGCGUUAGUC-GGGUA
A--G---------------AAUCCC-GAU-GGCCGA-AAGAGC-AAGGGUUCC-UCGGCA
AUGCUUAUCAGCCGAGGGUUAGCCGA--UC-CUAAGGCCCGUCGU-AAU-UCGA---GCG
G-----------------------------------------------------------
-------------------------------------GUC-AA-A-AGGGA-AACUGGUU
-AAUA-UUCCAGUGCCACC----GUAC---------------------------------
------------------------------------------------------------
----------------------------------AUUGA-AAGUC-GACGCCUCGGAGCA
GC-UUGAGCCGG-GC-------AUUC-----G-CCCGGU-CGAA-C-CGUCG-----A-A
-----GU-----UC----------------GUGG-A-A-G-CC-----------------
---GUAAU-GGCAGGAAGC-----GAACGA----ACGUC-GGA-ACA--GG---------
------------------------------------------------------------
-----------G-AA-A--C-UCAA-G-U-CAAUCUGGGGCCC-GUGAAA-A-GGCGAGU
------------------------------------------------------------
--ACGGUGUUCGUACCGAGAUCCGACACAGGUGCUC-UGGCA-GAGGAAGCCAAGGC-CU
GUCGGGAAUAACCGAC-GUUAGGGAAUUCGGC-AAGUUAGUCCCGUAAGUUCGC-GAUAA
GGGAUG-CCUG-C-CU--CGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------AAUGAGGCA--GGUCGC
AGUGACUCGGAGGCUCCGA-----CUGUCUAAUAACAACAUAGGUGACCGCAAAUCCG--
--CA-A-------------GGACGCGU-ACGGUCACUGA-AUCCUGCCCAGUGCGG-G-U
AUCUGAACACCCAG-------------UACA-------------AUGGGGCGAAGGAC--
CCGUUAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGCCGCU-UC
AGUAGCGGCUUGCAUGAAUGGAUCAACGAGA--GCCUCACUGUCCCAACG----UUG-GG
CCCGGUGAACUGUACGUUCCAGUGCGGAGUCUGGAGACCCCCAAGGGGAAGCGAAGA-CC
CUAUAGAGC-UUUACUGCAGGCUGUCGCUGGGACACGGUCGCUGAUGUGCAGAGU-AGGU
AGGAGACGUUACACAGGUACG-UGC----------------------------GCUA---
-----------------------------------GCACGCCACCGAGUC-AC-ACAUGA
AACA-CUACC-CGUCAGUGACUGUGACCCUCACUC-C----------GGGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAGGACA-CCGGUAGCCGGG
CAGUUUGACUGGGGCGGUACGCGCUUGA-AAAGAUAUC-GAGCGCGCCCUAAGCCUAUCU
CAGCCGAGUCAGAGACUCGGCGAA-GAGUG-CAAGAGCAU-AAGAUAGGCUGACA-GUGU
----------------------------------CCUACACAACGAGGGACGCUGACGCG
AAA-GCGUGGUCUAGCGAACCAAU-----------UAG---GCUGC-UUG----------
----------AUGCGGCCAAUUGCUGACAG-AA--AAGCUACCUUAGGG-AUAACAGAGU
CGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCC
AUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUAUU-----------------
---G-GGG--------------------------------------GUGUUUUGGUGCUU
GACAGGAACG-UUCGUAUAGUACGAGAGGAA-CUACGAACGGGUGCCAC-UGGUG-UAUC
GGUUGUCC-GAGA-GGGCAUGU-GCCGAGCAGCUACGCACCA-CGGGGUAAGAGCUGAAU
GCA-UC--UAAGCUCGAAACCCACCUGGA-A-A-AGAAGCACC-AC--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGA----CCGCUCGUAGAAGACGAGUU-CGAUAGACU-UGGGGUGUACG-C
GU-C--------GAG-----GC----------AA--------CGAGACGUUUAGCCC--G
CGAGUACUAACA--GGUCAAUGC-CACAC-----
>Haloferax_volcanii
-CAAC-UGGCUA--CUGUGCCAGCU-GGUGGAUA-GCUCGGC-UCGA-G---AGCCGAUG
ACGGACGUGC-CAAGCUGCGAUAAGCCUCAGGGACCCGCAUGGAGGGAA-----AGAAC-
UGA-GGAUCUCCGAAUGGGAAU-CCCC--AC-----------------------------
--------------------------GC-A-AUUG-C-----------------------
------CUCGC----------------------------------GC-A-AU-GGGGAAC
GUUCCGAAUUGAAACAUCUUAGUAGGAA--CAGGAAAAGAAAGCAAUCCGCGAUGUCGUU
AGU-AA-CGGCGAGUAAACGCGAC-A-CA-GUCCAAACCGAAGCCUU-------------
-----------CGGGCAAUGUGGUG--UA--------C-GG--ACUACCC-----A----
--U------------------AACGGACC-----------UG--GG-------UCUUA--
UGUG------AAGUCU-CCUG---------------------------------------
----GAACG-GAGCG-------UGAUACAGGGUGAAAACCCCGUA---------ACA---
---UAAG------AACCAGAU-CC------------------CGGGGUUGUUCCAGAAUA
GCGGGGGUUG---GAUAUCCCUCGUGAA-UUUCGCAGGCAUC--AACUGCGAAGACUAAA
CA--CUC-C-UCGAGACCGAUAGC-GAAC-A-AGUAGCGUGAGCGAACG-CUGAAA-AGC
AC-CCCGAACAGGGC-G-GUGCAAUAGGGCUUGAAAUCAGUUGGCGAUAG-AGCGA-CGU
G---GCAUACAA-GG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------UC-ACUCGAC--G-------------------AA------AG-AA---
---C------UG------------------GGA---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------U-CC------CG
--------UAGUAUGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------C-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UCGAGUGAA----
-------------GCCGA--UGUUACGUCGUACGUUUUGAAAAACGAACCAUGGAGUGCA
-U-CUGACUGGCGA-GUCUAAGGGG--------UGAAC--------CCCCGGA--GGCAU
AGGGAAAC-CGAUAC----------------------GGCCG-CAGUCUU----------
---------------------------------------------------UGA------
------------------------------CCA-GGGCCA-CCGUCU-------------
----------------------UCAA--------------------------GG-G-CGG
----------------------GGAGCCAACCGGAUGC-GACCCGAAACC-AAGUGAUCU
ACGCCGGAGCAGGGCGAAGCGUGGCGAAAG-CUGCGUGGAGGCCCGU-UAGAGUUGGUGU
CCUACAAUACCCUCUCGUGACUCUGGUGUAGGGGUGAAAGGCCCAUCGAACUUGG-CAAC
AGCUGGUUCCAACCGAAACAUGUCGAAGCAUGACCUCUG-AUGA----------------
------------------------------------------------------------
-GAUA-GUUCGUGAGGUAGAGCGACCGAUUGGG-AAUC-CGGACUC-C-GA-GA-GGAGU
U-CGCUUCCCUGUCAAACUCCGAACUUACGA-----------------------------
------------------------------------------------------------
----------------------A-CG-U--CG-UAGACUCAGGG-AGUCCGG-U-GUGC-
G-GGG-UAAGCUUGUG-CACCGUGAG-GGAGAC---AACCCAGAGCCA-GGUUAAGGACC
CAAAGU--GU-GGA-UU-AA---GU-GUGA----UUGAAGAUUGUCUCGAGCCCUAAACA
GCCGGGAGGUGAGCUUAGAAGCAGCUA-CCCUCUAAGAAUAGCGUAACAGCUUACCGGCC
-----GAGGUUCGAGGCGUCGAAAAU-GAUC-GGGACUCA-AAUCCAC----------CU
CCGAG-ACCUGGCGGCGUGUCU--------------------------------------
------------------------------------------------------------
--------------U--AU-----------------------------------------
-----------------------------------------------------GACACGA
UU-CCGUAGGUUGGC-AUACUGC-A-U-GGGUG-GAAGCAC--G-GGUGAGAACU--C-G
UGUGGACCGU-GCA-GCAACGAAAAUCA-UGGUCU-CAGUA-GCAGCGAGAGUC-GGGUG
U--G---------------AACCCC-GAC-GGCCUU-ACGCGC-AAGGGUUCC-UCGGCA
CUGUCAAUCAGCCGAGGGUUAGUCGA--UC-CUAAGUCUAACCGU-AAU-UCGA---AUU
A-----------------------------------------------------------
-------------------------------------GAU-GA-A-AGGGA-AACUGGUU
-AAUA-UUCCAGUACCUUC----UUGC---------------------------------
------------------------------------------------------------
----------------------------------ACCAA-ACGUC-GACGCUUUAGGAAA
CA-CCGAGCGGG-GC-------CUUC-----G-CCCCGU-CGAA-U-CACCG-----A-A
-----AU-----UC----------------GUGG-A-A-G-CC-----------------
---GUAAC-GGCACGAAGC-----GAACGA----ACGGU-GAG-AUA--GG---------
------------------------------------------------------------
-----------G-AA-A--C-UCGG-C-G-GUACCUAGAGCCC-GUGAAA-A-GACAAGC
------------------------------------------------------------
--AAGAAGCUCGUACCGAGAUCCGACACAGGUGCGC-UGGCA-GAGCAAGCCAAGGC-CU
GUCGGGAUCAACCGAC-GUUAGGGAAUUCGGC-AAGUUAGUCCCGUAAGUUCGC-GAUAA
GGGAUG-CCUG-C-UC--UUG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------ACCGAGCA--GGUCGC
AGUGACUCGGACGCUCCGA-----CUGUCUAGUAACAACAUAGGUGACCGCAAAUCCG--
--CA-A-------------GGACUCGU-ACGGUCACUGA-AUCCUGCCCAGUGCGG-G-U
AUCUGAACACCCAU-------------UACA-------------AUGGGACGAAGGAC--
CCGUCAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGCCGCU-UC
AGUAGCGGCUUGCAUGAAUGGAUCAACGAGA--GCGUCACUGUCCCAACG----UUG-GG
CCCGGUGAACAGUACGUUCCAGUGCGGAGUCUGGAGACCCCCAAGGGGAAGCGAAGA-CC
CUAUAGAGC-UUUACUGCAGGCUGUCGCUGAGACGUGGUCGCUAAUGUGCAGCAU-AGGU
AGGAGCCAUUACACAGGUACC-CGC----------------------------GCCA---
-----------------------------------GCGGGCCACCGAGGC-AG-CAUUGA
AAUA-CUACC-CGUUAGUGACUGCGACUCUCACUC-C----------UGGC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAGGACA-CCGGUAGCCGGG
CAGUUUGACUGGGGCGGUACGCGCUCGA-AAAGAUAUC-GAGCGCGCCCAAAGAUUUCCU
CACGCGAGUCGGGAACUCGUGGAA-GAGCG-CAAGAGCAA-ACGGAAGUCUGACA-GUGA
----------------------------------CAUUCCCAACGAGUGUCGCUGACGCG
AAA-GCGUGGUCUAGCGAACCUAC-----------GAG---GUUCA-UUC----------
----------AUGGGACCCGUAGAUGACAG-AA--AAGCUACCUUAGGG-AUAACAGAGU
CGUCACCGGCAAGAGCACAUAUCGACCCGGUGGCUUGCUACCUCGAUGUCGGUUCCCUCC
AUCCUGCCUGUGCAGAAGCAGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUAUU-----------------
---G-GGG--------------------------------------GUGUUAAGGAACUU
GACGUGAACG-UUCGUAUAGUACGAGAGGAA-CUACGAAUGGGUGCCAC-UGGUG-UACC
GGUUGUCC-GAGA-GGGCAGAU-GCCGGGCAGCUACGCACCA-CGGGGUAAGAGCUGAAC
GCA-UC--UAAGCUCGAAACCCACACGGA-A-A-AGAAGUUCC-AC--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGG----ACACUCGUAGAAGACGAGUU-CGAUAGACU-CGGGGUGUACG-C
AA-C--------GAG-----GU----------AA--------CGAGUUGUUAAGCCC--G
CGAGCACUAACA--GUCCAA-GC-CACAUUC---
>Haloquadratum_walsbyi
-UA-C-UGGCUA--CUGUACUGGCU-GGUGAAUG-GCUCGGC-UCGA-G---AGCCGAUG
ACGGACGUGC-CAAGCUGCGAAAAGCCUGAGGGAGCCGCACGGAGGCUA-----AGAAC-
UCA-GGAUCUCCGAAUGGGAAU-CCCC--AU-----------------------------
--------------------------UGCG-AUUA-C-G---AG----------------
------GUAU-------------------------------CU-CGU-A-AU-CGGGAAC
GCCCCGAAUUGAAACAUCUUAGUAGGGG--CAGGAACAGAAAGCAA-CCGCGAUAUCGUU
AGU-AA-CCGCGAGUGAACACGAC-A-CA-GUCCAAACCGAAUCCGC-------------
-----------AAGGAAAUGUGGUG--UUU-------C-GG--ACCAACA-----A----
--U------------------CACGGACC-----------GC--AC-------GAUAC--
CGAG------AAAUCU-CCUG---------------------------------------
----GAACG-GAGUA-------CGACACAGGGUGACAGUCCCGUA---------UC----
G--UCAU------CACGCGAU-CC------------------CGCGUUGACUCCAGAGUC
GCAAGGGUUG---GCUAUCCCUUGUUAA-UUCCGCAGACAUC--AACUGCGAAGACUACA
CA--CUC-C-UCGAGACCGAUAGC-GAAC-A-AGUAGCGUGAGCGAACG-CUGCAA-AGC
AC-CCCGAACAGGGC-G-GUGCAAUAGGGCCUGAACUCAGUCAGUGAUAG-AACGA-CGA
G---GCAUACAA-GG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------UC-CCACUCA--C-------------------AA------CG-AC---
---C------UG------------------AGA---------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------U-CU------CA
--------CUGUAGAA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------C-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGUGGGAA----
-------------GCCGA--UGUCGCGUCGUACGUUUUGAAAAACGACCCAGGGAGUGCA
-U-CCACCCGGCAA-GUCUAACUGG--------UCCAC--------CCAGGAA--GACGC
AGGGAAAC-CGAUAU----------------------GACCG-CAGUCAUG---------
-----------------------------------------AC--UACUCAUGA------
------------------------------CCA-GGGUCA-CCGUAC-------------
----------------------UUAC--------------------------AU-G-CGG
----------------------GGAGUCGCGUGGAUGC-GACCCGAAACC-GAGUGAUCU
ACGCGCGGGCAAGGUGAAGCGUGCCGAAAG-GUGCGUGGAAGCCUGU-UAGGGAUGGUGU
CCUACAAUACCCUCCCGUGACCCACGUGUAGGGGUGAAAGGCCCAUCGAACUCGG-CAAC
AGCUGGUUCCAGCCGACACAUAUCGAAGUAUGUCCUCAG-CCGA----------------
------------------------------------------------------------
-GGUA-GUCUGCGAGGUAGAGCUACCGAUUGGA-UGUC-CCGCCUC-C-GA-GA-GGAGU
C-GGCCAUGCUGUCAAACUCCAAACUUGCAG-----------------------------
------------------------------------------------------------
----------------------A-CG-C--CG-UAGACGCUGGG-AAUCCGG-A-CUGC-
G-GGG-UAAGCCUGUG-GUCCAUGAG-GGAGAC---AACCCAGAGCAG-GGUUAAGGUCC
CCAAGU--GU-GGA-UU-AA---GU-GCAA----CUGAAGGUUGUCUCGAGCCCUAAACA
GCCGGGAGGUGAGCUUAGAAGCAGCUA-CCCUCUAAGAAAAGCGUAAUAGCUUACCGGCC
-----GAGGUUCGAGGCGCCCAAAAU-GAUC-GGGGCUCA-AAUCCAC----------CA
CCGAG-ACCCUGCAAUACUUAU--------------------------------------
------------------------------------------------------------
--------------U--AU-----------------------------------------
-----------------------------------------------------CAAGUAA
CU-UCGUAGG-UGGC-GUACUGA-C-C-GGAUG-GAAGUAC--G-GGCGAGAGCU--C-G
UAUGGACCGC-UCA-GUAACGAUAAUCC-UGGUCA-CAGUA-GCAGCAAUAGUC-GGGUG
U--G---------------ACCCCC-GAC-GGCCUA-ACGAGC-AAGGGUUCC-UCGGCA
CUGCUAAUCAGCCGAGGGUUAGCCGG--UC-CUAAGUCUGACCGU-AAU-UCGA---CUC
A-----------------------------------------------------------
-------------------------------------GAC-AA-ACAGGGA-AACUGGUU
-AAUA-UUCCAGUGCCGUC----GUGU---------------------------------
------------------------------------------------------------
------------------------------------CUU-A-UCG-AACGCUUUCGGAAA
CA-GUGAACGGG-GC-------CAUC-----G-CCCCGU-CGAA-U-CAUGG-----A-A
-----UC-----UC----------------GUGG-A-U-G-CC-----------------
---GUAAC-GGCACGAAGC-----GGGAGA----AUCAU-GAG-ACC--GC---------
------------------------------------------------------------
-----------G-CA-A-----GUC-A-C-UGGUACCAAGAGC-CCGUGA-A-AAAACAC
------------------------------------------------------------
--ACGACGUCCGUACCAAGAUCCGACACAGGUGCUC-AGGCA-GCGAAAGCCAUGGC-CC
GUCGGGACCAACCGGC-GUUAGGGAAUUCGGC-AAGUUAGUCCCGUACCUUCGG-AAGAA
GGGAUG-CCUG-C-UC--UUG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------ACCGAGCA--GGUCGC
AGUGACUCGGACGCUCCGA-----CUGUCUAGUAACAACAUAGGUGACCGCAAAUCCG--
--CA-A-------------GGACUCGU-ACGGUCACUGA-AUCCUGCCCAGUGCAG-G-U
AUCUGAACACCUCG-------------UACA-------------AGAGGACGAAGGAC--
CUGUUAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGCCGCU-UC
AGUAGCGGCUUGCAUGAAUGGAUCAACGAGA--GCGUCACUGUCCCAACG----CUG-GA
CCCGGUGAACUGUACGUUCCAGUGCGGAGUCUGGAGACCCCCAAGGGGAAGCGAAGA-CC
CUAUAGAGC-UUUACUGCAGGCUGUCGCUGAGACAUGGUCGCUGAUGUGCAGCAU-AGGU
AGGAGCCGAUACACAGGUAUC-CGC----------------------------GCCA---
-----------------------------------GCGGAUCACCGAGGC-AC-UCAUGA
AAUA-CUACC-CGUCAGUGACUGUGACUCUCACUC-C----------GGGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAAAACA-CCGGUAGCCGGG
CAGUUUGACUGGGGCGGUACGCGCUCGA-AAAGAUAUC-GAGCGCGCCCAAAGGUCUCCU
CACGUGAGUCGGAAACUCACAGAC-GAGCG-CAAGAGCAC-ACGGAGGCCUGACA-GUGA
----------------------------------UCUUCCCAACGAGGAUCGCUGACGCG
AAA-GCGUGGUCUAGCGAACCAAC-----------GAG---GUUCA-GAG----------
----------AUGGGACCCGUUGAUGACAG-AA--AAGCUACCUUAGGG-AUAACAGAGU
CGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCC
AUCCUGCCUGUGCAGACGCAGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUAUU-----------------
---G-GGG--------------------------------------GUGU-AAGGUACUU
GCGAGGAACG-CUCGUAUAGUACGAGAGGAA-CUACGAGUGGGUGCCAC-UGGUG-UAUC
GGUUGUCC-GACA-GGGCAGUU-GCCGAGCAGCCACGCACCA-CAGGGUAAGAGCUGAAU
GCA-UC--UAAGCUCGAAACCUCCCUCAA-A-A-AGAAGUACC-AU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------GA-AGG----AUCCUUCUAGAAGAGAAGGU-AGAUAGACU-CGGGGUGUACG-C
AU-C--------GAG-----GC----------AA--------CGAGAUGUUGAGCCC--G
CGAGCACUAACC--AUCCAA-GC-CAUAAUC---
>Halorubrum_lacusprofundi
-----------A--CUGUGCCAGCU-GGUGAAUG-GCUCGGC-UCGA-G---AGCCGAUG
AAGGACGUGC-CAAGCUGCGAAAAGCUCAUGGGACCCGCAUGGAGGGGA-----AGAAC-
AUG-AGAUAUCCGAAUCGGAAU-CCGU--UU-----------------------------
--------------------------AC-A-AUUG-C-----------------------
------CACGC----------------------------------GC-A-AU-AGGGAAC
UCCCUGAAUUGAAACAUCUCAGUAAGGG--AAGGAAAAGAACGCAA-UAGCGAUGUCGUC
AGU-AA-CCGCGAGUGAACGCGAC-A-CA-GCCCAAACCGAAGGUCU-------------
--------UC-GGACCAAUGUGGUG--UU--------C-GG--GUUGACA-----A----
--U------------------CAAUUCUC-----------GA--CA-------UUUCA--
UCUG------AAGUCU-CCUG---------------------------------------
----GAAUG-GAGCG-------UGAAACAGGGUGACAACCCCGUA---------AGA---
U--GAGA------CAGUACGA-AG-------------------GCGUCAAUACCAGAGUA
GCAGGGGUCG---GAUAUCCUCUGUGAA-CGACUCAGGCAUC--CCCUGAGAAGGCUAAA
CA--CUC-C-UCGAGACCGAUAGC-GAAC-A-AGUAGCGUGAGCGAACG-CUGAAA-AGC
AC-CCCGAGAAGGGC-G-GUGCAAUAGGGCCUGAAAUCAGUUGGCGAUCG-AGCGA-CAG
G---GCGUACAA-GG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CG-UCUCUUA--A-------------------AA------CG-AG---
---C------GA------------------GAA---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------U-UC------UC
--------UAGUAGGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------A-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGAGACGA----
-------------GCCGG--CGUCGUGUCGUGCGUUUUGAAAAACGACCCAGGGAGUGCA
-C-UUGAUUGGCGA-GUCUAACCCG--------UGAAC--------CGGGGAA--GGCGC
AGGGAAAC-CGAUAC----------------------GGCCG-CAGCACAU---------
-------------------------------------------------UCGUG------
------------------------------UGA-GGGCCA-CCGUGU-------------
----------------------UCAA--------------------------GC-G-CGG
----------------------GGAGUCAAUUGGGUGC-GACCCGAAACC-AGGCGAUCU
AUACACAGGCAGGGUGAAGCGUGGCGAAAG-CCACGUGGAGGCCCGU-UAGAGUUGGUAU
UCUACAAUAUCCUCUCGUGAUCUGUGCAUAGGGGUGAAAGGCCCAUCGAGCCUGG-CAAC
AGCUGGUUCCAACCGAAACAUGUCGAAGCAUGACCUCAU-CCGA----------------
------------------------------------------------------------
-GAUA-GCCCGCGGGGUAGAGCUACCGAUUGGA-UGAC-CCGCCUC-C-GA-GA-GGAGU
C-GGCCAUCCUGUCGAACUCCAAACCCGCAG-----------------------------
------------------------------------------------------------
----------------------G-CG-U--UG-UAGACGAUGGG-AGUCCGG-U-GCGC-
G-GGG-UAAGCCUGUG-UACCGUGAG-GGGAAC---AACCCAGAGCCG-GGUUAAGGUCC
CAAAGU--GU-AGA-UU-AA---GU-GCGA-----CGAAGGUGGUCUCAAGCCCUAAACA
GCCGGGAGGUGAGCUUAGAAGCAGCUA-CCCUCUAAGAAAAGCGUAACAGCUUACCGGCC
-----GAGGUUUGAGGCGCCCAAAAU-GAUC-GGGGCUCA-AAUCUAC----------CA
CCGAG-ACCUGGCCGUGCCCUU--------------------------------------
------------------------------------------------------------
--------------G--ACA----------------------------------------
-----------------------------------------------------GGGGCAA
CC-GCGUAGGUUGGC-GUUCUGU-U-C-GGAUG-GAAGCAC--G-GGUGAGAACU--C-G
UGUGGACCGU-UCA-GAAACGACAAUCC-UGGUCA-CAGUA-GCAGCGAUAGUC-GGGUG
A--G---------------AACCUC-GAC-GGCCUG-AAGAGC-AAGGGUUCC-UCGGCA
CUGCCACUCAGCCGAGGGUCAGCCGG--UC-CUAAGAUGCACCGU-AAC-UCGA---CUG
C-----------------------------------------------------------
-------------------------------------AUC--A-A-CGGGA-AACUGGUU
-AAGA-UUCCAGUGCCAUC----GUGC---------------------------------
------------------------------------------------------------
----------------------------------AGUAA-ACGUC-GACGCCGUGUGGAA
CG-CUGAGCCGG-GC-------UUUC-----G-CCCGGU-CGAA-U-CGUGG-----A-A
-----AC-----UC----------------GUGG-A-A-G-CC-----------------
---GUCAC-GGCACGAAGC-----GAGCGA----AACGC-GAG-AUA--GC---------
------------------------------------------------------------
-----------G-CA-A--G-UCAG-C-C-GUACAUAGGGCCC-GUGAAA-A-GACAAGC
------------------------------------------------------------
--ACGAUGUCCGUACCAAGAUCCGACACAGGUGCUC-UGGCA-GCGCAAGCCAAGGC-CU
GUCGGGAG-AACCGAC-GUUAGGGAAUUCGGC-AAGUUAGUCCCGUACCUUCGG-AAGAA
GGGAUG-CCUG-C-UC--UCG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------ACGGAGCA--GGUCGC
AGUGACUCGGGCGCUCCGA-----CUGUCUAAUAACAACACAGGUGACCGCAAAUCCG--
--CA-A-------------GGACUCGU-ACGGUCACUGA-AUCCUGCCCAGUGCGG-G-U
AUCUGAACACCUCG-------------UACA-------------AGAGGACGAAGGAC--
CCGUCAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGCCGCU-UC
AGUAGCGGCUUGCAUGAAUGGAUAAACGAGA--GCGCCACUGUCCCAACG----UUG-GA
CCCGGUGAACUGUACGUUCCAGUGCGGAGUCUGGAGACCCCCAAGGGGAAGCGAAGA-CC
CUAUAGAGC-UUUACUGCAGGCUGUCGCUGAGACGUGGUCGCCGAUGUGCAGCAU-AGGU
AGGAGUCAUUACACAGGUACC-CGC----------------------------GCCA---
-----------------------------------GCGGGCCACCGAGAC-AA-CAUUGA
AAUA-CUACC-CGUCGGUGACUGCGACUCUCACUC-C----------GGGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAGUACA-CCGGUAGCCGGG
CAGUUUGACUGGGGCGGUACGCGCUCGA-AAAGAUAUC-GAGCGCGCCCGAAGAUCAUCU
CAGCCGGGUCGGAAAUCCGGCGAA-GAGCG-CAAGAGCAC-AAGAUGGUCUGACA-GUGU
----------------------------------CAUUCCCAACGAGUGACGCUGACGCG
AAA-GCGUGGUCUAGCGAACCUAC-----------GAG---GCUCC-GGA----------
----------AUGGGGCCCGUAGAUGACAG-AA--AAGCUACCUUAGGG-AUAACAGAGU
CGUCACCCGCAAGAGCACAUAUCGACCGGGUGGCUUGCUACCUCGAUGUCGGUUCCCUCC
AUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUAUU-----------------
---G-GGG--------------------------------------GUGUCAAGGUACUU
GACGUGAACG-AACGUAUAGUACGAGAGGAA-CUACGUUUGGUCGCCAC-UGGUG-UACC
GGUUGUGU-GAGA-ACGCAA-U-GCCGGGUAGCCACGCGACA-CGGGGUAAGAGCUGAAC
GCA-UC--UAAGCUCGAAACCCACAUGGA-A-A-AGAAGUACC-GA--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGG----UCACUCGUAGAAGACGAGUU-CGAUAGACU-CGGGAUGUACG-C
AC-C--------GAG-----GC----------AA--------CGAGGUGUUGAGUCC--A
CGAGCACUAACA--GACCGAAGC-CACAGUC---
>Hyperthermus_butylicus
-UCAC--GGCAC--GGACGCCGCCC-GGUGGAUG-GCUCGGC-UCGG-G---CGCCGACG
AAGGGCGCGG-CAAGCGGCGAUAUGCCCGGGGUAGGCGCAGGCAGCCGU-----GGAAC-
CCG-GGAUCCCCGAAUGGGGCC-UCCC--GC----CACGG-GCG---------AAU----
----AGC---C----C----G---UGGC-G-CUCG-GGA---AACC--------------
------GUUA---------------------------GGGAGU-ACC-G-AG-UGGGAAC
CCCCCGAACGGAAACAUCUUAGUAGGGG--GAGGAAAAGAAAGCAA-CAGCGAUCCCCUG
AGU-AG-GGGCGACCGAAAGGGGG-A-GA-GCCCAAACCAAUCCUCCGCGGGA-------
UAAC---CGC-GGAGGGAUGAGGGG--UUG-------C-GG--CCCCGCG-----G----
--CUGGGGCUUCGAGCCCCAGCGGGCCGA-----------CC--CC-------GGGUA--
GCCG------AAGUGG-GCUG---------------------------------------
----GAAAG-CCCCG-------CCGUAGAGGGUGACAGCCCCGUA---------GGC---
U--AAAC------CCGGGGGG-CCC-----------------GCGCCGCGGGGCAGAGUA
CCACGGCUUG---GUUCUGCCGUGGGAA-GCUGGGAGUCACC--GACUCCCAAGGCUAAA
UA--CGU-C-CCGAGACCGAUAGC-GAAC-U-AGUACCGUGAGGGAACG-CUGAAA-AGC
AC-CCCGG-AAGGGG-G-GUG-AAAAGAGCCUGAAACCGGGCGGCUAAGC-AC-GG-GGC
G---GCCCGAAA-GGGAGG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AG-GCCCCCC--G-------------------AA------GG-AA---
---A------CC------------------GGC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-CC------GG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGGGGC-GG----
-------------ACCGG--GGUCGCCCCGUCCGUCUUGAAACACGGGCCGGGGAGUUCA
-C-GGCCGUGGCGA-GCCUAAGGGG--------UUCAC--------CCCCGAA--GGCGC
AGGGAAAC-CGACGA----------------------GCCCG-CAGCCGGG---------
-----------------------------------------GG--U-UCCCCGG------
------------------------------CGA-GGGGCG-GGGUCC-------------
----------------------GAAA--------------------------GG-G-CCC
----------------------GGAGUCACGGCCGUGA-GACCAGAAACC-GGGCGAUCU
AGGCGGGGGCAGGGUGAAGCCGGGCGAAAG-CCCGGUGGAGGCCCGA--AGGGGUUCUGA
CGUGCAAUUCGUUCCCCUGACCCCCGUCUAGGGGUGAAAGGCCAAUCUAGCCCGG-UGAU
AGCUGGUUCCCGCCGAAGUGCCUCGCAGGGCAGCCCCGC-CGGA----------------
------------------------------------------------------------
-GGCCGGGCCGCGGGGUAGAGC-ACUGAUUGGG-GGUG-CAGGGGG-C-GUAAU-GCCC-
C-CGGCCCCCUAUCAAACUCCGAACCCGCGG-----------------------------
------------------------------------------------------------
----------------------C-CG-C--CG-UAGAUGGCGGG-AGUGGGGCU-CCCC-
G-GGG-UAAGCCCGGG-GGCCGAGAG-GGGAAC---AACCCAGACCGG-GGUUAAGGCCC
CCAAGG--GC-CGG-CU-AA---GU-GCCAA---CGAAAGGGCGUCCUCGGCCUCAGACA
GCGGGGAGGUGGGCCUAACAGCAGCCA-UCCUCUAAGGAGUGCGUAACAGCUCACCCGCC
-----GAGGCCGAGGGCCCCGAAGAUAUGUC-GGGGCUUA-AGCCGGC----------CG
CCGAA-ACCCCGGGGGCGGGCC--------------------------------------
------------------------------------------------------------
--------------GCUAUG----------------------------------------
---------------------------------------------------CGGCCCGCA
UC-CGGUAGGCGGGC-GUCGGGG-C-G-GCGCA-GAAGGCG--G-GCCGUGAGGC--C-C
GCUGGAGCCG-CCC-CGAGUGCGGAUCC-CGGCGG-UAGUA-ACAGCG-AAGAG-GGGUG
A--G---------------AAUCCC-CUC-CGCCGGAAAGGGC-AAGGGUUCC-UCGGCA
ACGGUCGUCGGCCGAGGGUGAGCCGG--CC-CUAACCGGGGCCGU-AAC-ACGG---ACC
C-----------------------------------------------------------
-------------------------------------CGG-GA-A-AGGGA-AACGGGUU
-AAUA-UUCCCGUGCCGCG----GGGGUAGG----U------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AA---GC--------------------CCCG-CCUCC-GACGCCUCCGGGUA
GG-CCGACCGGG-GG-CGGCC-GAAGGGCCGCGACCCGG-CUAA-C-CGCUG-----A-A
-----GG-----CC----------------GGGG-AGU-G-CC-----------------
---GUAAU-GGCGAGAACC-----GGCCGA----AGGCG-GGA-AUG--GG---------
------------------------------------------------------------
-GGGCC--GUUAGGCCCCUU-CGGC-C-G-AUCCCGGGGGCCC-UUGAAA-A-GGGGGCG
GGGAA--------------------------------------------------CGAUC
C-CCCGCGCCCGUACCGAGAACCGACACAGGUGCCCCUGGGU-GAGAAGCCCCAGGC-GU
CUGGGGGGCAACCCGG-GCCAGGGAACUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCCG-C-GG--UCUG------GGGGUAG-------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------ACCCCC--UGGACCGCG--GGUCGC
AGUGCCUAGGGGGGCCUGA-----CUGUUUAAUAAAAACAUAGGUCCCCGCAAGCCCG--
--AA-A-------------GGGUGUGU-ACGGGGGCCGA-AUCCUGGCCACUGGCG-G-U
CCGUGAAACCGGGG-------------UUCA-------------ACCCGGCGAAGCGC--
CGCUGAAG-GCCGGGAGUAACUCUGACUCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UA
AGUUCCGGCGCGCAUGAAUGGAUCAACGAGG--UCCCCACUGUCCUGGCC----CGG-GG
CCCCGUGAACCCACGGAGCCGGUGCACAGGCCGGCAUCCCCCCGCAGGGCGAGAAGA-CC
CCGUGGAGC-UUUACCGCAGCCUGGGGUUGCCCUUCGGGCCUGGGUGCGUAGCGU-AGGU
GGGAGCCGAUG---AGCCACC-CUC----------------------------UCCG---
-----------------------------------GG-GGGUGGGGAGGC-GC-CAAUGA
AACA-CCACC-CACCCAGGCCCGGGGGGCUUACCC-CC--GGC--G-GGAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------G----CC--------------------
--------------------------------------GGGGGGACA-GCCCCAGGUGGG
CGGUUUGGCUGGGGCGGCACGCCCGCGA-AAAGGUAAC-ACGGGCGCCCAAAGGUCGGCU
CAGGCGGGUCAGAGCUCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACC-GGAC
----------------------------------CCCUAAAAGCAGGGGGUCCGGCCGGG
AAA-CCGCGGCCUAGCGAACGCUC-----------GUG---CCCCCCUCG----------
----------GUGGGGGCCGGGCAUGACAG-AA--AAGUUACCCCGGGG-AUAACAGAGU
CGUCGCGGGCGAGAGCUCCCAUCGACCCCGCGGUUUGCUACAUCGAUGUCGGCUCUUCCC
AUCCUGGGGGUGCAGCAGCCCCCAAGGGUGGGGCUGCCCGCCCAUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGACUCUACCCGCG-----------------
---G-GGG--------------------------------------GUGU-GGGCCGCCU
GAGGGGAAGG-UGCCCCUAGUACGAGAGGAA-CGGGGCGCCGCGGCCUC-UAGUG-UACC
GGUUGUCC-GGCA-GGGCAG-C-GCCGGGUAGCCACGCCGUA-GGGGGUAACCGCUGAAA
GCA-UC--UAAGCGGGAACCCCUCCCCGA-A-AAGAGGCGGCC-GC---CAGCCCGGGGC
CA----CCC---------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GGG
CUGG--CC-CGG----GCUCCCGUAGAAGACGGGGU-UGAUGGGGC-GGGGGUGUAAG-C
CC-C--------GAG-----GGCGUUA---GGCC--------CGAGGGGUUCAGCCC--G
CCGCUCCCAAUC--GCCCGGA-------------
>Ignicoccus_hospitalis
---------CGC--GUAAGCCGCCC-GGUGGAUG-GCUCGGC-UCGG-G---CGCCGACG
AAGGGCGUGG-CAAGCUGCGAUAAGCCCGGGGGAGGCGCACGCAGCCGU-----CGAAC-
CCG-GGAUCCCCGAAUGGGACU-UCCU--GC----CGGGG-GCG---------AAC----
----AGC---C----C----C---CGGC-G-CGGG-G-----------------------
------AGAA------------------------------------C-C-CG-CGGGAAC
CCCCCGAACGGAAACAUCUUAGUAGGGG--GAGGAAGAGAAACCACCACGGGAUCCCCCG
AGU-AG-GGGCGACCGAAAGGGGG-G-UA-GCCCAAACCAAUUCCCCACGGGA-------
UAAC---CGU-GGGGAGAUGAGGGG--UGG-------A-UG--CCCCGCG-----G----
--CU--CCCCCUCGAGGGGAGGGGCCCGA-----------CC--CU-------CGGUA--
CCCG------AACUCC-GGUG---------------------------------------
----GAA-C-CGGGG-------CCGUAGAGGGUGACAGCCCCGUA---------GGG---
G--AAAC------CGAGGGGG-GCC-----------------CUGCCGCGGGGAUGAGUA
CCACGGCUUG---GUAUUGCCGUGGGAA-GCUGGGUGGCACC--AGCAUCCAAGGCUAAA
CA--CGU-C-CCGAGACCGAUAGC-GAAC-UAGGUACCGUGAGGGAAAG-CUGAAA-AGC
AC-CCCUG-GCGGGG-G-GUG-AAAAGAGCCUGAAACCGGGCGGUCACAC-AG-GG-UGC
G---GCCCGCAA-GGGAUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AA-GCC-CCG--G-------------------AA------GG-AA---
---A------CC------------------CGG---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------C-CG------GG
--------GAGUACGU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGU-GC-AG----
-------------ACCGG--GGUCGCACCUUUCGUCUUGAAACACGGGCCGGGGAGUGCA
-C-GGCCGUGGCGA-GGCUAAGGGG--------UUCAC--------CCCCGUA--ACCGC
AGGGAAAC-CGACGA----------------------GCCCG-CAGGGGCU---------
-----------------------------------------------CAUGCCC------
------------------------------CGA-GGGGCG-GGGUCC-------------
----------------------GCAA--------------------------GG-G-CCC
----------------------GGAGUCACGGUCGUGC-GACCCGAAACC-GGGCGAUCU
AGGCGGGGGCAGGGUGAAGCCGGGCGAAAG-CCCGGUGGAGGCCCGC--AAGGGUUCUGA
CGUGCAAUUCGUUCCCCUGACCUCCGCCUAGGGGUGAAAGGCCAAUCUAGCUCGG-UGAU
AGCUGGUUCCCGCCGAAGUGGGUCUAAGCCCAGCGUCCC-CGGA----------------
------------------------------------------------------------
-GGCG-GGCCACGGGGUAGAGCUACUGAUGGGA-GGUG-CAGGGGGGC-GU-AG-GCCC-
C-CGGCCUCCCGUCAAACUCCGAACCCGUGG-----------------------------
------------------------------------------------------------
----------------------C-CG-C--CG-UAGAAGGGGGC-AGUGGGGCG-CCCC-
G-GGG-UAAGCCCGGG-GGCCGAGAG-GGGAAC---AACCCAGACCGG-GGUUAAGGCCC
CCAAGU--GC-CGG-CU-AA---GU-GCCAAC--CGAAAGGGCGUCUCGGGCCUCAGACA
GCGGGGAGGUGGGCCUAACAGCAGCCA-CCCUCUAAGGAGUGCGUAACAGCUCACCCGCC
-----GAGGCCCGAGGCCCCGAAGAUUGGUC-GGGGCUUA-AGCCGGC----------CG
CCGAG-ACCCCGGGCCCCCCUC--------------------------------------
------------------------------------------------------------
--------------CCGGUG----------------------------------------
----------------------------------------------------GGAGGGGG
UG-CGGUAGGCGGGC-GUCGGGG-C-G-GCCCA-GAAGGCG--G-GCCGUGAGGU--C-C
GCUGGAGCCG-CUC-CGAGUGCCGAUCC-CGGCGG-UAGUA-ACAGCG-AAGAG-GGGUG
A--G---------------AAUCCC-CUC-CGCCGGAAAGGGC-AAGGGUUCC-CCGGCA
ACUGUCAUAGGCCGGGGGUGAGUCGG--UC-CUAACCCGCCUCCC-AAC-UGGA---GCG
C-----------------------------------------------------------
-------------------------------------GGG-GA-A-AGGGA-AGCCGGUU
-AAUA-UUCCGGCACCGCG----GGGGUAGG----U------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AA---GC--------------------CCCA-CCUCC-GACGCCUCGGGGUA
GG-CGGACCGGG-GC-------UGUC-----G-CCCCGG-CUAA-C-C-CCG-----A-A
-----GG-----CC----------------CUGG-AGG-G-CC-----------------
---GUAAC-GGCGAGAAGG-----GGCCGA----AGGCG-GGA-AGG--GG---------
------------------------------------------------------------
-CCCCC--GUAUGGGGGCUU-CCGC-C-G-AUCCCUGGGGCCC-AUGAAA-A-GGGGGUG
GGGAA--------------------------------------------------CGAUC
C-CCCGCGCCCGUACCGAGAACCGACGCAGGUGCCCCUGGGU-GAGAAGCCCAAGGC-GG
CUGGGGGUUAACCCGG-GCCAGGGAACUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUG-C-GG--UCCU------GGGGCCC-------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------ACCCCU--GGGACCGCA--GGUUGC
AGUGCCUAGGGGGGCCUGA-----CUGUUUAAUAAAAACAUAGGUCCCCGCAAGCCCG--
--AA-A-------------GGGUGUGU-ACGGGGGCCGA-AUCCUGGCCACUGGCG-G-U
CCGUGAAACCGGGG-------------UUCA-------------ACCCGGCGAAGCGC--
CGCUGAAG-GCCGGGAGUAACUCUGACUCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UA
AGUUCCGGCGCGCAUGAAUGGAUCAACGAGG--UCCCCACUGUCCCGGCC----CGG-GG
CCCCGUGAACCCCCUGAGCCGGUGCACAGUCCGGCAACCCCCCGUAGGGAGAGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCCGGCGUUGCCCCCCGGGUGGGGGUGCGUAGCGU-AGGU
GGGAGCCGGUG---AACCGGC-CCC----------------------------UCCG---
-----------------------------------GG-GGUCGGGGAGGC-GC-CCAUGA
AACA-CCACC-CACCCUCACCCGGGGGGCUUACCC-CG--GG---G-GAAG---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CC--------------------
--------------------------------------CGGGGGACA-GCGCCGGGUGGG
CAGUUUGGCUGGGGCGGCACGCCCGCGA-GAGGGUAAC-ACGGGCGCCCUAAGGUCGGCU
CAGGCGGGUCAGAAACCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACC-GGAC
----------------------------------CCCUAAAGGCAGGGGGUCCGGCCGGG
AAA-CCGCGGCCUAGCGAACGCUC-----------GUG---UCCCCCCUG----------
----------GUGGGGGCCGGGCAUGACAG-AA--AAGUUACCCCGGGG-AUAACAGAGU
CGUCGCGGGCGAGAGCCCACAUCGACCCCGCGGUUUGCUACCUCGAUGUCGGCUUUUCCC
AUCCUGGGGGUGCAGCAGCCCCCAAGGGUGGGGCUGCCCGCCCAUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGACUCUACCCACG-----------------
---G-GGG--------------------------------------GUGU-CGGCCGCCU
GAGGGGAAGG-UGCCCUCAGUACGAGAGGAA-CGGGGCGCCCCGGCCUC-UGGUG-UACC
GGUUGUCC-GGCA-GGGCAG-A-GCCGGGCAGCUACGCCGGA-AGGGGUAACCGCUGAAA
GCA-UC--UAAGCGGGAACCCCACCCCGA-A-AAGAGGCGGCC-AU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGG----GCUCCCGUAGAAGACGGGGU-UGAUGGGGC-GGGGGUGUAAG-C
CC-C--------GAG-----GGGU------UUCC--------CGAGGGGCG-AGCCC--G
CCGCUCCCAAUC--GCCCGAGGC-CGUUAGC---
>Metallosphaera_sedula
-GCUA-GGGACA--AGAAGUCGUCC-GGUGGAUG-GCUCGGC-UCAG-G---GGCCUAAG
AAGGGCGCGG-CAAGCGGCGAAAUGCCCAGGGGAGGCGCACGCAGCCUU-----AGAUC-
CUG-GGAUCCCCGAAUGGGAAU-UCCU--GC----CUGGA-GUU---------AAC----
----AGC---U----C----C---AGGC-G-UCCC-------------------------
------GUAA------------------------------------G-G-GA-CGGGAAC
CCCCCGAACGGAAGCAUCUUAGUAGGGG--GAGGAGGAGAAAUCAA-UUGAGAUUCCCUG
AGU-AG-GGGCGACCGAAAGGGGA-A-CA-GCCCAAACCAAAUCCGCUAGUGA-------
CGAG---CUG-GCGGAGAUGUGGUG--UUU-------C-UG--GCCCUGG-----G----
--UC--A-GGG-GCAACCCAGCCUCCGGU-----------GU--CU-------GGAUA--
GCCG------AAUUCA-CCUG---------------------------------------
----GAAAG-GUGAG-------CCAUAGAGGGUGACAGCCCCGUA---------GGC---
G--AAAU------CCAGGCGG-GAG-----------------GUGGCCCAGGGCAGAGUA
CCAUCCCCUG---GUUUGGGGGUGGGAA-GAUGGGAGACACG--UGCUUCCAAGGCUAAA
UA--CUU-C-CUGAGACCGAUAGC-GAAC-UCAGUACUGUGAAGGAAAG-CUGAAA-AGC
AC-CCCGG-AAGGGG-A-GUG-AAAAGUGCCUGAAACCGGGCGAUUACAC-AG-GG-CAA
G---GCCCUGAA-GGGCUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AC-UUCCCCC--G-------------------AA------GG-AA---
---A------GG------------------GAC---------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------G-UC------CU
--------CAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGGGAA-UG----
-------------ACCAG--GGUCUUGCUUUUCGUCUUGAAACACGGGCCGGGGAGGUCA
-C-GUCAGUGGCGA-GCCUAAGGUG--------GUCAG--------CACCGAA--GGCAA
AGGGAAAC-CGAGG-----------------------AUCCG-CAACCCGG---------
-----------------------------------------GA----AACCGGG------
------------------------------UGA-GGGAUC-GGGUCU-------------
----------------------GUCA--------------------------GG-G-CCU
----------------------UGAGUCACUGGCGUGA-AACUAGAAACC-GGGCGAUCU
AGACCUGGGCAGGUCGAAGUCGGGGGAAAC-CCCGAUGGAGGACCGAAUAGGGGUUCUGA
CGUGCAAUUCGUUCCCUUGACCUGGGUCUAGGGGCAAAAGACCAAUCUAGCCCGG-UGAU
AUCUAGUUCCCUCCGAAAUGCGUCCUAGCGCAGCCUCCC-UGGA----------------
------------------------------------------------------------
-GGUU-GCUCAUGGGGUAGAGAUACUGAUUGGG-GGC--CUC-UGA-C-GA-AA-GUCA-
G-GGGAACCCAGUCAAACUCCGAACCCAUGG-----------------------------
------------------------------------------------------------
----------------------G-CG-C--CA-GAGAAGGGGGG-AGUGGAU-C-ACCC-
G-GCG-UAAGGUUGGG-UGGUAAGAG-GGGAAC---AACCCAGACCCG-GGUUAAGGUCC
CCAAGU--AC-UGG-CU-AA---GU-GCGAAUC-UGGAAGGGCGUCCCAUGCCUAAGACA
GCGGGAAGGUGGGCCCAGCAGCAGCCA-UCCUCUAAGGAGUGCGUAACAGCUCACCCGCC
-----GAGGCCUGGGGCCCUGCAGACUAGUC-GGGGCUCA-AGCCAGU----------CA
CCGAU-ACCCGGGGGGUGGCGC--------------------------------------
------------------------------------------------------------
--------------UCAUUG----------------------------------------
-----------------------------------------------------AGUGUCA
CC-CGGUAGGGGGGC-GCCGCGG-U-G-GGCGA-GAAGGUG--G-GCCGUGAGGU--C-C
ACUGGACCCU-CCG-CGGGUGCAGAUCC-CGGCGG-CAGUA-AUAGCG-AAGGA-GGGUG
A--G---------------AAUCCC-UCC-CGCCGA-AAGGGC-AAGGGUUUC-CCGGCA
AUGUUCGUCAACCGGGAGUUAGCCGG--UC-CUAAGGCAGGGCCU-AAC-UGGU---ACC
U-----------------------------------------------------------
-------------------------------------GUC-GA-A-AGGGA-AAGGGGUU
-AAUA-UUCCCCUGCCACG----GGGGUAGG----U------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-UG--CGG--------------------GGAU-CUCCU-GACGGAUCGAGGUA
CG-GGGAGUGGG-GC-------CAUC-----G-CCCCAU-CCAA-G-UACCG-----A-A
-----GU-----CC----------------CUGG-AGA-G-CC-----------------
---GUAAU-GGUGAGAAGG-----GGACGA----AGGCU-CGA-UGG--GC---------
------------------------------------------------------------
-CUUCC--GUUAGGAGGGUU-CUCC-G-G-AUCCUUGGUCCCC-AUGAAA-A-GGGAGAU
CCCAA--------------------------------------------------CGAUC
C-UCCGUGACCGUACCCAGAACCGACACUGGUGCCCCUGGGU-GAGAAGCCCAAGGC-GU
CUGGGGGGUAACUCAG-GCUAGGGAACUCGGC-AAAAUGGUCCCGUACCUUCGG-AAGAA
GGGAUG-CCUA-C-CA--UUGU------AGU-----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------UACGCU--GCAGUGGUA--GGUCGC
AGUGACCAGGGGGAUCUGA-----CUAUUUAAUAAAAAUAUAGGUCCCCGCUAGCCCG--
--AA-A-------------GGGUGUGA-ACGGGGGCUAA-AUCCUGGCCACUGGCG-G-U
CGGUUAAACCCGGG-------------UCCA-------------ACCGGGCGAAGCCC--
CGCUGAAG-GCCGGGGGUAACUCUGACCCUCUCAAGGUAGCCAAAUGCCUUGCCGGG-CA
AGUUCCGGCGCGCAUGAAUGGAUCAACGUGA--UCCCCACUGUCCCAGCC----UGG-GG
CCCCAUGACCGCCCAGAGUGGGUUCACAGUCCCGCAACUCCUCACACCGAGAGAAGA-CC
CCGUGGAGC-UUCACCGCAGCCUGGCGCUGGUUCUCGGGCGUUCAUGCGUAGCGU-AGGU
GGGAGGCGUCG---AAGUCGU-CCC----------------------------UUCG---
-----------------------------------GG-GGCGAUGGAGCC-GC-AAGUGA
AACA-CCACC-CAUGAAUGCUCGGGAACCUAACCU------------GCGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------AGGGACA-ACGUCAGGUGGG
CGGUUCGGCUGGGGCGGCACUCCCGCGA-AAAGAUAAC-ACGGGAGCCCAAAGGUCAGCU
CAGGCGGUACAGAACGCCGCCGUA-GAGUG-CAAGGGCAA-AAGCUGGCCUGACG-AGAC
----------------------------------CCUUCAAAGUACGGGGUCUCGACGCG
AAA-GCGCGGCCUAGCGAACGCUC-----------AUG---CCCCCACAC----------
----------GUGGGGGCUGGGCAUGACAG-AA--AAGUUACCCCGGGG-AUAACAGGGU
CGUCGCGGGCGAGAGCUCCCAUCGACCCCGCGGUUUGCUACAUCGAUGUCGGCUCUUCCC
ACCCUGGAGGUGCAGCUGCCUCCAAGGGUAGGGCUGCCCGCCCGUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGCGAGACAGGUCGGACUCUAAGGGUG-----------------
---A-GGG--------------------------------------GUGC-ACGCCGCCU
GAGGGGAAGG-UACUCCUAGUACGAGAGGAA-CAGGGUAUCGGGGCCUC-UAGUU-UGCC
GGUUGUCC-GAUA-GGGCAG-C-GCCGGGCAGCCACGCCCUA-GGGGGUAACCGCUGAAA
GCA-UC--UAAGCGGGAACCCCUCCCCGA-A-AAGAGGCGGCG-GU---GUAUUGGCCGC
AA----GCA---------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------GCA
UGCG--GG-AGC----CCUCCCCAAGAACAGGGGGU-UGAUGGGGU-GGGGGUGUAAG-C
CU-C--------GAG-----GGCGA----AAGUC--------CGAGGGGUUCAGCCU--G
CCACUCCCAAUC--GGGCGAGUC-CAGCGC----
>Methanocaldococcus_jannaschii
----------------AGCCCACCU-GGUGGAUG-GCUCGGC-UCGGGG---CGCCGAGG
AAGGGCGUGG-CAAGCUGCGAUAAGCCCGGGGGAGGCGCAGGCAGCCGU-----GGAAC-
CCG-GGAUCCCCGAAUGGGACU-UCCU--GC----CCC--------------AUUU----
--------------------G---GGGC-G-CUCC-C-G---------------------
------UUAG------------------------------------G-G-AG-CGGGAAC
GCGGGGAAAAGAAGCAUCCGAGUACCCG--CAGGAAAAGAAACCAA-CAGGGAUGCCGGG
AGU-AG-GGGCGACCGAAACCGGC-A-CA-GGGCAAACCGAAUCCCUAUCCGU-------
-AAG---GGU-AGGGAGAUGUGGAG--UUG-------C-AG--GGCCCCC-----A----
--AU----------------AUAGACCCC-----------CA--CU-------GGGAA--
GCCG------AAGUCC-CCUG---------------------------------------
----GAAUG-GGGCG-------CCAUAGAGGGUGAAAGCCCCGUA---------GGC---
G--UAAC------CAGUUGGG-GGU-----------------CUGGGGUGUCCCUGAGUA
CCGCGCGUUG---GAUAUCGCGCGGGAA-GCUGGGAGACAUU-AGGCUUCCAACCCUAAA
UA--CGU-C-CCGAGACCGAUAGC-GAAC-U-AGUACCGUGAGGGAAAG-CUGAAA-AGC
AC-CCCUU-GCGGGG-G-GUG-AAAAGAGCCUGAAACCAGGUGGGUACGG-AAUGG-CAC
G---GCCCGAAA-GGU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AA-CCACCCC--G-------------------AA------GG-AA---
---A------CU------------------CCC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-GG------AG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGGUGGCAU----
-------------GCCGG--GGUCGUGCCGUCCGUUUCGAAAAACGGGCCGGGGAGUGUA
-C-GGGUGUGGCGA-GCCUAAGGGG--------UUCAA--------CCCCGGA--GGCGU
AGGGAAAC-CGACAU----------------------GCCCG-CAACCCUU---------
-------------------------------------------------AUGGG------
------------------------------UGA-GGGGCG-GGGUCU-------------
----------------------UAAU--------------------------GG-G-CCC
----------------------GGAGUCACACCCGUAC-GACCCGAAACC-GGGCGAUCU
AGGCCGGGGUAGGGUGAAGCCCCUCGCCAG-AGGGGUGGAGGCCCGC--AGGGGUGUUAC
CGCGCAAAGUGCUCCUCUGACCCCGGUCUAGGGGUGAAAAGCCAAUCGAGCCCGG-AGAU
AGCUGGUUCCCCCCGAAAUAACUCGCAGGUUAGCCGGGG-GUUA----------------
------------------------------------------------------------
-GGUA-GAUGGCGGGGUAGAGCCACGGAUAGGG-UGUU-UAGGGGG-C-GA-GA-GCCC-
U-CGGCACCCUGUCAAACUCCGAACCCGUCA-----------------------------
------------------------------------------------------------
----------------------U-CG-C--CG-UAGCCCCCGAG---UGAGG-G-CAUA-
C-GGG-UAAGCCGUAU-GUCCGAGAG-GGGAAC---AACCCGGACCCG-GGUUAAGGCCC
CUAAGU--GC-CGG-CU-AA---GU-GUAAAU--GAGAAGGGAGUCCCUGGCCUAAGACA
GCGGGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAGUGCGUAACAGCUCACCCGUC
-----GAGGUCAGGGGCCCCGAAGAU--AAC-GGGGGCUA-AGCCGGC----------CG
CCGAG-ACCCGGGGGGGCUGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAAGCCA
UC-CGGUAGGGGGGC-GUCCCGC-G-G-GGGUA-GAAGCUC--G-GCCGUGAGGU--C-G
GGUGGACCCC-GUG-GGAACGAGAAUCC-CGGCAG-UAGUA-ACAGCA-AAGUG-GGGUG
A--G---------------AAUCCC-CAC-CGCCGA-AGGGGC-CAGGUUUCC-ACAGCA
ACGGUCGUCAGCUGUGGGUUAGCCGG--UC-CUAACCCCCGGGGU-AAU-UCCC---UGG
G-----------------------------------------------------------
-------------------------------------GGG-GA-A-AGGGA-AGCGGGUU
-AAUA-UUCCCGCGCCACC----GGGGUACG----U------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AA---GG--------------------CCAG-CUCCU-GACGCUUCGGGGUA
GG-CCGACCACC-CC-------CGUC-----G-GGGUGG-CCAA-G-CGCAU-----A-A
-----GC-----CC----------------GGGG-AGU-G-CC-----------------
---GUAAU-GGCGAGAACC-----GGGCAA----AAGCG-UGA-UGG--GC---------
------------------------------------------------------------
-CCUCC--GUUAGGAGGGUU-CGGC-U-G-AGCCCUGGAGCCC-GUGAAA-A-GGGAGCU
GGCAA--------------------------------------------------GGAUC
C-CCGGUGACCGUACCCAGAACCGACACAGGUGCCCCUAGGC-GAGUAUCCUAAGGC-GU
GUCGGG-AGAAUCCGG-CCCAGGGAAGUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUG-C-GG--UCUU------CUCUA---------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------AGUGAG--GGGACCGCA--GGUCGC
AGUGGCCAGGGGGGUCCGA-----CUGUUUAAUAAAAACACAGGUCUUGGCUAGCCCG--
--UA-A-------------GGGUGUGU-ACCAAGGCCGA-CGCCUGCCCAGUGCCG-G-U
ACGUGAAACCCGGG-------------UACA-------------ACCGGGCGAAGCGC--
CGGUAAAC-GGCGGGGGUAACUAUAACCCUCUUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCAUGAAUGGCGUAACGAGA--CCCCCACUGUCCCGGGC----CGG-AA
CCCGGUGAACCUACCAUUCCGGUGCAAAGGCCGGAGACCCCCAGUGGGAAGCGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGUCGUUGGGGCAUGGCCGUGGGUGCACAGCGU-AGGU
GGGAGCCGUCG---AAGCCAC-CCC----------------------------UCCG---
-----------------------------------GG-GGUGGUGGAGGC-GC-CCAUGG
GACA-CCACC-CACCCAUGGCCAUGUCCCUAACCC-C--------G-UAAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGGGGACA-CCGGCAGGUGGG
CAGUUUGGCUGGGGCGGCACCCCCCUGA-AAAGGCAUC-AGGGGGGCCCAAAGGUCGGCU
CAGGCGGGUCAGAACUCCGCCGUG-GAGUG-CAAGGGCAA-AAGCCGGCCUGACU-UGGU
----------------------------------CGGUAAAAGAGGCCGACCAAGAGGCG
AAA-GCCGGGCCUAGCGAACCCCU-----------GUG---CCUCA-CCG----------
----------AUGGGGGCCAGGGAUAACAG-AA--AAGCUACCCCGGGG-AUAACAGAGU
UGUCGCGGGCAAGAGCCCAUAUCGACCCCGCGGCUUGCUACAUCGAUGUCGGUUCUUCCC
AUCCUGGGCCUGCAGCAGGGCCCAAGGGUGGGGCUGUUCGCCCAUUAAAGGGGAUCGUGA
GCUGGGUUUAAACCGUCGUGAGACAGGUUGGUUGCUAUCUGCU-----------------
---G-GGG--------------------------------------GUGU-UGGCCGCCU
GAGGGGAAGG-UGGCUCUAGUACGAGAGGAA-CGAGCCGCCGGCGCCUC-UGGUC-UACC
GGUUGUCC-GACA-GGGCAU-U-GCCGGGCAGCUACGCGCUA-AGGGAUAAGGGCUGAAG
GCA-UC--UAAGCCCGAAACCCUCCCCGA-A-AAUAGGCGGCC-AG---UCCCU------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UCG
GGGA--CG-AGG----GCUCUCCUAUAAGAGGAGGU-UGAUAGGCC-GGGGGUGUAAG-C
GC-C--------GAG-----GGCU-----UUGCC--------CGAGGCGUUCAGCCC--G
CCGGUACUAAUC--GCCCAAGGG-CCCGGCAG--
>Methanococcoides_burtonii
-ACUC-UGGUAA--UUAUGCCGUCA-GGUGGAUG-GCUCGGC-UCAA-G---CGCUGAUG
AAGGACGUGC-CAAGCUGCGAUAAGCUCAGGGUAGGUGCAUGGAACCUA-----UGAAC-
CUG-AGAUUUCCUAAUGAGACC-UCUU--AG----CAC--------------AUUU----
--------------------G---UGCU-G-AUCA-------------------------
------GUAA------------------------------------U-G-AU-CGGGAAC
GCCCCGAAUUGAAACAUCUUAGUAGGGG--CAGGAAGAGAAAUCGA--AGAGAUGCCGUU
AGU-AA-UGGCGAAUGAACACGGC-A-CA-GUUCAAACUGAAUCCCU-CCAGU-------
-AAU---GUG-AGGGAGAUGUGGUG--UUA-------U-AG--GACUUUC-----U----
--AA----------------GAUUCCUAU-----------CU--UU-------UCUUA--
GCUG------AACUUU-UCUG---------------------------------------
----GAACG-UUAGA-------CCAUAGAGUGUGAUAGUCACGUA---------AGC---
A--AUGA------AAAGAGGA-AU------------------UGGAAAUGUUCCUGAGUA
UCGUGUGUUG---GAAAUCACGCGAGAA-UUUGGGAGGCACC--AACUUCCAAAACUAAA
UA--CGU-C-UUGAGACCGAUAGC-GAAA-U-AGUAGGGUGACCGAAAA-CUGAAA-AGU
AC-CCCCAAAAGGGA-G-GUU-AAAAGUGCCUGAAACCUGAUGGUGAUGG-AGCGA-UAU
G---GCAUGAAA-GGAU-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-UUAGUUC--G-------------------AA------GG-AA---
---U------CA------------------ACC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-GU------UG
--------UAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UUCUAA--U----
-------------GCCGA--UGUCAUAUCAUACGUUUUGAAGAACGGGCCAGGGAGUGUA
-A-CUAAGUGGCGAUGGCUAACCUU---------UUAU--------CUGGGAA--GCCGA
AGCGAAAG-CAACAU----------------------GCGUG-CAACCUUU---------
-------------------------------------------------ACGGG------
------------------------------UGA-GACGCG-GCGUAU-------------
----------------------ACAA--------------------------GU-G-CGU
----------------------GGAGUCACUAAGUUAC-GACCCGAAGCC-GGGUGAUCU
AGGCGUGGGCAGGUUGAAGCGUGGCGAAAG-CUACGUGGAGGACCGC-AAGCGGUAUUGA
UCUGCAAAUCAUUCGUGUGACCUGCGUCUCGGAGUGAAAGGCUAAUCUAACCCGG-CAUC
AGCUGGUUCCUUCCGAAACAUGUCGUAGCAUGACCUAAC-UGGA----------------
------------------------------------------------------------
-GAUA-GUCGGUGGAGUAGAGC-ACUGAUUGAU-GGCC-CUGGGGA-A-GA-AA-UUCC-
U-CAUCCGUCUGUCAAACUCCGAACCCACCG-----------------------------
------------------------------------------------------------
----------------------U-CG-U--CG-UAGAAGGUUGG-AGUCCGG-A-CUACU
G-GGG-UAAGCCUGUA-GUCCGUAAG-GGAGAC---AACCCAGCCCGU-GGUUAAGGUCC
CUAAGU--GU-CGA-CU-AA---GU-GUUAAUA-CUAAAGGGCGUCCCAAGCCCUAGACA
GCUGGAAGGUUAGCUUAGAAGCAGCUA-UCCUUUAAAGAGUGCGUAACAGCCCACCAGUC
-----GAGGUUUGGGGCCCCGAAAAU-GGAC-GGGGCUCA-AGUCGAC----------CA
CCGAU-ACCACGGAGUACCGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGUAA
UC-UCGUAGGAAGGC-GUUGCGU-U-U-GGGUA-GAAGCAG--G-GCUGUGAAGU--C-C
UGUGGACCGA-GCG-GAAACGAAAAUCC-UGGUAA-UAGUA-GCAGCA-UAGUU-AGGUG
A--G---------------AAUCCU-AAC-CGCCGA-AGGGGC-UAGGUUUCC-UCGGCA
AUGAUCGUCAGCCGAGGGUUAGUCGG--UC-CUAAGUUGUACCGU-AAU-UCGA---GUA
C-----------------------------------------------------------
-------------------------------------AUC-AA-A-AGGGA-AACAGGUU
-AAUA-UUCCUGUACUAUU----CAAC---------------------------------
------------------------------------------------------------
-----------------------------------AAUA-AAACU-GACGUUUUGGGGCA
GG-CUGAGCGGC-GC-------UGUC-----G-CGCCGU-UUAA-G-CAUCU-----A-A
-----AU-----CU----------------GUGG-AGA-G-CC-----------------
---GUAAU-GGCGAGAAGC-----AGACGA----AUAUG-UUA-UG---AC---------
------------------------------------------------------------
-----------G-AA-A-GU-CGGC-U-G-CACCCCGGAACCC-GUGAAA-A-GGGAGU-
------------------------------------------------------------
--UGAAUAUCCGUACCGAGAUCUGACACAGGUGCCCCUAGCU-GAAAAGGCUAAGGC-GU
GUCGGA-AUAAUUUGG-CUAAGGGAAUUCGGC-AAAUUGGCUCCGUAACUUCGG-GAGAA
GGAGUG-CCUG-C-CG--UGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------AGACGGCA--GGUCGC
AGUGACCAGGGAACUCUAA-----CUGUCUAAUAUCAACAUAGGAGAUCGCAAACCCG--
--UA-A-------------GGGCUAGU-ACGAUCUCUGA-AUCCUGCUCAGUGCAG-G-U
ACCUGAAACUUCGG-------------UUCA-------------ACGGAAUGAAGGGC--
CUGUAAAC-AGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCU-UA
AUUGGCGACUUGCAUGAAUGGAUCAAUGAGA--GUUCUACUGUCCCUAGC----CAG-AG
UCCGGUGAAGCUUACAUUCUAGUGCAGAGUCUAGAGACCUCUAGGGGGAAGUGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGUCGCUGGGUUGUGAUUUUGGAUGUACAGUGU-AGGU
AGGAGACGUCG---AAGCCGG-UGC----------------------------GCCA---
-----------------------------------GC-AUCGGUGGAGUC-GC-AAUUGG
GACA-CUACC-CUUCCAAAGUUACGACCCUCACUC-C----------GUGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAGGACC-CCGAUAGGUGGG
CAGUUUGCCUGGGGCGGGACGCCCUUGA-AAAGAUAUC-AAGGGCGCGCAAUGGUUAACU
CAAGUGGGUCGGAAACCUACUGAA-GAGUG-CAAGAGCAU-AAGUUAGCCUGACG-UGAU
----------------------------------UCAGCACAGUAGUGGAUCACGAGACG
AAA-GUCGGUUCUAGCGAACCUUU-----------AUG---CCCGC-UUG----------
----------GUGCGGGCUAAAGAUGACAG-AA--AAGUUACCCCGGGG-AUAAUUGAGU
CGUUGCCGGCAAGAGCACAUAUCGACCCGGCAGCUUGCUACCUCGAUGUCGGUUCUUUCC
AUCCUGGCUGUGCAGCAGCAGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUACU-----------------
---A-GAG--------------------------------------GUGU-AUGUGGUCU
GAGGGUAAGU-UGCUUUUAGUACGAGAGGAA-CAGAGCAACGGCGCCAC-UGGUC-GAUC
GGUUGUCU-GACA-AGGCAC-U-GCCGAGCAGCUACGCGCUA-AGGAAUAAGAGCUGAAU
GCA-UC--UAAGCUCGAAAUCUAACCUAA-A-A-AGAGACCAC-UU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UA-AGG----GUUCCGGUAAAAGACCGGAU-CGAUAGGAA-UGGGAUGUAAG-C
AC-C--------AAG-----GC----------AA--------CGAGGUGUUCAGUCC--G
CAUUUACUAAU---AUCCGUGCC-UC--------
>Methanococcus_aeolicus
-CCACAUAUCUA--UUACCCUAUCU-GGGGGAUG-GCUUGGC-UUGGAA---CGCCUAUG
AAGGACGUGG-UAAGCUGCGAUAAGCUCAUGCGAGGCGCAUACAGCCGU-----AGAAC-
AUG-AGAUUUCCGAAUGGGACU-UCCU--GC----UC---------------UUUU----
------------------------GAGC-G-AUUC-------------------------
------GUAA------------------------------------G-A-AU-CGGGAAC
GCGGGGGAUUGAAGCAUCUUAGUACCCG--CAGGAAGAGAAAUCAA-ACGAGAUUCCGUU
AGU-AG-AGGCGAUUGAACACGGA-A-CA-GGGCAAACUGAAUCCCG-------------
--------CA-AGGGAGAUGUGGUG--UUA-------U-AG--GAAACUC-----U----
--U------------------ACGACUUA-----------GG--AA-------AGGAU--
GCCG------AAGUUG-UCUG---------------------------------------
----GAAAG-GCACA-------UCAUAGAGGGUGAUAAUCCCGUA---------GGU---
A--UAAC------UGACCUGA-GU------------------UUGAGAUUUUCCUGAGUA
CCGUGCGUUG---GAUAUCGCGCGGGAA-UUUGGGAGGCAUC--GACUUCCAACCCUAAA
UA--CGU-U-CCAAGACCGAUAGU-GCAC-U-AGUACCGUGAGGGAAAG-CUGAAA-AGC
AC-CCUUA-ACCGGG-U-GUG-AAAAGUGCCUGAAACCAGAUAGGUAUCG-UAUGG-CAU
G---GCUCCAAA-GGC--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AA-CUAUUCC--G-------------------AA------GG-AA---
---U------CC------------------AUU---------------------------
------------------------------------------------------------
--------------------------------------GUAA------------------
------------------------------------------------------------
------------------------------------------------A-AU------GG
--------UAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAAUAG-AG----
-------------UCCAG--AGUUGUGUCGUCCGUUUCGAAAAACGGGCCGGGGAGUAUA
-U-UGUUGUGGCGA-GCCUAAGACC--------UUUAU--------GGUCGGA--GGCGU
AGGGAAAC-CAACAA----------------------GUCCG-CAAGCUUU---------
---------------------------------------------------UGC------
------------------------------UGA-GGGACG-GGGUC--------------
----------------------UUAAG--------------------------G-G-CCC
----------------------GGAGUCACAGCGAUAU-GACCCGAAACC-GGGCGAUCU
AGGCCAGGGCAAGGUGAAGUCCCUCAUCAG-AGGGAUGGAGGCCUGC--AGAGGUGCUGC
CGUUCGAAGCGCUCUUCUGACCUUGGUCUAGGGGUGAAAGGCCAAUCGAGCCCGG-AGAU
AGCUGGUUCCCCCCGAAGUAACCCUAAGGUUAGCCGGAG-GUUA----------------
------------------------------------------------------------
-GGUA-GAUGGCAGGGUAGAGC-ACUGAUAGAG-GGGU-UAGGGGA-C-GA-AA-GUCC-
U-CGCCUUUCUGUCAAACUCCGAACCUGUUA-----------------------------
------------------------------------------------------------
----------------------U-CG-C--UG-CAGCCUCUGAG-AA--AGG-G-CAUA-
C-GGG-UAAGCUGUAU-GUCCGAGAC-GGGAAU---AGCCGCGACUCA-GGUUAAGGUCC
CUAAGU--AC-UGA-UU-AA---GU-GUGAAC--ACGAAGGGCGUCCUUGGCCUAAGACA
GCAGGGAGGUUGGCUUAGAAGCAGCCA-UCCUUAAAAGAGUGCGUAACAGCUCACCUGUC
-----GAGGUCAGGGGCCCCGAAAAU-GGAC-GGGGCU-A-AAUCAGU----------UA
CCGAG-ACCUGAGGGCACCGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGUGA
UC-CGGUAGGGGGGC-GUUCUGU-A-A-GGGCA-GAAGUUU--G-GCUGUGAAGU--C-A
AAUGGACCUU-GUA-GAAAUGAAGAUCC-CGGUAG-UAGUA-ACAGCACAAGUG-GAGUG
A--G---------------AAUCUC-CAC-CGCCGA-AGGGGC-AAGGGUUUC-ACAGCA
AUGUUCGUCAGCUGUGAGUAAGCCGG--UC-CUAACUUCCGAGGU-AAC-UCCU---UUG
G-----------------------------------------------------------
-------------------------------------AAG-GA-A-AGGGA-GACAGGUU
-AAUA-UUCCUGUGCCAUC----UAAAUACA----C------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AA---GG--------------------UUAG-UUUCU-GACGCUUCAGGGUA
UG-CUAACUACU-CU-------UGUC-----U-GGGUAG-UCAA-A-UGUAU-----A-A
-----GU-----CU----------------GGGG-AGA-G-UU-----------------
---GUAAU-AACGAGAACC-----AGAUGA----AAGCA-UGA-UGA--UC---------
------------------------------------------------------------
-CAUCC--UUUAGGAUGGUU-UGGC-A-G-AUCUCUGGAGCCC-GUGAAA-A-GGGAACU
AUCAU--------------------------------------------------GGAUU
U-UAGAUGACCGUACCCAGAACCGACACUGGUGCCCCUAGGU-GAGUAUCCUAAGGC-GU
AUCGGA-UGAAUCUAG-UCGAGGGAAGUCGGC-AAAAUGGCUCCGUAACUUCGG-GAGAA
GGAGUG-CCAG-U-GA--CCUUGUC----------------------A------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------AGGGUCGCU--GGUCGC
AGUGACCAGGGAGGUCCGA-----CUGUUCAAUACAAACACAGGUCUUAGCUAGUCUG--
--AA-A-------------AGAUGUGU-ACUAAGGCCGA-CGCCUGCCCAGUGCUG-G-U
ACGUGAACCCCGGG-------------UUCA-------------ACCGGGCGAAGCGC--
CAGUAAAC-GGCGGGGGUAACUAUAACCCUCUUAAGGUAGCGAAAUUCCUUGUCGGG-UA
AGUUCCGACCUGCAUGAAUGGCGUAACGAGA--CCUCCACUGUCCCCGAC----UAG-AA
UCCGGUGAACCUACCAUUCCGGUGCAAAGGCCGGAGACUUCCAGUGGGAAGCGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGUCGUUGGGGCAUGAUUGUGGGUGUACAGUGU-AGGU
GGGAGCCAUCG---AAACCUU-CUC----------------------------GCUA---
-----------------------------------GG-GAAGGUGGAGGC-GU-CCAUGG
GACA-CCACC-CUCCUAUGAUCAUGUCCCUUACCC-A----------AGUA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------UGGGGACA-CCGGUAGGUGGG
CAGUUUGGCUGGGGCGGUACCCUCCUAA-AAAUGCAUC-AGGAGGGCCCAAAGGUUGGCU
CAAGCGGGUCAGGACUCCGCUGUU-GAGUG-UAAGGGCAA-AAGCCAGCCUGACU-UAGU
----------------------------------UGUCCACAAUACGCAACUAAGAGACG
AAA-GUCGGGCCUAACGAACCCCU-----------GUG---CCUCA-CCG----------
----------AUGGAGGCCAGGGAUGACAG-AA--AAGCUACCCCGGGG-AUAACAGAGU
UGUCGCGGGCAAGAGCCCAUAUCGACCCCGCGGCUUGCUACCUCGAUGUCGGUUUUUCCC
AUCCUGGAUCUGCAGCAGGAUCCAAGGGUGGGGCUGUUCGCCCAUUAAAGGGGAUCAUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUGGUUGCUAUCUGCU-----------------
---G-GAA--------------------------------------GUGU-UGGCUGUCU
GAGGGAAAGG-UGGUUCUAGUACGAGAGGAA-CGAGCCGCCGGUGCCUC-UAGUU-UAUC
GGUUGUCC-GACA-GGGCAU-U-GCCGAGCCGCCACGCACCA-AGGGAUAAGAGCUGAAA
GCA-UC--UAAGCUCGAAGUCCAUCCUGA-A-AACAGACAGCC-GU---CCUUC------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------------UAG
GAGG--CG-AGG----GGUCCCAUAGAAGAUGGGUU-UGAUAGGCU-AGGAAUGUAAG-C
AU-C--------AAG-----GU--------UUUC--------CGAGAUGUUUAGUUC--G
CUAGUACUAACC--CCCCAAGAG-AUA-------
>Methanocorpusculum_labreanum
---------UUC--UUAUGCCGGUU-AGUGAAUG-GUUCGGU-UUGA-G---AGCUGAUG
AAGGGCGUGC-CAAGCAGCGAAAUGCCCCGGGAAGACGCAAGGAGUCUG-----UGAUC-
CGG-GGAUCCCCUAAUAGGACC-UCCC--CA----CGA--------------UUUA----
--------------------U---CGUG-A-AUCC-------------------------
------GUAA------------------------------------G-G-AU-GGGGAAC
CCCCCGAAGUGAAACAUCUCAGUAGGGG--GAGGAAGAGAAAUCAA-UUGAGAUUACGUU
AGU-AG-AGGCGAUCGAACCCGUA-A-UA-GUCUAAACUGAAUCCCG-------------
--------CA-AGGGACAUGUAGUG--UAU-------G-GC--CUUCGUU-----G----
---------------------UAGUAUGU-----------GU--UU-------AUCUA--
AUGA------AAGUAG-CUUG---------------------------------------
----GAAUG-GCUUA-------CCUUAGAGGGUGACAGUCCCGUA---------CGU---
G--GUGG------UAAACACA-GC------------------UUAGAAGUGUCCUGAGUA
GCGCGGGUUG---GAAUUCCCACGUGAA-UAUGGGGGUCACC---ACCUCCAAGACUAAA
UA--CUC-C-UCAAAACCGAUAGC-GAAA-U-AGUAGCGUGAGCGAAAA-CUGAAA-AGU
AU-CCCUGAAAAGGA-A-AUG-AAAAGUGCCUGAAACUAACCGGUGAUCG-UGUGU-UAC
G---GCGUGCAA-GGAU-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-UCCGAUC--G-------------------AA------AG-AA---
---C------CC------------------GUC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-GC------GG
--------UAGUAUGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------AUUGGU--U----
-------------GCCGA--CGUCGUAACUUACGUUUUGAAGAACGGGCCAAAGAGUGUA
-U-UCCGCUGGCGA-GGUUAACC-----------GGAA----------GGGCA--GCCGC
AGCGAAAG-CGACAA----------------------GCGCG-UAGUU------------
----------------------------------------------------UA------
------------------------------CCU-GGCGCG-GCGUAC-------------
----------------------UAAUA-------------------------GU-G-CGU
----------------------GGAGUCAACGGGAUAC-GACCUGAAACC-UGGUGAUCU
AUGCCUGAGCAGGUUGAAGCGUGCCGAAAG-GUGCGUGGAGGACCGC-AUGCGGUAUUGA
UAUGCAAAUCAUUCGCGUGACUUGGGUAUAGGAGUGAAAGAUUCAUCGAACCGGG-UGUC
AGCUGGUUCCUCUCGAAACAUGUCUAAGCAUGACCUCGA-CCGA----------------
------------------------------------------------------------
-GAAU-GAUAGUGAGGUAGAGC-ACCUAUUGGA-AAUC-CCGGGGA-A-GA-AA-UUCC-
U-CGCUUUCCUGUAAAACUCCAAACUCCCUA-----------------------------
------------------------------------------------------------
----------------------U-CU-U--UG-UAGACGUCGGGCAGUCCGG-G-CUAC-
G-GGG-UAAGCUUGUA-GUCCGUAAG-GGAGAC---AACCCAGACCAU-GGUUAAUGCCC
CCCAAU--GU-AGG-CU-AA---GU-GUCAACA-CUGAAUGAAGUCCUAGGUCAAAGACA
ACUGGAAGGUGAGCUCAGAAGCAGCUA-UCCUUUAAAAAGUGCGUAACAGCUUACCAGUC
-----AAGAUUUAGGGCGCAGAAAAU-GGAC-GGGGCUCA-AGCCUAC----------UG
CAGAU-ACCAUGGCGCACGUUU--------------------------------------
------------------------------------------------------------
--------------UUG-------------------------------------------
-----------------------------------------------------AACGUGA
UC-GAGUAGAGAGGC-GUCCUGU-A-U-GGGCU-GAAGCAG--G-GGUGUAAGUU--C-C
UGUGGACCGU-AUA-GGAAUGAGAAUUU-UGGCAG-UAGUA-GAAGCA-AAGAA-UGGUG
A--G---------------AAUCCA-UUC-CGCCGA-AGGGGC-UAGGUUUCC-UCGGCA
AUGUUCGUCAGCCGAGGGUUAGUCGG--UC-CUAAGCUGCAUCAU-AAG-UUGC---AUG
C-----------------------------------------------------------
-------------------------------------AGC-AA-A-AGGGA-AACAGGUU
-AAUA-UUCCUGUACCGGC----GUUA---------------------------------
------------------------------------------------------------
-------------------------------------AU-AUACU-GACGCAUCGGGUUA
UG-CAUAGCGGG-AC-------CGUC-----G-UCCCGU-CCAA-U-CGUAU-----A-A
-----AC-----UC----------------UUGG-AGU-A-CC-----------------
---GUAAU-GGUGAGAAUU-----GAGUGA----AAGCG-UGA-UG---GC---------
------------------------------------------------------------
-----------G-UA-A-GU-GUGU-A-A-ACACCUGGUGCCC-GUGAAA-A-GGUAAC-
------------------------------------------------------------
--GCAAUGUCCGUACCGAGAACCGACACAGGUGCCCCUAGUU-GAAAAGACUCAGGC-GU
GUCGGAAUUAUUUGUG-GUAAGGGAACUCGGC-AAAAUGGCUCCGUACCUUCGG-AACAA
GGAGUG-CCUG-C-CU--AGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GAUUAGGCA--GGUCGC
AGUGACCAGGGAGCUCUAA-----CUGUCUAACAACAACAUAGCAGACUGCAACUCCG--
--UA-A-------------GGACUAGU-AUAGUCUGUGA-AUCCUGCCCAGUGCGG-G-U
AUCUGAACACUGAU-------------UACA-------------AUCGGACGAAGGAC--
CCGUAAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCU-UA
AUUGGCGACUUGCAUGAAUGGAUUAAUAAGG--GCUCUACUGUCCCUACC----GCA-AA
UCCGUUGAACCUUUUAUCCUUGUGCAGAGGCAAGGGACUCCCAUCGGGAAGUGAAGA-CC
CCAUGGAGC-UUUACUGCAGCCUGUCGUUGACUUACGGUAUUACAUGCGCAGCGU-AGAU
AGUAGGUGUUA---AUGCUCA-UAU----------------------------UCCG---
-----------------------------------GU-AUGAGUGGAGCC-AC-AGUUGA
GACA-CUAUC-CUUGUUCUGCUGUAAUUCUCACUC-------------UUU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGGACA-UCGGUAGGUAGG
CAGUUUGGGUGGGGCGCCACACCCUCGA-AAAAAUAUC-AAGGGUGCCCUAUGGUCAACU
CAUGUGAGUCAGCAACUCACAGGA-GAGUGUCAAGAGCAU-AAGUUGGCUUGACG-UGAU
----------------------------------UUCGCAUAGCAAGAAAUCACGAGUGG
AAA-CACGGGUCUAACGAACCAAU-----------ACG---CCUUU-UUG----------
----------GUGAGGGCUAUUGACUACAG-AA--AAGCUACCCUGGGG-AUAACAGAGU
CGUCGCCGGCAAGAGCACAUAUCGACCCGGCGGCUUGCUACCUCGAUGUCGGUUCUUUCC
AUCCUGGCUGUGCAGCAGCAGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGGGAUCGUGA
GCUGGGUUCAGACCGUCGUGAGACAGGUCGGUUACUAUCUGAU-----------------
---G-GGA--------------------------------------GUGU-UCGAAAUCU
GAGAGCAAGA-AUGAAAUAGUACGAGAGGAA-CUUUCAUUCGUCACCUC-UGGUG-UAUC
GGUUGUCU-GAUA-AGGCAG-U-GCCGAGCAGCUACGUGGCA-CGAGAUAAAAACUGAAA
GCA-UC--UAAGUUUGAAACUUCGCUUGA-A-A-AGAGAUUUC-GU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UAUAGA----GCACCGGUAAAAGACCGGGU-UAAUAGGCU-UGGGAUGUACG-C
AC-G--------AAG-----GU----------AA--------CGACGUGUUUAGUCC--G
CAAGUACUAA-C--GCUCAA--------------
>Methanoculleus_marisnigri
---------------UAUGCCUAUC-AGUGGAUG-GCUCGGU-UCGA-G---UGCCGAAG
AAGGGCGUGC-CAAGCUGCGAUAAGCUCCGGGAAGACGCAUGGAGUCUA-----CGAUC-
CGG-AGAUUCCCUAAUGAGACU-UCUU--AA----CAC--------------UUCG----
--------------------G---UGUU-G-AUCC-------------------------
------GUAA------------------------------------G-G-AU-CGGGAAC
CCCCCGAAUUGAAACAUCUUAGUAGGGG--GAGGAAAAGAAAUCAA-CCGAGAUGUCGUU
AGU-AG-AGGCGAUCGAACACGAC-A-GA-GUUCAAACUGAAUCCCG-------------
--------CA-AGGGAGAUGUGGUG--UAG-------U-AA--GCCUACC-----A----
--U------------------CUGGAUGC-----------CA--AG-------GUCAA--
ACGG------AAAUCC-UCUG---------------------------------------
----GAAUG-AGGUG-------CCAAAGAGGGUGAUAGCCCCGUA---------CGU---
G--CAAG------CUGAGGUG-UC------------------CUGGUAGUGUCUUGAGUA
CCGCGGGUCG---GAAUUCUCGCGGGAA-UCUGGGGGUCAUC--AACCUCCAAAACUAAA
UA--CUA-C-UCGAAACCGAUAGC-GUAU-U-AGUAGCGUGAGCGAAGG-CUGAAA-AGU
AA-CCCUUGAAAGGU-G-GUU-AAAAGCGCCUGAAACUGAUAGGUGAUAG-UGAGU-UAC
G---GCGCGAAA-GGAU-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-UCCACGU--G-------------------AA------GG-AA---
---C------CC------------------GUC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-GC------GG
--------UAGUACGG--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------CGUGGU--U----
-------------GCCGG--UGUCGUAACGUACGUUUUGAAGAACGGGCCAGAGAGUUUA
-U-UCUGUAGGCGAAGGUUAACC----------CAAAA----------GGGGA--GCCGA
AGGGAAAC-CAACAG----------------------GUCCG-UAGCCUUC---------
---------------------------------------------------GGG------
------------------------------CAU-GGGACG-GCGUAU-------------
----------------------UAAAA-------------------------GU-G-CGU
----------------------GGAGUCUGCAGGAUAA-GACCCGAAGCC-UAGCGAUCU
AUGCGUGGGCAGGUUGAAGCGUGCCGAAAG-GCGCGUGGAGGACCGC-AAGCGGUUUUGA
UAUGCAAAUCAUUCGUGUGACCUGCGUAUAGGAGUGAAAGAUUAAUCGAGCUGGG-CAUC
CGCUGGUUCCUCUCGAAACAUGCCGUAGCAUGACCUGGC-UGGA----------------
------------------------------------------------------------
-GAUA-GACGGUGAGGUAGAGC-ACUGAUUGGG-GGAG-CUGGGGG-A-GA-AA-UCCC-
U-CACCCUCCUGUCAAACUCCAAAUUCCCCG-----------------------------
------------------------------------------------------------
----------------------U-CG-U--CG-AAGAAGGCUGGCAGUCCGG-A-CUAC-
G-GGG-UAAGCUUGUA-GUCCGUAAG-GGAGAC---AACCCAGACCGU-GGUUAAUGUCC
CUCAAU--GU-AGG-CU-AA---GU-GUCAACA-CUGAAAGGCGUCCCAGGCCAAAGACA
ACUGGAAGGUGAGCUCAGAAGCAGCUA-UCCUUUAAAAAGUGCGUAACAGCUUACCAGUC
-----GAGGUUUGGGGCACUGAAAAU-GGAC-GGGGCUAA-AGCCUAC----------UA
CAGAU-ACCACGGACCACACUU--------------------------------------
------------------------------------------------------------
--------------U---------------------------------------------
-----------------------------------------------------CGUGUGA
UG-GCGUAGAGAGGC-GUGCUGC-C-U-GGGCA-GAAGCAG--G-GGCGUGAGCU--C-C
UGUGGACCGG-GUA-GUAUUGAGAAUUC-UGGCAU-UAGUA-GAAGCA-AAGUU-GGGUG
A--G---------------AAUCCC-AAC-CGCCGG-AGGGGC-UAGGUUUCC-UCGGCA
AUGUUCGUCAGCCGAGGGUUAGUCGG--UC-CUAAGAUGUGUCGU-AAU-UCGA---GCA
C-----------------------------------------------------------
-------------------------------------GUC-AA-C-AGGGA-AACAGGUU
-AAUA-UUCCUGUACCAUU----CAUCCGUA-----------------------------
-----------------------------------------------GCAGUUU------
------------------------------------ACU-GCCCU-GACGCUUCGGGAUA
UG-CCGGGCAGG-GU-------CGUC-----G-CCCUGU-CCAA-G-CGUUC-----A-A
-----GC-----UC----------------GUGG-AGU-A-CC-----------------
---GCCAU-GGUGAGAAGC-----GAGUGA----AGGCG-UGA-UG---GA---------
------------------------------------------------------------
-----------G-UA-A-UU-CGGC-A-A-AUUCCUGGAGCCC-GUGAAA-A-GGGGGA-
------------------------------------------------------------
--UGAAUGUCCGUACCGAGAUCUGACACAGGUGCCCCUAGCU-GAAAAGGCUAAGGC-GU
GUCGGU-UUAAUCGUG-UUAAGGGAACUCGGC-AAAUUGGCCCCGUAACUUUGG-GAUAA
GGGGUG-CCUG-C-CU--GGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GAUCAGGCA--GGUCGC
AGUGACCAGGGGGCUCUGA-----CUGUCUAAUAACAACAUAGGUGACUGCAACUCGG--
--AA-A-------------CGACUAGU-AUAGUCACUGA-UUCCUGCCCAGUGCGA-G-U
AUCUGAACACCGGG-------------UUCA-------------ACCGGACGAAGGAC--
UCGUAAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCU-UA
AUUGGCGACUUGCAUGAAUGGAUUAACGAGA--GCCCUACUGUCCCUAAC----ACG-AA
GCCGUUGAACAUUUUAUCCUAGUGCAGAGACUAGGGACUCCAGAUGGGAAGUGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGUCGCUGUGUUACGGUAUUCCUUGCGCAGCGU-AGAU
GGGAGGCGUCG---AUCCACC-CCU----------------------------UCCG---
-----------------------------------GG-GGGUGGGGAGCC-AA-CAAUGA
GACA-CCAUC-CUUGGUUUACUGUAACACUAACUC-A----------AACC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------UGAGGACA-ACGAUAGGUAGG
CAGUUUGGGUGGGGCGCCACACCCUCGA-AAAAAUAUC-AAGGGUGCCCUAUGGUCAACU
CAUGUGAGUCAGAAACUCACAGGA-GAGUGUCAAGAGCAU-AAGUUGGCCUGACG-CGAU
----------------------------------UUCGCAUAGCAAGAAAUCGCGAGAGG
AAA-CUCGGGUCUAACGAACCAAU-----------GAG---CCUUA-UUG----------
----------AUGAGGGCCAUUGACGACAG-AA--AAGCUACCCCGGGG-AUAACAGAGU
CGUCGCCGGCAAGAGCACAUAUCGACCCGGCGGCUUGCUACCUCGAUGUCGGUUCUUUCC
AUCCUGGCCGUGCAGCAGCGGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGGGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUAUC-----------------
---U-GGA--------------------------------------GUGU-AAGGAGUCU
GAAGGUAAGA-UGGAAAUAGUACGAGAGGAA-CUUUCCGUCGUCGCCUC-UGGUC-GAUC
GGUUGUCC-GACA-GGGCAG-U-GCCGAGCAGCUACGCGAUA-AGGGAUAAAAGCUGAAA
GCA-UC--UAAGCUUGAAACCUGACCCGA-A-A-AGAGACUCC-GU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGG----ACACGGGUAAAAGACCCGCU-UGAUAGGUC-CGGGAUGUAAG-C
AC-G--------AAG-----GC----------AA--------CGACGUGUUCAGUCC--G
CGGAUACUAA-C--GUC-----------------
>Methanopyrus_kandleri
-CG---GGUCGG--CUAAGCCGUCG-GGUGGAUG-CCUUGGC-UCGG-G---CGCCGAGG
AAGGCCGUGG-CAAGCUGCGAUAAGCCCGGGCGAGGCGCAUGCAGCCGU-----GGAAC-
CCG-GGAUCGCCGAAUGGGACC-UCUC--GC----CGGGG-CC---------GAAA----
-----GG---U----C----C---CGGC-A-CUCC-GGG---GGGAA-ACCCCGGGCC--
------CUCGU--------------GGCCCGGGGGAGUAC-CC-CCG-G-AG-GGGGAAC
CCGCCGAACUGAAACAUCUUAGUAGGCG--GAGGAAAAGAAAGCAACACGCGAUGCCGUG
AGU-AG-GGGCGACCGAAAACGGC-A-GA-GGGCAAACUGAACACCCGCCCGA-------
-AAG---GGC-GGGUGGAUGUGGGG--UUG-------C-AG--GCCCGGG-----C----
--CGCCUAUGUG--------GCCGUCUCC-----------CC--CG-------GAACG--
GCCG------AAGUGC-CCUG---------------------------------------
----GAACG-GGCCG-------CCGGAGAGGGUGACAGCCCCGUA---------GGC---
C--GCCG------GGGGACGG-CCG-----------------CUGGCCCGGGCCUGAGUA
CCGUCGGUUG---GAUAUCCGGCGGGAA-UCUGGGGGACAUC--GGCCCCCAACCCUAAA
UA--CGU-C-CCGAGUCCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-CCCGG-AAGGGG-A-GUG-AAAAGAGCCUGAAACCCGACGGCGAUAG-UCUGC-CGG
G---GCCCGCAA-GGGAUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AA-GCCCCCC--G-------------------AA------GG-AA---
---A------CC------------------CCG---------------------------
------------------------------------------------------------
--------------------------------------GUGA------------------
------------------------------------------------------------
------------------------------------------------C-GG------GG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGGGGC-CG----
-------------ACCGG--GGUCCCGGCGUUCGUUUUGAAACACGAGGCGGGGAGUCCG
-C-GGCCGCGGCGA-GUCUAAGGGG--------UUCAA-------ACCCCGAA--GGCGU
AGGGAAAC-CGACAC----------------------GCCCG-CAGCCCGG---------
-----------------------------------------CCGUUAGGCCGGG------
------------------------------CCA-GGGGCG-GGGUCC-------------
----------------------UAAUA-------------------------GG-G-CCC
----------------------GCAGCCGCGGCCGCGG-GACCCGAAACC-GGCCGAUCU
AGCCCGGGGCAGGGUGAAGCGGCCCUAAAG-GGCCGUGGAGGCCCGC-UAGGGGUGCUGU
AGUGCAAAACGCUCCCGUGACCCCGGGCUAGGGGUGAAAGGCCAAUCGAGGCCGG-AGAC
AGCUGGUUCCCCCCGAAACGGCCCGCAGGUCGGCCCGGC-CGGA----------------
------------------------------------------------------------
-GGUA-GGUGGCGGGGUAGAGC-ACUGAUUCCC-CGGU-UAGGGGC-C-GA-GA-GGCC-
C-CGCCGGGGAGUCAAACUCCGAACCCGCCA-----------------------------
------------------------------------------------------------
----------------------C-CG-C--CG-UAGAAGGCCGG-AGUUGGG-G-CCGG-
C-GGG-UAAGCCGCCG-GUCUGAGAG-GGGAAU---AACCCAGACCGG-GGUUAAGGCCC
CAAAGU--GC-CGG-CU-AA---GU-GUUAAAU-AGAAAGGGAGUCCCCGGCCGAAGACA
GCGGGGAGGUAGGCUUAGAAGCAGCCA-UCCUUUAAAGAGUGCGUAACAGCUCACCCGUC
-----GAGGUCGGGGGCCCCGAAAAU-GGAC-GGGGCUGA-AGCCGGC----------CG
CCGAG-ACCCCGGGGCCGCGGG--------------------------------------
------------------------------------------------------------
--------------CCGAUG----------------------------------------
----------------------------------------------------GCCCGCGG
GC-CGGUAGGGGGGC-GCCCCGG-C-G-GCUCA-GAAGCCG--G-GCCGUGAGGU--C-C
GGUGGAGCCG-UCG-GGGACGAGAAUCC-CGCCGG-UAGUA-GCAGCA-AAGCG-GGGUG
A--G---------------AAUCCC-CGC-CGCCGG-AGGGGC-CAGGGUUCC-UCGGCA
AUGUUCGUCAGCCGAGGGUAAGUCGG--CC-CUAAGGCCGGCGGU-AAC-ACCG---ACC
G-----------------------------------------------------------
-------------------------------------GCC-GA-A-AGGGA-AACGGGUU
-AAUA-UUCCCGUACCGCG----GGGGUACG----C------------------------
-----------------------------------------------CCGG--CAAC---
-----GG-GA--AGC--------------------CCGG-CGGCC-GACGCCUCGGGGUA
GG-CCGGGCGGG-GC-------UGUC-----G-CCCCGU-CCAA-C-CGGUG-----A-A
-----GG-----CC----------------GGGG-AGU-C-CC-----------------
---GUAAU-GGGGAGAACC-----GGCCGA----AGCCG-GGA-AGG--GC---------
------------------------------------------------------------
-CGCCC-GUUAUGGGCGGUC-CGGC-C-G-AUCCCCGGGGCCC-GUGAAA-A-GGCCGCC
GGGAA--------------------------------------------------GGAUC
C-CCCGCGACCGUACCGAGAACCGACACAGGUGCCCCUGGGU-GAGAAGCCUAAGGC-GC
GGCGGG-GUAACCCGG-CCGAGGGAAAUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCCG-C-GG--CCCUGACCCCGAGGGUCGAACCUCGGGGGA------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GGGGCCGCG--GGUCGC
AGUGACUAGGGGGGGCCGA-----CUGUUUAAUAAAAACAUAGGUCCCGGCUAGCCCG--
--AA-A-------------GGGCUGGU-ACCGGGGCCGA-CGCCUGCCCAGUGCCG-G-U
ACGUGAAGCCCGGG-------------UACA-------------ACCGGGUGAAGCGC--
CGGUAAAC-GGCGGGGGUAACUAUAACCCUCUUAAGGUAGCGAAAUGCCUUGCCGGU-UA
AGUACCGGCUUGCAUGAAUGGCGUAACGAGC--CCCCCACUGUCCCCGGC----CGG-GA
CCCGGUGAACCCGCCAUCCCCGUGCAGAGGCGGGGGACCCCCGGCGGGAAGCGAAGA-CC
CCGUGGAGC-UUUACCGCAGCCUGCCGUUGGGGCACGGCUGCGGGUGUAUAGCGU-AGGU
GGGAGCCGUUACUCAGGGGCG-GCC----------------------------GCCA---
-----------------------------------GGCCGUCCCCGAGGC-GC-CCAUGG
AACA-CCACC-CUCCCGCGGCUGUGCCCCUAACCC-GG--GCC--G-AGAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------G----GC--------------------
--------------------------------------CCGGGGACA-GCGGUUGGUGGG
CGGUUUGGCUGGGGCGGCACGCCCCCGA-GAAGGCAUC-GGGGGCGCCCAAAGGUCGGCU
CAGGCGGGUCAGAAAUCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACU-GGGU
----------------------------------CCCGCACAAUAAGGGACCCAGGCGGG
AAA-CCGUGGCCUAGCGAACCCCG-----------GUG---CCGCC-CCG----------
----------GUGGCGGCCCGGGAUGACAG-AA--AAGCUACCCCGGGG-AUAACAGGGU
GGUCGCGGGCAAGAGCCCACAUCGACCCCGCGGCUUGCUACCUCGAUGUCGGCUCUCCCC
AUCCUGGCGGUGCAGCAGCCGCCAAGGGUGGGGUUGUUCGCCCAUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUCGCUAUCUGCC-----------------
---G-GGG--------------------------------------GUGU-UGGCCGCCU
GAGGGGAAGG-ACCGCCUAGUACGAGAGGAA-CGGCGGUCCGCGGCCUC-UGGUG-GACC
GGCUGUCC-GGCA-GGGCA--A-GCCGGGUAGCUACGCCGUA-UCCGAUAAGGGCUGAAA
GCA-UC--CAGGCCCGAAGCGGUCCCCGA-A-AAUAGGCGGCC-GU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UG-AGG----CCUCGGGUAAAAGACCCGGU-UGAUGGGGC-GGGGGUGUAAG-G
CC-C--------AAG-----GGGCCGUUGGGCCC--------CGAGGGCCUGAGCCC--A
CCGCUCCCAAUC--GGCCGAUGG-ACCCGGC---
>Methanoregula_boonei
---------------UAAACCUACC-AGUGGAUG-GCUCGGU-UCAA-G---UGCCGAAG
AAGGGCGUGC-CAAGCUGCGAUAAGCUCCGGGUAGACGCAAGGAAUCUA-----UGAUC-
CGG-AGAUGCCCUAAUAGGACA-UCCU--GA----CGCU--------------UUA----
---------------U----G---CGUC-U-UUCC-------------------------
------GUAA------------------------------------G-G-AA-AGGGAAC
GCCCCGAAUUGAAACAUCUCAGUAGGGG--CAGGAGAAGAAAUCAA-CCGAGAUGUCGUU
AGU-AG-AGGCGAUCGAACACGAC-A-GA-GCUCAAACCGAAUCCCG-------------
--------CA-AGGGAGAUGUGGUG--UUA-------U-AA--GCCCACC-----G----
--U------------------ACGAUGCC-----------GG--AU-------GUGAA--
GCGG------AAGUUG-CCUG---------------------------------------
----GAAGG-GCACA-------CUACAGAGGGUGAAAGUCCCGUA---------CGC---
A--GAAG------CAGACGGU-GU------------------UAGGUGGUGUCUUGAGUA
CCGCGGGUUG---GAAUUCUCGCGGGAA-UUCAGGGGUCAUC--AACCCCUAAAGCUAAA
UA--CAC-C-UUGAAACCGAUAGC-GAAU-U-AGUAGCGUGAGCGAAAG-CUGAAA-AGU
AA-CCCUGAAAAGGU-G-GUU-AAAAGUGCCUGAAAUUGGUAGGUGAUCG-CGGGU-UGC
G---GCAUGAAA-GGAU-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-UCCUUAU--G-------------------AA------GG-AA---
---C------CC------------------GUC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-GC------GG
--------UAGUACGG--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UAAGGU--U----
-------------GCCAG--UGUCGCAACGUACGUUUUGAAGAACGGGCCAGAGAGUUUA
-U-UCUGUUGGCGAAGGUUAACC----------CACAA----------GGGGA--GCCAU
AGGGAAAC-CAACAA----------------------GUCCG-UAGCAGCA---------
---------------------------------------------------AUG------
------------------------------CGU-GGGACG-GCGUAU-------------
----------------------UAAA--------------------------GU-G-CGU
----------------------GGAGUCAGCAGGAUAA-GACCCGAAGCC-GAGUGAUCU
AUGCGUUGGCAGGUUGAAGCGUGACGAAAG-UUGCGUGGAGGACCGC-AAGCCGUAUUGA
UAUGCAAAUCAUUGGUGUGACCUACGUAUAGGAGUGAAAGAUUAAUCGAACCCGG-CAUC
AGCUGGUUCCUCCCUAAACAUGUCGCAGCAUGACCUAAC-CGGA----------------
------------------------------------------------------------
-GAUA-GUCGGUGAGGUAGAGC-ACUGAUUGGG-GGAG-CUGGGCG-G-GA-AA-CUGC-
U-CACCCCCCUGUCAAACUCCAAACUCCCCG-----------------------------
------------------------------------------------------------
----------------------A-CA-U--CC-UAGAUGGUUGGAAGUCCGC-A-UUAC-
G-GGG-UAAGCUUGUA-AUGCGUAAG-GGAAAC---AACCCAGACCGU-GGUUAAUGUCC
CUCAAU--GU-AGG-CU-CA---GU-GUCAACA-CUGAAAUUGGUCCUAGGUCAAAGACA
ACUGGAAGGUGAGCUCAGAAGCAGCUA-UCCUUUAAAAAGUGCGUAACAGCUUACCAGUC
-----AAGAUUUAGGGCGGUGAAAAU-GGAC-GGGGCUAA-AGCCUAC----------UA
CAGAG-ACCACGGAGCACCGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGUGA
UC-UGGUAGGGAGGC-GCUCUGC-G-U-GGGUA-GAAGCUG--G-GGCGUGAGUU--C-C
AGUGGACCGC-GUA-GUGAUGAGAAUUC-UGGCAG-UAGUA-GAAGCA-UAGUU-GGGUG
A--G---------------AAUCCC-AAC-CGCCGC-AGGGGC-UAGGUUUCC-UCGGCA
ACGUUCGUCAGCCGAGGGUUAGUCGG--UC-CUAAGGUGCGUCGU-AAC-UCGA---ACG
U-----------------------------------------------------------
-------------------------------------ACC-GA-A-UGGGA-AACAGGUU
-AAUA-UUCCUGUACCAUG----UGGUUUUA----A------------------------
-----------------------------------------------GUC----------
--------------G--------------------CAAG-ACCCU-GACGCUUUGGGAUA
UG-CUCAGCGGG-AC-------UGUC-----A-UCCCGU-CCAA-G-CACAU-----A-A
-----AC-----UG----------------GUGG-AGU-A-CC-----------------
---GUAAU-GGUGAGAAUC-----CGGUGA----AAGUG-UGA-UG---GG---------
------------------------------------------------------------
-----------G-UA-A-CU-AAGC-A-A-AUUCCUUGAGCCC-AUGAAA-A-GGGAAU-
------------------------------------------------------------
--CACAUGUCCGUACCGAGAACCGACACAGGUGCCCCUCGCU-GAAGAGGUGUAGGC-GU
GUCGGA-UUUAAUCGG-UUAAGGGAACUCGGC-AAAUUGGCCCCGUAACUUUGG-GAUAA
GGGGUG-CCUG-C-CU--GGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GAUCAGGCA--GGUCGC
AGUGACCGGGGCGCACUAA-----CUGUCUAAUAACAACAUAGGUGACUGCAACUCCG--
--AA-A-------------GGACUAGU-AUAGUCACUGA-UUCCUGCCCAGUGCGA-G-U
AUCUGAAUACCGGG-------------UUCA-------------ACCGGACGAAGGAC--
UCGUAAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCU-UA
AUUGGCGACUUGCAUGAAUGGAUUAAUGAGU--GCGCUACUGUCCCUAAC----ACG-AA
UCCGUUGAACCUUUUGUUCUAGUGCAGAGACUAGAGACUCCUGAUGGGAAGUGAAGA-CC
CCGUUGAGC-UUUACUGCAGCCUGUCGUUGAAUUACGAUAAUUCUUGCGCAGUGU-AGAU
GGGAGGCGUUA---UAUCCAU-UGC----------------------------UUUG---
-----------------------------------GU--AAUGGGGAGCC-AA-UGAUGA
GACA-CCAUC-CUAGUUUUGUUGUAGUUCUCACUC------------UAAC---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------GAGGACA-CCGGUAGGUGGG
CAGUUUGGGUGGGGCGCCACACCCUCGA-AAAAAUAUC-AAGGGUGCCCCAAGGUCAACU
CAUGUGAGUCAGAAACUCACAGAA-GAGUGUCAAGAGCAU-AAGUUGGCCUGACG-CGAU
----------------------------------CACGCAUAGCAAGUGAUCGCGAGAGG
AAA-CUCGGGUCUAACGAACCAAU-----------AUA---GCCUU-UUG----------
----------GUGAGGCUUAUUGACUACAG-AA--AAGCUACCACGGGG-AUAACAGAGU
CGUCGCCGGCAAGAGCACAUAUCGACCCGGCGGCUUGCUACCUCGAUGUCGGUUCUUUCC
AUCCUGGCUGUGCAGCAGCAGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGGGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUAUC-----------------
---A-GGA--------------------------------------GUGU-UAGAAGUCU
GAAGGUAAGA-AUGAAAUAGUACGAGAGGAA-CUUUCAUUCGGCGCCUC-UAGUC-GAUC
GGUUGUCU-GACA-AGGCAG-U-GCCGAGCAGCCACGCGCCA-AGGGAUAAAAGCUGAAA
GCA-UC--UAAGCUUGAAACCCGGCCUAA-A-A-AGAGACUUC-GU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UACAGG----ACAUGGGUAAAAGACCCGUU-UGAUAGGCU-UCGGAUGUACG-C
AC-G--------AAG-----GC----------AA--------CGACGUGUUCAGUCC--G
GAAGUACUAA-C--GUCCAAACA-----------
>Methanosaeta_thermophila
---------------UAUGCCAGCC-GGGGGAUG-GCUCGGC-UCGA-G---CGCUGAUG
AAGGGCGUGC-CAAGCUGCGAUAAGCCCCGGCGAGGCGCAGGGAGCCUU-----UGAAC-
CGG-GGAUGCCCUAAUGGGAAA-UCCC--AG----UU----------------UCA----
------------------------UGCU-G-AUCC-------------------------
------GUAA------------------------------------G-G-AU-CGGGAAC
GCCCCGGAUUGAAACAUCUUAGUAGGGG--CAGGAGAAGAAAUCAAAACGAGAUGCCGUC
AGU-AA-CGGCGAGUGAACGCGGC-A-GA-GCCCAAACCGAAUCCCG-------------
--------AA-AGGGAGAUGUGGUG--UGA-------U-AA--GACCGCU-----C----
--AU----------------AACGGUCUG-----------GC--AA-------GGGAA--
UCCG------AAGUGG-CCUG---------------------------------------
----GAACG-GCCCG-------CCAAAGAGUGUGAUAGCCACGUA---------GGA---
G--CAAC------CAAGCCGG-AUC-----------------CGAGCGGCGUCUUGAGUA
CCGUGAGUCG---GAUAUCUCGCGGGAA-GUUGGGGGUCACC--AACCUCCAAGGCUAAA
UA--CGU-C-UCGAGACCGAUAGC-GCAG-U-AGUAGGGUGACCUAAAG-CUGAAA-AGA
AC-CCUGGAUAGGGG-U-GUG-AAAAGAGCCUGAAAUCGGCUGGCGAUGG-UGCGU-CAC
G---GCAUGUGA-GGAC-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-UCAGGCC--G-------------------AA------GG-AG---
---G------UC------------------GUC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-GC------GA
--------CAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GCCUGA--U----
-------------GCCGG--UGUCGUGACUUACGUUUUGAAGAACGGACCAAGGAGUGCA
-U-CUGGCUGGCAA-GGUUAAUCUC---------GAAA--------GAGAGUA--GCCGA
AGCGAAAG-CGACAU----------------------GCGCG-CAUCGA-----------
--------------------------------------------------UGAG------
------------------------------AGA-GGCGCG-GCGUAU-------------
----------------------GAAA--------------------------GU-G-CGC
----------------------GGAGUCAGCUGGAUGC-GACCCGAAGCC-GGGCGAUCU
AGGCGUGGGCAGGUUGAAGCGUGGCGAAAG-CUGCGUGGAGGACCGC-UAGCGGUGCUGA
UAUGCAAAUCGCUCGCGUGACCUGCGUCUAGGGGUGAAAGUCCAAUCGAGCCCGG-AAAU
AGCUGGUUCCUCCCGAAACAUGUCGCAGCAUGACCUGGC-CGGA----------------
------------------------------------------------------------
-GGCA-GUCGGCGGAGUAGAGC-ACUGAUUGGG-GAUC-CCGGGCG-G-GA-AA-CCGC-
U-CGCUCUCCUGUCAAACUCCCAACACGCCG-----------------------------
------------------------------------------------------------
----------------------U-CG-C--CU-UAGAUGGCCGGAAGUCCGG-G-CUGG-
U-GGG-UAAGCUACUA-GUCCGUGAG-GGAGAC---AACCCAGACCGU-GGUUAAGGUCC
CAAAAU--GU-CGG-CU-AA---GU-GUUAACA-CUGAAGGGCGUCCUAGACCUAAGACA
ACUGGGAGGUUAGCUUAGAAGCAGCUA-CCCUUUAAAGAGUGCGUAACAGCUCACCAGUC
-----GAGGCCUAGGGCCCCGAAAAU-GGAC-GGGGCU-A-AGCCGAC----------UA
CCGAU-ACCACGGAGCGCCGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGCGA
UC-UGGUAGGGAGGC-GCCGCGC-G-U-GGGUG-GAAGCAA--C-UCCGUGAGGA--G-U
CGUGGACCAC-GCG-GGGACGAAAAUCU-UGGUAG-CAGUA-GCAGCA-AAGUC-GGGUG
A--G---------------AAUCCC-GAC-CGCCGU-AAGGGC-CAGGGUUCC-UGGGCA
ACGAUCGUCAGCCCAGGGUUAGUCGG--UC-CUAAGGUGUGCCGU-AAC-UCGA---GCA
C-----------------------------------------------------------
-------------------------------------AUC-AA-A-UGGGA-AACAGGUU
-AAUA-UUCCUGUACCUAC----CGGC---------------------------------
------------------------------------------------------------
-----------------------------------ACUA-AAACC-GACGCUUCCGGAUA
GC-CUGA-CACC-CG-------CGCC-----A-GGGUGC-UCAA-G-CGCCG-----A-A
-----GU-----CC----------------GCGG-AGA-G-CC-----------------
---GUCAU-GGCGAGAAAC-----GGACGA----AUGCG-UGA-UG---AC---------
------------------------------------------------------------
-----------G-CA-A-GC-AGGC-A-A-AUUCCGGGAGCCC-GUGAAA-A-GGGAG--
------------------------------------------------------------
--CCGGAGGCCGUACCGAGAACCAACACUGGUGCCCCGAGCU-AAGAAGGCUCAGGC-GU
GUCGGAAGUAAUCCGG-CUAAGGGAAUUCGGC-AAAUUAGCCACGUAACUUCGG-GAUAA
GUGGUG-CCUG-C-UU--CGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------AAGAAGCA--GGUCGC
AGUGACGAGGGGGCUCUGA-----CUGUCUAAUAACAACAUAGGUGGUUGCAGACCCG--
--AA-A-------------GGGCAAGU-ACAACCACUGA-AUCCUGCCCAGUGCGG-G-U
ACCUGAAAACCCGG-------------UACA-------------ACGGGAAGAAGGGC--
CCGUCAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGCCGCU-UA
AUUGGCGGCUCGCAUGAAUGGAUCAACGAGA--GCCCCACUGUCCCUAGC----CGG-AA
CCCGGUGAACCUUACGUCCCAGUGCAGAGUCUGGGGACCCCUGAUGGGAAGUGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGCCGCUGGGUUGUGGUUCUGGAUGUAGAGCAU-AGGU
AGGAGGCGUCG---AAACCCG-GGC----------------------------GCCA---
-----------------------------------GC-UCGGGCGGAGCC-AC-CACUGG
AAUA-CUACC-CUUCUGGAACUACCACCCUAACUC-C----------GAAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAGGACA-CCGGUAGGUGGG
CAGUUUGGGUGGGGCGCCACUCCCUAGA-AAAGAUAUC-UAGGGAGCCCUAAGGUCGACU
CAGUUGGGUCGGAAACCCAACAAA-GAGUG-UAAAAGCAU-AAGUCGGCCUGACG-UCAU
----------------------------------CCCGCAUAGCAAAGGAUGACGAGACG
AAA-GUCGGGUUUAGCGAACCUCU-----------CAG---CCCCC-UUG----------
----------GUGGGGGCGUUAGAUGACAG-AA--AAGCUACCCCGGGG-AUAACAGAGU
CGUCACCGGCAAGAGCACAUAUCGACCCGGUGGCUUGCUACCUCGAUGUCGGUUCUCUCC
AUCCUGGCCGUGCAGCAGCGGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUGUC-----------------
---A-GGG--------------------------------------GUGCUUCGCGGUCU
GAGGGCAGGC-UGGCUUUAGUACGAGAGGAA-CAAGCCAGCGGCGCCAC-UGGUC-GAUC
GGUUGUCU-GGCA-AGGCAC-G-GCCGAGCAGCUACGCGCCACAGGGAUAAGGGCUGAAA
GCA-UC--UAAGCCCGAAACCCAACCCGA-A-A-AGAGACCGC-UC--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------CA-AGG----GCCCUCGUAAAAGACGAGUU-CGAUAGAGU-CGGGGUGUACG-C
AC-C--------AAG-----GC----------AA--------CGAGGUGCUCAGCCC--G
CGACCACUAACC--GCC-----------------
>Methanosarcina_acetivorans
-------AGGAA--UUAUGCUAUCA-GGUGGAUG-GCUCGGC-UCAA-G---AGCUUAUG
AAGGACGUGC-CAAGCUGCGAUAAGCCCGGGGUAGGUGCAUGGAGCCAA-----UGAAC-
CCG-GGAUUUCCGAAUGGGACC-UCU---CC----------------------GUA----
--------------------------GU-G-AUCA-------------------------
------UUCA------------------------------------U-G-AU-CGGGAAC
GCUCCGAAUUGAAACAUCUCAGUAGGAG--CGGGAAAAGAAAUCAA-UUGAGAUGCCGUA
AGU-AA-CGGCGAGUGAAACCGGC-A-CA-GUUCAAACCGAAUCCCU-------------
--------UC-GGGGACAUGUGGUG--UUG-------U-AG--GGCUGUU-----C----
---------------------AAACGUCU-----------GG--CG-------GUAAA--
AUCG------AACUUG-CCUG---------------------------------------
----GAACG-GCAGA-------CCAUAGAGUGUGACAGUCACUUA---------GAU---
G--UACG------CCAAAAGA-CC------------------GGAACAUGUCCCUGAGUA
CCGUGCGUUG---GAUAUCGUGCGUGAA-UCUGGGGGGCACC--AACCUCCAAAACUAAA
UA--CUC-C-UUGAGACCGAUAGC-GAAA-U-AGUAGGGUGACCGAACG-CUGAAA-AGU
AC-CCCGAGAAGGGA-G-GUG-CAAAGUGCCUGAAACCUGAUAGUGAUGG-AACGA-UAC
G---GCAUGAAA-GGAU-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-CUGGCAU--G-------------------AA------GG-AA---
---U------CA------------------UUC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-GA------UG
--------UAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------A-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UGUCAC--U----
-------------GCCAG--UGUCGUAUCUUACGUUUUGAAGAACGGGCCAGGGAGUGUA
-U-CUUGGUGGCAAUGGCUAACCUU---------UUAU--------CUGGGCA--GCCGA
AGCGAAAG-CAACAU----------------------GUGCG-CAGCCUUU---------
---------------------------------------------------UGG------
------------------------------CGA-GGCACG-ACGUAU-------------
----------------------ACAA--------------------------GU-G-CGU
----------------------GGAGUCACCGGGGUAC-GACCCGAAGCC-GGGUGAUCU
AGGCGUGGGCAGGUUGAAGCGUGGCGAAAG-CUACGUGGAGGACCGU-AAACGGUAUUGA
UCUGCAAAUCAUUCGUGUGACCUGCGUCUCGUAGUGAAAUGCUAAUCUAACCCGG-CAUC
CGCUGGUUCCUUCCGAAACAUGUCGCAGCAUGACCUGAC-UUGA----------------
------------------------------------------------------------
-GAUC-GUCGGUGGAGUAGAGC-ACUGAUUGGC-GAUU-CCGGGGG-A-GA-AA-UCCC-
U-CGCUCGCUUGUCAAACUCCAAACCCCCCG-----------------------------
------------------------------------------------------------
----------------------U-CA-U--CC-UAGAAAGUCGG-AGUCCGG-A-CUGCU
G-GGG-UAAGCUUGUA-GUCCGUAAG-GGAGAC---AACCCAGCCCGU-GGUUAAGGUCC
CCAAGU--GU-CGA-CU-AA---GU-GUUAAUA-CUAAAGGGCGUCCCAAGCCCCAGACA
GCUGGAAGGUUAGCUUAGAAGCAGCUA-CCCUUCAAAGAGUGCGUAACAGCUCACCAGUC
-----GAGGUUUGGGGCCCCGAAAAU-UGAC-GGGGCUCA-AGUCGAC----------CA
CCGAU-ACCACGGAGUACCGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGUAA
UC-UCGUAGGAAGGC-GUUGUGU-U-C-GGGUC-GAAGCAG--G-GCUGUGAAGU--C-C
UGUGGACCGU-UCA-CAAACGAAAAUCC-UGGUAA-UAGUA-GCAGCA-AAGCA-GGGUG
A--G---------------ACUCCC-UGC-CGCCGA-AGGGGC-CAGGUUUCC-UCGGCA
AUGUUCGUCAGCCGAGGGUUAGUCGG--UC-CUAAGACGUACCGU-AAU-UCGA---GUA
C-----------------------------------------------------------
-------------------------------------GCC-GA-A-AGGGA-AACAGGUU
-AAUA-UUCCUGUACCAUU----UAGC---------------------------------
------------------------------------------------------------
-----------------------------------GUUU-AGUCU-GACGUCUCAGGGCA
AG-CCGAGCGGC-GU-------CGUC-----G-CGCCGU-CUAA-G-CAGCG-----A-A
-----CC-----CC----------------GUGG-AGA-G-CC-----------------
---GUAAU-GGCGAGAAGC-----GGGCGA----AUCUG-UAA-UG---GC---------
------------------------------------------------------------
-----------A-CA-A-GU-CGGC-U-U-CACCCCGGGACCC-GUGAAA-A-GGACAGC
------------------------------------------------------------
--UAAAUGUCCGUACCGAGAACUGACACAGGUGCCCCUAGCU-GAAAAGGCUAAGGC-GU
GUCGGA-GUAAUUCAG-UUAAGGGAAUUCGGC-AAAUUAGCUCCGUAACUUCGG-GAUAA
GGAGUG-CCUG-C-UG--UGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------AGACAGCA--GGUCGC
AGUGACCAGGGGGCUCUAA-----CUGUCUAAUACCAACAUAGGAGAUUGCAAACCCG--
--UA-A-------------GGGCUAGU-ACAAUCUCUGA-AUCCUGCUCAGUGCAG-G-U
ACCUGAAACCCCGG-------------UUCA-------------ACGGGAAGAAGGGC--
CUGUAAAC-AGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCU-UA
AUUGGCGACUUGCAUGAAUGGAUCAAUGAGA--GCCCUACUGUCCCUAAC----UGG-AG
UCCGGUGAAGCUUACAUUCUAGUGCACAGUCUAGAGACCUCUAGGGGGAAGUGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGUCGUUGGGUUGUGGUUCUGGAUGUACAGUGU-AGGU
AGGAGGCAUCG---AAGCGGG-UGC----------------------------GCCA---
-----------------------------------GC-AUUCGUGGAGCC-GU-CCUUGG
GACA-CUACC-CUUCCGGGACUACGACCCUAACUC-U----------GAGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------AGAGGACC-CCGAUAGGUGGG
CAGUUUGCCUGGGGCGGGACGCCCUUGA-AAAGAUAUC-AAGGGCGCGCAAUGGUUGACU
CAAGCGGGUCGGAAACUCGCUGAA-GAGUG-CAAGAGCAU-AAGUCAGCCUGACG-UUAU
----------------------------------UCAGCACAGCAGUGGAUGACGAGACG
AAA-GUCGGCUCUAGCGAACUUUU-----------GAG---CCUCC-UUG----------
----------GUGGGGGCCAAAAAUGACAG-AA--AAGUUACCCCGGGG-AUAAUUGAGU
CGUUGCCGGCAAGAGUACAUAUCGACCCGGCAGCUUGCUACCUCGAUGUCGGUUCUUUCC
AUCCUGGCCGUGCAGCAGCGGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUACU-----------------
---A-GAG--------------------------------------GUGC-CCGAGGUCU
GCGGGUAAGC-UGCUUUUAGUACGAGAGGAA-CCAAGCAGCGGCGCCAC-UGGUG-UACC
GGUUGUCC-GACA-GGGCAU-C-GCCGGGCAGCUACGCGCUC-AGGAAUAAGAGCUGAAU
GCA-UC--UAAGCUCGAACUCUGACCUAA-A-A-AGAGACCUC-UU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UA-AGG----AUUCCGGUAAAAGACCGGUU-UGAUAGAAA-CGGGAUGUAAG-C
AC-C--------AAG-----GC----------AA--------CGAGGUGUUCAGUCC--G
CGUUUACUAACC--AUUCGUUCC-UUUCACUU--
>Methanosarcina_barkeri
---------GAA--UUAUGCUAUCA-GGUGGAUG-GCUCGGC-UCAA-G---AGCUGAUG
AAGGACGUGC-CAAGCUGCGAUAAGCCCGGGGUAGGUGCAAGGAGCCUA-----UGAAC-
CCG-GGAUUUCCGAAUGGGACC-UCU---CC----------------------AUA----
--------------------------GU-G-AUCA-------------------------
------GUAA------------------------------------U-G-AU-CGGGAAC
GCUCCGAAUUGAAACAUCUCAGUAGGAG--CAGGAAAAGAAAUCAA-CCGAGAUACCGUG
AGU-AA-CGGCGAGUGAAAACGGC-A-CA-GUUCAAACCGAAUCCCU-------------
---U---CAC-AGGGAAAUGUGGUG--UUG-------U-AG--GGCUGUU-----C----
---------------------AAACGUCU-----------GG--CG-------GCUAA--
ACAG------AACUUG-CCUG---------------------------------------
----AAACG-GCAGA-------CCGUAGAGUGUGACAGUCACGUA---------UGU---
G--UAAA------CCAAAAGA-UC------------------GGAACAUGUCCCUGAGUA
CCGUGCGUUG---GAUAUCGUGCGGGAA-UCUGGGGGGCACC--AACCUCCAAAACUAAA
UA--CUA-C-UUGAGACCGAUAGC-GAAA-U-AGUAGGGUGACCGAACG-CUGAAA-AGU
AC-CCCGAGAAGGGA-G-GUG-CAAAGUGCCUGAAACCUGAUAGUGAUGG-AACGA-UAC
G---GCAUUAAA-GGAA-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-CUGACAU--G-------------------AA------GG-AA---
---A------CA------------------UUC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-AA------UG
--------CUGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------A-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UGUCAC--U----
-------------GCCAG--UGUCGUAUCUUACGUUUUGAAGAACGGGCCAGGGAGUUUA
-U-CUCAGUGGCAAUGGCUAACCU---------UUAUU---------UGGGCA--GCCGA
AGCGAAAG-CAACAU----------------------GUGCG-CAGCUCUC---------
--------------------------------------------------CGAG------
------------------------------CGA-GGCACG-ACGUAU-------------
----------------------ACAA--------------------------GU-G-CGU
----------------------GGAGUCACUGGGGUAA-GACCCGAAGCC-GGGUGAUCU
AGGCGUGGGCAGGUUGAAGCGUGGCGAAAG-CUACGUGGAGGACCGC-AAGCGGUAUUGA
UCUGCAAAUCAUUCGUGUGACCUGCGUCUCGUAGUGAAAUGCUAAUCUAACCCGG-CAUC
CGCUGGUUCCUUCCAAAACAUGUCGCAGCAUGACCUGAC-UGGA----------------
------------------------------------------------------------
-GAUC-GUCGGUGGAGUAGAGC-ACUGAUUGGC-GAUU-CCGGGGG-G-GA-AA-CUCC-
U-CGCUCGCCUGUCAAACUCCAAACCCACCG-----------------------------
------------------------------------------------------------
----------------------U-CA-U--UG-UAGAAAGUCGG-AGUCCGG-A-CUGCU
G-GGG-UAAGCUUGUA-GUCCGUAAG-GGAGAC---AACCCAUCCCGU-GGUUAAGGUCC
CCAAGU--GU-CGA-CU-AA---GU-GUUAAUA-CUAAAGGGCGUCCCAAGCCCAAGACA
GCUGGAAGGUUAGCUUAGAAGCAGCUA-CCCUUUAAAGAGUGCGUAACAGCUCACCAGUC
-----GAGGUUUGGGGCCCCGAAAAU-UGAC-GGGGCUCA-AGUCGAC----------CA
CCGAU-ACCACGGAGUACCGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGUAA
UC-UCGUAGGAAGGC-GUUGCGU-U-C-GGGCC-GAAGCAG--G-GCUGUAAAGU--C-C
UGUGGACCGU-UCG-CAAACGAAAAUCC-UGGUAA-UAGUA-GCAGCA-AAGCA-GGGUG
A--G---------------AAUCCC-UGC-CGCCGA-AGGGGC-CAGGUUUCC-UCGGCA
AUGAUCGUCAGCCGAGGGUUAGUCGG--UC-CUAAGACGUACCGU-AAC-UCGA---GUA
C-----------------------------------------------------------
-------------------------------------GCC-GA-A-AGGGA-AACAGGUU
-AAUA-UUCCUGUACCAUU----UAGC---------------------------------
------------------------------------------------------------
-----------------------------------AAUC-CGUCU-GACGUCUCUGGGCA
GA-CCGAGCGGC-GU-------CGUC-----G-CGCCGU-CUAA-G-CAGCG-----A-A
-----CC-----CC----------------GUGG-AGA-G-CC-----------------
---GUAAU-GGCGAGAAUC-----GGGCGA----AUCUG-UUA-UG---GC---------
------------------------------------------------------------
-----------U-AA-A-GU-CGGU-C-G-CACCCCGGGACCC-GUGAAA-A-GGCCGC-
------------------------------------------------------------
--UAAAUGUCCGUACCAAGAUCUGACACUGGUGCCCCUAGCU-GAAAAGGCUAAGGC-GU
GUCGGA-GUACUUCAG-UUAAGGGAAUUCGGC-AAAUUAGCUCCGUAACUUCGG-GAUAA
GGAGUG-CCUG-C-UG--UGG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------AGACAGCA--GGUCGC
AGUGACCAGGGGGCUCUAA-----CUGUCUAAUACCAACAUAGGAGAUUGCAAACCCG--
--UA-A-------------GGGCUAGU-ACAAUCUCUGA-AUCCUGCUCAGUGCAG-G-U
ACCUGAAACCCCGU-------------UUCA-------------ACGGGACGAAGGGC--
CUGUAAAC-AGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCU-UA
AUUGGCGACUUGCAUGAAUGGAUCAAUGAGA--GCCCUACUGUCCCUAAC----UGG-AA
UCCGGUGAAGCUUACAUUCUAGUGCACAGUCUAGAGACCUCUAGGGGGAAGUGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGUCGCUGGGUUGUGGUUCUGGAUGUACAGAGU-AGGU
AGGAGGCAUCG---AAGCGUA-UGC----------------------------GCCA---
-----------------------------------GC-AUACGUGGAGCC-GC-AAUUGG
GACA-CUACC-CUUCUGGGACUACGACCCUAACUC-U----------GAGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------AGAGGACC-CCGAUAGGUGGG
CAGUUUGCCUGGGGCGGGACGCCCUUGA-AAAGAUAUC-AAGGGCGCGCAAUGGUUGACU
CAAGCGGGUCGGAAACUCGCUGAA-GAGUG-CAAGAGCAU-AAGUCAGCCUGACG-UUAU
----------------------------------UCAGCAUAGCAGUGGAUGACGAGACG
AAA-GUCGGCUCUAGCGAACUUUU-----------GAG---CCUCC-UUG----------
----------GUGGGGGCCAAAAAUGACAG-AA--AAGUUACCCCGGGG-AUAAUUGAGU
CGUUGCCGGCAAGAGUACAUAUCGACCCGGCAGCUUGCUACCUCGAUGUCGGUUCUUUCC
AUCCUGGCCGUGCAGCAGCGGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUACU-----------------
---A-GAG--------------------------------------GUGC-ACGAGGUCU
GCGGGUAAGC-UGCUUUUAGUACGAGAGGAA-CCAAGCAGCGGCGCCAC-UGGUG-UACC
GGUUGUCU-GACA-AGGCAU-A-GCCGGGCAGCUACGCGCCA-AAGAAUAAGAGCUGAAU
GCA-UC--UAAGCUCGAACUCUCACCUAA-A-A-AGAGACCUC-AU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UA-AGG----AUUCCGGUAGAAGACCGGUU-UGAUAGAAA-CGGGAUGUAAG-C
AC-C--------AAG-----GC----------AA--------CGAGGUGUUCAGUCC--G
CGUUUACUAACU--AUCCGUUCC-UUUCU-----
>Methanosarcina_mazei
------UAGGAA--UUAUGCUAUCA-GGUGGAUG-GCUCGGC-UCAA-G---AGCUGACG
AAGGACGUGC-CAAGCUGCGAUAAGCCCGGGGUAGGUGCAUGGAUCCAA-----UGAAC-
CCG-GGAUCUCCGAAUGGGACC-UCU---CC----------------------AUA----
--------------------------GU-G-AUCA-------------------------
------GUCA------------------------------------U-G-AU-CGGGAAC
GCUCCGAAUUGAAACAUCUCAGUAGGAG--CUGGAAAAGAAAUCAA-ACGAGAUGCCGUA
AGU-AA-CGGCGAGUGAAACCGGC-A-CA-GUUCAAACCGAAUCCCU-------------
--------UC-GGGGAAAUGUGGUG--UUG-------U-AG--GGCUGUU-----C----
---------------------AAAAGUCU-----------CG--CG-------GCAAA--
ACCA------AACUUG-CCUG---------------------------------------
----GAACG-GCAGA-------CCAUAGAGUGUGACAGUCACGUA---------GGU---
G--UAAG------CCAGAAGA-CG------------------GGAACAUGUCCCUGAGUA
CCGUGCGUCG---GAUAUCGUGCGGGAA-UCCGGGGGGCACC--AACCUCCAAAACUAAA
UA--CUC-C-UUGAGACCGAUAGC-GAAA-U-AGUAGGGUGACCGAACG-CUGAAA-AGU
AC-CCCGAGAAGGGA-G-GUG-CAAAGUGCCUGAAACCUGAUAGUGAUGG-AACGA-UAC
G---GCAUGAAA-GGAU-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-UUGAUAU--G-------------------AA------GG-AA---
---C------CA------------------CUC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-AG------UG
--------UUGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------A-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UAUCAC--U----
-------------GCCAG--UGUCGUAUCUUACGUUUUGAAGAACGGGCCAGGGAGUGUA
-U-CUUGAUGGCAAUGGCUAACCUU---------UUAA--------UUGGGCA--GCCGA
AGCGAAAG-CAACAU----------------------GUGCG-CAACCCUU---------
-------------------------------------------------ACGGG------
------------------------------UGA-GGCACG-ACGUAU-------------
----------------------ACAA--------------------------GU-G-CGU
----------------------GGAGUCAUCGGGGUAC-GACCCGAAGCC-GGGUGAUCU
AGGCGUGGGCAGGUUGAAGCGUGGCGAAAG-CUACGUGGAGGACCGC-AAGCGGUAUUGA
UCUGCAAAUCAUUCGUGUGACCUGCGUCUCGUAGUGAAAUGCUAAUCUAACCCGG-CAUC
CGCUGGUUCCUUCCGAAACAUGUCGCAGCAUGACCUGAC-UGGA----------------
------------------------------------------------------------
-GAUU-GUCGGUGGAGUAGAGC-ACUGAUUGGC-GGUU-CCGGGGG-G-GA-AA-CCCC-
U-CGCCCGCUUGUCAAACUCCAAACCCACUG-----------------------------
------------------------------------------------------------
----------------------U-CA-U--CA-AAGAUAGUCGG-AGUCCGG-A-CUGCU
G-GGG-UAAGCUUGUA-GUCCGUAAG-GGAGAC---AACCCAGCCCGU-GGUUAAGGUCC
CCAAGU--GU-CGA-CU-AA---GU-GUAAACA-CUAAAGGGCGUCCCAAGCCCAAGACA
GCUGGAAGGUUAGCUUAGAAGCAGCUA-CCCUUCAAAGAGUGCGUAACAGCUCACCAGUC
-----GAGGUUUGGGGCCCCGAAAAU-UGAC-GGGGCUCA-AGUCGAC----------CA
CCGAU-ACCACGGAGUACCGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGUAA
UC-UCGUAGGAAGGC-GUUGUGU-U-C-GGGCU-GAAGCAG--G-GCUGUGAAGU--C-C
UGUGGACCGU-UCA-CAAACGAAAAUCC-UGGUAA-UAGUA-GCAGCA-UAGCA-GGGUG
A--G---------------AAUCCC-UGC-CGCCGA-AGGGGC-CAGGUUUCC-UCGGCA
AUGUUCGUCAGCCGAGGGUUAGUCGG--UC-CUAAGACGUACCGU-AAU-UCGA---GUA
C-----------------------------------------------------------
-------------------------------------GCC-AA-A-AGGGA-AACAGGUU
-AAUA-UUCCUGUACCAUU----UAGC---------------------------------
------------------------------------------------------------
-----------------------------------ACUG-AGUCU-GACGUCUCAGGGCA
GG-CCGAGCGGC-GC-------CGUC-----G-CGCCGU-CUAA-G-CAGCG-----A-A
-----UC-----CC----------------GUGG-AGA-G-CC-----------------
---GUAAU-GGCGAGAAUC-----GGGCGA----AUCUG-UAA-UG---GC---------
------------------------------------------------------------
-----------U-UA-A-GU-CGGC-U-G-CACCCAGGGACCC-GUGAAA-A-GGCAGC-
------------------------------------------------------------
--UAAAUGUCCGUACCGAGAACUGACACAGGUGCCCCUAGCU-GAAAAGGCUAAGGC-GU
GUCGGA-GUACUUCAG-UUAAGGGAAUUCGGC-AAAUUAGCUCCGUAACUUCGG-GAUAA
GGAGUG-CCUG-C-UG--UGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------AGACAGCA--GGUCGC
AGUGACCAGGGGGCUCUAA-----CUGUCUAAUACCAACAUAGGAGAUUGCAAACCCG--
--UA-A-------------GGGCUAGU-ACAAUCUCUGA-AUCCUGCUCAGUGCAG-G-U
ACCUGAAACCCCGG-------------UUCA-------------ACGGGAAGAAGGGC--
CUGUAAAC-AGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCU-UA
AUUGGCGACUUGCAUGAAUGGAUCAAUGAGA--GCCCUACUGUCCCUAAC----UGG-AA
UCCGGUGAAGCUUACAUUCUAGUGCACAGUCUAGAGACCUCUAGGGGGAAGUGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGUCGCUGGGUUGUGGUUCUGGAUGUACAGAGU-AGGU
AGGAGGCGUCG---AAGCGUG-UGC----------------------------GCCA---
-----------------------------------GC-AUGCGUGGAGCC-AC-AAUUGG
GACA-CUACC-CUUCUGGGACUACGACCCUAACUC-U----------GCGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------AGAGGACC-CCGAUAGGUGGG
CAGUUUGCCUGGGGCGGGACGCCCUUGA-AAAGAUAUC-AAGGGCGCGCAAUGGUUGACU
CAAGUGGGUCGGAAACUCACUGAA-GAGUG-CAAGAGCAU-AAGUCAGCCUGACG-UUAU
----------------------------------UCAGCACAGCAGUGGAUGACGAGACG
AAA-GUCGGUUCUAGCGAACUUUU-----------GAG---CCUCC-UUG----------
----------GUGGGGGCCAAAAAUGACAG-AA--AAGUUACCCCGGGG-AUAAUUGAGU
CGUUGCCGGCAAGAGUACAUAUCGACCCGGCAGCUUGCUACCUCGAUGUCGGUUCUUUCC
AUCCUGGCCGUGCAGCAGCGGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUACU-----------------
---A-GAG--------------------------------------GUGC-ACAAGGUCU
GCGGGUAAGC-UGCUUUUAGUACGAGAGGAA-CCAAGCAGCGGCGCCAC-UGGUG-UACC
GGUUGUCU-GACA-AGGCAU-C-GCCGGGCAGCUACGCGCUA-AGGAAUAAGAGCUGAAU
GCA-UC--UAAGCUCGAAAUCUGACCUAA-A-A-AGAGACCUU-UU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------UA-AGG----AUUCCGGUAGAAGACCGGUU-UGAUAGAAA-CGGGAUGUAAG-C
AC-C--------AAG-----GC----------AA--------CGAGGUGUUCAGUCC--G
CGUUCACUAACU--AUCCGUUCC-----------
>Methanosphaera_stadtmanae
---------------UAUGCCAUCU-GGGGGAUG-GCUAGGC-UUGA-GAUUAACUUAUG
AAGGUCGUGG-CAAGCUGCGAUAAGCCUGGGCGAGAAGCAUGCAUUCAU-----UGAAC-
CUG-GGAUUGCCGAAUGAGAUU-CUU---AU----UACUC-U----------UUAC----
------C---G----A----G---UAAU-G-AUCC-AC----------------------
------ACUU----------------------------------GUG-G-AU-UGGGAAC
CCACUGAAUUGAAACAUCUUAGUAGGUG--GAGGAAGAGAAAACAA-UUGUGAUGCCGUU
AGU-AA-CGUCGAGCGAAAACGGU-A-UA-GGACAAACUGAAUCCCUACUAGA-------
AAUU---AAU-AGGGAGAUGUGGUG--UUG-------A-AG--AUUCAAAAUAUUU----
--AU-----------------GGUGGCCU-----------GU--UA-------UUAUC--
CUUG--UUUAAUUAUU-GUUG---------------------------------------
----GAAUACUUUAA-------CCGUAGAGGGUGAUAGUCCCGUA---------GAC---
UUUGGGG------UAAUUUGG-UCAUU---------------UUUUUUUGAAUUCGAGUA
GCGUUCAUUG---GAAAUUGGGCGUGAA---UGGGAGGCAUC--GACUUCCAAUUCUAAA
CA--UUA-C-UCAAGACCGAUAGU-GUAU-UUAGUACCGCGAGGGAAUG-CUGAAA-AGA
AC-CCUU--UUAGGG-G-GUG-AAAAGUACCUGAAACCAGAUGGUGACAG-CCUGG-CAU
G---GCAUGAAA-GGAAUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AU-AAUUCAU--G-------------------AA------U--UU---
---C------UU------------------CUG---------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------C-AC------UU
--------GAA-AUUC--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------U-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UUGUCUUUG----
-------------ACUAG--UGUUGUGUCAUUCGUCUUGAAACACGAGCCAGGGAGUUUG
-U-AGUUGUGGCGA-GGCUAAAAAGC--------UUAA-------GCUUUGUA--GUCGC
AGGGAAAC-CGAGUA----------------------AGACG-UAACUU-----------
----------------------------------------------------UU------
------------------------------UGU-GUGGUU-CUGAUU-------------
----------------------AUAA--------------------------AA-U-GUC
----------------------AUAGUCACAGCUUUAA-AACCCGAAGCC-GGUCGAUCU
AUCCGUGAGCAGGAUGAAAUCGCUCAUACG-AGUGAUGGAGGUUCGC--AGAGUUGUUGU
UCUGCAAAACACUCUUAUGACUUGCGGUUAGUGGUGAAAGGUCAAUCAAGAUCGG-UGAC
AGCUGGUUCCUAUCGAAAUAGCUCCAAGGCUAGACUGAU-UGGA----------------
------------------------------------------------------------
-GAUA-GCUGGCAAGGUAGAGC-ACUGAUUGAG-UGUU-UAGGGUG-G-GA-AA-CUAC-
U-CGGCAUUCUGUAAAACUCCAAACUUGCUA-----------------------------
------------------------------------------------------------
----------------------G-CA-U--CG-UAGAAGAUCGG-AUCGAGG-G-GCGU-
G-GGG-UAAGCCUGUG-UCCCGAAAG-AGAAAC---AACUCAGACUUU-GGUUAAGGUCC
CCAAGU--GC-CGG-AU-UA---GU-UU---------AAGGGAGUCAUUAGCCCUAGACA
GUGGGGAGGUGGGCUUAGAAGCAGCCA-CCCUUUAACGAGUUCGUAACAGAUCACCCAUC
-----GAGGUUAAUGGCAUCUAAAAU-GGAA-GGGG-UUA-AGUCGGC----------CA
CCGAU-ACCAAUGAACAUAUAC--------------------------------------
------------------------------------------------------------
--------------U--UUU----------------------------------------
----------------------------------------------------GUAUAUGA
UU-UCGUAGAUAGGC-GUCCUGU-U-G-GAUUU-GAAGCUG--G-GGUGUGAAUU--C-C
AGUGGAUCUU-GCA-GGAAUGUGGAUCC-UGGUAG-UAGUA-GCAGCA-AAGUA-AAGUG
U--G---------------AAUCUU-UAU-CGCCGA-AGGGGC-UAGGGUUCC-UUGGCA
AUGUUCGUCAGCCAAGGGUUAGGCGG--UC-CUAAGGGUAACGGU-AAU-UCCA---GUU
A-----------------------------------------------------------
-------------------------------------UUC-GA-A-AGGGA-AACAGGUU
-AAUA-UUCCUGUCCAACA----CAAUU-UA----C------------------------
-----------------------------------------------ACGG--CAAC---
-----GUUUA-------------------------UGUU-GGAUU-AACACUUCGUGAUA
UG-CCUUGUAAG-AU-------UGUC-----G-UCUUAU-UCAA-AUUUUAG-----A-A
-----GC-----UA----------------AGGG-AGA-A-CU-----------------
---GUAAU-AGUGAGAACU-----UGGUGU----AUUUA-UGA-UGA--GU---------
------------------------------------------------------------
-CUCUCGUUUUUUUGAGAUU-UGGU-U-G-AUUCAUGGAGUCC-UUGAAA-A-GAAAAUA
UCCAU-----------------------------------------------UUAUUUGA
U-UGUGUUUCCGUACCGAGAUCCGACACAGGUGCCCCUAGUU-UAGUAGACUUAGGC-GU
GUUAGG-GUAAACCAG-CUAAGGGAAUUCGGC-AAUUUAGCUCCGUAACUUUGG-GAUAA
GGAGUG-CCAG-C-UA--CGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GUAGUAGCU--GGUCGC
AGUGACUAGGGAGGUUCGA-----CUGUUUAAUAAAAACAUAGCUCCCAGCUAGCCCG--
--UA-A-------------GGGUGUGU-ACUGGGGGCGA-CACCUGCCCAGUGCUG-G-C
ACGUGAAGCUGGGG-------------UUCA-------------ACCUGGUGAAGCGC--
CAGUAAAC-GGCGGGGGUAACUAUAACCCUCUUAAGGUAGCGAAAUGCCUUGCCGGA-CA
AGUACCGGCCUGCAUGAAUGGUAGAACGAAA--UCUCCACUGUCCCUAGC----UGG-AA
CCUAGUGAACCUGCUAUUCUGGUGCACAAGCCAGAGACUUCUAUUGGGAAGCGAAGA-CC
CCGUAGAGU-UUUACUGCAGUCUGCUAUUGAGGCUUGGUUGCAAGUAUGCAGCGU-AAGU
AGGAGACUUCG---ACGGUAU-GUC----------------------------GUCA---
-----------------------------------GG-CAUAUCUGAGUC-AU-UCAUGA
GACA-CUACU-UUCUUGUGACUGUGUUUCUAAGCU-A--------U-UUUU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------UUAGGACA-UUGGUAGAUGGG
CAGUUCGGCUGGGGCGGUACGCGUUUGA-AAAGAUAUC-AAACGCGCCCAAAGGUUGGUU
CAAGUGGGACAGAGAUCCACUGUA-GAGUG-UAAGGGCAU-AAGCCAGCCUGACU-GUAU
----------------------------------UUCGAACAGUAAGAAAUUCAGAGGCG
AAA-GCCGGGCCUAACGAACCUCA-----------AUG---UCCUCGUCG----------
----------AUGGGGGCUUGAGAUGACAG-AA--AAACUACCUCGGGG-AUAACUGGGU
GGUCGCAGGCAAGAGCCCAUAUCGACCCUGCGGCUUGCUACUUCGAUGUCGGUUCUUUCC
AUCCUGGGUGUGCAGCAGCACCCAAGGGUGGGGCUGUUCGCCCAUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUGGUUGCUAUCUAAU-----------------
---A-GAA--------------------------------------GUGUUUUGUUGCUU
GAGCGGAAGG-UGGUUCCAGUACGAGAGGAA-CGAGCCGUCGGUGUCUC-UGGUC-UACC
AGUUGUCU-GAUA-AGGCAU-C-GCUGGGCAGCUACGCACUAUGAUAAUAAAGGCUGAAA
GCA-UC--UAAGCCUGAGGUAUUCCGUGA-A-AAUAAGCAGCU-UU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----UUU-AGG----GUAUGAGUAGAAGACUUGUU-UGAUGGGAU-UGGGAUGUAAG-C
UU-C--------GAG-----AUUCUUU--GUUUU--------CGAGUUGUUAAGUCC--G
CAAUUUCCAACA--CCCGAUUUU-AAUACAAU--
>Methanospirillum_hungatei
---------UUC--UUACGCCUGUC-AGUGGAUG-GCUCGGU-UCGG-G---UGCCGACG
AAGGGCGUGC-CAAGCUGCGAUAAGCUCCGGGUAGACGCAUGGAGUCAU-----UGAAC-
CGG-AGAUCCCCGAAUAGGACA-UCCA--GA----UGC------------A-UAAA----
--------------------G---CAUCAU-UCCG-------------------------
------CCAU------------------------------------C-G-GAAAGGGAAC
GCCCCGAAUUGAAACAUCUUAGUAGGGG--CAGGAGAAGAAACCAA-CCGGGAUGUCGUU
AGU-AG-AGGCGAUCGAACACGAC-A-GA-GUUCAAACCGAAUCCUU-------------
-----------CGGGAGAUGUGGUG--UAU-------G-GA--CCGCGGC-----A----
---------------------UAAGAUUU-----------GC--AU-------UCAGA--
ACUG------AAGUUA-CCUG---------------------------------------
----GAACG-GUAUA-------CCAGAGAGGGUGACAGUCCCGUA---------UGU---
G--UAUG------CAUGCAGA-CU------------------UUAGCGGUAUCCUGAGUA
GCGUGGGUCG---GAAUUCCCGCGUGAA-UGUGGGGGUCAUC--AACCUCCAAAACUAAA
UA--CUC-C-CCGAAACCGAUAGC-GUAG-U-AGUAGCGUGAGCGAAAG-CUGAAA-AGC
AA-CCCUGGAAAGGU-G-UUG-AAAAGUGCCUGAAACUGACAGGUUAUCG-CGUGA-UAC
G---GCACGAAA-GGAU-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CU-UCAAAGC--G-------------------AA------GG-AA---
---C------GA------------------GUU---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-AC------UC
--------AAGUACGG--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------UUUUGU--U----
-------------GCCGG--UGUCGUAUCGUACGUUUUGAAGAACGGGCCAGAGAGUUUA
-U-UCUGUUGGCGACGGUUAAUUU---------CUAUG---------AAAGAA--GCCAG
AGGGAAAC-CAACAA----------------------GUCCG-CAGCCGUA---------
---------------------------------------------------AGG------
------------------------------UCA-GGGACG-ACGUAC-------------
----------------------UACCA-------------------------GU-G-CGU
----------------------GGAGUCAGCAGGAUAA-GACCCGAAGCC-CGGCGAUCU
AUGCGUGGGCAGGUUGAAGCGUGCCGAAAG-GUGCGUGGAGGACCGC-AAGCGGUUUUGA
UAUGCAAAUCAUUCGCGUGACCUGCGUAUAGGAGUGAAAGAUUAAUCGAGCCGGG-CAUC
AGCUGGUUCCUCUCGAAACAUGCCGUAGCAUGACCUGAU-CUGA----------------
------------------------------------------------------------
-GAUC-GACAGUGAGGUAGAGC-ACUGAUUGGG-GAAG-CUGGGGA-A-GA-AA-UUCC-
U-CACUCUCCUGUCAAACUCCAAAUUCCCUG-----------------------------
------------------------------------------------------------
----------------------U-CA-U--CA-GCGACGAUCGGAAGUCCGC-A-UUAC-
G-GGG-UAAGCUUGUA-AUGCGUAAG-GGAGAC---AACCCAGACCGU-GGUUAAUGUCC
CUCAGU--GC-AGG-CU-CA---GU-GUAAACA-CUGAAAGUAGUCCUGGGUCAAAGACA
ACUGGGAGGUGAGCUUAGAAGCAGCUA-CCCUUUAAAAAGUGCGUAACAGCUUACCAGUC
-----AAGAUUCAGGGCGCUGAAAAU-GGAC-GGGGCUUA-AGCCUGC----------CA
CAGAU-ACCACGGACCAUACGA--------------------------------------
------------------------------------------------------------
--------------AU--------------------------------------------
-----------------------------------------------------UGUAUGA
UG-GCGUAGAGAGGC-GUCCUGC-A-U-GGGCG-GAAGCAG--G-GUUGCAAGAU--C-C
UGUGGACCGU-GCA-GGAAUGAAAAUUC-UGGCAG-UAGUA-GAAGCUUAAGAU-UGGUG
A--G---------------AAUCCA-AUC-CGCCGC-AGGGGC-UAGGUUUCC-UCGACA
AUGUUCGUCAGUCGAGGGUUAGUCGG--UC-CUAAGACGUACCGU-AAU-UCGA---GUA
C-----------------------------------------------------------
-------------------------------------GCC-GA-A-AGGGA-AACAGGUU
-AAUA-UUCCUGUACCUGU----AUCA---------------------------------
------------------------------------------------------------
-----------------------------------AACA-AUCCU-GACGCUUUCGGAUA
GG-CAUUGCGGA-GU-------CAUC-----G-CUCCGU-CUAA-GCCGGAU-----A-U
-----GA-----AA----------------UUGG-AGU-A-CC-----------------
---GUAAU-GGUGAGAAUU-----UUUCAA----AACGG-UGA-UG---GG---------
------------------------------------------------------------
-----------G-UA-A-CA-AUGC-U-G-AUUCCAGGAGCCC-GUGAAA-A-GGGUG--
------------------------------------------------------------
--AUACGGUCCGUACCGAGAACUGACACAGGUGCCCCUCGCU-GAGAAGGCGAAGGC-GU
GUCGGGAGUAAAUGUG-UUAAGGGAACUCGGC-AAAUUAGCCCUGUAACUUUGG-GAUAA
GGGGUG-CCUG-C-CC--AGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GAUUGGGCA--GGUCGC
AGUGACAAGAUCGCUCCGA-----CUGUCUAAUAACAACAUAGCAGACUGCAACUCCG--
--AA-A-------------GGACUCGU-AUAGUCUGUGA-UUCCUGCCCAGUGCGA-G-U
AUCUGAACACCGGG-------------UUCA-------------ACCGGACGAAGGAC--
UCGUAAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGUCGCU-UA
AUUGGCGACUUGCAUGAAUGGAAUAACGAGA--GCGAUACUGUCCCUAAC----ACA-UA
CCCGUUGAACCUUUUGUACUAGUGCAGAGACUAGUGACUCCUUAUGGGAAGUGAAGA-CC
CCGUGGAGC-UUUACUGCAGCCUGUCGUUGGGUUACGGUAUUACCUGCGCAGGGU-AGAU
GGGAGACGUCG---AUCCAAC-CCU----------------------------UGUG---
-----------------------------------GG-GGUUGGUUAGUC-AC-CGAUGA
GACA-CCAUC-CUGGUUUUAUUGUAAUUCUAACUG-A----------UUUA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------UCAGGACA-UCGAUAGGUAGG
CAGUUUGGGUGGGGCGCCACACCCUCGA-AAAAAUAUC-AAGGGUGCCCUAAGGUCAACU
CAAGCGGGUCAGAAACCCGCUGAA-GAGUGUCAAGAGCAA-AAGUUGGCCUGACG-CGAU
----------------------------------UUCGCAUAGCAAGAAAUCGCGAGAGG
AAA-CUCGGGUCUAACGAACCAAU-----------ACG---CCCUG-UUG----------
----------AUGAGGGCUAUUGACUACAG-AA--AAGCUACCCCGGGG-AUAACAGAGU
CGUCGCCGGCAAGAGCACAUAUCGACCCGGCGGCUUGCUACCUCGAUGUCGGUUCUUUCC
AUCCUGGCUGUGCAGCAGCAGCCAAGGGUGAGGUUGUUCGCCUAUUAAAGGGGAUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGUUACUAUCUAUA-----------------
---A-GGA--------------------------------------GUGU-UGGAAGUCU
GAAGGCAAGA-AUGAAAUAGUACGAGAGGAA-CUUUCAUUCGGCGCCAC-UGGUC-UACC
GGUUGUCU-GACA-AGGCAA-C-GCCGGGCAGCUACGCGCCA-AGAGAUAAAAGCUGAAA
GCA-UC--UAAGCUUGAAACUCAGCCUGA-ACA-AGAGACUUC-AU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------GA-AAG----ACACGGGUAAAAGACCCGGU-UGAUAGGUU-CGGGAUGUACG-C
AC-G--------AAG-----GC----------AA--------CGACGUGUUCAGUCC--G
CGAAUACUAAUC--GUCUUAAUA-ACGUC-----
>Methanothermobacter_thermautotrophicus
-CU------UAU--UUAUGCCGUCU-GGGGGAUG-GCUUGGC-UUGAGU---CGCUGAUG
AAGGCCGUGG-CAAGCUGCGAUAAGCCCAGGGGAGGAGCAUGCAUCCUU-----GGAUC-
CUG-GGAUUGCCGAAUGGGACU-UCCU--GG----CCGUC-CCUGCAC-----UCU----
GUGCGGG---G----G----C--UGGUC-A-CUCC-CCU---U-----------------
------UUCU-------------------------------UG-GGG-G-AG-GGGGAAC
CCGCUGAACUGAAACAUCUUAGUAGGCG--GAGGAAGAGAAAGCAAUAUGCGAUGCCGUG
AGU-AA-UGGCGAAUGAAAGCGGU-G-GA-GGACAAACUGAAUCCAUCAUGGU-------
-GAC---GUG-GUGGAGAUGUGGUG--UUG-------C-GG--ACCCCCU-----G----
--CU-----------------UAGGGGUU-----------CC--AG-------GUGUG--
GUUGGGUUGAACUUGG-GCUG---------------------------------------
----GAAUGCCCGGG-------CCGUAGAGGGUUAAAGCCCCGUA---------GAC---
U--UGCU------GUGCCUGG-CCCUG---------------CGGGGGUGUUCCUGAGUA
GCGUCCAUUG---GAUAUUGGGCGUGAA-GCUGGGAGGCAUC--GACUCCUAAUCCUAAA
CA--CGU-C-UCAAGUCCGAUAGC-GAAC-U-AGUACCGUGAGGGAAAG-CUGAAA-AGU
AC-CCCUGAUAGGGG-U-GUG-AAAAGUGCCUGAAACCAGGCGGUGACAG-CCCGG-CAC
G---GCAUGGAA-GGAAUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AG-GCUUGCCCUG-------------------UA------AG-AA---
---A------CC------------------AUG---------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------C-AU------GG
--------GAGUAUGU--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGCUGGCUG----
-------------AUCAG--UGUCGUGUCAUCCGUCUUGAAACACGGGCCAGGGAGUUUA
-GUGGUUGUGGCGA-GACUAAGAAGU-------GUGUC-------GCUUUGAA--GUCGU
AGGGAAAC-CGACAG----------------------GUCCG-CAGCAGCA---------
-----------------------------------------UC----UGUGCUG------
------------------------------UGA-GGGACG-GGGUCU-------------
----------------------UAAUA-------------------------GG-G-CCU
----------------------GGAGUCACAGCCCUAA-AACCCGAAGCC-GGUCGAUCU
AGCCCUGGGUAGGAUGAAGUCGCUCUUACG-AGUGAUGGAGGUCCGC--AGGGGUGUUGU
CGUGCGAAACAUUCCUCUAACCUGGGGUUAGUGGUGAAAGGCCAAUCAAGGCCGG-UGAC
AGCUGGUUCCACCCGAAAUGGCUCGUAGGCCAGCCUGAC-UGGA----------------
------------------------------------------------------------
-GGUU-GGUGGCGGGGUAGAGC-ACUUAUUGGG-UGUU-UAGGGGG-A-GA-AA-UCCC-
U-CGGCAUCCUGUAAAACUCCGAACUCGUCA-----------------------------
------------------------------------------------------------
----------------------C-CG-C--UG-UUGAAGGUUGG-AGUCAGG-G-GCGC-
G-GGG-UAAGCCUGUG-UCCCGAGAG-AGGAAC---AACUCAGACUGG-GGUUAAGGUCC
CUAAAU--GC-CGG-CU-AA---GU-CU---------AAGGGGGUCUUUGGCCCUAGACA
AUGGGAAGGUGGGCUUAGAAGCAGCCA-UCCUUUAAAGAGUUCGUAACAGAUCACCCAUC
-----GAGGUCAAAGGCACCGAAAAU-GGAG-GGGAAUUA-AGCCGGC----------UA
CCGAU-ACCUCAGAGCACCACU--------------------------------------
------------------------------------------------------------
--------------U--UUG----------------------------------------
----------------------------------------------------UGUGGUGG
UC-UUGUAGGGUGGC-GUCCCGU-U-G-GGGUU-GAAGUGG--G-GGCGUGAGCU--C-C
UGUGGACCCU-GCG-GGAAUGAGGAUCC-UGGUAG-UAGUA-GCAGCA-AAGUG-AGGUG
A--G---------------AAUCCU-UAC-CGCCGG-AGGGGC-UAGGGUUCC-UUGGCA
AUGUUCGUCAGCCAAGGGUUAAUCGG--UC-CUAAGGCCAUGGGU-AAUGUCCA---UGU
G-----------------------------------------------------------
-------------------------------------GUC-GA-A-AGGGU-AACAGGUU
-AAUA-UUCCUGUACGGUC----CAGGUACU----U------------------------
-----------------------------------------------GCGG--UGAC---
-----GCUGG---GU--------------------UGGG-CUUCU-GACGCUUCGGGGUA
GG-CUGAGCGGG-AU-------UUUC-----G-UCCUGU-UUAA-G-GGUUG-----A-A
-----GC-----CU----------------GGGG-AGA-G-CC-----------------
---GUAAU-GGCGAGAACU---AUUGGUGA----AGGCC-UGA-AUA--GC---------
------------------------------------------------------------
-CACUCCUUGUUGGGUGGUU-CGGC-U-G-UGCCCUGGAGUCC-UUGAAA-A-GGGAGUC
CUUCUU------------------------------------------------GGGAUC
C-UGGAUCGCCGUACCGAGAUCCGACACUGGUGCCCCUAGCU-GAGUAGGCUAAGGC-GU
GUUGGG-GUAACCUGG-CUAAGGGAAAUCGGC-AAAUUAGCCCCGUAACUUUGG-GAGAA
GGGGUG-CCAG-C-CA--UGU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------AGAUGGCU--GGUCGC
AGUGACAGGGGGGGCCCGA-----CUGUUUAAUAAAAACAUAGCUCCUAGCUAGCCCG--
--UG-A-------------GGGUGUGU-ACUGGGGGCGA-CACCUGCCCAGUGCCG-G-C
ACGUGAAGCCCUGG-------------UUCA-------------ACGGGGUGAAGCGC--
CGGUAAAC-GGCGGGGGUAACUAUAACCCUCUUAAGGUAGCGAAAUGCCUUGCCGGA-UA
AGUACCGGCCUGCAUGAAUGGUUGAACGAGG--UCCCUACUGUCCCUAGC----CAG-GA
CCUGGUGAAGCUGCUGUUCUGGUGCACAAGCCAGAGACUCCCAGUGGGAAGCGAAGA-CC
CCGUAGAGC-UUUACUGCAGUCUGCUGUUGGGGCUUGGUCAUGGGUAUGCAGUGU-AGGU
GGGAGGUGUCG---AUGCCAUGGUC----------------------------GCCA---
-----------------------------------GGCCGUGGUGGAGCC-GG-UCAUGA
GACA-CCACC-UUCCUGUGACUGUGUCUCUAACCC-CU--CG-----UUUU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------UG--------------------
--------------------------------------GGGGGGACA-UCGGUAGAUGGG
CAGUUUGGCUGGGGCGGCACGCGCUUGA-AAUGGUAUC-AAGCGCGCCCUAAGGUCGGCU
CAGGCGGGACAGAGAUCCGCUGUA-GAGUG-UAAGGGCAU-AAGCCGGCUUGACU-GUGC
----------------------------------UCCUACUAGUAGGGGGUGCAGGUGCG
AGA-GCAGGGCCUAGCGAACCCCA-----------GAG---UCCUCGUCG----------
----------GUGGGGGCCUGGGAUGACAG-AA--AAGCUACCUCGGGG-AUAACUGGGU
GGUCGCAGGCAAGAGCCCAUAUCGACCCUGCGGCUUGCUACUUCGAUGUCGGUUCUUUCC
AUCCUGGGUGUGCAGCAGCACCAAAGGGUGGGGUUGUUCGCCCAUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUGGUUGCUAUCUACU-----------------
---G-GGA--------------------------------------GUGUGUGGUUGCCU
GAGGGGAAGG-UGGUUCCAGUACGAGAGGAA-CGGACCGUCGGCGCCUC-UGGUU-UACC
GGUUAUCC-GAGU-GGGUAU-U-GCCGGGCGGCUACGCGCUAUGAUUAUAAAGGCUGAAG
GCA-UC--UAAGCCUGAGGUUUUCCCUGA-A-AAUAGGCGGCU-UG--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------U--GGA----CCGCGGGUAGAAGACCUGUU-UGUUGGGGC-GGGGGUGUGAG-C
UU-C--------GAG-----GCCUGUUUUUGGGU--------CGAGUUGUUUAGCCU--G
CCGUUUCCAAGG--UUUUUUGUC-CCU-------
>Nanoarchaeum_equitans
-----------C--UGACCCCGCCC-GGUGGAUG-CCUGGGC-UCGG-G---AGCCGAAG
AAGGGCGUGG-CAAGCUGCGAUAAGCCAGGGGGAGGCGCACGCAGCCGU-----UGAUC-
CCU-GGAUCCCCGAAUGGGACC-UCCU--GC----CCGGG-GG----------UUA----
-----AC---C----C----C---GGGC-G-CCCC-------------------------
------GAUAA-----------------------------------G-G-GG-CGGGAAC
GCGGGGAAGUGAAACAUCUCAGUACCCG--CAGGAAAAGAAAGAGAAAUUCGAUGGCGGG
AGU-AG-GGGCGACCGAAACCGCC-G-UA-GCCCAAACUGAAUCCCGUAGGGA-------
-AAC---CUA-CGGGAGAUGUGGGG--UUGUU-----G-GG--GGUGGCG-----G----
--C------------------UUUCCCUC-----------CC--GC-------GGGAA--
CCCG------AACUCC-GGUG---------------------------------------
----GAAC--CGGGG-------CCGUAGAGGGUGACAGCCCCGUA---------GGG---
G--UAAC------CGCGGAGG-GAGU----------------GCCGCCACUUCCAGAGUA
CCGCGCCUCG---GAUAUGGCGCGGGAA-GCUGGGGGACACA--CGCCCCCAAGGCUAAA
UA--CUC-C-CCGAGUCCGAUAGC-GGAC-U-AGUAGGGUGACCGAAAG-GUGAAA-AGA
AC-CCGUG-GAAGGG-A-GUG--AAAGAGCCUGAAACCGGGCGGGGAUAG-UCAGG-UGG
G---GCCGGUUA-AGCCCC-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CG-AAG-----------------------------------G-AA---
---C------CC------------------CCG---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------C-GG------GG
--------UAGUA-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------CUU-GC----
-------------UAGCC--GGUUCCACCGUACGUUCGGGAGCACGUGCGGGGGAGUGUG
-C-CCGAGUGGCGA-GGUUAAGGGG--------AUAAA--------CCCCGAA--GCCGU
AGGGAAAC-CGAAG-----------------------GCCCG-CAGCCC-----------
-----------------------------------------------UUAUGGG------
------------------------------CGA-GGGGCC-GCGUCC-------------
----------------------UAUA--------------------------CG-G-GCG
----------------------UAAGUCACUCGGGCAC-GACCAGAAGCC-CGGCGAUCU
ACCCCGGGGCAGGGUGAAGCGGGGU-UUUU-CCCCGUGGAGGCCCGA--AGGGGUGGUGG
C---CUAUCCCCUCCUCUGACCCCGGGGUAGGGGCGAUAUACCAAUCGAGCCGGG-UGAU
AGCUGGUUCCCGCCGAAAUGGGCUGCAGUCCAGCCUCGG-CGGA----------------
------------------------------------------------------------
--GGC-ACCCUCGGGGUAGAGCGACGGAUUCCC-GUG--GCAAGGG-G-GU-UA-ACCC-
C-ACCACGGGAGUCCAACUCCGAACCCG-AG-----------------------------
------------------------------------------------------------
----------------------G-GG-C--CG-UAGAUGCCGGG-AGACGGG-G-GCGG-
C-GGA-UAAGCCGCCG-UUCCGAGAC-GGGAAC---AACCGAGACCGG-GGUUAAGGCCC
CUAAGU--GC-CGG-CU-AA---GU-GGC-----UGGAAGGGUGUCCGCUCCCUAAGACA
CCGGGGAUGUGGGACUAGUAGUGUCCA-UCAUCUAAGGAGUGUGCAACAACUCACCCGGC
-----GAGGGAGCGGGCCCCGCAGAU-GGAC--GGGCCUA-AGCCGGC----------CG
CCGAG-ACCCCGGGCCGGGGAU--------------------------------------
------------------------------------------------------------
--------------CCGAUG----------------------------------------
----------------------------------------------------GAUCCCCG
UG-CGGUAGGCGGGC-GUCCCGG-U-G-GCCUA-GAAGGCG--G-GCCGUGAGGU--C-C
GCUGGAGCCG-CCG-GGAAUGAGAAUCC-CCGCGU-GAGUA-GGAGCA-AAGAG-GGGUG
A--G---------------AAGCCC-CUC-CGCCGAAAGGGAA-AAGGGUUCC-CUGGCA
AUGACCAUCAGCCAGGGGUGAGUCGG--UC-CUAAGGCCGGCGGU-AAC-UCCG---CUC
G-----------------------------------------------------------
-------------------------------------GCC-GA-A-AGGGA-AAGGGGUU
-AAUA-UUCCCCUACCGCC----CGGGUAGG----C------------------------
-----------------------------------------------GCGG--CAAC---
-----GCCAA---GC--------------------CCUA-CUCCC-GACGCCUGGGGCUA
GG-CCGACCGCG-GA-------UUUC-----C-CGCGGC-CAAC-C-GGGAU-----A-G
-----GG-----CC----------------GGGG-AGU-G-CC-----------------
---AUUAU-GGCGAGAACC-----GGCCAA----ACCCG-GGA-CGG--GG---------
------------------------------------------------------------
-CCCCC---GUAUGGGGGCU-UCGG-C-C-GAGCCCUGGGCCC-AUGAAA-A-GGGAGUA
GGGAA--------------------------------------------------CGAUC
C-CGGGCGACCGUACCGAGAACCGUGACAGGU-UCCCUGGGU-GAGCAGCCUAAGGC-GG
UGGGGU-AUAACCUGG-CCGAGGGAAAUCGGC-AAAUUGGCCCCGUAUCUUCGG-UAGAA
GGGGUG-CCUG-C-GG--UCGU---GGGGU------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------AAUCCU--GCGACCGCA--GGUCGC
AGUGACAAGGGCGGGCCGA-----CUGUUUACUAAAAACAUAGCCUCCGGCAAGCCCG--
--AA-A-------------GGGUGUGU-ACCGGAGGUGA-CGCCUGCCCAGUGCCG-G-U
ACCUGAACCCCCCG-------------UCCA-------------AGGGGGCUAAGGGC--
CGGUAAAC-GGCGGGAGUAACUGUAACUCUCUUAAGGUAGCGUAGUCCCUUGCCGGU-UA
AAUGCCGGCUUGC--GAACGGCGUAACGAGC--UCGCCACUGUCCUCGGC----CAG-GG
CCCCCUGAAAACGCCGUUCCCGUGGAUAGGCGGGAGAGGCCCGGUGGGAAGAGAAGA-CC
CCGUGAAGC-UUAACCGCAGCCUGUCGUUGCCCCGUUGUCCCCCACGCUCAGCGU-AGCG
GGGAGCGAU-G---AACCGGC-CCC----------------------------UCCG---
-----------------------------------GG-GGUCGGGGAUGC-GC-CCAUGA
GACA-CCCGC-CGUGGGGGACAACGGGGCUAACCC-C----------GAAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGGGGACA-GCGGCAGGUGGG
CGGUUUGGCUGGGGCGGCACACCGCCGA-AAAGAUAUC-GGCGGUGCCCAAAGGUCGGCU
CAGGCGGGUCAGAAAUCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACA-CGGC
----------------------------------CCUUUA---CAAGGGGCCGUGGCGGG
AAA-CCGCGGCCUAGCGAACCCCG-----------GUA---GCCCC-CGU----------
----------GUGGGGCUUCGGGACGACGG-AA--AAGCUACUCCGGGG-GUAACAGCUU
GGUCGCGGGCGAAAGUUCCCAUCGACCCCGCGGUUUGAGACCUCGAUGUCGGCUCUUCUC
ACCCUGGCCGUGCAGCAGCGGCCAAGGGUGGGGGUGUUCACCCAUUAAAGAGGAACGUGA
GCUGGGUUUAGUACGCCGCGAGGCAGUGUGGAUUCUAUCUACC-----------------
---G-GGC--------------------------------------CUGU-UCGGCGGCU
GAGGGGAAGG-ACGGCCUAGUACGAAAGGAA-CGGCCGUCCGGCGCCUC-UAGUC-GACG
GGGUGUCC-GUAU-GGGCAG---CCCCGGCAGCCACGCGCUA-GGGGGUAAGGGCUGAAU
GCA-UC--UAAGCCCGAACCCCUCCCCGA-A-AAGAGCCGCCG-AU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------C---CC----CCUCGGGUAGAAGACCCGGU-UGAUGGGGG-GGCGGUGGAAG-C
CC-C--------GAG-----GG--------UUUC--------CGAGGGGCG-AGCCG--G
CCCCUCCCAAUC--GGGGGGUGG-UCCUGCG---
>Natronomonas_pharaonis
-G----UGGCUA--CUGUGCCAUCU-GGUGAAUA-GCUCGGC-UCAG-G---CGCCGACG
AAGGACGUGU-CAAGCUGCGAUAAGCCUCAGGGAGCCGCACGAAGGCAA-----AGAAC-
UGA-GGAUCUCCUAAUGGGAAU-CCCC--AC------------------------C----
--------------------------GCAA-UUGC-------------------------
------UUCGC-----------------------------------G-C-AAUGGGGAAC
GCCCCGGAUUGAAACAUCUUAGUAGGGG--CAGGAAGAGAAAGCGA-AUGCGAUGUCGUU
AGU-AA-CCGCGAGUGAACGCGAC-A-CA-GUCCAAACCGAAGCCUU-------------
-----------CGGGCAAUGUGGUG--UU--------C-GG--ACUGACU-----C----
--C------------------CAUCAGCA-----------GA--AC-------GUUUC--
CGAG------AAGUCU-CCUG---------------------------------------
----GAACG-GAGCG-------CGAUACAGGGUGACAGCCCCGUA---------UCG---
G--AAGC------AAGUAUGC-UG------------------UGCGUCAGCUCCAGAGUA
GCGGGGAUUG---GAAAUUCCUCGUGAA-UUCGGCAGACAUC--GUCUGCCAAGACUAAA
UA--CGU-C-CUGAGACCGAUAGC-GAAC-A-AGUAGCGUGAGCGAACG-CUGAAA-AGC
AC-CCCGAGAAGGGA-G-GUGCAAUAGGGCUUGAAAUCAGAUGGCGAUCG-AGCGA-CGG
G---GCACAAAA-GG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------UC-ACUUGGA--A-------------------AA------CG-AC---
---C------GA------------------GGC---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------G-CC------UC
--------CAGUAGGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------C-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------CCAAGUGAA----
-------------GCCGG--UGUUCCGUCGUACGUUUUGAAAAACGAACCAGGGAGUGUA
-U-UUGUUUGGCGA-GUCUAACCCG--------UUCAU--------CGGGGAA--GGCGU
AGGGAAAC-CGACAU----------------------GGCCG-CAGCAU-----------
----------------------------------------------------UG------
------------------------------CCA-GGGCCG-CCGUGU-------------
----------------------UCAA--------------------------GC-G-CGG
----------------------GGAGUCAAACGGAUAC-GACCCGAAACC-GGGUGAUCU
AUGCGUGGACAGGACGAAGCGUGGCGAAAG-CUACGUGGAGGUCCGU-UAGAGUUGGUGU
CCUACAAUACCCUCUCGUGAUCUACGUAUAGGGGUGAAAGGCCCAUCGAACCCGG-AAAC
AGCUGGUUCCGACCGAAACAUGUCGAAGCAUGACCUCUG-CCGA----------------
------------------------------------------------------------
-GGUA-GUCCGUGGGGUAGAGAGACUGAUUGGA-GGCC-CCGCCCC-C-GA-GA-GGGGU
C-GGACCUCCUGUCAAACUCCGAACUCACGG-----------------------------
------------------------------------------------------------
----------------------A-CG-C--CG-UGGACGCAGGG-AGUCCGC-U-GUGC-
G-GGG-UAAGCCUGUG-CAGCAUGAG-GGAGAC---AACCCAGAGCUG-GGUUAAGGUCC
CCAAGU--GU-GGA-CU-AA---GU-GCGA----UUGAAGGUAGUCCCGAGCCCUAGACA
GCCGGGAGGUGAGCUUAGAAGCAGCUA-CCCUCUAAGAAAAGCGUAACAGCUUACCGGCC
-----GAGGUUCGGGGCGCCCAAAAU-GAUC-GGGGCUCA-AGUCCAC----------CA
CCGAG-ACCUAGCGGCACGCCU--------------------------------------
------------------------------------------------------------
--------------U--AC-----------------------------------------
-----------------------------------------------------AGCGUGG
UU-CCGUAGGUCGGC-ACUCCGG-U-U-GGGUG-GAAGCAC--G-GACGAGAGUU--C-G
UGUGGACCGA-CUG-GUGAAGAUAAUCC-UGGUUG-CAGUA-GCAGCGAUAGUC-GGGUG
U--G---------------AAUCCU-GAC-GGCCUA-AUGAGC-AAGGGUUCC-UCGGCA
AUGUUUGUCAGCCGAGGGUUAGCCGG--UC-CUAAGACUCGUCGU-AAU-UCGA---GCG
A-----------------------------------------------------------
-------------------------------------GUC-GA-AGUGGGA-AACUGGUU
-AAUA-UUCCAGUGCCACU----AUGC---------------------------------
-------------------------------------------------A----------
-----------------------------------UUGA-ACGCC-GACGCCUUGGGGUC
GA-CCGAACCGG-GC-------CUUC-----G-CCCGGU-CGAA-C-UGUCC-----A-A
-----AU-----CC----------------GUGG-A-A-G-CC-----------------
---GUAAU-GGCACGAAGC-----GGACGA----ACGGC-AGG-AUA--GC---------
------------------------------------------------------------
-----------G-CA-A--G-UCGG-U-U-CAACCUGGGGCCC-GUGAAA-A-GGCAAGC
------------------------------------------------------------
--AUAGUGUCCGUACCGAGAUCCGACACAGGUGCUCAUGCCG-GCGAAAGGCAAGGC-CU
GUCGGGAUCAACCGAC-GUUAGGGAAUUCGGC-AAUCUGGCCCCGUAAGUUCGC-GAUAA
GGGGUG-CCUG-C-CU--CGG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------AAAGAGGCA--GGUCGC
AGUGACUCGGACGCUCCGA-----CUGUCUAGUAACAACAUAGGUGACCGCAAAUCCG--
--CA-A-------------GGACUCGU-ACGGUCACUGA-AUCCUGCCCAGUGCGG-G-U
AUCUGAACACCUCG-------------UACA-------------AGAGGACGAAGGAC--
CCGUCAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAGUACCUUGCCGCU-UC
AGUAGCGGCUUGCAUGAAUGGAUUAACGAGA--GCGUCGCUGUCCCAACG----UUG-GG
CCCGGUGAACCAUACGUUCCAGUGCGGAGUCUGGAGACACCCAGGGGGAAGCGAAGA-CC
CUAUGGAGC-UUUACUGCAGGCUGUCGCUGGGACAUGGUCGCUGAUGUGCAGGAU-AGGU
AGGAGACGUUACACAGGUGCG-UGC----------------------------GCCA---
-----------------------------------GCACGUCGCCGAGUC-AA-CACUGA
AAUA-CUACC-CGUCAGUGACUGUGACCCUCACUC-C----------GGGA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGAGGACA-CCGAUAGCCGGG
CAGUUUGACUGGGGCGGUACGCGCUCGA-AACAAUAUC-GAGCGCGCCCUAAGUCCAUCU
CAGUCGGGUCGGAGACCCGACGAA-GAGUG-CAAGAGCAA-AAGAUGGAUUGACA-GUGU
----------------------------------UCUUCCCAACGAGGAACGCUGACGCG
AAA-GCGUGGUCUAGCGAACCGAU-----------GAG---CCUGC-CCG----------
----------AUGCGGGCCAUUGAUGACAG-AA--AAGCUACCCUAGGG-AUAACAGAGU
CGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCC
AUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUACU-----------------
---G-GGU--------------------------------------GUGU-CUGACGCUU
GACAGGAACA-ACCGUAUAGUACGAGAGGAA-CUACGGUUGGGUGCCAC-UGGUU-UACC
GGUUGUCC-GAGA-GGGCAC-U-GCCGGGCAGCUACGCACCA-CAGGGUAACGGCUGAAU
GCA-UC--UAAGCCGGAAACCUACCUGGA-A-A-AGAAGCGUC-GC--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------CG-AGG----UCUCUCGUAGAAGACGAGUU-CGAUAGACU-UGGGGUGUACG-C
GU-C--------GAG-----GC----------AA--------CGAGACGUUCAGCCC--G
CGAGUACUAACA--GACCGAAGC-CACCA-----
>Picrophilus_torridus
-AUUGUGUACUG--CUAAACUGUCU-GGGGGAUG-GUUUGGC-UUGA-G---AGCCGAAG
AAGGACGUGC-CAAGCUGCGAAAUGCUCUGGGGAGGCGCAUGGAGCCUU-----AGAUC-
CAG-AGAUCUCCGAAUGGGACU-UCCU--GA------------------------U----
--------------------------UC-A-CUCC-------------------------
------GUAA------------------------------------G-G-AG-AGGGCAC
CCCGGGAAUCGAAACAUCCUAGUACCGG--GAGGAAAAGAAAUCAA-UCGAGAUACCGUG
AGU-AA-AGGCGAUCGAAAGCGGU-A-GA-GGGCAAACCGAAUCCUA-CCCGA-------
-AAG---GGC-AAGGAGAUGUGGAG--UA--------U-GG--ACUUUCC-----C----
--C------------------AACGCCUC-----------UU--UU-------AUCGA--
UUCG------AAU-AA-GCUG---------------------------------------
----GGAAG-CUUAG-------CCAUAGAGGGUGAUAGCCCCGUA---------GAA---
G--AAGA------UAAAAAGG-CCAUGA--------------GGGGAAGUAUCCUGAGUA
CCAUGCGUCG---UUAUUCGCGUGGGAA-UACGGGUGGCAUG--AACAUCCAACCCUAAA
UA--CAU-C-UCAAGUCCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAA-CUGAAA-AGC
AA-CCCGG-AAGGGC-U-GUG-AAAAGAGCCUGAAACCAGACAGUGAAAA-CUUUA-UAG
G---GCACUAAA-GGGGU------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------GA-AC-------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CGAA------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------AGG-UG----
-------------ACCGG--UGUCCUAUAGUCCGUGUUGAAGAACGGGCCAGGGAGUUGC
-G-ACGGUUGGCAA-GGCUAAUUC---------UUAAA---------GAAGGA--GCCGU
AGCGAAAG-CGAUU-----------------------ACCCG-CACAGC-----------
---------------------------------------------------AAU------
------------------------------GGA-GGGGUA-GCGUAC-------------
----------------------CCAA--------------------------GU-G-CGU
----------------------UUAGUCAGCCGUGGCA-GACCCGAAGCC-GCUCGAUCU
ACGCCUGAGUAGGUUGAAGCUUAGCGAAAG-CUAGGUGGAGGACCGA--ACCGGUUCUGA
UGUGCAAAUCGUUCGGAUGACUUGGGUGUAGGGGUUAAAGGCUAAUCUAGAGCGG-CAAU
AGCGGGUUCCCCCCGAAACUACCCGCAGGUAGACCUCCA-UGGA----------------
------------------------------------------------------------
-GAUU-UCGGAUGAGGUAGAGCGACCGAUUGGC-CGGU-UAGUAGU-C-GA-AA-GACU-
G-CGCCGGCCUAUCAAACUCCGAACUUGUCC-----------------------------
------------------------------------------------------------
----------------------G-AA-U--CG-UAGAUAUGGGG-UGCUAGG-G-CAUA-
G-GGA-UAAGCUUUAU-GCCCGUGAA-GGGAAC---AACCUAGACCUG-GAUUAAGGCCU
CUAAAU--AC-UGG-CU-AA---GU-GCGA----UCUAAAAAGGUUUGCGGCCGAAGACA
GUGGGGAGGUUGGCUUAGAAGCAGCCA-UCCUUUAAAGAGUGCGUAACAGCUCACUCACC
-----GAGGCUACAUGCCUUGAAGAU-GGAA-GAGGCUAA-AGCCAGU----------UG
CCGAG-AUCCAGGACCACCGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGUGA
UG-UGGUAGGGGGGC-GUGCUGU-A-U-GGGAC-GAAGCUU--C-UUCGAGAGGA--G-G
AGUGGACCGU-ACA-GUAUCGCGGAUCC-UGGUAA-AAGUA-GCAGUC-AAGAG-UGGUG
A--G---------------AAUCCA-CUC-CGCCGA-AAGGGC-AAAGGUUCC-UUGGCA
AUGUUCGUCAGCCGAGGGUUAGCCGA--UC-CUAAGGCCAUUCCU-AAC-AGGA---AAU
G-----------------------------------------------------------
-------------------------------------GUC-GA-A-AGGGA-AGCUGGUU
-AAUA-UUCCAGCGCCUGA----GGUGUUC-----U------------------------
-----------------------------------------------GC-----------
-----------------------------------CAUG-CAUGU-GA-GCUUCGGGAUA
GG-AGGAGCACA-CC-------CGUC-----A-GUGUGU-UGGU-G-CAUAU-----A-A
-----GC-----AG----------------AUGG-AGA-G-UU-----------------
---GUAAU-GACGUAAAGU-----CUGCGA----AGAUG-UAU-CU----G---------
------------------------------------------------------------
-UCCCC---UUAUGGGGAUU-UCUC-U-A-AUUCCUGGAGCCC-AUGAAA-A-GCAUGCA
UGG----------------------------------------------------GUCAA
G-CCCCAGAUCGUACCAAGAACCGACACAGGUGCCCCUGGAU-GAGAAGUCCAAGGC-GU
UUGGGA-AUAAUGGAC-GCGAGGGAACUCGGC-CAAAUAGCUCCGUAUCUUAGG-UAGAA
GGAGUG-CCUA-U-CC--AGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GAGAGGAUA--GGUCGC
AGUGGCAAGGGGACCCCGA-----CUGUUUACCAAAAACACAGAUCACUGCUAGUCCG--
--UA-A-------------GGAUGUGU-AUAGUGGUCGA-AACCUGCCCAGUGCUG-G-U
ACCUGAAAGCUCCG-------------CUCA-------------AGGAGAAGAAGGGC--
CAGUAAAC-GGCGGGGGUAACUAUGACCCUCUCAAGGUAGCGUAAUACCUAGCCGCU-UA
AUUGGCGGCUUGCAUGAA-GGUUCAACGAGA--GUCCCACUGUCCCCGCG----UUC-AG
CCCCGUGAAAUUAAUGUACUGGUGCACAAUCCAGUCUCUCCCACGUGAAAGCGAAGU-CC
CCGUGGAGC-UUUACUGCAGCCUGUAGCUGUGACGCGAUUCUCAAUGCGUAGGGU-AGGA
AGGAGCCAUCG---AAGUUCC-GGU----------------------------UGUG---
-----------------------------------GC-CGGAAUGGAGGC-GA-CGAUGA
AACA-CUUCC-CUUUGGGAGUUGCGUCACUAACCU-U----------GCAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------AAGGGACA-ACUAUUGGUGGG
CAGUUUGGGUGGGGCGCCACGCCUCUAA-CAAUCCAAC-AGAGGCCUCCAAAGGUCAGCU
CAGGAGGGUCAGAAAUCCUCCGUA-GAGUA-UAAAGGCAA-AAGCUGGCUUGACA-GUGU
----------------------------------UCCAGACAAUAAGGAACGCUGAUGCG
AAA-GCAGGGCUUAGCGAACCACC-----------UUGUCUCCCUC-UUC----------
----------AUGAGGGCAGGUGAUAAGAG-AG--AAGUUACCCCAGGG-AUAACUGAGU
UGUCCUCGGCAAGAGUACACAUCGACCCGAGGGUUUGCUACUUCGAUGUCGUCUGUUCCU
AUCCUGGCGCUGCAUAAGACGCCAAGGGUGGGGCUGUUCGCCCAUUAAAAGGGAUCCUGA
GAUGGGUUCACUACGUCGCGAGACAGUAGGGUUGCUUCUCCGU-----------------
---G-GGA--------------------------------------GUGC-UCGAUGCCU
GAAGGGAAGG-AGCCUUUAGUACGAGAGGAA-CGGGGGUUCGUGGCCUC-UGGUU-UACC
GGUUGUCC-GACA-GGGCAGUU-GCCGGGUAGCUACGCCAUACGCGAAUAAAGGCUGAAA
GCA-UC--UAAGCCUGAAGUCGCCCCUGA-A-A-AGAGGCAUC-GU--------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----UAUC-AGG----UCCCUCCUAAAAGAGGAGCU-UGAUAGGAC-CGGGAUGUAAG-U
GC-U--------GAG-----CU--------UUUG--------CGAGGCAUUAAGUCC--A
CGGUUACUAAAA--GACCG---------------
>Pyrobaculum_calidifontis
-CUCC-GCACGG--CAAAGCCGCCC-GGUGGAUG-GCUCGGC-UCGG-G---CGCCGAAG
AAGGGCGUGG-CAAGCUGCGAUAAGCCCGGGGUAGCCGCAGGCAGGCUU-----AGAAC-
CCG-GGAUCCCCGAAUGGGGCU-UCCU--GC----CGGGG-CCG---------AAU----
----AGG---C----C----C---CGGC-G-CCCC-------------------------
------GUAA------------------------------------G-G-GG-CGGGAAC
GCGGGGAAAGGAAACAUCUUAGUACCCG--CAGGAAGGGAAGCCAA-CAGGGACCCCCUG
AGU-AG-GGGCGACCGAAAGGGGG-A-UA-GCCCAAACCAAAUCCUCGCGGGA-------
CAAC---CGU-GGGGAGAUGUGGGG--CUU-------G-GG--CCCGGGC-----A----
---------------------ACCGCCGG-----------CG--GG-------CGGUA--
GCCG------AAGUGG-GCUG---------------------------------------
----GAAUG-CCCCG-------CCGUAGAGGGUGAUAGCCCCGUA---------GGC---
G--AAAC------CGCCCGUG-GCGGAG--------------UCCCGGGGUCCCGGAGUA
CCUCGGCUUA---GUUUUGCCGGGGGAA-CGCGCCGGCCACU--GGCCGGCAAGGCUAAG
CA--CGU-C-CCGAGUCCGAUAGC-GCAC-U-AGUACCGUGAGGGAAAG-CUGAAA-AGA
AC-CCCGG-AAGGGG-G-GUG-AAAAGAGCCUGAAACCGGGCGGCUACAG-UG-GG-GCA
G---GCCCGAAA-GGAUG------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CC-CCCUCCC--G-------------------AA------GG-AA---
---A------CC------------------CCG---------------------------
------------------------------------------------------------
--------------------------------------GUGA------------------
------------------------------------------------------------
------------------------------------------------C-GG------GG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGAGGG-GG----
-------------UCCAG--GGUCUGCCCUUACGUCUAGAAACACGGGCCGGGGAGUUCA
-C-GGCCGUGGCGA-GCCUAAGGGG--------UUCAA--------CCCCGGA--GGCGU
AGGGAAAC-CGACA-----------------------GCCCG-CAGCGGGG---------
-----------------------------------------------CAACCCG------
------------------------------CGA-GGGGCG-GGGUCU-------------
----------------------UAAA--------------------------GG-G-CCC
----------------------GUAGUCACGGCCGUGA-GACCAGAAACC-GGGCGAUCU
AGCCCUGGGCAGGGUGAAGCGGGGCGAAAG-CCCCGUGGAGGCCCGA--AGGGGUUCUGA
UGUGCAAAUCGUUCCCAUGACCUGGGGCUAGGGGCAAAAGACCAAUCAAGCCCGG-UGAU
AGCUGGUUCCCCCCGAAGCGGGUCUCAGCCCGGCCUCCC-CGGA----------------
------------------------------------------------------------
-GGCG-GCCGGCGGGGUAGAGU-ACUGAUCGGG-GGUG-CGGGAGC-C-GA-AA-GGCU-
C-CGGCCCCCGGUCAAACUCCGAACCUGCCA-----------------------------
------------------------------------------------------------
----------------------G-CG-C--CG-UAGAAGGGGGG-AGGCGGGGG-CGGU-
G-GGG-UAAGCCUCCG-CUCCGAGAC-GGGAAC---AACCGAGACCGG-GGUUAAGGCCC
CCAAGU--GC-GGG-CU-UA---GU-GUCAAUC-UAAAAGGGCGUCCCCCGCCCAAGACA
GCGGGGCCGUGGGCCUAACAGCAGCCA-UCGGCUAAGCAACGCGUAACAGCGGACCCGCC
-----GAGGCGGGGGGCCCCGAAGAU-GUACAGGGACU-A-AGCCCGC----------CG
CCGAG-ACCCCGGCCCGCGGGC--------------------------------------
------------------------------------------------------------
--------------C-GUUG----------------------------------------
-----------------------------------------------------GCCCGCG
UG-GGGUAGGGGGGC-GCGGCCG-U-G-GGGCA-GAAGCCG--G-GCCGUGAGGU--C-C
GGUGGACCCG-CGG-CCGACGAAGAUCC-CGGCGG-UAGUA-GCAGCG-AAGAG-GGGUG
A--G---------------AAGCCC-CUC-CGCCGGAAAGGAC-CAGGGUUUC-CUGGCA
ACUUCAAUAGGCCAGGAGUUAGCCGG--UC-CUAAGGCGGGGCCU-AAU-AGGC---ACC
C-----------------------------------------------------------
-------------------------------------GCC-GA-A-AGGGA-AACGGGUU
-AAUA-UUCCCGUGCCGCG----GGGGUAGGU-UCU------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AG---GC--------------------CCCG-UCCCC-GACGCCUCGGGAUA
GG-GCGGGCGGG-AC-------UGCC-----G-UCCCGC-UUAA-C-CGUCG-----A-A
-----GG-----CC----------------GGGG-AGU-G-CC-----------------
---GUAAU-GGCGAGAACC-----GGCCGA----AGGCG-GGA-AUA--GC---------
------------------------------------------------------------
-CGGGG--GUUUCCCCGGUC-CGCC-C-G-ACUCCUGGGGCCC-GUGAAA-A-GGGGACG
GGGAA--------------------------------------------------CGAGC
C-CCCGCGCCCGUACCGAGAACCGACGCAGGUGCUCCUGGGU-GAGAAGCCCAAGGC-GG
CUCGGG-UGACCCCGG-GCCAGGGAACUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAG
GGCGCG-GCGG-A-GG--AUUU------AAUU----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------UAUUCC--CGAGGGGCA--GGUCGC
AGUGGCAAGGGGGACCUGA-----CUGUUUAACAAAAACAUAGGUCCCCGCGAGCCCG--
--UA-A-------------GGGUGUGU-ACGGGGGCUGA-AUCCUGGCCACUGGCG-G-U
ACGUGAACCCCGGG-------------UACA-------------ACCGGGCGAAGCGC--
CGCUGAAG-GCCGGGGGUAACUCUGACCCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UA
AGGGCCGGCGUGCAUGAAUGGAUCAACGAGG--UCCCCACUGUCCCGGCC----CGG-GG
CCCGGCGAACCC-ACCUCCAGGUGCACAGUCCUGGGACCCCCGACGGGGCGAGAAGU-CC
CUAUGGAGC-UUCACAGCAGCCUGUCGUUGCGGGGGGGCGGGGGGUGCAGAGCGU-AGGU
GGGAGCGAU-G---AAACGGG-GUC----------------------------UCCG---
-----------------------------------GG-CCCCGUGGAUGC-GA-CCCUGG
AACA-CCACC-CACUCUCCGCCCCUCCGCUUACCC-GC--C------GCAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------G--------------------
--------------------------------------GCGGGGACA-GCGGCAGGCGGG
CUGUUCGGCUGGGGCGGCACACCCCUGA-AAAGAUAUC-GGGGGUGCCCAAAGCUCGGCU
CAGGCGGGUCAGAAAUCCGCCGUA-GAGUG-UAAGGGCAA-AAGCCGGGCUGACU-GGGC
----------------------------------CCUUGAACGCAAGGGGCCCAGGCGGG
AAA-CCGGGGCCUAGAGAACGCUC-----------GUG---CCCCCACCA----------
----------GUGGGGGCCGGGCAUGACAG-AA--AAGUUACCCUAGGA-AUAACCGGCU
CGUCGCGGGUGAGAGUCCCCAUCGACCCCGCGGUUUGGUACCCAGACGUCGUCUCUUCCC
AUCCUGGCGGUGCAGCAGCCGCCAAGGGUGGGGCUGCCCGCCCAUUAAAGGGGAACGUGA
GAUGGGUUCAGACCGUCGCGAGACAGGUCGGUCUCUACCUGUC-----------------
---G-GGG--------------------------------------GCGC-UGGCCGCCU
GAGGGGAAGG-UGCCCUCAGUACGAGAGGAA-CGGGGCGCCGCGGCCUC-UAGUG-UACC
GGUUGUCC-GGCA-GGGCAC-U-GCCGGGCAGCCACGCCGUG-GGGGAUAACCGCUGAAA
GCA-UC--UAAGCGGGAAG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------CCCGUAGAAGACGGGGU-UGA--GGGG-GGCGGUGUAAC-C
CC-C--------GAG-----GGU-------UUCC--------CGAGGGGAG-AGCCG--G
CCCCUCCCAAUC--GCCCGA--------------
>Pyrococcus_furiosus
-GGGCUAGGACG--CUAAGCCGCCC-GGUGGAUG-GCUCGGC-UCGGGG---CGCCGACG
AAGGGCGUGG-CAAGCUGCGAUAAGCCCCGGCGAGGCGCAGGCAGCCGU-----CGAAC-
CGG-GGAUUCCCGAAUGGGACC-UCCC--GC----GGC--------------UUAU----
--------------------G---CCGC-A-CUCC-GGG---G-----------------
------UUUAU------------------------------CC-CCG-G-AG-GGGGAAC
GCGGGGAAUUGAAACAUCUUAGUACCCG--CAGGAAAAGAAAGCAA-AAGCGAUGCCGUG
AGU-AG-GGGCGACCGAAAACGGC-A-GA-GGGCAAACUGAACCCCGGGCCGA-------
CGAG---GUU-CGGGGGAUGUGGGG--UUG-------U-AG--GGCCCCC-----G----
--UAU---------------GAGACCCUC-----------GC--GG-------GUGAA--
GCCG------AAGUCC-GCUG---------------------------------------
----GAACG-CGGCG-------CCGGAGAGGGUGAUAGCCCCGUA---------GGC---
G--UAAG------CCCGCAGG-GU------------------CUCGGGGGACCCUGAGUA
CCGUCGGUUG---GAUAUCCGGCGGGAA-GCUGGGAGGCAUC--GGCUCCCAACCCUAAA
UA--CGU-C-CCGAGACCGAUAGC-GAAC-U-AGUACCGUGAGGGAAAG-CUGAAA-AGC
AC-CCCGG-GAGGGG-G-GUG-AAAAGAGCCUGAAACCGGGCGGCGAUAG-GAGGG-UGC
G---GCCCGAAA-GGAAUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AG-CCUCCCC--G-------------------AA------GG-AA---
---A------CC------------------GCG---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------C-GC------GG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGGAGG-GG----
-------------ACCGG--GGUUGCACCGUCCGUCUUGAAACACGGGGCAGGGAGUUCG
-C-GGCCGUGGCGA-GGUUAAGGGGG--------UUAA-------GCCCCGUA--GCCGC
AGGGAAAC-CGACAU----------------------GCCCG-CAGCCGGG---------
-----------------------------------------CU--UAUGCCCGG------
------------------------------UGA-GGGGCG-GGGUGC-------------
----------------------GAAA--------------------------GC-G-CCC
----------------------GGAGUCACGGCCGCGA-GACCCGAAACC-GGUCGAUCU
AGCCCGGGGCAGGGUGAAGUCCCUCAACCG-AGGGAUGGAGGCCCGC-UAGGGGUGCUGA
UGUGCAGUUCGCUCCCGUGACCCCGGGCUAGGGGUGAAAGGCCAAUCGAGGCCGG-AGAU
AGCUGGUUCCCGCCGAAUCAUCCCGCAGGAUGGCCUCCC-CGGA----------------
------------------------------------------------------------
-GGUA-GGCGGUGGGGUAGAGC-ACUGAUUGGA-GGUG-CAGGGGG-C-GA-AA-GCCC-
C-CGGCCUCCUGUCAAACUCCGAACCCACCG-----------------------------
------------------------------------------------------------
----------------------C-CG-C--CG-UAGAUGGGGGG-AGUAGGG---UGGC-
G-GUG-UAAGCC-GUC-CACCGAGAG-GGGAAC---AACCCAGACCGG-GGUUAAGGCCC
CAAAGU--GC-CGG-CU-AA---GU-GUUACU--CCAAAGGGUGUCCCGGGCCUUAGACA
GCGGGGAGGUAGGCUUAGAAGCAGCCA-UCCUUUAAAGAGUGCGUAACAGCUCACCCGUC
-----GAGGUCCGGGGCCCCGAAAAU-GGAC-GGGGCUCA-AGCCGGC----------CG
CCGAG-ACCCCGGCGCACGGAC--------------------------------------
------------------------------------------------------------
--------------CGAUUG----------------------------------------
----------------------------------------------------GUCCGUGA
UC-GGGUAGGCGGGC-GUGCCGG-U-G-GCGUA-GAAGCCG--G-GCCGUAAGGU--C-C
GGUGGAGCCG-CCG-GUAUCGCGGAUCC-UGCCGG-GAGUA-GCAGCG-UAGUC-GGGUG
A--G---------------AAUCCC-GAC-CGCCGG-AGGGGC-CAGGGUUCC-ACGGCA
AUGGUCGUCAGCCGUGGGUUAGUCGG--UC-CUAACCCCGCCCGU-AAC-UCGG---CGC
G-----------------------------------------------------------
-------------------------------------GGG-GA-A-AGGGA-AACGGGUU
-UAUA-UUCCCGUACCGCG----GGGGUAGG----U------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AA---GC--------------------CCGG-AGGGU-GACGCCUCGGGGUA
GG-CGGACCGGC-C-------GAUGA-------GGCCGG-CUAA-G-CGUAU-----A-A
-----GC-----CC----------------GGGG-AGU-G-CC-----------------
---GUAAU-GGCGAGAACC-----GGGUGA----AAGCG-CGA-AUGG-CC---------
------------------------------------------------------------
-CCCCC--GUUAGGGGGGUU-CCGC-C-G-AUCCCUGGGGCCC-GUGAAA-A-GCCCUCC
GGGAAU-----------------------------------------------UCCGAUC
C-CCCGCGACCGUACCGAGAACCGACACAGGUGCCCCUGGGU-GAGAAGCCUAAGGC-GU
GUCGGGGGAAACCCGG-CCGAGGGAACUCGGC-AAACUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUG-C-GG--GUG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------CG--UAACCCGCA--GGUCGC
AGUGACUAGGGGGGCCCGA-----CUGUUUAAUAAAAACACAGGUCCCAGCUAGCCCG--
--AA-A-------------GGGUUUGU-ACUGGGGCCGA-CGCCUGCCCAGUGCCG-G-U
AUGUGAAGCCCGGG-------------UACA-------------ACCGGGUGAAGCAC--
CGGUAAAC-GGCGGGGGUAACUAUAACCCUCUUAAGGUAGCGAAAUUCCUUGUCGGU-UA
AAUGCCGACCUGCAUGAAUGGCGUAACGAGG--UCCCCGCUGUCCCCGGC----CGG-GG
CCCGGCGAAACC-UCUGCCUGGCGCGCAUGCCAGGGACCCCCGGUGGGAAGCGAAGA-CC
CCAUGGAGC-UUUACUGCAGCCUGCCGUUGCCACACGGCGGGGGGUGCGCAGCGU-AGGC
GGGAGGCGUCG---AAGCCCG-GCC----------------------------UCCG---
-----------------------------------GG-UCGGGUGGAGCC-GU-CCAUGA
GACA-CCGCC-CACUCCCCGCUGUGUGGCUAACCC-CC---------GAAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GGGGGGACA-GCGGUAGGUGGG
CAGUUUGGCUGGGGCGGCACGCCUCCGA-AAAGGUAUC-GGAGGCGCCCUAAGGUCGGCU
CAGGCGGGUCAGGAAUCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACU-GGAC
----------------------------------CCGUAACAGAGGCGGGUCCAGCCCCG
AAA-GGGUGGCCUAGCGAACCCCU-----------GUG---CCUCC-CCG----------
----------GUGGGGGCCAGGGAUGACAG-AA--AAGCUACCCUGGGG-AUAACAGAGU
CGUCUCGGGCGAGAGCCCAUAUCGACCCCGAGGCUUGCUACCUCGCUGUCGGCUCUUCCC
AUCCUGGCCCUGCAGCAGGGGCCAAGGGUGGGGGUGUUCACCCAUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGAUGCUAUCUACC-----------------
---G-GGG--------------------------------------GUGU-UGGCCGCCU
GAGGGGAAGG-UGCCCCUAGUACGAGAGGAA-CAGGGUGCCGCGGCCUC-UGGUC-UACC
GGUUGUCC-UCCC-GGGCAU-C-GCCGGGCAGCUACGCCGCA-GCCGAUAAGGCCUGAAA
GCA-UC--UAAGGCCGAAGCGGCCCCCGA-A-AAUAGGCGGCC-GU---UCCCUGGCG--
---------------------------CUUGGGCCUGGGCGACCGGC-------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------CCA-UUGCCA
GGGA--CG-AGG----GCUCGGGUAGAAGACCCGGU-UGAUAGGGC-GGGGAUGUAAG-C
GG-G--------AAGG----GU---------CAA-------CCGACCCGCUUAGUCC--G
CCGCCCCUAAUC--GCCCGAGGU-CCUGCCC---
>Staphylothermus_marinus
-----------C--CGACGCCGCCC-GGUGGAUG-GCUCGGC-UCGG-G---CGCCGAGG
AAGGCCGUGG-CAAGCUGCGAUAAGCCCGGGGUAGGCGCAUGCAGCCGU-----UGAAC-
CCG-GGAUCGCCGAAUGGGACC-UCCU--GC----CACGG-GCG---------AAG----
----AGC---C----C----G---UGGC-G-UCCG-GGA---AACCG-------------
------GGAU--------------------------GGGA-GU-ACC-G-GA-CGGGAAC
CCCCCGAACGGAAACAUCUUAGUAGGGG--GAGGAGGAGAAACCACCACGGGAUCCCCUG
AGU-AG-GGGCGACCGAAAGGGGG-A-GA-GCCCAAACCAAUCCUCCACGGGA-------
UAAC---CGU-GGAGGGAUGAGGGG--UUG-------A-UG--GGUCUCC-----G----
--GC-GGGGCUUGAGCCCCAGAGGGCCUA-----------UC--CA-------CGGUA--
GCCG------AAGUGG-CCUG---------------------------------------
----GAAUG-GCCCG-------CCGUAGAGGGUGAAAGCCCCGUA---------GGC---
U--AAAC------CGUGGAGG-CCC-----------------UCGCCGGAGACCAGAGUA
CCACGGCUUG---GUUUUGCCGUGGGAA-GCCGGGAGGCACC--GGCUUCCAAGGCUAAA
UA--CGU-C-CCGAGACCGAUAGC-GUAC-UAAGUACCGUGAGGGAAAG-CUGAAA-AGU
AC-CCUGG-AAAGGG-G-GUG-AAAAGAGCCUGAAACCGGGCGGCUACAU-AC-GG-CGC
A---GCCUGGAA-GAGAUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AG-GUCCUCC--A-------------------AA------GG-AA---
---A------CC------------------GGG---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------C-CC------GG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAGGAC-UG----
-------------AUCAG--GGUUGCGCCGUCCGUCUUGAAACACGGGCCGGGGAGUCCA
-C-GGCAGUGGCGA-GCCUAAGGGGG-------ACAAA-------GCCCCGUA--GGCGU
AGGGAAAC-CGACAA----------------------GCCCG-CAACCGGG---------
-----------------------------------------CG----CAAGGCG------
------------------------------UGA-GGGGCG-GGGUCC-------------
----------------------UCAUA-------------------------GG-G-CCC
----------------------GGAGUCACUGCCGUGG-GACCAGAAACC-GGGCGAUCU
AGGCGGGGGCAGGGUGAAGCCGGGGGAAAC-CCCGGUGGAGGCCCGC--AAGGGUUCUGA
CGUGCAAUUCGUUCCCCUGACCCCCGUCUAGGGGCAAAAGACCAAUCUAGCCCGG-UGAU
AGCUGGUUCCCGCCGAAGUGGCUCUCAGGCCAGCCCCGC-CAGA----------------
------------------------------------------------------------
-GGCU-GGCUACGGGGUAGAGCUACGGAUUGGG-GGUG-CAGGGGG-C-GA-AA-GCCC-
C-CGGCCCCCUAUCCAACUCCGAACCCGUGG-----------------------------
------------------------------------------------------------
----------------------C-CG-C--CG-CAGAAGGCGGG-AGUGGGGCU-CCCC-
G-GGG-UAAGCCCGGG-GGCCGAGAG-GGGAAC---AACCCAGACCGG-GGUUAAGGCCC
CAAAGU--GC-CGG-CU-AA---GU-GCCAAGC-CCAAAGGGCGUCCCGCGGCUUAGACA
GCGGGGAGGUGGGCCUAACAGCAGCCA-UCCUCUAAGGAGUGCGUAACAGCUCACCCGCC
-----GAGCCGCGGGGCCCCGAAGAUUGGUC-GGGGCUCA-AGCCGGC----------CG
CCGAG-ACCCCGGGGCACGGCU--------------------------------------
------------------------------------------------------------
--------------CCGAUG----------------------------------------
---------------------------------------------------GAGCCGUGA
UC-CGGUAGGCGGGC-GCCGGGU-C-G-GGGCA-GAAGCCG--G-GCCGAGAGGU--C-C
GGUGGACCCG-AUC-CGGGUGUGGAUCC-CGGCGG-CAGUA-GCAGCG-AAGAG-GGGUG
G--A---------------AAUCCC-CUC-CGCCGGAAAGGGC-CAGGGUUCC-UCGGCA
ACGGUCGUCGGCCGAGGGUUAGCCGG--CC-CUAACCCGGGCCGU-AAC-ACGG---ACC
C-----------------------------------------------------------
-------------------------------------GGG-GA-A-GGGGA-AACGGGUU
-AAUA-UUCCCGUGCCGCG----GGGGUAGA----C------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AA---GC--------------------CCGG-CCUCC-GACGCCUCCGGAUA
GG-CGGACCGGG-GG-CACCC-GAAUGGGUGCGACCCGG-CUAA-C-CGGUG-----A-A
-----GG-----CC----------------CUGG-AGA-A-CC-----------------
---GUAAU-GGUGAGAAGG-----GGCCGA----AGCCG-GGA-AUG--GG---------
------------------------------------------------------------
-ACCCC--GUAUGGGGUCUU-CCGC-U-G-ACUCCGGGGGCCC-AUGAAA-A-GGGGGCC
GGGAA--------------------------------------------------CGAUC
C-CCCGCGUCCGUACCGAGAACCGACACAGGUGCCCCUGGGU-GAGUAGCCCCAGGC-GU
CUGGGGGAUAACCCGG-GCCAGGGAACUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCCG-C-GG--UCUG---GAGGCAA----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------AAACCC--UGGACCGCG--GGUCGC
AGUGCCUAGGGGGGCCUGA-----CUGUUUAAUAAAAACAUAGGUCCCCGCAAGCCCG--
--AA-A-------------GGGUGUGU-ACGGGGGCUGA-AUCCUGGCCACUGGCG-G-U
CCGUGAAACCGGGG-------------UACA-------------ACCCGGCGAAGCGC--
CGCUGAAG-GCCGGGAGUAACUCUGACUCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UG
AGUUCCGGCGCGCAUGAAUGGAUCAACGAGG--UCCCCACUGUCCUGGCC----CGG-GG
CCCCGCGAAUACACGGAGCCGGUGCACAGGCCGGCAACCCCCCGCAGGGCGAUAAGA-CC
CCGUGGAGC-UUCACCGCAGCCUGGCGUUGGCCUCCGGGCUGCGGCGCGUAGCGU-AGGU
GGGAGCCAGUG---AACCCGC-CCC----------------------------UCCG---
-----------------------------------GG-GGCGGGGGAGGC-GC-CAAUGA
AACA-CCACC-CACCGCAGCCCGGAGGCCUUACCC-CC--GGG--G-AGAU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------C----CC--------------------
--------------------------------------GGGGGGACA-GCGUCAGGUGGG
CGGUUUGGCUGGGGCGGCACGCCCGCGA-AAAGGUAAC-ACGGGCGCCCAAAGGUCGGCU
CAGGCGGGUCAGAGCUCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCUUGACC-GGAC
----------------------------------CCCGGAACACAACGGGUCCGGCCGGG
AAA-CCGCGGCCUAGCGAACGCUC-----------GUG---CCCCCCUCG----------
----------GUGGGGGCCGGGCAUGACAG-AA--AAGUUACCCCGGGG-AUAACAGAGU
CGUCGCGGGCGAGAGCUCCCAUCGACCCCGCGGUUUGCUACAUCGAUGUCGGCUCUUCCC
AUCCUGGGAGUGCAGCAGCUCCCAAGGGUGGGGCUGCCCGCCCAUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACA-GUCGGACUCUACCCGCG-----------------
---G-GGG--------------------------------------GUGU-GGGCCGCCU
GAGGGGAAGG-UGCCCUCAGUACGAGAGGAA-CGGGGCGCCGCGGCCAA-UGGUG-UACC
GGUUGUCC-GGCA-GGGCAU-A-GCCGGGCAGCCACGCCGUA-GGGGGUAACCGCUGAAA
GCA-UC--UAAGCGGGAACCCCUCCCCGA-A-AAGAGGCGGCC-GU---CCGCCGAAG--
------------------------------G-----GGUUU-C-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------CUCUUC
GGCG--GG-AGG----GCUCCCGUAGAAGACGGGGU-UGAUGGGGC-GGGGGUGUAAG-C
CC-C--------GAG-----GGAGCAUUGUCUCC--------CAAGGGGUUUAGCCC--G
CCGCUCCCAAAA--GCCCGACGC-CGCA------
>Sulfolobus_acidocaldarius
----------GC--CGAAGCCUCCC-GGUGGAUG-GCUCGGC-UCGG-G---CACCGAAG
AAGGGCGCGG-CAAGCAGCGAAAUGCUCGGGUGAGGCGCAAGCAGCCGU-----UGACC-
CCG-AGGUCCCCUAAUGGGAUA-UCCU--GC----CGG--------------GUUU----
--------------------C---CGGC-G-CUCC-CGG---U-----------------
------UUAUA------------------------------AC-UGG-G-AG-UGGGAAC
CCCCCGAACGGAAACAUCUUAGUAGGGG--GAGGAAAAGAAAUCAA-UUGAGAUCCCCUG
AGU-AG-GGGCGACCGAAAGGGGG-A-CA-GCCCAAACUAAACCUGCCGAUGA-------
UAAG---UCG-GUGGGGAUGUGGUG--UUA-------C-GA--CCUCUAG-----C----
--CU--GAGGUUCGACCUCGGCUUUCCUA-----------AC--CU-------AUCUA--
GCCG------AACUCC-CCUG---------------------------------------
----GAACG-GGGGG-------CCAUAGAGGGUGAAAGCCCCGUA---------GGC---
U--AAAG------AUAGGUGG-AAA-----------------GUGGCUAGAGGUAGAGUA
CCAUCCCCUG---GUUUGGGGGUGGGAA-GUUAGGGGACACG--UGCCUCUAAGGCUAAA
UA--UGU-C-CCGAGACCGAUAGC-AAAC-UAAGUACCGUGAGGGAAAG-CUGAAA-AGA
AC-CCCGG-AAGGGG-GAGUG-CAAAGAGCCUGAAACCGGGUGGUUAUAC-AG-GG-UGU
G---GCUCGAAA-GAAGUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AA-CCCUUCC--G-------------------AA------GG-AA---
---A------GG------------------GGC---------------------------
------------------------------------------------------------
--------------------------------------GCAA------------------
------------------------------------------------------------
------------------------------------------------G-CC------CU
--------UAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GAAGGG-CG----
-------------AUCGG--GGUCACGCCUUUCGUCUUGAAACACGGGCCGGGGAGUUCA
-C-AUCAGUGGCGA-GCUUAAGGAG--------AUUAU--------CUCCGAA--GGCAU
AGGGAAAC-CAAGU-----------------------GCCCG-CAGCCUAG---------
-----------------------------------------U-----UUCUAGG------
------------------------------CGA-GGGGCA-GGGUCU-------------
----------------------GUCA--------------------------GG-G-CCU
----------------------GAAGCCACUGAUGUGA-GGCUAGAAACC-GGGCGAUCU
AGUCCGGGGCAGGCUGAAGGUGGGGGAAAC-CCCACUGGAGGGCCGAAUAGGGGUUCUGA
CGUGCAAUUCGUUCCCUUGACCUCGGACUAGGGGCAAAAGACCAAUCUAGCCCGG-UGAU
AGCUAGUUCCCCCCGAAAUGCGUCCUAGCGCAGCCUCCC-UAAA----------------
------------------------------------------------------------
-GGCA-GCUCGCGGGGUAGAGUGACAGAUCGGG-GGC--UCC-AGG-C-GA-AA-GCCU-
G-GGGCUUCCGGUCUAACUCCGAACCCACGA-----------------------------
------------------------------------------------------------
----------------------G-CG-C--CG-AAGAAGGGGGG-AGUGGGU-C-ACUC-
G-GCG-UAAGGUUGGG-UGGCAAAAG-GGGAAC---AACCCAGACCUG-GGUUAAGGCCC
CAAAGU--CC-CGG-CU-AA---GU-GCCAA---CGAAAAGGCGUCUCCAGCCUUAGACA
GCGGGAAGGUGGGCCCAGCAGCAGCCA-UCCUCUAAGGAGUGCGUAACAGCUCACCCGCC
-----GAGGCUGGAGGCCCUAAAGAUUGGUC-GGGGCUCA-AGCCGGG----------CG
CCGAG-ACCCAGGAGGGGGUCU--------------------------------------
------------------------------------------------------------
--------------CUACUA----------------------------------------
-----------------------------------------------------GAGAUCC
UC-UGGUAGGGGGGC-GCUGUGA-U-G-GGGUA-GAAGGUG--G-GUCGUGAGAU--C-C
ACUGGACCCG-UCA-CAGGUGCAGAUCC-CGGCGG-UAGUA-ACAGCG-AAGGG-GGGUG
A--G---------------AAUCCC-CCU-CGCCGG-AAGGGC-AAGGGUUUC-CCGGCA
ACGUUCGUCAGCCGGGAGUUAGCCGG--UC-CUAAGGUAGGGCCU-AAU-AGGU---ACC
U-----------------------------------------------------------
-------------------------------------ACC-GA-A-AGGGA-AAGGGGUU
-AACA-UUCCCCUGCCUCC----CGGGUAGG----U------------------------
-----------------------------------------------GCGG--UAAC---
-----GC-AA---GC--------------------CAGA-CUCCU-GACGGAUUGGGGUA
GG-GAGAGUAGG-AC-------CACC-----G-UCCUAC-CCAA-G-CACUC-----A-A
-----GC-----CC----------------UUGG-AGA-G-CC-----------------
---GUAAC-GGUGAGAAGA-----GGGCGA----AGGUG-UGA-UGG--GC---------
------------------------------------------------------------
-CUUCC--GUUAGGAGGGUU-CUCC-U-G-AUCCCUAGUCCCC-AUGAAA-A-GGGAGUC
UGGAA--------------------------------------------------CGAUC
C-CGGGAGACCGUACCUAGAACCGACACUGGUGCCCCUGGGU-GAGAAGCCCAAGGC-GU
CUGAGGGGUAACCCAG-GCUAGGGAACUCGGC-AAAUUAGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUA-U-CG--UGGU---UU---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------AACAAA--GCCACGAUA--GGUCGC
AGUGACCAGAGGGACCUGA-----CUGUUUAAUAAAAACAUAGGUCCCCGCUAGCCCG--
--AA-A-------------GGGUGUGU-ACGGGGGCUAA-AUCCUGGCCACUGGUG-G-U
UGGUUAAAUCCGGG-------------UUCA-------------ACCGGGCGAAGCCC--
CACCGAAG-GCCGGGGGUAACUCUGACCCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UA
AGUUCCGGCGCGCAUGAAUGGAUCAACGCGG--UCCCUACUGUCCCAGCC----UGG-GG
CCUCGUGAACGCCCUGAGCCGGUGCACAGUCCGGCAUCUCCCUACACCGAGAGAAGA-CC
CCGUGGAGC-UUCACCGCAGCCUGGCGUUGUCCCUCGGGCGUUUAUGCGUAGAGU-AGGU
GGGAGGGGUCG---AACCUGU-CCU----------------------------UUCG---
-----------------------------------GG-GGCAGGGGACCC-GA-AAGUGA
AACA-CCACC-CAUGGACGCUCGAGGGACUAACCU-CU--C------GAAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------G--------------------
--------------------------------------AGAGGAACA-ACGUCAGGUGGG
CGGUUCGGCUGGGGCGGCACUCCCGCGA-AAAGAUAAC-ACGGGAGCCCAAAGGUCGGCU
CAGGCGGUACAGAACGCCGCCGUA-GAGCG-CAAGGGCAA-AAGCCGGCCUGACG-UGAC
----------------------------------CCUUCCAAGUACGGGGUCACGACGCG
AAA-GCGGGGCCUAGCGAACGCUC-----------GUG---CCCCCACAC----------
----------GUGGGGGCCGGGCAUGACAG-AA--AAGUUACCCCGGGG-AUAACAGGGU
CGUCGCGGGCGAGAGCUCACAUCGACCCCGCGGUUUGCUACAUCGAUGUCGGCUCUUCCC
ACCCUGGAGGUGCAGCUGCCUCCAAGGGUAGGGCUGCCCGCCCGUUAAAGGGGAGCGUGA
GCUGGGUUUAGACCGUCGCGAGACAGGUCGGACUCUAAGGGUA-----------------
---G-GGA--------------------------------------GUGC-GGACCGCUU
GAGGGGAAGG-AACCCCUAGUACGAGAGGAA-CAGGGUUCCGGGGCCUC-CAGUU-UACC
GGUUGUCC-GGUA-GGGCAA-U-GCCGGGCAGCCGCGCCCUG-AGGGGUAACCGCUGAAA
GCA-UC--UAAGCGGGAACCCCUCCCCUA-A-AAGAGGCGGUC-AG---GCGUUA-----
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-GCC--GG-GGC----CUUCCCCUAGAAGAGGGGGU-UGAUGGGGU-GGGGAUGUAAG-C
UC-C--------AAG-----GUUGU----AAGAC--------CGAGGAGUUUAGUCC--G
CCACUCCCAAUC--AGGCUCCCC-CC--------
>Sulfolobus_tokodaii
-CC---AGGGGC--UGACGCCACCC-GGUGGAUG-GCUCGGC-UUGG-G---CGCCGAAG
AAGGGCGCGG-CAAGCUGCGAAAUGCCCGGGUUAGGCGCAAGCAGCCGU-----UGACC-
CCG-GGAUCCCCGAAUGGGAUA-UCCU--GC----CGG--------------GUUA----
--------------------C---CGGC-G-CUCC-CAG---C-----------------
------UCCU-------------------------------GCAUGG-G-AG-CGGGAAC
CCCCCGAACGGAAACAUCUUAGUAGGGG--GAGGAAAAGAAAUCAAAUCGAGAUCCCCUG
AGU-AG-GGGCGACCGAAAGGGGG-A-GA-GCCCAAACCAAACCUGCCGGUGA-------
UAAG---CCG-GUGGGGAUGUGGUG--UUA-------U-UG--GCCUCUG-----G----
--CCU-GGGGUUCGACCCCAACCUCCCUA-----------GC--CC-------UCUGA--
GCCG------AACUCC-CCUG---------------------------------------
----GAAUG-GGGGG-------CCAUAGAGGGUGAUAGCCCCGUA---------GGC---
G--AAGG------A-GGGUGG-GAG-----------------GUGGCCAGAGGCAGAGUA
CCAUCCCCUG---GUUUGGGGGUGGGAA-GUUGGGGGACACG--UGCCUCCAAGGCUAAA
UA--CGU-C-CCAAGACCGAUAGC-GAAC-UUAGUACCGUGAGGGAAAG-CUGAAA-AGA
AC-CCCGG-AAGGGG-GAGUG-AAAAGAGCCUGAAACCGGGUGGUUACAG-AG-GG-CAG
G---GCUCGAAA-GGGGUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AG-UCCACCC--G-------------------AA------GG-AA---
---A------GG------------------GCU---------------------------
------------------------------------------------------------
--------------------------------------GUGA------------------
------------------------------------------------------------
------------------------------------------------A-GC------CC
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGUGGA-UG----
-------------ACCGG--GGUCCUGCCUUUCGUCUUGAAACACGGGCCGGGGAGUUCA
-C-GCCAGUGGCGA-GCUUAAGGGG--------GUUAA--------CCCCGAA--AGCGU
AGGGAAAC-CGAGC-----------------------GCCCG-CAACCCGG---------
-----------------------------------------GA----AACCGGG------
------------------------------UGA-GGGGCG-AGGUCC-------------
----------------------GUCA--------------------------GG-G-CCU
----------------------GGAGUCACUGGCGUGA-GGCUAGAAACC-AGGCGAUCU
AGUCCGGGGCAGGCCGAAGUCGGGGGAAAC-CCCGAUGGAGGGCCGAAUAGGGGUUCUGA
CGUGCAAUUCGUUCCCCUGACCCCGGACUAGGGGCAAAAGACCAAUCUAGCCUGG-UGAU
AGCUAGUUCCUCCCGAAAUGCGUCUUAGCGCAGCCUCCC-UGGA----------------
------------------------------------------------------------
-GGUC-GCCCGCGGGGUAGAGUGACAGAUCGGG-GGU--UCC-AGA-C-GA-AA-GUCU-
G-GGGCUCCCGGUCUAACUCCGAACCCACGG-----------------------------
------------------------------------------------------------
----------------------G-CA-C--CG-AAGAAGGGGGG-AGUGGGU-C-ACCC-
G-GCG-UAAGGUUGGG-UGGCAAAAG-GGGAAC---AACCCAGACUCG-GGUUAAGGCCC
CUAAGU--GC-CGG-CU-AA---GU-GCCAA---UCAAAAGGCGUCCCCAGCCUUAGACA
GCGGGAAGGUGGGCCCAGCAGCAGCCA-UCCUCUAAGGAGUGCGUAACAGCUCACCCGCC
-----GAGGCUGGGGGCCCUGAAGAUUGGUC-GGGGCUCA-AGCCGGC----------CG
CCGAG-ACCCGAGGGGUAGGUC--------------------------------------
------------------------------------------------------------
--------------CCACUG----------------------------------------
-----------------------------------------------------GGACCUA
CU-CGGUAGGGAGGC-GCUGCGG-U-A-GGGCA-GAAGGUG--G-GCCGAAAGGU--C-C
ACUGGACCUA-CCG-CAGGUGCAGAUCC-CGGCGG-CAGUA-GCAGCG-AGUAG-GGGUG
A--G---------------AAUCCC-CCA-CGCCGG-AAGGGC-CAGGGUUUC-CCGGCA
AUGGUCGUCAGCCGGGAGUUAGCCGG--UC-CUAAGGCGGGGCCU-AAC-UGGU---ACC
C-----------------------------------------------------------
-------------------------------------GCC-GA-A-AGGGA-AAGGGGUU
-AAUA-UUCCCCUGCCUCC----CGGGUAGG----U------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AA---GC--------------------CCGG-CUUCU-GACGGAUCGGGCUA
GG-GGGAGCGGG-GC-------CACC-----G-CCCCGC-CCAA-G-CGCUU-----A-A
-----GC-----CC----------------CUGG-AGA-A-CC-----------------
---GUAAU-GGUGAGAAGG-----GGGCGA----AGGCG-UGA-UGG--GC---------
------------------------------------------------------------
-CUGCC--GUUAGGCGGGUU-CCCC-U-G-AUGCCUGGUCCCC-AUGAAA-A-GGAAGCC
GGGAA--------------------------------------------------CGAUC
C-CGGGAGACCGUACCGAGAACCGACACAGGUGCCCCUGGGU-GAGAAGCCCAAGGC-GU
CUGGGGGGUAACCCAG-GCUAGGGAACUCGGC-AAAUUAGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUA-U-CA--UGGU---CGU--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------UAAACG--GCCAUGAUA--GGUCGC
AGUGACAAGGGGGACCUGA-----CUGUUUAAUAAAAACAUAGGUCCCCGCUAGCCCG--
--UA-A-------------GGGUGAGU-ACGGGGGCUAA-AUCCUGGCCACUGGCG-G-U
UGGUGAAACCCGGG-------------UACA-------------ACCGGGCGAAGCCC--
CGCUGAAG-GCCGGGGGUAACUCUGACCCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UA
AGUUCCGGCGCGCAUGAAUGGAUCAACGAGG--UCCCCACUGUCCCAGCC----UGG-GG
CCCCGCGAACGCCCUGAGCCGGUGCACAGUCCGGCACCCCCCUACACCGAGAGAAGA-CC
CCGUGGAGC-UUCACCGCAGCCUGGCGUUGUCCUCCGGGCGCUCAUGCGUAGAGU-AGGU
GGGAGGGGUCG---AAGCCGC-UCC----------------------------UUCG---
-----------------------------------GG-GGCGGUGGACCC-GA-AAGUGA
AACA-CCACC-CAUGAGUGCUCGGAGGACUAACCU-C----------GAAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GGGGGACA-UCGUCAGGUGGG
CGGUUCGGCUGGGGCGGCACUCCCGCGA-AAAGAUAAC-ACGGGAGCCCAAAGGUCGGCU
CAGGCGGUACAGAACGCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACG-GGAC
----------------------------------CCUCCAAAGUACGGGGUCCCGACGCG
AAA-GCGGGGCCUAGCGAACGCUC-----------GUG---CCCCCACAC----------
----------GUGGGGGCCGGGCAUGACAG-AA--AAGUUACCCCGGGG-AUAACAGGGU
CGUCGCGGGCGAGAGCUCACAUCGACCCCGCGGUUUGCUACAUCGAUGUCGGCUCUUCCC
ACCCUGGGGGUGCAGCUGCCCCCAAGGGUAGGGCUGCCCGCCCGUUAAUGGGGAGCGUGA
GCUGGGUUUAGACCGUCGCGAGACAGGUCGGACUCUAAGGGUA-----------------
---G-GGG--------------------------------------GUGC-UGGCCGCCU
GCGGGGAAGG-UACCCCUAGUACGAGAGGAA-CAGGGUGCCGGGGCCUC-CAGUU-UACC
GGUUGUCC-GGUA-GGGCAG-C-GCCGGGCAGCCGCGCCCUG-AGGGGUAACCGCUGAAA
GCA-UC--UAAGCGGGAACCCCUCCCCUA-A-AAGAGGCGGCC-AG---GCCGCA-----
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------------A
GGCC--GG-GGG----CCUCCCCCAGAAGAGGGGUU-UGAUGGGGU-GGGGGUGUAAG-C
CC-C--------AAG-----GGU------UUUCC--------CGAGGGGUUUAGCCC--G
CCACUCCCAAUA--GGCCCCUCC-CUUGG-----
>Thermococcus_kodakarensis
-CCGG-UGGCAA--CUAAGCCGCCU-GGUGGAUG-GCUCGGC-UCGGGG---CGCCGACG
AAGGGCGUGG-CAAGCUGCGAUAAGCCCCGGCGAGGCGCAGGCAGCCGU-----CGAAC-
CGG-GGAUGCCCGAAUGGGACC-UCCC--GC----GGC--------------UUUU----
--------------------G---CCGC-A-CUCC-C-----------------------
------AGUC-----------------------------------GG-G-AG-GGGGAAC
GCGGGGAAUUGAAACAUCUUAGUACCCG--CAGGAAAAGAAAGCAA-AAGCGAUGCCGUU
AGU-AG-GGGCGACCGAAAGCGGC-A-CA-GGGCAAACUGAACCCCGGGCCGA-------
-AAG---GUU-CGGGGGAUGUGGUG--UUG-------U-AG--GGCCCGC-----G----
--GA-----------------GGAGCCCU-----------GG--GG-------GCGAA--
GCCG------AAGUCC-GCUG---------------------------------------
----GAACG-CGGCG-------CCGGAGAGGGUGAAAGCCCCGUA---------GGC---
G--UAAG------CCCCCGAG-CUC-----------------CUGCGGUGUCCCUGAGUA
CCGUCGGUCG---GAUAUCCGGCGGGAA-GCUGGGAGGCAUC--GGCUCCCAACCCUAAA
UA--CGU-C-CCGAGACCGAUAGC-GAAC-U-AGUACCGUGAGGGAAAG-CUGAAA-AGC
AC-CCCGG-GAGGGG-G-GUG-AAAAGAGCCUGAAACCAGGCGGCGAUAG-GAGGG-UGC
G---GCCCGAAA-GGGUUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AC-CCUCCCC--G-------------------AA------GG-AA---
---A------CA------------------CGG---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------C-CG------UG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGGAGG-UG----
-------------ACCGG--GGUUGCACCGUCCGUCUUGGAUCACGGGGCAGGGAGUUCA
-C-CCGAGCGGCGA-GGUUAAGGGG--------GUCAA--------CCCCGAA--GCCGC
AGGGAAAC-CGACAG----------------------GUCCG-CAGCCCGU---------
-------------------------------------------------AAGGG------
------------------------------CGA-GGGACG-GGGUGU-------------
----------------------GAAA--------------------------GC-G-CCC
----------------------GGAGUCGCUCGGGUGA-GACCCGAAGCC-GGUCGAUCU
AGCCCGGGGCAGGGUGAAGUCCCUCAACAG-AGGGAUGGAGGCCCGC-UAGGGGUGCUGA
CGUGCAAUUCGCUCCCGUGACCCCGGGCUAGGGGUGAAAGGCCAAUCGAGGCCGG-CGAU
AGCUGGUUCCCGCCGAAUUAUCCCCCAGGAUAGCCCGGC-CGGA----------------
------------------------------------------------------------
-GGUA-GGCAGUGGGGUAGAGC-ACUGAUUGGG-GGUU-UAGGGGG-C-GA-AA-GCCU-
C-CGGCUCCCUGUCAAACUCCGAACCCACUG-----------------------------
------------------------------------------------------------
----------------------C-CG-C--CG-UAGAUGGCCGG-AGUAGGG---GGGC-
G-GUG-UAAGCC-GUC-ACCCGAGAG-GGGAAC---AACCCAGACCGG-GGUUAAGGCCC
CAAAGU--GC-CGG-CU-AA---GU-GUUACU--CCAAAGGGUGUCCCUGGCCUUAGACA
GCGGGGAGGUAGGCUUAGAAGCAGCCA-UCCUUUAAAGAGUGCGUAACAGCUCACCCGUC
-----GAGGUCAGGGGCCCCGAAAAU-GGAC-GGGGCUUA-AGCCGGC----------CG
CCGAG-ACCCCGGCGCACGGAC--------------------------------------
------------------------------------------------------------
--------------CGAUUG----------------------------------------
----------------------------------------------------GUCCGUGA
UC-GGGUAGGCGGGC-GUGCCGA-U-G-GGGCG-GAAGCCG--G-GCCGUGAGGU--C-C
GGUGGACCCG-UCG-GUAUUGCGGAUCC-UGCCGG-GAGUA-GCAGCA-UAGCC-GGGUG
A--G---------------AAUCCC-GGC-CGCCGU-AGGGGC-CAGGGUUCC-ACGGCA
AUGUUCGUCAGCCGUGGGUUAGUCGG--UC-CUAACCCGACCCGU-AAC-UCGG---CGU
C-----------------------------------------------------------
-------------------------------------GGG-GA-A-AGGGA-AACGGGUU
-UAUA-UUCCCGUACCGCG----GUGGUAGG----U------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-AA---GC--------------------CCGA-GGGGU-GACGCCUCGGGGUA
GG-CGGACCGGU-C--------CACA-----A-GGCCGG-CUAA-G-CGUAU-----A-A
-----GC-----CC----------------GGGG-AGU-G-CC-----------------
---GUAAU-GGCGAGAACC-----GGGUGA----AAGCG-CGA-AUG--GC---------
------------------------------------------------------------
-CUCCC--GUAAGGGGGGUU-CCGC-C-G-AUCCCUGGGGCCC-GUGAAA-A-GCCCCUC
GGGAA--------------------------------------------------CGAUC
C-ACCGCGACCGUACCGAGAACCGACACUGGUGCCCCUGGGU-GAGAAGCCUAAGGC-GU
GUCGGGGGAAACCCAG-CCGAGGGAACUCGGC-AAAUUGGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUG-C-GG--GUG---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------UG--UAACCCGCA--GGUCGC
AGUGACUAGGGGGGCCCGA-----CUGUUUAGUAAAAACACAGGUCCCAGCUAGCCCG--
--AA-A-------------GGGUUUGU-ACUGGGGCCGA-CGCCUGCCCAGUGCCG-G-U
AUGUGAAGCCCGGG-------------UACA-------------ACCGGGUGAAGCAC--
CGGUAAAC-GGCGGGGGUAACUAUAACCCUCUUAAGGUAGCGAAAUUCCUUGUCGGU-UA
AAUGCCGACCUGCAUGAAUGGCGUAACGAGG--UCCCCACUGUCCCCGGC----UGG-GG
CCCGGCGAAACC-UCUGCCAGGCGCAUAUGCCUGGGACCUCCGGUGGGAAGCGAAGA-CC
CCAUGGAGC-UUUACUGCAGCCUGCCGUUGCCGUACGGCGGGGGGUGCGCAGCGU-AGGC
GGGAGGCGUCG---AAGCCCG-CCC----------------------------UCCG---
-----------------------------------GG-GCGGGUGGAGCC-GC-CCAUGA
GACA-CCGCC-CACCCUCUGCCGUACGGCUAACCC-GC---------GGAA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------GCGGGGACA-GCGGUAGGUGGG
CAGUUUGGCUGGGGCGGCACACCCUCGA-AAAGGUAUC-GAGGGUGCCCUAAGGUCGGCU
CAGGCGGGUCAGGAAUCCGCCGUA-GAGUG-CAAGGGCAA-AAGCCGGCCUGACU-GGAC
----------------------------------CCGUAACAGAGGCGGGUCCAGCCGCG
AAA-GCGUGGCCUAGCGAACCCCU-----------GUG---CCUCC-CCG----------
----------GUGGGGGCCAGGGAUGACAG-AA--AAGCUACCCUGGGG-AUAACAGAGU
CGUCUCGGGCGAGAGCCCAUAUCGACCCCGAGGCUUGCUACCUCGCUGUCGGCUCUUCCC
AUCCUGGCCCUGCAGCAGGGGCCAAGGGUGGGGGUGUUCACCCAUUAAAGGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUCGGAUGCUAUCUACC-----------------
---G-GAG--------------------------------------GUGU-UGGCCGCCU
GAGGGGAAGG-CUCCCCCAGUACGAGAGGAA-CAGGGAGCCGCGGCCUC-UGGUC-UACC
GGUUGUCC-UACA-GGGCAU-A-GCCGGGCAGCUACGCCGCA-GCCGAUAAGGCCUGAAA
GCA-UC--UAAGGCCGAAGCGGCCCCCGA-A-AACAGGCGGCC-AC---UCCUGGGCG--
----------------------------UUGGGCCUGGGCGACCGGU-------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------CCG-UUGCCC
AGGA--CG-AGG----GCCCGGGAAGAAGACCCGGU-UGAUGGGGC-GGGGAUGUAAG-C
GG-G--------AAG-----GG--------AAAC--------CGACCCGUUCAGUCU--G
CCGCUCCCAACA--GCCCGAGUG-CUACCGGGC-
>Thermofilum_pendens
----------CG--CUAAGCCACCC-GGUGGAUG-GCUCGGC-UCGG-G---CGCCGAGG
AAGGCCGUGG-CAAGCGGCGAUACGCCCCGGGGAGCCGCAUGCAGGCUU-----CGAUC-
CGG-GGAUCGCCGAAUGGGACC-UCCU--GC----CGUGG-G----------UCAA----
------C---C----C----A---CGGC-G-CUCG-GGA---AACCC-------------
------GCAA--------------------------GGGGAGU-ACC-G-AG-CGGGAAC
CCCCCCAACGGAAACAUCUUAGUAGGGG--GAGGAGAAGAAACCAA-UUGGGAUCCCCUG
AGU-AG-GGGCGACCGAAAGGGGG-A-GA-GCCCAAACCGAACGUCCAUGCGA-------
AGAG---CAU-GGACGGAUGUGGGG--UUG-------C-AG--GGCCCCG-----C----
--GU-----------------CCCCCCUA-----------GC--CC-------GGAUA--
GCCG------AAGUCG-GCUG---------------------------------------
----GAAAG-CCGCG-------CCGUAGAGGGUGACAGCCCCGUA---------GGC---
U--AAAU------CCGGGUGG-GGG-AU--------------GGCGGGUGUCCCUGAGUA
CCACGGCUUG---GUUUUGCCGUGGGAA-GCUGGGGGGCACC--GACCUCCAAGGCUAAA
UA--CGU-C-CCGAGACCGAUAGC-GAAC-UAAGUACCGUGAGGGAAAG-CUGAAA-AGC
AC-CCCGG-AAGGGG-G-GUG-AAAAGAGCCUGAAACCGGGUGGCGACAG-GU-GG-CGC
G---GCCCGAAA-GGGUAG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AU-CCUCCCC--G-------------------AA------GG-AA---
---A------CC------------------CGG---------------------------
------------------------------------------------------------
--------------------------------------GCGA------------------
------------------------------------------------------------
------------------------------------------------C-CG------GG
--------GAGUACGA--------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------G-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------GGGAGG-GG----
-------------ACCGG--GGUCGCGCCUUACGUCUAGAAACACGGGCCGGGGAGUUCA
-C-GGCUGUGGCGA-GCCUAAGGGGU--------UCAA-------GCCCCGAA--GGCGU
AGGGAAAC-CGACAA----------------------GCCCG-UAGCCAGC---------
-----------------------------------------CG--CAUGGCUGG------
------------------------------UGU-GGGGCG-GGGUCU-------------
----------------------GAAA--------------------------GG-G-CCC
----------------------GUAGUCACAGCCGUGA-GACCAGAAACC-GAGCGAUCU
AGGCCGGGGCAGGGUGAAGCCCGGCGAAAG-CCGGGUGGAGGCCCGA--AGGGGUUCUGA
CGUGCAAUUCGUUCCCAUGACCUCGGCCUAGGGGCAAAAGACCAAUCAAGCUCGG-UGAU
AGCUGGUUCCCCCCGAAGCGGAUCCCAGUCCGGCCCGCC-CUGA----------------
------------------------------------------------------------
-GGUU-GCCGGUUGGGUAGGGC-ACUGAUUGGG-AGUC-CGGGGAC-C-GA-AA-GGUC-
C-CAGCUCCCUUUCAAACCCCGAACCGACCG-----------------------------
------------------------------------------------------------
----------------------G-CA-C--CG-UAGAUGGGCGG-AGACGGGUU-CUGG-
C-GGA-UAAGCCGCCA-GGCCGAGAG-GGGAAC---AACCCAGACCGG-GGUUAAGGCCC
CCAAGU--GC-CGG-CUAAA---GU-GUCAAGC-CAGAAGGGUGUCCCCCGCCUUAGACA
GCGGGGCCGUAGGCUUAGAAGCAGCCA-UCGGCUAAGAAGUGCGUAACAGCUUACCCGCC
-----GAGGCGGGGGGCCCCGAAGAU-UACC-GGGACU-A-AGCCGGC----------CG
CCGAG-ACCCCGGGGCACCCCG--------------------------------------
------------------------------------------------------------
--------------C-AUUG----------------------------------------
----------------------------------------------------CGGGGUGA
UC-CGGUAGGGGGGC-GUCCAGG-U-G-GACUG-GAAGCCG--G-GCCGUGAGGU--C-C
GGUGGAUCCG-CCU-GGAAUGAAAAUCC-CGGCGG-UAGUA-AGAGCGCAAGAG-GGGUG
A--G---------------AAUCCC-CUC-CGCCGA-AAGGGC-AAGGGUUCC-UCAGCA
ACGGUCGUCGGCUGAGGGUUAGCCGG--UC-CUAAGGCGGCCCUU-AAC--CGG---UGC
C-----------------------------------------------------------
-------------------------------------GCC-GA-A-AGGGA-AAGGGGUU
-AAUA-UUCCCCUGCCGUG----GGGU-ACGC-UUU------------------------
-----------------------------------------------GCGG--CAAC---
-----GC-GA---GC--------------------CCCG-CUCCU-GACGCCUCGGGAUA
GG-GGGAGUGGG-AC-------UGCC-----G-UCCCAU-CCAA-G-CGCUG-----A-A
-----GC-----CC----------------GCUG-AGU-G-CC-----------------
---GUCAU-GGCGAGAAGC-----GGGUGA----AGGCG-CGA-UGG--GC---------
------------------------------------------------------------
-CCGCC--GUUAGGCGGGUU-CCCC-C-G-ACUCCUGGGGCCC-GUGAAA-A-GGGAGCG
GGGA---------------------------------------------------AGGAG
C-CCCACGCCCGUACCGAGAACCGACACAGGUGCCCCUGGGU-GAAAAGCCCAAGGC-GU
GGCGGG-GUAACCCAG-GCUAGGGAACUCGGC-AAAUUAGCCCCGUAACUUCGG-GAGAA
GGGGUG-CCUG-C-GG--UCUU---GGGGCAU----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------ACCCCU--GGGACCGCA--GGUCGC
AGUGACAAGGGGGACCCGA-----CUGUUUAAUAAAAACAUAGGUCCCCGCGAGCCCG--
--AA-A-------------GGGUGAGU-ACGGGGGCUGA-AUCCUGGCCACUGGCG-G-U
ACGUGAAACCCGGG-------------UACA-------------ACCGGGCGAAGCGC--
CGCCGAAG-GCCGGGAGUAACUCUGACUCUCUUAAGGUAGCCAAAUGCCUUGCCGGG-UA
AGUUCCGGCGCGCAUGAAUGGAUCAACGAGG--UCCCCACUGUCCCAGCC----UGG-GA
CCCGCUGAACCC-GCAACCAGGUGCAGAGUCCUGGGAGUCCCGGUGGGGCGAGAAGA-CC
CCGUGGAGC-UUCACAGCAGCCUGGCGUUGAGACACGGCUGCGGGUGCGUAGCGU-AGGC
GGGAGCGAU-G---AACCUGG-CCC----------------------------UCCG---
-----------------------------------GG-GUCAGGGGAUGC-GG-CCAUGA
AACA-CCGCU-CACCUGCGGCUGUGUCCCUAACCC-CG--GG-----GUUU---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------CC--------------------
--------------------------------------CGGGGGACA-GCGCCAGGUGGG
CUGUUCGGCUGGGGCGGCACACCCCUGA-GAAGGUAUC-AGGGGUGCCCAAAGCUCGGCU
CAGGCGGGUCAGAACUCCGCCGUA-GAGGG-CAAGGCCAA-AAGCCGGGCUGACU-GCGC
----------------------------------CCUUAAACGCGUGGGGCGCAGGCGGG
AAA-CCGGGGCCUAGCGAACGCUC-----------GUG---CCCCCUUCG----------
----------GUGGGGGCCGGGCAUGACAG-AA--AAGUUACCCCGGGA-GUAACCGGCU
CGUCGCGGGCGAGAGUUCACAUCGACCCCGCGGUUUGGUACCCAGACGUCGUCUCUUCCU
AGCUUGGCCCUGCAGCAGGGGCCAAGAGUGGGGCUGCUCGCCCAUUAAAAGGGAACGUGA
GAUGGGUUUAGACCGUCGCGAGACAGGUCGGACUCUACCUGCC-----------------
---G-GGA--------------------------------------CCGU-UGGCCGCCU
GAGGGGAUGG-UCCGCACAGUACGAGAGGAA-CUGCGGGCCGUGGCCUC-UAGUG-UACC
GGUUGUCC-GGCA-GGGCAC-U-GCCGGGCAGCCACGCCGCA-AGGGGUAACCGCUGAAG
GCA-UC--UAAGCGGGAAACCCACCCCGA-G-ACGAGGCGGCC-GC---UCCCGAUCC--
---------------------------GUUGC-UCCCGGCGACGGGG-------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------GCUUUGGGUC
GGGA--CG-AGG----GCACCCGUAGAAGACGGGGU-UGAUGGGGU-GGCGGUGUAUG-C
GC-C--------GAG-----GG--------UUUC--------CGAGGCGCG-AGCCG--G
CCACUCCCAAUA--GCCCGAGGC-----------
>Thermoplasma_volcanium
------GCUCUG--CUAAUCUGCCU-AGAGGAUG-GCUUGGU-UCGG-G---CGCCGAAG
AAGGACGUGC-CAAGCUGCGAUAUGCCUUGGGGAGGCGCAUGGAGCCAU-----AGAUC-
CAA-GGAUUUCCGAAUGGGACU-UCCU--GC----C----------------GUAA----
-------------------------GGC-A-CUCC-------------------------
------GAAA------------------------------------G-G-AG-AGGGAAC
CCGGGGAAUUGAAACAUCUUAGUACCCG--GAGGAAAAGAAAUCAA-UCGAGAUACCGUU
AGU-AA-AGGCGAUCGAAAGCGGU-A-AA-AGGCAAACCGAAUAGCCCUUCGA-------
-AAG---AAG-GGAAAGAUGUGGAG--UU--------U-GG--UCUUUCU-----C----
--U------------------AAUGCCUC-----------CU--GA-------AGCGA--
GAUG------AA-UCU-UCUG---------------------------------------
----GAAAG-AAGAG-------CCAAAGAAGGUGAUAGCCCUGUA---------AUC---
G--AAGC------UUCAGAAG-CUAUAA--------------GGGGAAGUAACCAGAGUA
CCAUGCGUCG---UUUUUCGCGUGGGAA-UGUGGGUGGCACU--AACAUCCAACCUUAAA
UA--CGU-C-CCGAAUCCGAUAGC-GAAC-UAAGUACCGUGAGGGAAAG-CUGAAA-AGU
AA-CCCGA-AAGGGU-G-GUG-AAAAGAGCCUGAAACUAGGCAGAGAUAA-CCUUG-UAG
G---GCAGUAAA-GAGGUG-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------A-UACCGUU--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------AAC------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------AACGGU-GG----
-------------AUCGC--UGUCCUAUUGUCCGUGUUGAAGAACGGGCCAGGGAGUUCU
-G-ACGGGUGGCAA-GGUUAAUCC---------UUAAA---------GGAGAA--GCCGU
AGCGAAAG-CGAUU-----------------------ACCCG-CACAGC-----------
---------------------------------------------------AAU------
------------------------------GGA-GGGGUA-GCGUG--------------
----------------------GUAAA--------------------------C-G-CGU
----------------------UUAGUCACUCGUGAGA-GACCCGAAGCC-GGUCGAUCU
ACACCUGAGUAGGUUGAAGCUCAGUGAAAG-CUGGGUGGAGGACCGA--ACCUAUUCUGA
UGUGCAAAUCGUUUGGAUGACUUGGGUGUAGGGGUUAAAGGCCAAUCUAGGCCGG-CAAU
AGCGGGUUCCCCCCGAUACUACCCGCAGGUAGACCUCGA-CGGA----------------
------------------------------------------------------------
-GAUU-CUCGACGAGGUAGAGCGACCGAUUGGU-UGGU-UAGCAGU-C-GA-AA-GGCU-
G-CGCCGACUUGUCAAACUCCGAACUUGCCG-----------------------------
------------------------------------------------------------
----------------------A-GA-U--CG-UAGAUGUCGGG-UGCUAGG-G-GGCA-
G-GGA-UAAGCUUUGC-UUCCGUGAU-GGAAAC---AACCAAGACGAG-GGUUAAGGUCC
CUAAAU--UC-UGG-UU-AA---GU-GC------ACUAAAUAGGUUUGUGGCCAAAGACA
GCGGGGAGGUAGGCUUAGAAGCAGCCA-CCCUUUAAAGAGUGCGUAACAGCUCACUCGCC
-----GAGGUCACAUGCCUAGAAGAU-GGAA-GGGGCUAA-AACCAGA----------UA
CCGAG-ACCUUCGAGCACCGA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------AAGGUGA
UC-UGGUAGGGGGGC-GUGCCAU-G-U-GGGCA-GAAGUUU--C-UUCGAGAGGA--G-G
AAUGGACCGC-AUG-GUAUCGCGGAUCC-UGGUAA-AAGUA-GCAGAG-AAGAA-CCGUG
A--G---------------AAUCGG-UUC-CGCCGA-AAGGGCUAAGGGUUCC-UUGGCA
AUGUUCGUCAGCCGAGGGUUAGUCGA--UC-CUAAGGUCAUACCU-AAC-AGGA---UAU
G-----------------------------------------------------------
-------------------------------------ACC-GA-A-AGGGA-AGCCGGUU
-AAUA-UUCCGGCACACUG----AGCG---------------------------------
--------------------------------------------------------U---
-----UU-UG---CC---------------------AUG-UGUGA-GAAGGUUCGAGGUA
GG-AGCGGUACG-GG-------UGCC-----A-ACGUAU-UUCU-G-CCUAU-----A-A
-----GC-----GG----------------AUGG-AGA-G-UC-----------------
---GUAAU-GACGAGAAGU-----UCGUGA----AAGGG-UGG-AA----G---------
------------------------------------------------------------
-CUCCC---GUUUGGGAGUC-GCUU-C-G-AUCCUUGGAUCCC-AUGAAA-A-UCAUACA
UGG----------------------------------------------------GUCAA
A-CUCAGUAUCGUACCAAGAACCGACACAGGUGCCCCUAGGU-GAGAAGCCUAAGGC-GU
UUUGGG-AUAAUGGAC-GCGAGGGAAAUCGGC-AAAAUAGCUCCGUAUCUUCGG-UAUAA
GGAGUG-CCUA-U-UC--CGC---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------GAUGGAAUA--GGUCGC
AGUGGCGAAGGGACUCCGA-----CUGUUUACCACAAACACAGAUCGCUGCUAGUCCG--
--UA-A-------------GGAUGUGU-AUAGCGGUUGA-AACCUGCCCAGUGCUG-G-U
ACCUGAAAGCCCCG-------------CACA-------------AGGGGAAGAAGGGC--
CAGUAAAC-GGCGGGGGUAACUAUGACCCUCUUAAGGUAGCGUAAUACCUAGCCGCU-UA
AUUGGCGGCUUGCAUGAA-GGUUCAACGUGG--GUCCCACUGUCCCCGCG----UUC-AG
CCCAGUGAAAUUGAUGUACUGGUGCACAAUCCAGUCUCUCCCACGUGAAAGCGAAGU-CC
CCGUGGAGC-UUUACUGCAGCCUGUAGCUGUGAUGCGAUCCUGAAUGCGUAGCGU-AGGA
AGGAGCCGUCG---AAGCUUC-GGU----------------------------UUUG---
-----------------------------------GC-CGAAGUGGAGGC-GC-CAAUGA
AACA-CUUCC-CUUUCGGGAUUGCGUCACUAACCU-C----------GUUA---------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------GAGGGACA-ACUAUUGGUGGG
CAGUUUGGGUGGGGCGCCACGCCCCUAA-CAAUGUAAC-AGGGGCCCCCAAAGGUCAGCU
CAGGAGGGUCAGAAAUCCUCCGUA-GAGUG-UAAAAGCAA-AAGCUGGCUUGACU-GUGU
----------------------------------UGCAGACAACUAGCAACGCAGAUGCG
AAA-GCAGGGUUUAGCGAACCACC-----------CAGU-UCCUCC-UUA----------
----------GUGGGGGCGGGUGAUAAGAG-AG--AAGUUACCCCAGGG-AUAACUGAGU
CGUCCUCGGCAAGAGUACACAUCGACCCGAGGGUUUGCUACUUCGAUGUCGUCUGUUCCU
AUCCUGGUGCUGCAUAAGGUGCCAAGGGUGGGGCUGUUCGCCCAUUAAAAGGGAUCCUGA
GAUGGGUUCACUACGUCGCGAGACAGUAGGGUUGCUUCUCCGU-----------------
---G-GGA--------------------------------------GUGC-UCGAUGUCU
GAGGGGAAGG-GGCCUUUAGUACGAGAGGAA-CAAGGGCUCGUGACCUC-UAGUU-UACC
GGUUGUCC-GGCA-GGGCAU-C-GCCGGGUAGCCACGUCAUACGCGGAUAAGAGCUGAAG
GCA-UC--UAAGCUCGAAGCCGCCCCCGA-A-AAUAGACAUCG-U----CAUU-------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------AGG----CCGCCUCUAAAAGAGAGGUU-UGAUAGGGC-CGGGAUGUAAG-G
AU-C--------GAG-----CU--------UUUG--------CGAGAUUUUAAGUCC--A
CGGCUACUAAAG--GCCGAAAGC-ACAAUC----
>Adineta_vaga
--------------UAAUUCUGUAC-GGUGGAUC-ACUCGGC-UCGU-U---AUUCGAUG
AAGAGCGCAG-CAAAGUGCGAGAAAGCAAUGCGAA--U---UGC--AGGACA-CAUUGAG
CAUGAAUAACUCGAACGCAUCU-AGC---AG----CCAAG-AC---------AUUA----
-----GU---C----G----A---GGCU-A-AAUU-UGC---UUCAGUCUUGUUU-----
----------------------------UUUCAAG-CUGA-AGUCAA-A-UU-AGAAUAC
UUGCUGAACUUAAGCAUAUUAAUAAGCA--AAGGAAAAGAAAUCAA-CUGAGAUUGCCUU
AGU-AA-UGGCGAAUGAACCGGCA-A-AA-GCUCAUUGCUGAAGCGUGUUAGAUUUAC--
UUCU---GAC--AUGCAUUGUAGCA--UU----------UG-GGGUAACU-----A----
---------------------CUGUAUGG-----------UG---CCU-----GUUCG--
UGU-------GAGUUC-CUUU---------------------------------------
----GAUCA-GGGCUU---UAACCAUAGAAGGUGCUAGUCCUAUA---------AUC---
A--CGAAUAGUUCU--GUGCC-GUACA---------------UUGUCUACCUUUCGAGUA
GCGUAGUUUG---AGAUUGCUACGCCAA-CGUGGGACGUAAA-CUUGUUCCAAAGCUAAA
UAUUAU--A-ACGAGACCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-UUGAAA-AGC
AC-UCUGA-AGAGAG-A-GUUAAAUAGUACGUAAAACCGUACAGAAG--A-AAACG-AAU
G---GCCG-CAU-UCAUCAG----------A------UUACUUUGGA----UUCAAUUC-
-GAUUUCUAUAUGAUGGUAAU-A-CAU----------------------------GUU--
------GAUUUGGA---ACUU---------------------------------------
-----------------------------------------CA-A---------------
--------------------------CAGUCCAUUG-------------------AUAUG
--UUCU------UGCCUAGAAUC-----GGAUGCA---UUU---UCAA--A--GUA----
------UUAACUGAACCUGGAU--C-------------------UA------UA-ACAUU
ACAG------CU------------------AGUCGA------------------AUCAG-
------UC----UA-------UU-------------------------------------
--------UU------GGUA---------------G--CGACUUUUA---------GUCG
UG---UUAAA--------------------------------AAUA--------------
---------UGACU---------------UGCAUAAAUAACAA-AUUCG-ACU----UGG
--------CGUUAUAGGU-AA----A----------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------CUGACGUGUUCUUUGAUU-----------------------------UC
AGUA---------------CUUUC-----------------GAGU---------------
-----------------------------------------------ACGG---------
-------------------CACGCCAU-------GAGCAUUGUUU---------------
--------------------------------------------------GUGU---U-A
CAUG----AGUAACUAAUAUCUAAACAAUAUUAGUUUUAU-UCAUU-GU------CA-AU
GCCUA-----AUGUUUUG--UGG---CUGUC---AA------------------------
-------------------------------------------UGAAAUCGGCAAGUCAA
CAGGAGUUUUGAAUGCCG--AGUUAUUCGACCCGUCUUGAAACACGGUCUAAGGAGUUCA
-C-UGCAUGUGCAA-GAGUUCGGCUGU------AUGA-------AAAGCCUUG--CUCGU
AAUGAAAG-UAAAGAACAUUCUUGC---AAUGUUUGAAGUGU-GAUUUCUGUCAUCUG--
--GUGCAA----------------------------AUCAU---------GACAAUG---
-----------------------------AACGCAACACU-GACAGGUU----CUAUUGC
----------------------CGCUG----------------GCAAAGAG-CU-UAGUA
----------------------AGAGUAUAUGCAAUGA-GACCCGAAAGA-UGGUGAACU
UAACGUGUGUAGAAUGAAGCCAGGGGAAAC-CCUGGUGGAAGUUCGU--AGCGGUUCUGA
CGUGCAAAUCGAUCGUCAAACAUGCGUUAAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCGUCCGAAGUUUCCCUCAGGAUAGCUGGCA-UUCA----------------
--------------------------------------------------------AUUU
UCACAGUUAUAUCCGGUAAAGCGAAUGUUUAGA-GGCAUUGG-GCG-U-AAAAU-ACGC-
U-CAACCUAUUGACAAACUUUAAAUGGGUAUGAA--------------------------
---------------GUUCA-UUUUU-CUA-CUUCAUU--GAG-----------------
----AA---UGAA-C---AGCGA-AU-G--U-----GAGUGCCA-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGCUGU-UGGAUG---CACAAAACGUCA-AGAUAAAGAGC
CAGAUG--GUCUCG-CU-CA---UC-AGAUACC-AUAAAAGGUGUUGGUCGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGUUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCGACUAGUCCUAAAAAU-GGAU-GGCGCUCG-AGCGAGC----------CU
CUUAU-ACUUGACUGUUACGA---------------------------------------
------------------------------------------------------------
-----UACAACAAGCCAUUAA---------------------------------------
--------------------------------------------CGGACAUCAUGUCGUA
AC-AAGUAGGACGGUUGAUAUGG-U-U-GCGUC-GAAGGCUA-A-CACGUGAGUG--U-G
GCUUGAGCAG-UCA-UAUGUACAGAUCU-UAGUGG-UAGUA-GCAACU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GACUGACGUGGAG-AAAGGUUCC-AUGUGA
ACAGCUAUUGGACAUGGGUCAGUCAG--UC-CUAAGAUGCGCUCG-A-A-AGAG---GGU
UCCGAAC------GAG-----GAAUAUCUAUAUUCAUAUC---------------AUAU-
-------------UUAUAUUC-----CAUCA----AA-UC-GA-A-AGGGA-AACAAGUU
-AAUA-UUCUUGUACUAAGU---GUCG------GAGAUUGUU--UGAUUUCGU-------
---------------------------GUCAAACAU-------AUG-UGG---UAAC---
-----AC-AA---AC--------------------AAGC-UCAAA-UACAUCACAAGUGG
UC-CUGGAAAGA-GU------UUUCU-----C-UUCUUU-GUUACU-UCAUC----AG-A
----CGA-----CC----------------CUGG-AAU-C-AG-----------------
---UUCAA-CUGGAGAUAG-----GGUUCA----AAUGA-AGG-UAA--AG---------
----------------------------------------------------------AG
UAGCCGUUCUUGCUACUUCC-UCGGUGCA-UCAUUUGUGAU-CCUUGAAA-A-UUUGAGC
GAGAUA---------------------------------------------UUCAAUUUC
G-CACUUAUCUGUACUCUAAACCGCAUCAGGUC-UCCAAGGU-GAAAAGCCUCUAGU-CA
AUUAGA-ACAAGGUAGCACAAGGGAAGUCGGC-AAAAUCGAUCGGCAACUUCGG-GAUAA
CGAUUG-GCUC-U-AA--GUGCUA-GGGUGUUC------GGGCUU--GAU-GAUAAA-GC
--AGU----AGAC-----UUGCU---AUUGGA-------GCUG--AG-------------
--------------------------------------------------------CUUU
CG-----------------GAUG-------------------------------------
------------------------------------------------------------
-------CA-----------GCAAUGUG------------UC------------------
-------------UGAUCGU----------------------------------------
-------------------------------------UCGGA------------------
----------------------------------------------------C-UA----
-----------GU--G-GCUU-GUCU-UG-------------------------------
------CUG----UGGAAUCG-----UU-UUGCUACG-GUA-------------------
------------------------------------------------------------
------------------UGCG--------------------------------------
--------------------GUU--CGCUU------------------------------
-GCG---G--------------------------------G-------------------
------------------------------------------UC----------------
-------GUAUUACUU----CGGACA-UCG--UUUAAUAGC--AAACUUAGA--ACUCGC
UGCGUCUAGGGGAAUCCGA-----CUGUCUAAUUAAAACAGAGCUUUGCGAUUGGCCG--
--GA-AA---------ACUUGGUGUUG-ACGCAAAGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUUAACGUGAA--------------GAAA--------------UUCAAAUAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUCUGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUGUC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGACUUCAAUGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAAUCUGUCUUCGUAAAGAGACUUGAAAAGUGUAGCGU-AGAU
GGGAGUG----------------------------------------------GCAA---
-----------------------------------------------CAC-GU-CAAUGA
AACA-CCAUUAUUUUCAUUGUUUCUUUACUUACUU-GG-------U-UAUACAGA-----
-G-----------AU-------UG--GAUU-------UUAC---AUCC-A--GUGUUUG-
-------------------------AGUG-------------------------------
-------ACAA--ACGU-------------------------------------------
--------------------CG----------AUA-------------------------
CUUGUA-----UCA----------------------------------ACG------UGA
------------------------------UCUG----CU--------------------
--------------------------------------UCAAGGAAA-GAGACAGGUGGG
GAGUUUGGCUGGGGCGGUACAUCUAUCA-AAUGUUAAC-GUAGGUGUCCAAAAGUUGACU
CAGUGCGGACAGAAACCACACAUU-GAGUA-AAAGGGCAU-AAGUCAGCUUGAUU-UAGA
----------------------------------UUUUCA--GUACGAAUACAGACGGAG
AAA-UCCGGGCCUAUCGAUCCUUU-----------UGA---UUUAACGAG----------
----------UUUUUUGCAAGAGGUGACAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGCGAAGCAGACUUCGCAAAGUGUUGGAUUGUUCACCCACCAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACA-----------------
---U-UGGA-------------------------------------UU--UUGUCAUUGA
UAUAGG-AAU-CGUACUUAGUACGAGAGGAA-CCGUACGUUCGGACAUU-UGGUUUACGU
AUUUGUUC-GAAA-GGACAA-U-GAUGCGAAGCUACCAUCCG-ACGGCUUACAACUGAAC
GCC-UC--UAAGUUGGAAUCCGAUCUAG-----ACUCAAUGAUUUUUUGGCACAU-----
---------------------------UGGUUGUCGUCAGCACAUUU-------------
-------------------------------------------------AUAUA---UGU
UCA---A-------ACUGUUG--------------------AUCAA--GU--GA--AC--
-----------AUAUGAAUGAAG------CUACCGU-------AUUG--UUGCCUCG-UC
A--UAAUCGAAAU-GAGAUUGUGAUUG----CAACGAUGC--------AUUUUUAGUC--
--------GAA----------------ACAACAC---------------------UAAUG
GCUA-----GAA----UCGAUUGUAAACGACUUUCU-UCAGUAACAGAGUAACGUACA-C
GUGA--------GAGCAAC-CG----------CCA--CAUUGCGAUCCGCUGAGUUUCUG
CUCGAUGUUAUG--CUGAUU--C-----------
>Aedes_albopictus
----------------ACCCUAGGC-AGGGGAUC-ACUCGGC-UCGU-G---GAUCGAUG
AAGACCGCAG-CUAAAUGCGCGUCAGAAUGUGAAC--U---GCA--GGAC---ACAUGAA
CACCGACACGUUGAACGCAUAU-UGC---AC----AUCGU-ACC---------UCC----
----AGU---A----C----G---AUGU-A-CACA-UUU---UUGAGUGCCUAUAUUUU-
-------------------------AUCAGUAGGC-CUCA-AAUAAU-G-UG-UGACUAC
CCCCUAAAUUUAAGCAUAUUAAUAAGGG--GAGGAAAAGAAACUAA-CAAGGAUUCCCUG
AGU-AG-CUGCGAGCGAAACGGGA-A-GA-GCUCAGCACGCAGGGGCGAUGCACUG----
GUGU---AUC-UGCCCGGUUCCGUG--UA----------CU-GGAGAGUU--CGUU----
---------------------AUCUGCGU-----------AA---CCGGUC--GCUGG--
UUC-------AAGUUCAACUA---------------------------------------
----GAAUG-UGGCUUUUACUCCCAGAGAGGGUGAUAGGCCCGUA---------GAG---
C--GGCGCA---CC--GAUGG-UAGA----------------AGAUCUUUCCAUGGAGUC
GUGUUGCUUG---AUAGUGCAGCACAAA-G-UGGGAGGUAAA-CUCCUUCUAAAGCUAAA
UAUCAC--C-ACGAGACCGAUAGC-GAAC-A-AGUACCGUGAGG-AAAG-UUGAAA-AGC
AC-UCUGA-AUAGAG-A-GUCAAAAAGUACGUGAAACUGCCUAGGGC--UCAAGCCCGUU
G---AACU-CGA-UUAUCC------------------GAGCG-GAGA--CAUUCA--CC-
-UGCGGU-----------------UGG---------------------------------
----------CCGG----------------------------------------------
------------------------------------------------------------
---------------------------CGACGG-----------------------CACG
-----------------GCCGCA-----GGGCA---CUUGU---CUCU--C--GCACU--
--AGCCAAGAGGACACUGCGAU--C-------------------CA------UU-AC---
---GAAACAGCUUUCGCGCAAGCGCAAGGUCGCCCGACAACUGCC--CCCUGGUGCUGGU
UGCUUGCC----CC-------ACA--------------------------GU--------
------AGCG------------------AC----GCU-CAGUU-CUGAA-----GGCCUG
U-----GCCG------C----------------------GAGGUGG--------------
----------GGCUUAC------------UGCACGUGGUGUUCUAGCAG-UCG----GGC
G-------CGUGAUGGAU------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------UCCCCC-----G
GA---------------CACCGGGUGG---------------------------------
-----------------------------------------------------UC----U
UCCCG----------------UAA-------------GGG-------------------G
CC--------AC-CGGAC---------------------------------------UGU
CG----------------------------------------------AUCGGCAG--UG
A------AAGAAUCGAGG--UACUUCGGGACCCGUCUUGAAACACGGACCAAGAAGUCUA
-U-CUUGCGCGCGA-GCCAAUGGUCGUC-----CUCCG-----GAGCACCAAA--GGCGC
AGAAAACA-UAACUU-----------GAGUUGUGC-GGGAUU-ACGGGCGCGGCUCU---
------------------------------------CUGCU---------CGU-------
----------------------------CCCUCCAUCCCC-GGGUGUUGUAAUCG-GCAU
-GCGGCUACCGGGACCAAGGCUUCAC---GGCCCCCGGCACCGUGCCACAA-CA-UACCG
----------------------UGAGUGUGCAGGAUGU-GACCCGAAAGA-UGGUGAACU
AUGCCUGAUCAGGUUGAAGUCAGGGGAAAC-CCUGAUGGAGGACCGA--AGCAGUUCUGA
CGUGCAAAUCGAUUGUCAGAAUUGGGCAUAGGGGCGAAAGACCAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGAG-CACG----------------
------------------------------------------------CAACGUUUCGAA
UCCUAUUCUUAUCUGGUAAAGCGAAUGAUUAGA-GGCCUUAG-GUU-C-GAAAU-GAUC-
U-UAACCUAUUCUCAAACUAUAAAUGGGUACGUACCAUAGCAUUCUUGCAUGAUGCUGUU
GCAAACGUUGGUAAACGCCG-GGCCGUCC--CCUG--UCAGGGCG---------------
---UGCC-ACGGCGU---AGAAG-AU-A--UCU---GUGUGCUU-AGUGGGC-CAAGUU-
U-UGG-UAAGCAGAAC-UGGUGCUGU-GGGAUG---AACCAAACGUAA-UGUUACGGCGC
CUAAAUAAACGACG-CA-UC---AU-AGAUACC-AUGAAAGGUGUUGAUUGCUACAGACA
GCAGGACGGUGGACAUGGAAGUUGUCA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAGCAAUUAGCCCUUAAAAU-GGAU-GGCGCUUA-AGUCGUU----------UG
CCUAU-ACAUUACCGUGGCGCACAAG----------------------------------
-------------------------------------------UGG--------------
----GGC-A----CGCCUCGA------GCGCGU---------------------------
--------------------------------------------CUGCCCUUGAGGCGCC
AC-GAGUAGGAGGGU-CUGGUGG-U-GUGCGUU-GAAGUGCC-U-GGCGUAAGCC--G-A
CAUGGAGCCG-CCA-CUAGCACAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-GAAUG
A--G---------------AUCUUG-GAU-GACUGAAGUGGAG-GAGGGUUUC-GUGUCA
ACAGCAGUUGAACACGAGUUAGCCAA--UC-CUAAGCUCUAUGGG-A-A-ACCU----GA
UAUAUAUUAA---GCAU----UUAA----CCA--AAUACAACAACGUAUACCAGCGUGUU
GAUGCAACCGAUACGAUAUAU-------AUUGAAUGA-GC-GA-A-AGGGA-AUCCGGUU
-ACAA-UUCCGGAGCCUGUUGGGUAUA------CGUU-------UGCAUUGGCGUCCC--
-AUACC----GGC-----------AACGGUAGCGCCUUUGUAAUCA-UGG---CAAC---
-----AU-GAAUCCU--------------------UUUC-UUCGA-GAAGCCAACAAGAG
AU-AUCGGAAGA-GU------UCUCU-----U-UUCUGU-UUUACA-GUCAC----AC-U
-----AG-----CC----------------AUGG-AAG-U-CU-----------------
---UUCAU-AGAGAGAUAU-----GGUUGGA---CAGGC-UGG-UAG--AG---------
------------------------------------------------------------
CAUGGUAUUAAAUUGCUGUG-UCGAUAUU-CUCUUCUUGGA-CCUUGAAA-A-UCGAAGA
CUGGGG-------------------------------------------CACGCAAACUC
C-CAACAGCUUGUACCGA-AUCCGCAGCAGGUC-UCCAAGGU-UUAGAGUCUCUAGU-C-
GAUAGA-UUAAUGUAG-GUAAGGGAAGUCGGC-AAAUUAGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-GA--AGACUG-GGAUGACUC-----GGGCUAU-ACC--C-----UC
--CCG----GGGU-----UCGCC---GC------------GGG-----------------
--------------------------------------------------------UG-C
CG-----------------GCC--------------------------------------
------------------------------------------------------------
-------CGCCU------------CG----------------------------------
-------------CGC--GG----------------------------------------
-------------------------------------GUGC-------------------
----------------------------------------------------C-------
-----------UC--G-GU---CCCC-GG-------------------------------
-------GGUC-C-----GGG-----GUUUGCCUCAACGCGGU-----------------
-------------------CCG--------------------------------------
------------------GGCCG--------------------------------UUUCG
-------------------UGUG--GUGUUCG-------------------------CGC
ACCG---C----------------------CGGCG-----GUCG----------------
------------------------------------------CCG---------------
-------GGGCCGCUG----CAGUCA-UCA--AUAAACAGU--CAAUUCAGA--ACUGGC
ACGG-CUGAGGGAAUCCGA-----CUGUCUAAUUAAAACAAAGCAUUGUGAUGGCCUC--
--AA-A-------------AGGUGUUG-ACACAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAACGUGAA--------------GAAA--------------UUCAAGCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCUCUGUCCCUAUC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGAAACACUAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCCGGCAUUGUAAGGCGAUAUAAGAGGUGCAGAAU-AGGU
GGGAGCCGGGG-----------------------------------UAAAACAUUACCU-
-------------------------------------------CCCCGGC-AC-CAAUGA
GAUA-CCACCACUCUUACUGUUGCCUUACUUACAU-GA-------U-CAGGUGGAACAAG
UG-----------CCA------AG--GUUA-------UUGC---AACC-UCCUGGCAUAA
GGUUUCUUGUUCAGCGUUCAGUCAUGUCGUCAUU-CCUGGCCACAAGGCAGAAGACCGAG
CCUGCGGUCAU-CGCGUCCGUUGCGCGGCUCCCGGGUGUGC-GUUCCGG-----------
--------------------CCGGGUGCGUUCGCGGCUGCCCCAGUAGGAUCCCGUCCGG
UUUGGGU----UCGCGU--------------------------GCGG-GCCA-----CGG
CCGCAGUUUUGCUCAACUUUCACACCGUACGCCGA---UGACAG--------UAAGACA-
-----------------------UCUGGAUACUCCAAGUCAUGGACA-GUGCCAGGUGCG
GAGUUUGACUGGGGCGGUACAUCUCCAA-AACAAUAAC-GGAGGUGUCCAAAGGUCAGCU
CAGUGUGGACAGAAACCACACGCU-GAGCA-UAAGGACAA-AAGCUGGCUUGAUC-UCGA
----------------------------------UGUUCA--GUACAUAUUGAGACAGCG
AAA-GCUAGGCCUCACGAUCCUUU-----------UGG---UUUAAAGAG----------
----------UUUUUAGCAAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCCGCCAAGCGUUCAUAGCGACGUGGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAAAAUUCACAAAGCGUAGGAUUGUUCACCCUUUCA-AGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-GUGUG-------------------------CGAACGAACACGA--ACGCUAUCUU
AACGGA-AAU-GCUGUGCAGUACGAGAGGAA-CCACAGCUUCGAACCAA-UGGCUCAAUA
CCUAGUUC-GACC-GGACUU-U-GGUAUAACGCUA-CGUUCG-UUGGAUUAUGCCUGAAC
GCC-UC--UAAGGUCGUAACCAAACCGAGC---UGAUAGUGUC-UCCUUAUAGGU-----
--------------------------------CGUCGGCGAUCAUGU----------GGC
AAAAAAC---CU----------------------------------ACAAGACC---UGC
UAG------------CGUGAU--------------------CUCAC--GU--UG--GCA-
----UCUUAUUGCAUGCACGCAGACAAAGCCCCCGCG-CGCGCACCAUACAGC-----AA
G--UAUCUAA----GAUACUGGAACGC----UGGUGGCGCUGCU---CAGCAUC-AAU--
--------AU-----------------AUGAUUU---------------------CGAUA
CCUG-----AGA----CCCCCUACAAACGAUAGGUU-UACAGGCUG-GGAGUUGCGAG-U
UGCA--------GAGAGGU-GU----------A----CAUUUCGAUCCUCAGUCGUU---
UCUGUUGUCGAC--GGGUCU--A-----------
>Anolis_carolinensis
-----------------CUCUUAGC-GGUGGAUC-ACUCGGC-UCGU-G---CGUCGAUG
AAGAACGCAG-CUAGCUGCGAGAAUUAAUGUGAAU--U---GCA--GGACA--CAUUGAU
CAUCGACACUUCGAACGCA-CU-UGC---GG----CCCCG-GGU---------UCC----
----UCC---C----G----G---GGCU-A-CGCC-UGU---CUGAGCGUCGCU------
-----------------------------CGCGAC-CUCA-GAUCAG-A-CG-UGGCGAC
CCGCUGAAUUUAAGCAUAUUAGUCAGCG--GAGGAAAAGAAACUAA-CCAGGAUUCCCUC
AGU-AA-CGGCGAGUGAACAGGGA-A-GA-GCCCAGCGCCGAAUCCCCGUCCCGCG-GC-
GGGG---CGC--GGGAAAUGUGGCG--UA----------CG-GAAGACCC--CCUC----
---------------------CCCGGCGC-----------CG---CUCCCUCGGGGGG--
CCC-------AAGUCC-UUCU---------------------------------------
----GAUCG-AGGCAC---AGCCCGCGGACGGUGUGAGGCCGGUA---------GCG---
G--CCCCCG---GC--GCGUC-GGGA----------------CCGGGUCUUCUCGGAGUC
GGGUUGCUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGU-CGAC-A-AGUACCGUAAGGGAAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUAAGAGG--U-AAACG-GGU
G---GGGC-CCGCGCAGU-------------------CCGCCCGGAG--GAUUCAACCC-
-GGCGGGCCGUCGUCGGCCGCGC-CGG----------------------------GCG--
--CG-CGG-AUCCC----CCCCCCG---------------CCCCG---------------
--GACCCA---------CCUCGG-------------------G-GAAGGGGU-UCC----
-----------------CGGG------AGGGGACCG-----------------CCGCCCG
--GGCG-GAG-CCGGCCCCCGUC-----GGGCGCA-UUUCC---GCCG-GG--GCGGU--
------GCGCCGCGACCGGCUC--C-------------------GG------GU-CG---
---G------CC------------------GGGAAGG--------------------CC-
------CC----GG-----UUCG-------------------------------------
------GGCA------------------------GG--UGGC--CCG----------CCG
------CCCU--------------------------------CGCC--------------
----------CGGCGGCGGGUGUUACAG-CCCCCGGGCCUCAGCCAUCG-CCGC--AUCC
--------CGGGGCCGAGGGA----GAAGACCGCC----------------GCCGCGCCC
UCCCCCCG--------CCGGCCCC---------------------CCGUCC---------
------------------------------CUCCCCCU----------------------
-------------CGCGGGGG-------------------------------------CG
GGCGGCGCGGG-----GGCCUCC------------------GCGC---------------
------------------------------------------------GGGGGA----CG
GGCCC-------CCCCGCUCCCGGCGC-------GACUGU-C------------------
--------------------------------------------------AACC---G-G
GGCG----GACUGCC-------------CUCAGUG--CGC-CCC---GA-----CCG-CG
UC--------GCGCCGCC--GGG---CGGGG---AG--------------------GCGC
CAC-------------------------------GCCGGGCGCCCGGGGUCCGCGG----
--------CGACGUCGGC--CCCCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CACGCGCGCGA-GUCGGAGGCUGA-------GCGC------GAAAGCCCCGCGGCGC
AAUGAAGG-UGAGGGCCGGCGCG----CGCCGGCCGAGGUGG-GAUCCCGUGUCCGCCG-
--CC------------------------------GAGCGGG---------GGG-------
-------------------------------CGCACCACC-GGCCCGUC----UCGCCCG
-C--------------------CCCG----------------UCGGGGAGG-UG-GAGCG
----------------------UGAGCGCGCGUGCUAG-GACCCGAAAGA-UGGUGAACU
AUGCCCGGGCAGGGCGAAGCCAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCUGGGUAUAGGGGCGAAAGACUAAUCGAACCGUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUCG----------------
----------------------------------------------------UCCGUCCG
UCGCAGUUUUAUCCGGUAAAGCGAAUGAUUAGA-GGUCUUGG-GGC-C-GAAAC-GAUC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCC--U--GGA-----------------
----GC---CGGG-C---GUGGA-AU-G--CG----AGCCGCCC-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUCGAUCUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCCAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCGACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGCGGGCGAUGCGG------------------------------
------------------------------------------------------------
-----GC------CGC--------------------------------------------
---------------------------------------------GGGGGCUAGGCCGCG
AC-GAGUAGGAGGGCCGCCGCGG-U-GGGCCUU-GAAGCCUA-G-GGCGCGGGCC--C-G
GGUGGAGCCG-CCG-CGGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AACUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUAAGAGAUAGGCG-A-G-CGCC----GU
UCCGA--------AGGGACGGGCG----AUGG---CCUC-----------------CGU-
--------------CGCCCUC------GGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAAUCCGGAGCGGCG---------GAGACGGGCGCC-GCGA--------
---------------------------GGCGUCC--------AGUG-CGG---UAAC---
-----GC-GA---CC--------------------GAUC-CCGGA-GAAGCCGGCGGGAG
CC-CCGGGGAGA-GU------UCUCU-----U-UUCUUC-GUGAAG-GGCAG-----G-G
-----CG-----CC----------------CUGG-AAC-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GCGCC-UUG-GAA--AG---------
------------------------------------------------------------
CGUCGCGGUUCCGGCGGCGU-CCGGUGAG-CUCUCGCCGGC-CCUUGAAA-A-UCCGGGG
GAGAGG-------------------------------------------GUGUAAAUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCAU-
GUUAGA-ACAACGUAG-GUAAGGGAAGUCGGC-AAGCCGGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-GA--GGGCUG-GGCCGGUC------GGGCUG--GGG-CGCGAA-GC
--GGG-GCUGGGCGCGCGCCGCG---GCCGGAGGAGGC-GCC------------------
--------------------------------------------------------CG-C
UCCC--------------CCCCG-------------------------------------
------------------------------------------------------------
-----UGCGC----------CCCGCG--------------UGC-----------------
-------------CGG--GG----------------------------------------
---------------------------------------GGC------------------
----------------------------------------------------G-CGGCGG
CGACUCUGGACGCGCG-CCGG-GCCCUUC-------------------------------
------CCG----UGGAUCGC-----CC-CAGCUGCG-GCGGGCGCGG------------
-------------------CCG--------------------------------------
------------------GGCC-------------------------------------C
-------------------UCCC--CCCUCG---------------------------GC
GGGG---G------------------------ACG-----GGU-----------------
-------------------------------CGGG-------CC----------------
----GGCGUCCCGCCU----CGGCCG-GCG--CCUAGCAGC--CGACUUAGA--ACUGGC
GCGGACCAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCG--
--CG-G------------CGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGGCCCUGUGAAGAGACAUGAGAGGCGUAGAAU-AAGU
GGGAGGCCCG-------------------------------------------CCCGU--
--------------------------------------------CGGGCC-GC-CGGUG-
AAUA-CCACUACUCUGAUCGUUUUUUCACUUACCC-GG-------U-GAGGCGGG----G
GG-----------GC-------GA--GCCC--------CGAG-GGGCU-CU-CGCUUCU-
-------------------------GGCU-------------------------------
-------GCAA--GCGC------------------C------------------------
--------------------CG----------GC--------------------------
GCGGGC-----CGG----------------------------------GCG------CGA
------------------------------CCCG----CU--------------------
--------------------------------------CCGGGGACA-GCGUCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCA-AAGCGUAAC-GCAGGUGUCCUAAGGCGAGCU
CAGGGAGGACAGAAACCUCCCGCG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUACGAAUACAGACCGUG
AAA-GCGGGG-CUCACGAUCCUUC-----------UGA---CUUUUUGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AG--GCGUCGUUGC
GCUAGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUU-UGGUGUAUGU
GCUUGGCU-GAGG-AGCCAA-U-GGGGCGAAGCUACCAUCUG-UGGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCCCCCUAA-----AGGGAACGAUACCGCAGCGCCG-----
---------------------------AGGAGCCUCGGUGGGCCCGG-----------AU
AGCCG----------------------------------------------------GGC
CGG------------CCCUCC--------------------CGGGG--GC--CG--GC--
-----------CCCGGUGCGGAG---AGCCGUCCGU--CUC--GGGAG-CGGA-----GC
G--CGGCCGGAAGGGGG--CCGCCUCU----CGCCCGUAGCGC-----AACGCACGUU--
--------CG-----------------CGGGGAA---------------------CCCGG
CGCU-----AAA----UCAUUCGUAGACGACCUGAU-UCUGGGUCGGGGUUUCGUACG-U
AGCA--------GAGCAGC-UC----------CCU--CGCUGCGAUCUAUUGAAAGUCAG
CCCUCGACACAAG-CUUUUGU-C-----------
>Arabidopsis_thaliana
--------AAAA--CGACUCUCGGC-AACGGAUA-UCUCGGC-UCUC-G---CAUCGAUG
AAGAACGUAG-CGAAAUGCGAUACUUGGUGUGAAU--U---GCA--GAAUCC-CGUGAAC
CAUCGAGUCUUUGAACGCAAGU-UGC---GC----CCCAA-GCC--------UUCU----
----GGC---C----G----A---GGGC-A-CGUC-UGC---CUGGGUGUCAC-------
----------------------------AAGCGAC-CCCA-GGUCAG-G-CG-GGAUUAC
CCGCUGAGUUUAAGCAUAUCAAUAAGCG--GAGGAAAAGAAACUAA-CAAGGAUUCCCUU
AGU-AA-CGGCGAGCGAACCGGGA-A-GA-GCCCAGCUUGAAAAUCGGACGUCU------
UCGG---CGU--UCGAAUUGUAGUC--UG----------GA-GAAGCGU------C----
---------------------CUCAGCGA-----------CG---GA------CCGGG--
CCU-------AAGUUC-CCUG---------------------------------------
----GAAAG-GGGCG-------CCAGAGAGGGUGAGAGCCC-GUC---------GUG---
C--CCGGAC---CC--UGUCG-CACCACG-------------AGGCGCUGUCUACGAGUC
GGGUUGUUUG---GGAAUGCAGCCCCAA-U-CGGGCGGUAAA-UUCCGUCCAAGGCUAAA
UACGGG--C-GAGAGACCGAUAGC-GAAC-A-AGUACCGCGAGGUAAAG-AUGAAA-AGG
AC-UUUGA-AAAGAG-A-GUCAAAGAGUGCUUGAAAUUGUCGGGAGG--G-AAGCG-GAU
G---GGGG-CCG-GCGAU-------------------GCGUCCUGG----------UCG-
-GAUG-------------------CGG----------------------------A----
---------ACGGA----------------------------------------------
--------------------------------------------G---------------
--------------------------CAAUCCG----------------------GUCCG
-----------------CCGAUC-----GAU-------------UCGG--G--GCGU---
------------GGACCGACGC--G-------------------GA------UU-AC---
---G------GU------------------GGCG-----------------------GCC
U--AAGCC----CG-------GG-------------------------------------
--------CUU--------------UUGA-------------------------------
------UACG--------------------------------CUUG--------------
------U---GG--------------------------------AGACG-UCG---CUGC
--------CGUGAUC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GUGGUC------
-------------------UGCAGCAC-------GCGCCU--------------------
---------------------------------------------------AAC---G-G
CGUG------C-----------------CUCGG----CAU------------------CA
GC--------GUGCUCCG------------------------------------------
---------------------------------------------GGCGUCGGCCU----
------------GUGGGC--UCCCAUUCGACCCGUCUUGAAACACGGACCAAGGAGUCUG
-A-CAUGUGUGCGA-GUCAACGGGUG-------AGUAA-------ACCCGUAA--GGCGC
AAGGAAGC-UGAUU-----------------------GGCGG-GAUCCU-----------
------------------------------------CGC-----------GGG-------
-------------------------------UGCACCGCC-GACCGACC----UU-GAUC
----------------------UUCU-----------------GAGAAGGGUUC-GAGUG
----------------------UGAGCAUGCCUGUCGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAGCGGGGUAAAGCCAGAGGAAAC-UCUGGUGGAAGCCCGC--AGCGAUACUGA
CGUGCAAAUCGUUCGUCUGACUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGAG-CUCG----------------
----------------------------------------------------------GA
CGCGAGUUCUAUCGGGUAAAGCCAAUGAUUAGA-GGCAUUGG-GGG-C-GCAAC-G-CC-
U-CGACCUAUUCUCAAACUUUAAAUAGGUAGGAC--------------------------
---------------GUGUC-GGCUG-CU--UUGU--U--GAG-----------------
----CC---GUCA-C---ACGGA-AU-C--GA----GAGCUCCA-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGC-GGGAUG---AACCGGAAGCCG-GGUUACGGUGC
CCAACU--GC-GCG-CU-AA---CCUAGAACCC-ACAAAGGGUGUUGGUCGAUUAAGACA
GCAGGACGGUGGUCAUGGAAGUCGAAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCCGAAAAU-GGAU-GGCGCUUA-AGCGC------------GA
CCUAU-ACCCGGCCGUCGGGGCAAG-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------AGCCAGGCCUCG
AU-GAGUAGGAGGGC-GCGGCGG-U-C-GCUGC-AAAACCUA-G-GGCGCGAG------G
CGCGGAGCGG-CCG-UCGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GGCCGAAGAGGGG-AAAGGUUCC-AUGUGA
ACGGCACUUGCACAUGGGUUAGUCGA--UC-CUAAGAGUCGGGGG-A-A-ACCC----GU
CUGAU--------A-------GCG-----CU-----------------------------
--------------UAAGCGA---------A----CU-UC-GA-A-AGGGG-AUCCGGUU
-AAAA-UUCCGGAACCGGGA---CGUG------GCG--------GUU-------------
--------------------------------------------GA-CGG---CAAC---
-----GU-UA---GG--------------------GAGU-CCGGA-GACGUCGGCGGGGG
CC-UCGGGAAGA-GU------UAUCU-----U-UUCUGU-UUAACA-GCC-U-----G-C
----CCA-----CC----------------CUGG-AAA-C-GG-----------------
---CUCAG-CCGGAGGUAG-----GGUCCA----GCGGC-UGG-AAG--AG---------
------------------------------------------------------------
CACCGCACGUCGCGUGGUGU-CCGGUGCG-CCCCCGGGCGC-CCUUGAAA-A-UCCGGAG
GACCGA---------------------------------------------GUGCCGCUC
A-CGCCCGGUCGUACUCAUAACCGCAUCAGGUC-UCCAAGGU-GAACAGCCUCUGGU-C-
GAUGGA-ACAAUGUAG-GCAAGGGAAGUCGGC-AAAAUGGAUCCGUAACUUCGG-GAAAA
GGAUUG-GCUC-U-GA--GGGCUG-GGCUCGGG------GGUCCC--AGU-UCCGAA-CC
--CGU----CGGC------UGUC---AG------------CGG--AC-------------
--------------------------------------------------------UG-C
UC-------G--------AGCU--------------------------------------
------------------------------------------------------------
-------GC-----------UUCCGC--------------G-------------------
--------------GCGAGA----------------------------------------
-------------------------------------GCGGG------------------
----------------------------------------------------U-CG----
-----------CC--G-GCU--GCCG-GC-------------------------------
------CGG----GGGA-CGA-----CU-GGGAAC-------------------------
------------------------------------------------------------
------------------GGCU--------------------------------------
-------------------------CUCUC------------------------------
GGGA---G----------------------------------------------------
------------------------------------------CU----------------
-------UU-----------CCCCGG-GCG--UCGAACAGU--CAGCUCAGA--ACUGGU
ACGGACAAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUUGCGAUGGUCCC--
--UG-C-------------GGAUGCUA-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAACCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUGUC----UAC-UA
UCCAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCCGACUUUGUGAAAUGACUUGAGAGGUGUAGGAU-AAGU
GGGAGC-----------------------------------------------UUCG---
------------------------------------------------GC-GC-AAGUGA
AAUA-CCACUACUUUUAACGUUAUUUUACUUACUC-CG-------U-GAAUCGGA-----
-G-----------GCC------GG--GGUA--------CAA---CCCC-U--G-UUUUU-
-------------------------GGUC-------------------------------
-------CCAA--GGCU-------------------------------------------
--------------------CG----------CUU-------------------------
---CGG-----CG-----------------------------------GGU------CGA
------------------------------UCCG----GG--------------------
--------------------------------------CGGAGGACA-UUGUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGUUA-AAAGAUAAC-GCAGGUGUCCUAAGAUGAGCU
CAACGAGAACAGAAAUCUCGUGUG-GAACA-AAAGGGUAA-AAGCUCGUUUGAUU-CUGA
----------------------------------UUUUCA--GUACGAAUACGAACCGUG
AAA-GCGUGGCCUAUCGAUCCUUU-----------AGA----CUUCGGAA----------
----------UUUGAAGCUAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGCGUUCAUAGCGACGUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGUGUUGGAUUGUUCACCCACCAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG---------------------------------------C---CCGCGUCGC
GAUAGU-AAU-UCAACCUAGUACGAGAGGAA-CCGUUGAUUCGCACAAU-UGGUCAUCGC
GCUUGGUU-GAAA-AGCCAG-U-GGCGCGAAGCUACCGUGCG-CUGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCGGGCUAG-----AAGCGACGCA-UGCGCCCGCCG-----
---------------------------CCCGAUU---GCCGACCCUC----------AGU
A---------------------------------------------------------GG
AGC-----UU-A------------------------------------GG--CU--CCA-
--------AAGGCACGUGUCGUU----GGCUAAGUC------CGUU---CGGC-----GG
A--ACGG---------UCGU-UCGGAC----CGCCU-UGA--------AUUAUA-AUU--
--------AC-----------------CACCGAG---------------------CGGCG
GGUA-----GAA----UCCUUUGCAGACGACUUAAA-UACGCGACGGGGUAUUGUAAG-U
GGCA--------GAGUGGC-CU----------UGC--UGCCACGAUCCACUGAGAUUCAG
CCCUUUGUCGCUA-AGAUUCG-A-----------
>Caenorhabditis_briggsae
--------------CUAGCUUCAGC-GAUGGAUC-GGUUGCA-UCGA-G---UAUCGAUG
AAGAACGCAG-CUUGCUGCGUUACUUACCACGAAU--U---GCA--GACG---CUUAGAG
UGGUGAAAUUUCGAACGC-AN--AGC---AC----CGACU-GG---------GUCU----
-----CC---A----G----U---CGGU-A-CGUC-UGG---UUCAGGGUUGUU------
-----------------------------AUCAAC-CUGA-ACUCAG-U-CG-UGAUUAC
CCGCUGAACUUAAGCAUAUCAUUUAGCG--GAGGAAAAGAAACUAA-AAAGGAUUCCCUU
AGU-AA-CGGCGAGUGAAACGGGA-U-GA-GCCCAGCGCCGAAUCGAUCAGCCUA-----
UGGU---UGC-UUCGAAAUGUGGCG--UA----------UA-GGUGUAGU----CU----
---------------------UCCAGCAG-----------UG---UC------GUGAG--
UCCG------AAGUCC-UUAC---------------------------------------
----GAUUG-AGGCCAU--AGACCAGAGAGGGUGCGAGUCCCGUC---------CUG---
G--AUUGCG---AU--GCUGUUGGUU----------------CGAUUGCUCCUUGGAGUC
GGGUUGCUUG---AAAGUGCAGCCUAAA-G-UGGGUGAUAAA-CUUCAUCUAAGGCUAAA
UAUUGA--C-UCGAUUGCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-UUGCAA-AGG
AC-UUUGA-AGAGAG-A-GUUCAAGAGAACGUGAAAUCGCUGGAGUG--G-AACCG-GAG
A---CAGU-UGA-UG----------------------UUGCUUGGAG--AC--AAGUUU-
-GGUG--------------GC---UGG---------------------------------
----------UCGC----UU----------------------------------------
------------------------------------------A-G---------------
---------------------------UUGUGA------------------------UCG
------------------UCGCC-----GGAUG---UCGUU---UCCU-AU--GC-----
-------------U-ACGCCGA--C-------------------GG------CG-UU---
---G------GU------------------CGCUCGUU----------------CUGGC-
------CC----GA-------UA-------------------------GUGU--------
------UGCC------------------------CAG-CUCGC------------AAGAG
------UCGG---UGUC---------------------UUGUUAUC--------------
----------GGUC----------------------GUUG----GUUCG-UGG---UGGC
--------UAGCGUU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------UAGUUAC---------------------------------
------------------------------------------------------------
-GC---------------------------UAGUG--UGU--------------------
----------GUGAC---------------------------------------------
------------------------------------------------GUCGGUGU----
--------GAAAGUCGAC--GACUUUCCGACCCGUCUUGAAACACGGAUUGCGGAGUGCU
-U-GUCUACUGCGA-GUCAAAGGGUG--------UUAA-------AACCUUGC--GGCGA
AAUGAAAG-UGAAGGUCAGUCUU---GAAUUGGCCGACGUGG-GAUCGGUGCUCCUCG--
------------------------------------GAGUG---------CUG-------
-------------------------------CGCACCACG-GCCCUGUG----CG-UGUC
----------------------ACUUG----------------UGACUGUG-CA-GAGGU
----------------------UGAGCAGUUGGCAAAC-GACCCGAAAGA-UGGUGAACU
AUGCCUGAGCAGGAUGAAGCCAGAGGAAAC-UCUGGUGGAAGUCCGU--AUCGGUUCUGA
CGUGCAAAUCGAUCGAUAGACUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCUUCCGAAGUUUCCCUCAGGAUAGCUGGAU-CUCC----------------
------------------------------------------------------------
-GGCAGUUAUAUUCGGUAAAGCUAAUGAUUAGA-GGCCUUGG-GGA-C-GUAAU-GUCC-
U-CAACCUAUUCUCAAACUUUCAAUGGAUAUGAA--------------------------
---------------GUUGC-AGUUU-CU--UUAG--U--GAA-----------------
----CU---GUCA-A---CGUGA-AU-G--C-----GAGGUCCA-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGCUGU-GGGAUG---AACCAAACGUGG-AGUUAAGGUGC
CUAACU--UC-UCG-CU-CA---UG-AGACCCC-AUAAAAGGUGUUGGUUGAUAUUGACA
GCAGGACGGUGGCCAUGGAAGUCGGUA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUUA-AGCGAGA----------GA
CCUAU-ACUCCGCCGUUGCGGCAUGU----------------------------------
------------------------------------------------------------
-----GC------GUUGU------------------------------------------
--------------------------------------------CUAGCGCCAGGCCGUA
AC-GAGUAGGAAGGUCGUGGCGG-U-U-GCUUU-GAAGGCUAUG-AGCGUGGGCU--C-G
GCUGGAGCUU-CCG-UCAGUGCAGAUCG-UAAUGG-UAGUA-GCAAAU--AUUC-AAGUU
C--G---------------AUCCUU-GAA-GACUGAAGUGGAG-AAGGGUUCC-ACGUGA
ACAGUAGUUGGAUGUGGGUCAGUCGA--UC-CUAAGGUACUGGCG-A-A-CGCC--UUGU
AUCAU--------CGGU----GGCGA--AAAG---CUUG----------------CUUU-
--------------UGGUCCC------CGUU----UG-UC-GA-A-AGGGA-AUAGGGUU
-AAUA-UUCCCUAACUGAGAUGCAAAG------AUUGUG-----UUC-UUCG--------
---------------------------GAGCACA--------AGCG-CGG---UAAC---
-----GC-AU---UC--------------------GAAC-UUGGU-UA-GUCGCUCAAAG
AC-CGAGCUAGA-GU------UUUCU-----U-CUCUAG-UUAAGG-AAC-G-----G-A
-----CU-----CC----------------CUGG-AAU-U-GG-----------------
---UUCAG-CCAGAGAUGG-----GGACGU----UGUUU-CCG-AAA--AG---------
------------------------------------------------------------
CACCGCGGUUUCUGUGGUGU-CUCGUGCU-CUUUGAACGGC-CCUU-AAA-A-CACCAAG
GGAGGC---------------------------------------------UAUUAAUUU
G-CACUCAAUCGUACCGAUAUCCGCAUUAGGUC-UCCAAGGU-GAACAGCCUCUAGU-C-
GAUAGA-AUAAUGUAG-GUAAGGGAAGUCGGC-AAACUAGAUCCGUAACUUCGG-GAAAA
GGAUUG-GCUC-C-AG--UGGUUG-GAACGAUU------GGCCAGUUGGU---UGAU-GC
UUGUC----CGG-------CGCU---AU-----------UCUG--UC-------------
--------------------------------------------------------UG-C
UUG------A--------UGCUC-------------------------------------
------------------------------------------------------------
--------------------UCGGGCUG----------AUG-------------------
--------------GC--GG----------------------------------------
-------------------------------------ACUA-------------------
----------------------------------------------------G-UG----
-----------AU--A-GU---GCUU-GC-------------------------------
------UUG----UGGA-CGC-----UUUCUGGU----GUG-------------------
------------------------------------------------------------
------------------UGCU--------------------------------------
--------------------AGG--ACCUC------------------------------
GGUU---C----------------------------------------------------
------------------------------------------UA----------------
-------GU---AUCC----UGAUCGCUCAU-CUAAACAAC--CGUACUGGA--ACCGGU
ACGGACUCAGGGAAUCCGA-----CUGUCUAAUUAAAACAGAGGUGACAGAUGGUCCU--
--UG-C-------------GGACGCUG-ACUGUCACUGA-UUUCUGCCCAGUGCUCUG-A
AUGUUAAAUCGUA--------------GUAA--------------UUCGAGUAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUU-UA
AUUGUUGACGCGCAUGAAUGGAUUAACGAGA--UUCCUACUGUCCCUAAC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAAAAAUAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUUUGACAUUGUGAAGAGUCAUGAGAGGUGUAGCAU-AGGU
GGGAGAC----------------------------------------------UUCG---
-----------------------------------------------GUC-GC-CGGUGA
AAUA-CCACCACUUUCAUCGACUCUUUACUUAUUC-GG-------U-UAAAAGAG-----
-A-----------AU-------UG--GCUU--------CAC---GGCC-U--U-UUUUC-
-------------G----------AAGCA-------------------------------
-------UUAA--GCGG-----------------AG------------------------
--------------------CC----------AUUU------------------------
--UAUG-----GCA----------------------------------CCG------UGA
------------------------------CUCU----CC--------------------
--------------------------------------UCGAAGACA-GUGUCAAGCGGG
GAGUUUGACUGGGGCGGUACAUCUAUCA-AAUCGUAAC-GUAGGUGUCCUAAGGCGAGCU
CAGAGAGGACGGAAACCUCUCGUA-GAGCA-AAAGGGCAA-AAGCUUGCUUGAUC-UUGA
----------------------------------CUUUCA--GUACGAGUACAGACCGCG
AAA-GCGUGGCCUAUCGAUCCUUU-----------UAA---UCCUGAUUG----------
----------UUUCAGGUAAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGCGUCCAUAGCGACGUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGCGAAGCAGAAUUCGCCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-UUG--------------------------------------AC--UUGUUAUUGC
GAAAGU-AAU-CCUGCUUAGUACGAGAGGAA-CAGCGGGUUCAAACAUU-UGGUUCAUAG
ACUUGAUC-GACA-GAUCAA-U-GGUCUGAAGCUACCAUUUG-AGAGAUUAUAACUGAAC
GCC-UC--UAAGUUAGAAUCUCGCCUUG-----UCAAGGCGAAAAUUUCUUGCUU-----
---------------------------CCCGGUGUCGGGAGGCAUCU-------------
----------CU---------------------------------------------AUC
UCG------------UGGCAA------------------------C--AC--GA--GA--
-----------GCUUAUGC----------CCUAUGU--A---UGGCCU-UGGC-----UU
C--GUAGUGAAC----UCUGCGAAGCU----UGCCAACGCCA-----GAUCACU-CUG--
--------GU-----------------UCAAUGU---------------------CGGGG
CGCU-----AAA----UCACUUGCAUACGACUUGGUCUCUUGGUCAAGGUGUUGUAUU-C
AGUA--------GAGCAGU-CC----------UCUUAUACUGCGAUCUGUUGAGACU-AU
CCUUUGAUUGAG--UUAGUU--G-----------
>Caenorhabditis_elegans
--------------CUAGCUUCAGC-GAUGGAUC-GGUUGCA-UCGA-G---UAUCGAUG
AAGAACGCAG-CUUGCUGCGUUACUUACCACGAAU--U---GCA--GACG---CUUAGAG
UGGUGAAAUUUCGAACGC-AU--AGC---AC----CAACU-GG---------GCCU----
-----CC---A----G----U---UGGU-A-CGUC-UGG---UUCAGGGUUGUU------
-----------------------------CUCAAC-CUGA-ACUCAG-U-CG-UGAUUAC
CCGCUGAACUUAAGCAUAUCAUUUAGCG--GAGGAAAAGAAACUAA-AAAGGAUUCCCUU
AGU-AA-CGGCGAGUGAAACGGGA-A-GA-GCCCAGCGCCGAAUCGAUCAGUCUU-----
UGGC---UGC-UUCGAAAUGUGGCG--UA----------UA-GGUGUAAG----UU----
---------------------UCCAGCAG-----------UG---UC------GUAUG--
UCCG------AAGUCC-UUAC---------------------------------------
----GAUUG-AGGCCAU--AAACCAGAGAGGGUGCGAGCCCCGUU---------CUG---
G--AUAGCG---GC--ACUGUUGGUU----------------CGCUUGCUCCUUGGAGUC
GGGUUGCUUG---AAAGUGCAGCCUAAA-G-UGGGUGAUAAA-CUUCAUCUAAGGCUAAA
UAUCGA--C-UCGAUUGCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-UUGCAA-AGG
AC-UUUGA-AGAGAG-A-GUUCAAGAGAACGUGAAAUCGCUGGAGUG--G-AACCG-GAG
A---CAGU-UGA-UG----------------------UUGCUUGGAG--AC--AAGCUU-
-GGUG--------------AC---UGG---------------------------------
----------UCGC----UU----------------------------------------
------------------------------------------A-G---------------
---------------------------UUGUGA------------------------UCG
------------------UUGCC-----GGGUG---UCGUU---UCCU-AU--GC-----
-------------U-ACGCCGA--C-------------------GG------CG-UU---
---G------GC------------------UGCUCGUU----------------CUAGC-
------CC----GA-------CA-------------------------GUGU--------
------UGCC------------------------CAU-CUCGC------------AAGAG
------AAGG---UGUC---------------------UUGCUGGC--------------
----------GGUA----------------------GUGG----GUUCG-UGG---CGGC
--------UAGCGUU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------UAGUUAC---------------------------------
------------------------------------------------------------
-GC---------------------------UAGUG--UGU--------------------
----------GUGAC---------------------------------------------
------------------------------------------------GUCGGUGU----
--------GAAAGUCGAC--GACUUUCCGACCCGUCUUGAAACACGGAUUGCGGAGUGCU
-U-GUCUACUGCGA-GUCAAAGGGUG--------UUAA-------AACCUUGC--GGCGA
AAUGAAAG-UAAAGGUCAGUCUC---GAAUUGGCCGACGUGG-GAUCUGUGUUCUUCG--
------------------------------------GAGUG---------CAG-------
-------------------------------CGCACCACG-GCCCUGUG----CG-UGUC
----------------------ACUUG----------------UGACUGUG-CA-GAGGU
----------------------UGAGCAGUUGGCAAAC-GACCCGAAAGA-UGGUGAACU
AUGCCUGAGCAGGAUGAAGCCAGAGGAAAC-UCUGGUGGAAGUCCGU--AUCGGUUCUGA
CGUGCAAAUCGAUCGAUAGACUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCUUCCGAAGUUUCCCUCAGGAUAGCUGGAU-CUCA----------------
------------------------------------------------------------
-GGCAGUUAUAUUCGGUAAAGCUAAUGAUUAGA-GGCCUUGG-GGA-C-GUAAU-GUCC-
U-CAACCUAUUCUCAAACUUUCAAUGGAUAUGAA--------------------------
---------------GUUGC-AGUUU-CU--UUAG--U--GAA-----------------
----CU---GUCA-A---CGUGA-AU-G--C-----GAGGUCCA-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGCUGU-GGGAUG---AACCAAACGUGG-AGUUAAGGUGC
CUAACU--UC-UCG-CU-CA---UG-AGACCCC-AUAAAAGGUGUUGGUUGAUAUUGACA
GCAGGACGGUGGCCAUGGAAGUCGGUA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUUA-AGCGAGA----------GA
CCUAU-ACUCCGCCGUUGCGACAUGU----------------------------------
------------------------------------------------------------
-----GC------GUUGU------------------------------------------
--------------------------------------------CUAGCGCCAGGUCGUA
AC-GAGUAGGAAGGUCGUGGCGG-U-U-GCGUU-GAAGGCUAUG-AGCGUAGGCU--C-G
GCUGGAGCUU-CCG-UCAGUGCAGAUCG-UAAUGG-UAGUA-GCAAAU--AUUC-AAGUU
C--G---------------AUCCUU-GAA-GACUGAAGUGGAG-AAGGGUUCC-ACGUGA
ACAGUAGUUGGAUGUGGGUCAGUCGA--UC-CUAAGGUACUGGCG-A-A-CGCC--UUGU
AUCAU--------CGGU----GGCGA--AAAG---CUUG----------------CUUU-
--------------UAGUCCC------CGCU----UG-UC-GA-A-AGGGA-AUAGGGUU
-AAUA-UUCCCUAACUGAGAUGCAAAG------AUUGUG-----UUC-UUCG--------
---------------------------GAGCACA--------AGCG-CGG---UAAC---
-----GC-AU---UC--------------------GAAC-UUGGU-UA-GUCGCUCAAAG
AC-CGAGCUAGA-GU------UUUCU-----U-CUCUAG-UUAAGG-AAC-G-----G-A
-----CU-----CC----------------CUGG-AAU-U-GG-----------------
---UUCAG-CCAGAGAUGG-----GGACGU----UGUUU-CCG-AAA--AG---------
------------------------------------------------------------
CACCGCGGUUUCUGUGGUGU-CUCGUGCU-CUUUGAACGGC-CCUU-AAA-A-CACCAAG
GGAGGC---------------------------------------------UAUUAAUUU
G-CACUCAAUCGUACCGAUAUCCGCAUUAGGUC-UCCAAGGU-GAACAGCCUCUAGU-C-
GAUAGA-AUAAUGUAG-GUAAGGGAAGUCGGC-AAACUAGAUCCGUAACUUCGG-GAAAA
GGAUUG-GCUC-C-AG--UGGUUG-GAACGGUU------GGCCAGUUGGU---UGAU-GC
UUGUC----CGG-------CGCA---GU-----------UCUG--UC-------------
--------------------------------------------------------UG-C
UUG------A--------UACUU-------------------------------------
------------------------------------------------------------
--------------------UCGGGUUG----------AUG-------------------
--------------GC--GG----------------------------------------
-------------------------------------ACUA-------------------
----------------------------------------------------G-UG----
-----------AU--U-GU---GCUU-GC-------------------------------
------UUG----CGGA-CGC-----UUUCUGGU----GUG-------------------
------------------------------------------------------------
------------------UGCU--------------------------------------
--------------------UGG--ACCUC------------------------------
GGUU---C----------------------------------------------------
------------------------------------------UA----------------
-------GU---AUCC----UGAUCGCUCAU-CUAAACAAC--CGUACUGGA--ACCGGU
ACGGACUCAGGGAAUCCGA-----CUGUCUAAUUAAAACAGAGGUGACAGAUGGUCCU--
--UG-C-------------GGACGUUG-ACUGUCACUGA-UUUCUGCCCAGUGCUCUG-A
AUGUUAAAUCGUA--------------GUAA--------------UUCGAGUAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUU-UA
AUUGUUGACGCGCAUGAAUGGAUUAACGAGA--UUCCUACUGUCCCUAAC----UAC-UU
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAAAAAUAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUUUGACAUUGUGAAGAGUCAUGAGAGGUGUAGCAU-AGGU
GGGAGUC----------------------------------------------UUCG---
-----------------------------------------------GAC-GA-CAGUGA
AAUA-CCACCACUUUCAUCGACUCUUUACUUAUUC-GG-------U-UAAAAGAG-----
-A-----------AU-------UG--GCUU--------CAC---GGCC-U--U-UUUUC-
-------------G----------AAGCA-------------------------------
-------UUAA--GCGG-----------------AG------------------------
--------------------CC----------AUUU------------------------
--UAUG-----GCA----------------------------------CCG------UGA
------------------------------CUCU----CC--------------------
--------------------------------------UCGAAGACA-GUGUCAAGCGGG
GAGUUUGACUGGGGCGGUACAUCUAUCA-AAUCGUAAC-GUAGGUGUCCUAAGGCGAGCU
CAGAGAGGACGGAAACCUCUCGUA-GAGCA-AAAGGGCAA-AAGCUUGCUUGAUC-UUGA
----------------------------------CUUUCA--GUACGAGUACAGACCGCG
AAA-GCGUGGCCUAUCGAUCCUUU-----------UAA---UCCUGAUUG----------
----------UUUCAGGUAAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGCGUCCAUAGCGACGUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGCGAAGCAGAAUUCGCCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-UUG--------------------------------------AC--UUGUUAUUGC
GAAAGU-AAU-CCUGCUUAGUACGAGAGGAA-CAGCGGGUUCAAACAUU-UGGUUCAUAG
ACUUGAUC-GACA-GAUCAA-U-GGUCUGAAGCUACCAUUUG-AGAGAUUAUAACUGAAC
GCC-UC--UAAGUUAGAAUCUCGCCUUG-----UCAAGGCGAAAAUUUCUUGCUU-----
---------------------------CCCGGUGUCGGGAGGCAUCU-------------
----------CU---------------------------------------------AUC
UCG------------UGGCAA------------------------C--AC--GA--GA--
-----------GCUUAUGC----------CCUAUGU--A---UGGCCU-UGGC-----GU
C--GUAGUGAAU----UCUGCGACGCU----UGCCAACGCCA-----GAUCACU-CUG--
--------GU-----------------UCAAUGU---------------------CGGGG
CGCU-----AAA----UCACUUGCAUACGACUUGGUCUCUUGGUCAAGGUGUUGUAUU-C
AGUA--------GAGCAGU-CC----------UUUUAUACUGCGAUCUGUUGAGACU-AU
CCUUUGAUUGAG--UUUUUU--G-----------
>Cryptosporidium_hominis
A----ACACCUA--ACACUUUAAGU-AAUGGAUG-UCUUGGU-UCUC-A---UAACGAUG
AAGGACGCAG-CAAAGUGCGAUAAGCAAUGUGAAC--U---GCA--UAAUUC-UAUGAAC
AAUCAGAUCUCUCAACGCAAAU-GGC---AG----UAAUU-------------UUA----
----------U----A----U---UACU-A-UAUU-UAU---AUCAGUGUCUAUUGACUA
CUUCA--------UAUAAUAUAAUGUUUAAAAGAC-CUGA-UAUUAA-G-UA-AGAUUAC
CCACUGAACUUAAGCAUAUUAUUAAGUG--GAGGAAAAGAAACUAA-CUAGGAUUUCCUU
AGU-AA-CUGCGAGUGAACAGGAA-A-GA-GCUCAACAUGAAAAUCAAUAAUAAUUAUAU
UUUA---UUA--UUGACUUGUAGUA--UC----------UA-GAAGUAA------U----
---------------------GCCAGUGA-----------AU---UA------AUAAA--
AUU-------AAGUGU-UUUG---------------------------------------
----GAAUA-AACCA-------CCAUAGAGGGUGAAAGUCCCGUC---------UAU---
AUUUUAUUUU-UAA--UUCAC-AUACG---------------GUUUACUAUCAAAGAGUC
AUAUUCCUUG---GGAAUGGAGUAUAAA-A-UGGGUGGUAAU-UUUCAUCCAAAGCUAAA
UAUUGA--U-GAGAAACCGAUAGC-AAAC-A-AGUACCGUGAGGGAAAG-AUGAAA-AGA
AC-UUUGA-AAAGAG-A-GUUAAA-AGUACCUGAAAUUACUUAAAGG--G-AAGCA-AAU
A---AAAC-CUA-AC------------------------AUUUAAAA--AG---------
-G----------------------------------------------------------
---------------------U--------------------------------------
--------------------------------------------A---------------
------------------------------------------------------------
-------------------AAUU---------------CUU---UUAG--A--AUUGUUA
UA----------GUUUUAAUAU--U-----------------UAAA--------------
------------------------------UAUAAGAA----------------AUGAA-
------UGA--GGG-------AA-------------------------------------
--------UG------------------------UAU-----------------------
-A----AACA--------------------------------UUCA--AAGA--------
-----AUAAUAAUU-------------------UUUAAUA----UAUUA-UUA----UAU
--------UAUUGUU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------A-----------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------UUCUAA------------------------------------------
---------------------------------------------GAUAUUGGUAU----
-----------AAAAUAG--GUUUAUCUGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CAUGUGUGCAA-GUAUAUAAGUA-------AUUAA-------AACUUAUA--UGCAU
AAUGAAAG-UGACAAU-----------------------UGG-GAUUUUUUUUA------
------------------------------------AAAGA---------AAA-------
-------------------------------UGCACCAAU-GACCGACA----UU-AAUU
-UCA------------------UUUU--------------UUGAAUUAAAGUUU-GAGUA
----------------------UGAGCAUAAAUGUUAG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAGUAGGGUGAAGCCAGGGGAAAC-UCUGGUGGAAGCUCGC--AGCGAUACUGA
CGUGCAAAUCGUUCGUCAAACUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGAG-UUUA----------------
------------------------------------------------------UUUUUA
AUUUAGUUUUGUCAGGUAGAGAUAAUGAUUAGA-GGCAUCUG-GGA-C-AUGUU-GUCC-
U-AGACCUAUUCUCAAACUUCGAAUAGGCAAGUA--------------------------
---------------CUAAU-AAUUA-CU--UAAU--G--AAU-----------------
----UA---UUAG-A----AUUA-AU-A--U-----UAACUCUU-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGA-GGGAUG---CUCCUAACGUUU-AGUUAAGGUGC
CUAAAU--GU-AUG-CU-CA---UC-AGAUACC-AUAAAAGGUGUUGGUUCAUUUAAACA
GCAGGACGGUGGUCAUGGAAGUCGAAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUGAACCAGCCCUGAAAAU-GGAU-GGCGCUGA-AGCAUAU----------UA
CCGAU-ACUAAACCAUUAUUUUUAA-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------UUAUAUAAAAUA
AU-GUGUAGGAGGGC-GUAAAAG-U-U-GUUUU-GAAGUAUA-A-GAUGUAAAUC--U-A
UAUGGAACGG-CUU-UUAGUGCGGAUCU-UGGUGG-UAGUA-GCAAUU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GACUGACGUGGAG-CAGGGUUCC-AUGAGA
ACAGUAUUUGGACAUGGGUUAGUCGG--UC-CUAAGUGAGAGGUU-A-A-CACC----AA
UAAAA--------UA------AAU----UAUU---UUU----------------------
--------------UAUAUUU------AUAC----UC-AC-AA-A-AGGGA-AUCAGGUU
-GAUA-UUCCUGAACCAGAA---UAUG------GAU--A-----UUU-------------
-------------------------------------------AUA-UGG---UAAC---
-----AU-AA---AA--------------------GAAC-UCUAA-AACACAAGUAUAAA
UC-CCGAAUAGC-GU------UAUCU-----UUUGCUAU-UUAACA-AUC-U-----A-U
-----UA-----CC----------------AUGG-AAU-U-AG-----------------
---UUCAG-CUAGAGAAAU-----GGUUAU----AUGAU-UGG-AAU--AG---------
------------------------------------------------------------
-AAUUCUCUUUGUGGAAUUU-UCGGUGCA-UUUAUAAUUGU-CCUUGAAA-A-UUAGAGG
GAUAGA---------------------------------------------UUUAUUUUC
A-UAUCUGGCCGUACCGAUAACCGCAUCAGGUC-UCCAAGGU-UAACAGCCUCUGGU-C-
AAUAGA-UUAAUGUAG-AUAAGGGAAGUCGGC-AAAAUAGAUCCGUAACUUCGGGGAAAA
GGAUUG-GCUC-U-AA--GGGUUG-AGUAUAUA------GACC----CAU---------C
--AAU----UAU-------UAUA---UUAAG---------CUG-----------------
--------------------------------------------------------UU-U
UUUUGACUU---------UAUA--------------------------------------
------------------------------------------------------------
-------AUCUUU-------AUUGGA----------------------------------
--------------UU--AU----------------------------UUUGAAU-----
-------------------------------------UUAA-------------------
----------------------------------------------------A-------
-----------AC--G-GCAA-AAUA----------------------------------
-------UA---------UAA-----UU--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
AAUG---G--------------------------------AU------------------
------------------------------------------UC----------------
-------AU-----------CUAUAU-ACA--UUGAACAAC--UAACUUAGA--ACUGGA
GCGGACAAGGGGAAUCCGA-----CUGUUUAAUUAAAACAUAGCAUUGCGAUGGCCAG--
--AA-A------------AUGGUGUUG-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAACAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUAUC----UAC-UA
UCUAGCGAACCC-ACAGCCAAGGGAACGGGCUUGGAAUAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUUUGACUUUGUGAAAUGGCUUAGAAGGUGUAGCAU-AAGU
GGGAGC-----------------------------------------------UACG---
------------------------------------------------GC-GA-UCUUGA
AAUA-CCACUACUUUUAAUGUCAUUUUACUUAUUC-CG-------U-UAUAUUGA-----
----------------------GC--CUCA--------UUG-----CU------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------------GA
------------------------------UCUU----CG--------------------
--------------------------------------CGGAAGACA-UAGUCAGAUGGG
GAGUUUGGCUGGGGCGGCACAUCUGUUA-AAAGGUAAC-GCAGGUGUCCUAAGGUAAGCU
CAAUGAGAACAGAAAUCUCAUGUA-GACCA-AAAGGGGAA-AAGCUUACUUGAUU-UUGA
UUUUCAGUACGAAUACAAACUGUGAAAGCAUGGCUUUUCA--GUACGAAUACAAACUGUG
AAA-GCAUGGCCUAUCGAUCCUUU-----------AGA---UCUGUGAAA----------
----------AUUACAGCUAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGCGUUCAUAGCGACGUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGGGAUGCAGAAGUCCCAAAGUGUCGGAUUGUUCACCCGCUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUGA-------------------------------------AU--AUGAUAUUGC
GACAGU-AAU-CUAACUUAGUACGAGAGGAA-CAGUUAGGUCACAUAAU-UGGUUAAUAC
AGCUAGUU-GAAA-AGCUAG-U-GCUGUGAAGCUACCAUGUG-UUGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCAUACUGAAU---AUGCAAUGUU-AUUCACCAAUU-----
---------------------------UUAAUGUUACAUGUAAACAA-----------AU
---------------------------------------------------------AGG
UUA-------------------------------------UUUUUU--AA--CC--CU--
----------ACUUCAUACUA----------------------------AGGU-----AU
C--AACGC----------UUAUUACGU----UAUACUAAA--------AAAAUA-AUU--
--------UC-----------------AAAUAUU---------------------AAAAU
UGAU-----ACA----UCCUCUGUAUACGACUUUGA---UGCAUCCAGGUAUUGUAAG-U
ACGA--------GAGUAAG-CU----------UUG--UCUUACGAUCUACUGAGAUUCAU
CCUGUGUUCUAA--AGUGUGUAU-----------
>Cyanidioschyzon_merolae
------AAUCUA--CAGCUCCUGGC-GGUGGAUA-UCUAGGC-UCUC-G---CAGCGAUG
AAGAACGCAG-CAAAGCGCGAUAGUUGGUGCGAUU--U---GCA--GGUUU--CGUGAAU
CAUCGAGUCUUUGAACGCAAGU-GGC---GC----UCGCG-GG---------UUCG----
-----CU---C----G----C---GAGC-A-UGCC-UGU---UUGAGUGUCAGCAACCUU
GCUCCU-----CCGCGGCGGGCGCGGGUGCGUGAC-CUCA-AAUCAG-G-CA-AGAUGAC
CCGCUGAAUUUAAGCAUAUCACUAAGCG--GAGGAGAAGAAAAUAA-CCAUGAUUCCCCU
AGU-AG-CGGCGAGCGAAGCGGGA-G-GA-GCUCACGCUGGGAACCGGGCGCCU------
CGCG---CGU--CCGGGUUGUAGCC--UU----------GC-GAGACGG------C----
---------------------GCCAGUGC-----------CG---CG------CCGGA--
CCC-------AAGUCG-CUUG---------------------------------------
----GAAGA-GCGCAU------CCGGAGAGGGUGAAAGUCCCGUC---------GGU---
GGUCCGGAGG-GCG--GUGCG-CAGCG---------------GGCCGCGCUCUACGAGUC
GGGUUGUUUG---GGAAUGCAGCCCCAA-G-UGGGUGGUAAA-CUUCACCUAAGGCUAAA
UACCGG--C-GAGAGACCGAUAGC-GAAC-A-AGUACCGUGAGGGAAAG-AUGAAA-AGC
AC-UUUGA-AAAGAG-G-GUGAAA-AGCGCUUGAAACCGCCAGGAGG--G-AAGCG-AAG
G---GAGU-CGA-UG----------------------CCGCGCCGGGGCCG-----CGC-
-GCCG------------CAGC---UGC-------------AA-------------G----
---------ACGCC----------------------------------------------
--------------------------------------------A---------------
--------------------------UCCGGCGCCG------CCAGG------CAACUGG
------------CAGCAGCGGGC-----GCG-------CGC---CCGG--CCUGCGG---
-------------G-UCCGCGU--C-------------------GG------CU-CG---
---C------GG------------------CGCAGGA-----------------GCGGC-
-----UGC----UG-------GCA------------------------AGGU--------
------AGCC------------------------GGC-CCGG--UCG---------CCGG
GU----CUGG---CGCU---------------------AUAGGCCA--------------
----------GC------------------------GG------AGCCGGCUG----UGC
G-------GCGGGCC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GGGG--------
---------------------CGACGC---------------------------------
------------------------------------------------------------
CUCG-----------GC---------AA---------CGG-------G------------
----------GCGC----------------------------------------------
---------------------------------------------GACGCGGGCGC----
-------------CAUGG--CUCUCUCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-C-CGCGCAAGCGA-GUAUUCGGGC--------GGCAA--------CCCCGAG--UGCGC
AACGAAAG-UGGAGGGCGCGCCC---AGCGCGCCCGAGCUGG-GAUCGGCGGCGGAG---
------------------------------------CGCCG---------CCG-------
-------------------------------UGCACCAGC-GGCCGGCC----AU-GAAC
----------------------UUGCA----------------GUGAACGG-CCCGCGCG
----------------------GGAGCCUGCGCGGUGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAGUAGGGCGAAGCCAGAGGAAACUUCUGGUGGAGGCUCGU--AGCGAUUCUGA
CGUGCAAAUCGAUCGUCGAACUUGGGUAUAGGGGCGAAAGACUCAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCCGGAG-CAGG----------------
----------------------------------------------------------CG
GUCCAGUUUUACCGGGUAAAGCGAAUGACUCGA-GGCCUCGG-GGG-A-GCGCA-UCCC-
U-CGACCUAGUCUCAAACUCUAAAUCGGUAAGGA--------------------------
---------------GCGCG-CGCUG-CU--UUGG--U--GAG-----------------
----CG---CGCG-C---GGACA-AU-G--GA----CUGCUCCG-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGC-GGGAUG---CUCCGAAAGCGG-CGUUAAGGUGC
CGAGUG--GC-ACG-CU-CA---UGCAGACCCC-ACAAAAGGUGUUGAUGCAUUUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGCA-CCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUGCCUCAGCCCUGAAAAU-GGAU-GGCGCUCC-AGCGUGC----------AA
CCGAC-ACGCCGCCACCGGCGCGAG-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------CGGU-UGCGCCG
GU-GUGUAGGAGGGC-GUGGGGC-C-C-GUGCC-GAAGCGCC-G-GGCGCGAGCC--U-G
CGUGGAACGG-GCC-CCAGUGCGGAUCU-UGGUGG-GAGUA-GCAAAU--AUUC-AAGUG
C--G---------------AUCCUU-GAA-GGCCGAAGGGGAG-AAGGGUUCC-AUGUGA
ACCGCGAUGGGACAUGGGUGAGUCGG--UC-CUAAGGGGCAGGCC-A-A-CGCC----GA
UGCGA--------GUG-----GCG-----CG-----------------------------
--------------UGAGCGC-------CGC----AC-CC-GA-A-AGGGA-AUCGGGUU
-AACA-UUCCCGAACCGGGC---GACG------GAG--------GUA-------------
--------------------------------------------CG-CGG---CGAC---
-----GC-CC---AG--------------------GAGC-CUGGG-GACGCCGGCGCGAG
UC-CCGGCGAGC-GU------UGUCU-----G-UGCUUG-UUGACU-GCC-U-----G-A
-----CG-----CC----------------CUGG-AAG-C-AG-----------------
---CUGAC-CUGGAGAUAG-----GGCCGA----CUGGC-AGG-CAG--AG---------
------------------------------------------------------------
-CCCUGCAAGUGCGCGGGGU-CCGGUGCG-CUCGCGACGGC-CCGUGAAA-A-CCCAGGG
GACGGA---------------------------------------------UUUCCUCUC
G-UGCCCGGCCGUACCCAUAACCGCAUCCGGUC-UCCAAGGU-GAGCAGCCUCUGGC-C-
CAUAGA-ACAAUGUAG-AUAAGGGAAGUCGGC-AAAAUGGAUCCGUAACCUCGG-GAAAA
GGAUUG-GCUC-U-AA--GGGUUG-GGCCGGGG------GCGCCCGGCGC--------GC
--GGC----CGCC------UGCG---GC--G--------CCUG-----------------
--------------------------------------------------------CG-C
CU----------------AGC---------------------------------------
------------------------------------------------------------
-------GA-----------GCGAUC--------------GC------------------
-------------GGG--GC----------------------------------------
-------------------------------------GCGG-------------------
----------------------------------------------------G-CG----
-----------CU--G-CG---GGUGUGC-------------------------------
------GCG---------CGG-----CG--GG----------------------------
------------------------------------------------------------
------------------AGCG--------------------------------------
----------------------G--GCGCG------------------------------
AGCC---C----------------------------------------------------
------------------------------------------GC----------------
-------GUG----------CCGCCG-GCG--GCGAACAAC--CGACUUAGA--ACUGGU
ACGGACAAGGGGAAUCCGA-----CUGUUUAAUUAAAACAUAGCAUUGCGAUGGUCGG--
--AA-A-------------CGAUGCUG-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAACCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUCAACGAGA--UUCCCACUGUCCCUAUC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCCGACUCUGUGAAACGAGUUAGGAGGUGUAGCAU-AAGU
GGGAGCCG---------------------------------------------CUCG---
----------------------------------------------CGGC-GA-UCCUGA
AAUA-CCACUACUCCUAGUCUUGUUUUACUUACUC-CA-------U-GAGGCAGA-----
-G-----------AC-------GG--GCGA--------AAG---CCCU-G--C--UUCA-
-------------------------AAAG-------------------------------
-------CCAC--GCCG-------------------------------------------
--------------------------------GCG-------------------------
--CCGC------------------------------------------CGG------CCA
------------------------------UCUG----CG--------------------
--------------------------------------UGGAGGACA-AGGUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGCUA-AACGAUAAC-GCAGAUGUCCUAAGGUGAGCU
CAAUGAGAACGGAAAUCUCAUGUG-GAACA-AAAGGGUAA-AAGCUCACUUGAUU-UGGA
----------------------------------UUUUCA--GUACGAAUACAAACUGUG
AAA-GCAUGGCCUAUCGAUCCUUU-----------GGA---CGUUCGAAG----------
----------UUUGAAGCCAGAGGUGUCAGAAA--AAGUUACCACAGGGAAUAACUGGCU
UGUGGCAGCCAAGCGUUCAUAGCGACGUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGUGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------CG--UCGUUGUCGC
GAUAGU-AAU-CCAGCUUAGUACGAGAGGAA-CCGCUGGUUCAGAUACU-UGGCUC-AGC
ACUUGGCU-GAAC-AGCCAG-U-GGUGCGACGCUACCAUCUG-UCGGAUUAUGGCUGAAC
GCC-UC--UAAGCCAGAAUCCGUGCUAG-----AAGCGACGAU-ACCUUUCUCGC-----
---------------------------CCGGACCGCUUCGAGCCGGU-----------CU
A--------------------------------------------------------GGG
CGG------------CGCGC----------------------------GC--CG--CC--
---------GCCCCAGGGCCAUA-------GAGCAC-------GGCGUCGGGU---G-CU
G--CGCGUCGAAGCGCGCGCGGCGCCC----CGCCG-CAG--------AGCGCC-AUU--
--------GC-----------------ACGGCAC---------------------GGGCG
GGAC-----AAA----UCGCCUGUAGACGACUUGAA-UG-GGAACGCAGGGAUGUACG-C
AUCU--------GAGUAGC-CU----------UGC--UGCUACGAAAUGCUGAGUCUUAG
CUGCUGUUCCGG--GAUUUGUGA-----------
>Danio_rerio
--------------CAACUCUUAGC-GGUGGAUC-ACUCGGC-UCGU-G---CGUCGAUG
AAGAACGCAG-CUAGCUGCGAGAACUAAUGUGAAU--U---GCA--GGACA--CAUCGAU
CAUCGACACUUCGAACGCACUU-UGC---GG----CCCCG-GGU---------UCC----
----UCC---C----G----G---GGCC-A-CGCC-UGU---CUGAGCGUCGCUU-----
--------------------------UCUUACGAC-CUCA-GAUCAG-A-CG-AGACAAC
CCGCUGAAUUUAAGCAUAUUACUAAGCG--GAGGAAAAGAAACUAA-CCAGGAUUCCCUC
AGU-AG-CGGCGAGCGAAGAGGGA-A-GA-GCCCAGCGCCGAAUCCCCGCCCCGUG-CCA
GGGG---CGA--GGGAAAUGUGGCG--UA----------CG-GAAGAUCGCUCUCU----
---------------------CUCGGCGC-----------GG---GCC-----GGGGG--
UCU-------AAGUCC-UUCU---------------------------------------
----GAUGG-AGGCUU---AGCCCGUGGACGGUGUGAGGCCGGUA---------ACG---
G--CCCCCG---CC--CCGCC-GGGG----------------UACGGUCUUCCCGGAGUC
GGGUUGUUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGU-CGAC-A-AGUACCGUGAGGGAAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAACAGGGCGUGAAACCGUUGAGAGG--U-AAACG-GGU
G---GGGU-CCGCACGGU-------------------CCGCCCGGAG--GAUUCAACCC-
-GGCGGGGCUGGUCGGCCCGU-C-CGGU---------------------------GCG--
---CUCGG-AUCCC----CCC---------------------------------------
----CCUC-----------UCGG-------------------G-GGAG------------
----------------------------GGGGACCG-----------------GCGCCCG
--GACG-GAGCUCGGCCGCCGCC-----GGGCGCA-CUUCC---UCCGUCG--GCGGU--
------GCGCCGCGACCGGCUC--C-------------------GG------UU-CG---
---G------CU------------------UGGAAGG--------------------GU-
---UCGGG----GG-------CGA------------------------AGGU--------
------GGCU------------------------CGC-GGCU--CCG----------GCC
U-----CGAG-----CU-------------------UUACAGCGCC--------------
----------CCCC---------------C------GCCCCGA-CUUCG-CCGC--UUGC
UACC----CGGGGCCGCGGGC----AGUGUCC-------------------UCCGCGCCU
UCUCU----------------------------------------CCGGCC---------
------------------------------CCUCUCUC----------------------
----------------GGGGG--------------------------------------G
GGC-----------------UCG-------------------------------------
------------------------------------------------GAGGGA----CG
GGGCC-------CCUCGCUCCCGGCGC-------GUGCGU-C------------------
--------------------------------------------------GACC---G-G
AACG----GACUGUC-------------CUCAGUC--CGUUUCC---GA-----CCG-CG
CC--------GUGCCGCCCAGGG---CGGGGACAGG--------CCC---------ACGU
CCA-------------------------------AAAGGGCGCCCGAGGUCCGCGG----
--------UGAUGCCGGC--CACCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CGCGCGCGCGA-GUCAGAGGGUGC-------CCUC------GAGCCCCCAC-GGCGC
AAUGAAGG-UGAAGGCCGGCGCG----CGCCGGCCCAGGUGG-GAUCCCCCCGCCCC---
-----------------------------------GGCGGG---------GGG-------
-------------------------------CGCACCACC-GGCCCGUC----UCGUCCG
-C--------------------UCUG----------------UCGGGGAGG-UG-GAGCU
----------------------AGAGCGCGUGCGAUGG-UACCCGAAAGA-UGGUGAACU
AUGCCUGGGCAGGGCGAAGCCAGAGGAAAC-UCUGGUGGAGGCCCGC--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUCG----------------
----------------------------------------------------------CC
ACGCAGUUUUAUCCGGUAAAGCGAAUGACUAGA-GGCCUUGG-GGC-C-GAAAC-GACC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCU--U--GGA-----------------
----GC---CGGG-C---GUGGA-AU-G--CG----AGACGCCC-AGUGGGC-C-UUUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUUGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGACGGCAGAAGGA------------------------------
--------------------------------------------GC--------------
----CCC------CCCCUCC-------GGGGGGGG-------------------------
---------------------------------------------AAAGGGUAAGCCUCG
AC-GAGUAGGAGGGCCGCCGCGG-U-G-GCGCG-GAAGCCUA-G-GGCGUGGGCC--C-G
GGUGGAGCCG-CCG-CGGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AGCUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUAAGGGAUGGGCG-A-A-CGCC----GU
UCGGA--------AGGGAGGGGCG----AUGG---CCUC-----------------CGU-
--------------CGCCCCC------GGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAACCCGGAGUGGCG---------GAGACGGGCGCC-GCGA--------
---------------------------GGCGCCC--------AGUG-CGG---UGAC---
-----GC-AA---AC--------------------GAAC-CCGGA-GAAGCCGGCGGGAG
CC-CCGGGAAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCAG-----G-G
-----CG-----CC----------------CUGG-AAU-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GCGCC-CUG-GAA--AG---------
------------------------------------------------------------
CGCCGCGGUUCCGGCGGCGU-CCGGUGAG-CUCUCGUCGGC-CCUUGAAA-A-UCCGGGG
GAGAAG-------------------------------------------GUGUAAGUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCGU-
GUUGGA-ACAAGGCAG-AUAAGGGAAGUCGGC-AAGUCAGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGCUG-GGCCGGUC------GGGCUG--AGG-UGCGAA-GC
--GGG-GCUGGGCCCGCGCCGCG---GCUGGGGGAG-CGGCCG--CCCCG-CGGCGC---
-CCCCU----------CUCGUUC-----CCG---UCUCCGG---AGCACG-UCGUGCG-G
CCCCUACC----------CCCCG--UCGCCCGCCUCUUG----CUCGC--------GUCC
GUCC-------------------------------GGUCG--------------------
---CCCCCGCCUUCG----GGUGGGGGA------------GGC-----------------
-------------CGG--GCGGCUCGUGGGC---UCGGGG----------UGGGU-----
--GUUGC-GGG------UAGGGGGGG--UG-UCCGCUGCGG--CG----CG-----CCGA
GGG-UCGG-----GGCCUGCGGG-GGGGGAUGC----GCUGC-----GGUGUG-CGGCGG
CGACUCUGGACGUGCG-CCGG-GCCCUUC-------------------------------
------UCG----CGGAUCUC-----CC-CAGCUACG-GCCCGCGUCG------------
--GGACC--U---------CCGUC-----------------------------UGGC---
------------------GUCU--------------------------------------
-------------------UCUC--CUCUCG---------GGGG----------------
GAGG---G-----------------------CACG-----GGCG----------------
---------------GGCGG-------CCUCC----------CC----------------
----GGCGCGGCGCCU----CGGCCG-GCG--CCUAGCAGC--UGGCUUAGA--ACUGGU
GCGGACCAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCG--
--UG-G------------CGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACC----UGC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGGCACUGUGAAGAGACAUGAGGGGUGUAGAAU-AAGU
GGGAGGC-CCUG--GGGCC----------------------------------CUCG---
-----------------------------------GGCCCAGCGGGCGCC-GC-CGGUGA
AAUA-CCACUACUCUUAUCGUUUCCUCACUUACCC-GG-------U-UGGGCAGG----G
AG-----------GC-------GA--GCCC-------CCGGC-GGGCU-CC-UGCUUCU-
-------------------------GGCG-------------------------------
-------UCAA--GCGC------------------C------------------------
-------------------UCGG---------GGCC------------CAU--------C
GCGGUCC----CGG----------------------------------GCG------CGA
------------------------------CCUG----CC--------------------
--------------------------------------CCGGGGACA-GUGGCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCA-AACGGUAAC-GCAGGUGUCCUAAGGCGAGCU
CAGGGAGGACAGAAACCUCCCGCG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUAUGAGUACGGACCGUG
AAA-GCGGGGCCUCACGAUCCUUC-----------UGG---CUUUUUGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUGU-------------------------------------CC--GUGUUGUUGC
AAUAGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUU-UGGUGCGUGU
GCUUGGCU-GAGG-AGCCAC-U-GGUGCGAAGCUACCAUCUG-UGGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCCGCCUAA-----ACGUAACGAUACCGCAGCGCCG-----
---------------------------CGGGGCUUCGAUUGGCCUGG----------GAU
AG--------------------------------------------------CC---GGC
CGG------------GGUUC----------------------------GC--CC--UC--
----------GGUCGGUGCGGAG---AGCCAGCCGU--GAC--GGGAC-CGGG-----GC
G--CGGCCGAACGA--GCGCCGCCCCU----CUUCCGGUACGC-----ACCGCAUGUU--
--------UG-----------------UGGGGAA---------------------CCCGG
UGCU-----AAA----UGACUCGUAGACGACCUGAU-UCUGGGUCAGGGUUUCGUGCG-U
GGCA--------GAGCAGC-UC----------CAU--CGCUGCGAUCCAUUGAAAGUCAG
CCCUCGAUCCAAG-UUUUGUCGG-----------
>Dictyostelium_discoideum
------------------CAUAAAC-GGUGAAUA-CCUCGAC-UCCU-A---AAUCGAUG
AAGACCGUAG-CAAACUGCGAUAAUUCACUUGAAU--U---GCA--GCCUA--CUGGGAU
AGUUGAAAUGUUGAACGCACAU-GAU---GA----CAUCG-GUCC-------UUUC----
--GGAUU---A----G----G---UGUU-A-UACU-UGG---GUGAGAGUGGUCCU----
---------------------------GAUUCCGC-CUCA-CC-UUU-G-UA-AGAUUAC
CCGCUGAACUUAAGCAUAUCAGUAAGCG--GAGGAAAAGAAACUAA-CUAGGAUUCCGUC
AGU-AA-CGGCGAGUGAAGACGGA-A-UA-GCCCAAGGUUCAAACCUGGAUCUCUU----
CGAG---GUU--AGGUGAUGUGACC--UA----------UG-GACUGAUG---GAG----
---------------------CCCGCUGU-----------UG-----------UGACU--
GCU-------AAUUCCGUUUG---------------------------------------
----GAAUU-UCGAG-------UCGUAGAAGGUGAUAACCCUGUU---------CGC---
A--GUAUCA---CA--ACAGU-UGGACUUUG-----------CCAUUAGCUCCACGAGUA
GGAAUGUCUG---AAAUUGCAUUCUGAA---UGGGUGAUAAG-AUUCAUCCAAGGCUAAA
UAUAUG-UU-AGGAGAUCGAUAGC-AUAC-A-AGUACCGUGAGGGAAAG-GUGAAA-AGA
AC-UUUGA-AAAAAG---GUUUAAAAGUAUUUGACACCGUUUAUGUG--G-AAGCG-UUU
ACUUGGAC-CCCGAU--------------UAAUGACGUCGGUUUAGCUCUA---AUUCUU
AGGUGGCC--------AAAGUAG-AGU----------------------------GUUA-
-----C----GUGC----UGAUC-------------------------------------
-----------------------------------------AA-A---------------
---------------------------AGGUAACGG-------------------ACAUU
--UGAU-----UCAUUGGUUAUCGACGAGGAAGG--UACUC---UAAA-----UCG----
----GCCAGUUACUAACGGGUG--A-------------------GA------UC-UG---
---A--------------------------UGUUU----------------------AU-
--AAAAUG----GG-------GG-------------------------AUGA--------
------GGCUU-----------------------AU--CGGC--UUG----------CUG
------GUGG------C----------------------UCGCUCU--------------
----------CAAU--A-------------------------------A-UGG---AUAU
--------UGGGUUUCAUCAA---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GAGUGCAAAAUG
GUGGC--AAUUCACUAUUAGUGGUUAUUAAUUUUGUUUGCGU------------------
----------GGCU------------------------------------UGGCCUUGUC
UACA----GGUUAUCUUCG------GA---UGGCU--UGU-AGCUUUGUUGAACGCGUGG
GCUUAAUGUUGUGAUUCU---AG-------------------------------------
--------------------------------------------UAGCGUUACCAUAUCG
-------UUAGAGUGGGU--UCAUAAAUGUCCCGUCUUGAAACACGGAUCAAGGAGGCCG
-U-UUUGUGUGCGA-GUGUAAGAGUA-------AUUAA-------AACUCUGA--CGCGU
AUUGAAAG-AAAGAAU---------------------ACUCCAAAAGAUCGUAACU----
------------------------------------ACGGU---------UACCU-----
----------------------------UCUGUAAGGAGU-GCCCGAAU----CA-UGAG
-AAC------------------UCUG--------------UUUCGAAAGGAUUU-GCGGU
----------------------UGAGCACCUAGAAUGG-GACCCGAAAGG-UUGUGAACU
AUGCCUGAGGAAGGCGAAGUCAGGGGAAAC-UCUGAUGGAGGCUUGU--CGCAAUGCUGA
CGUGCAAAUCGCUUGUCUAACUUGGGUAUAGGGGCGAAAGACUAAUCGAACAACC-UAGU
AGCUGGUUCCUUCCGAAGUUUCCCUCAGGAUAGCUGGAG-CAGU----------------
-----------------------------------------------------------A
UUCUAGUUCCAUCUUGUAAAGACAAUGAUUAGC-AGUUUCGG-GGG-C-GUAAU-GCUC-
U-CAGCUGAUUCUCAAACUCUGAACGGGUGGGUA-UC-A---------------------
---------------UUUUA-AUUCA-CU--UAAU--U--GGAUUUUAAAAUUAAAUUGC
ACAUGU---GCAA-U---GAAAA-AU-A--G-----GAGCUCUU-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGU-GGGUUG---AACCAAAUAUUG-GGAUAAGACGU
CUAAC---AU-UCA-CU-AA---U--AGAUACC-ACAAAAGGUGUUAGUUCAUUAAGACA
GCAGGACGGUGGCCAUGGAAGUCGGUA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----AAAUGGACUAGCCCUGAAAAU-GGAU-GACGCUAGCAGUGGAU----------GG
UCGAU-GCCCAAUCGUUAAAAGAAGUGAUA------------------------------
------------------------------------------------------------
----AUA------C----------------------------------------------
-------------------------------------------------------UUUUA
AC-GUGUAGGAAGGC-GUGAAGG-U-A-ACGUA-GAAGCUU--G-AAUGUGAAUU--C-G
AGUGGAGUUG-UCU-UUAGUGCAGAUCU-UGAUGG-UAGUA-GCAAAU--AUUC-AAAAG
A--AUU-------------UACUUU-GAA-GGCCGAAGUGGGG-AAGGGUUCC-AUAACA
AUGGAAUUCACUUAUGGGUGAGUCGA--UC-CUAAGGUUUGGGUU-A-A-CUCU----CU
CUAAU--------AAG-----GUUACU-AGGU---CAUUGGAU-CGAAAGUGAAGGUGGC
U------UUAACACUAGUGAC-----UUUAUA---GG-CC-GA-A-AGGGA-AGCGGGUU
-AAAA-UUCCUGCACCAUCG---AAUG------GGA--------UAU-------------
--------------------------------------------UA-GGG---UAAC---
------C-GA---UC--------------------GUAA-UCCGG-GACAUCAAUUGGCG
GU-CGAGGAAGA-GU------UAUCU-----U-UUCUUG-UUAACA-UUGUC--UUGG-G
-----GU-----CC----------------UCCG-AAU-C-AG-----------------
---GUCAA-CUGGAGACGA-----GGAUUCAUCGCACAA-UGG-AAG--AG---------
------------------------------------------------------------
CACAGUCCUUUGGAUUGGGU-CUCGCAUC-CGCUAAAUGGU-CCUUGAAA-A-CCGGAUU
AUGGUA--------------------------------------------UUUAAUCCUA
U-UUGGUGUUCGUACCAAUAACCACAUCAGGUC-UCCAAGGU-GAAUAGCCUCUGGU-CA
AAUGUA-UUAAUGUAG-AUAAGGGAAGUCGGC-AAAACCGAUCUGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--AGGCUG--GUGGAGU------GGACA---UAU---------U
--G------GAGU-----UUGCU---AUUUG--------UUUUUUAC-------------
--------------------------------------------------------UU-U
UA-----------------GGAU-------------------------------------
------------------------------------------------------------
-------GG-----------GCAACU--------------GU------------------
--------------UU--UG----------------------------------------
-------------------------------------AAGG-------------------
----------------------------------------------------U-UU----
-----------AA--G-AUG--GGUG-GU-------------------------------
-------AAUU-CU----UUC-----CA-AUGUG--------------------------
------------------------------------------------------------
------------------AGGG--------------------------------------
---------------------------CUU------------------------------
-GCU---C--------------------------------GU------------------
------------------------------------------UC----------------
--------------------UGCUUU-ACG--AUUAACAGC--UAAUUUAGA--ACUGUG
ACGAUCACCGGGAAUCCAA-----CUGUUUAAUUAAAACAAAGCAUUGCGAUAAGCUU--
--AA-A-------------AGCUUUUG-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAGA--------------UUCAACCUAGCAC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUCAAUGAGA--UUCCCACUGUCCCUAAC----UAC-UA
UACAGCGAAACC-ACUGCAAGGGGAACGGGCCUUGCAAAAACAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGAUAUUGCAUAGUGACCUAAAAGGUGUAGAAU-AGGU
GGGAGGG----------------------------------------------GCAA---
-----------------------------------------------CCC-GA-CGGUGA
AAUA-CCACCCCUUUUGGCGUUACUUUGCUAACUU-GG-------A-AUAACAGU-----
-A-----------CC-------UC--AUAA------UUCAUU-UUAUG-A--UGGUUUU-
GGU----------G-AAU------AAGCG----------G--------------------
------AUCAACCACGG------------------GUGAAA-------------------
-------------------UCUGUGC--AA--AUUG------------GGC---AACUGA
UUUGUA-----UAGCA-------------------------AAGUAGUCCC----UCUGG
U-----------------------------CCCGUA--UUAU-------------GUCGA
--------------------------------------CCAAGAACA-GUUUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUUUGUUA-AAAGAUAAC-GCAAGUGUCCAAAGGCAGGCU
CAGUGAGAACAGAAAUCUCACGUA-GAGUA-AAAGGGCAA-AAGCCUGCUUGAUU-CUGA
----------------------------------UUUUCA--GUACUAAUCGGAACUGGG
AAA-CCAGGGCCUAUCGAUCCUUU-----------AUG---UGCUUAAAU----------
----------CUUAAGCCUAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGCGCUCAUAGCGACGCUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCUU
AUCAUUGUGAAGCAGAAUUCACAAAGUGUUGGAUUGUUCACCCACUAACAAGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-UUGUC------------------------------------AA--UUGUUUGCGU
AAUAGU-AGC-AUGAUUUAGUACGAGAGGAA-CUGUCAUGCCGGAUCAC-UGGUCUGUAG
GUUUAUUU-GACA-AAAUAG-U-GACCUGCCGCUACCAUCCG-UUGGAUAAUGGCUGAAC
GCC-UC--UAAGUCAGAAUCCAUUCUAGAA---ACGCAAACCAAAUGCUUUAGAG-----
---------------------------UGUGAAUGUUGUAGGUA----------------
-------------------------------------------------ACAUU---AGG
UUG---------UUGGUGGGGGA--------------------CCA--CUUUCA--AC--
------------UUUAAACCAUA-------------------------------------
---UGAUUAA-----UCGCUGUUACAC----UGCAGUUUCC------UUCCGGUUAUU--
--------GUG---------------GUGGGUGGCUAAAUUCUAAUUUAUAUCCUCGUUC
CGCU-----CAACUCUUCGAUUGUAGACGACUAUCA--AAUGAACUAGGUGCUGUAAG-C
UUCC--------GAGUAGC-GU----------UCA---GUUACGAGGGGUUGAGGCUUUU
CCAUUA--------GUUCUU--U-----------
>Drosophila_melanogaster
---------------AACUCUAAGC-GGUGGAUC-ACUCGGC-UCAU-G---GGUCGAUG
AAGAACGCAG-CAAACUGUGCGUCAUCGUGUGAAC--U---GCA--GGAC---ACAUGAA
CAUCGACAUUUUGAACGCAUAU-CGC---AG----UCCAU-GC----------UGU----
-----GC---U----U----G---GACU-A-CAUA-UGG---UUGAGGGUUGUAU-----
-------------------------UAUAUACAAC-CUCA-ACUCAU-A-UG-GGACUAC
CCCCUGAAUUUAAGCAUAUUAAUUAGGG--GAGGAAAAGAAACUAA-CAAGGAUUUUCUU
AGU-AG-CGGCGAGCGAAAAGAAA-A-CA-GUUCAGCACUAAGUCACUUUGUCUAUA---
UGGC---AAA-UGUGAGAUGCAGUG--UA----------UG-GAGCGUCA--AUAU----
---------------------UCUAGUAU-----------GA---GAAAUU--AACGA--
UUU-------AAGUCCUUCUU---------------------------------------
----AAAUG-AGGCCAUU-UACCCAUAGAGGGUGCCAGGCCCGUA---------UAA---
---CGUUAA---UG--AUUAC-UAGA----------------UGAUGUUUCCAAAGAGUC
GUGUUGCUUG---AUAGUGCAGCACUAA-G-UGGGUGGUAAA-CUCCAUCUAAAACUAAA
UAUAAC--C-AUGAGACCGAUAGU-AAAC-A-AGUACCGUGAGGGAAAG-UUGAAA-AGA
AC-UCUGA-AUAGAG-A-GUUAAACAGUACGUGAAACUGCUUAGAGG--UUAAGCCCGAU
G---AACC-UGA-AUAUC-------------------CGUUAUGGAA--AAUUCAUCAU-
-UAAAAU-----------------UGU----------------------------A----
----------AUAU----UU----------------------------------------
-----------------------------------------AA-A---------------
---------------------------UAAUAU-----------------------UAUG
-----------------AGAAUA-----GUGUGCA-UUUUU---UCCA--U--AU-----
--------AAGGACAUUGUAAU--C-------------------UA------UU-AG---
---C------AUAUACCA----------AAUUUAUCAUAA-----------AAUAUAACU
UA-UAGUU----UA-------UU---------------------------CC--------
------AAUU------------------------AAA-UUGC--UUG----------CAU
U-----UUAA---------------------------CACAGAAUA--------------
----------AAU-----------------------GUUAUUA-AUUUG-AUA---AAGU
--------GCUGAUAGAUU-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------UAUAUG------
-----------------AUUACAGUGC----GUUAAUUUUUC------------------
----------G------------------------------------GAAUUAU---A-U
AAUGG---CAUAAUUAUCA----UUGAUUUUUGUGUUUAU-UAU---AU-----------
----------GCACUUGU------------------------------------------
---------------------------------------------AUGAUUAACAAUGCG
A------AAGAUUCAGGA--UACUUCGGGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CAUAUGUGCAA-GUUAUUGGGA--------UAUAA--------ACCUAAU--AGCGU
AAUUAACU-UGACUAAUAAU-----------------GGGAU-UAGUUUUUUAGCUAUUU
------------------------------------AUAGC---------UAAUU-----
----------------------------AACACAAUCCCG-GGGCGUUCUAUAUA-GUUA
-UGUAUAAUGUAUA--------UUUA-UAUUAUUUAUGCCUCUAACUGGAA-CG-UACCU
----------------------UGAGCAUAUAUGCUGU-GACCCGAAAGA-UGGUGAACU
AUACUUGAUCAGGUUGAAGUCAGGGGAAAC-CCUGAUGGAAGACCGA--AACAGUUCUGA
CGUGCAAAUCGAUUGUCAGAAUUGAGUAUAGGGGCGAAAGACCAAUCGAACCAUC-UAGU
AGCUGGUUCCUUCCGAAGUUUCCCUCAGGAUAGCUGGUG-CAUU----------------
-----------------------------------------------UUAAUAUUAUAUA
AAAUAAUCUUAUCUGGUAAAGCGAAUGAUUAGA-GGCCUUAG-GGU-C-GAAAC-GAUC-
U-UAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------CCUUA-ACUUU-CUUGAUAU--G--AAG-----------------
----AU---CAAG-G---UUAUG-AU-A--UA----AAUGUCCC-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGU-GGGAUG---AACCAAACGUAA-UGUUACGUGCC
CAAAUU--AA-CAA-CU-CA---UGCAGAUACC-AUGAAAGGCGUUGGUUGCUUAAAACA
GCAGGACGGUGAUCAUGGAAGUCGAAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAGCAACUAGCCCUUAAAAU-GGAU-GGCGCUUA-AGUUGUA----------UA
CCUAU-ACAUUACCGCUAAAGUAGAU----------------------------------
--------------------------------------------GA--------------
----UUU-A----UAUUACUU------GUGAUAUA-------------------------
---------------------------------------------AAUUUUGAAACUUUA
GU-GAGUAGGAAGGU-ACAAUGG-U-AUGCGUA-GAAGUGUU-U-GGCGUAAGCC--U-G
CAUGGAGCUG-CCA-UUGGUACAGAUCU-UGGUGGAUAGUA-GCAAAU--AAUC-GAAUG
A--G---------------AGCCUUGGAG-GACUGAAGUGGAG-AAGGGUUUC-GUGUGA
ACAGUGGUUGAUCACGAGUUAGUCGG--UC-CUAAGUUCAAGGCG-A-A-AGC-----GA
AAAUU--------UUCA----AGU----AAAA---CA-----------------------
-----------------UAAU-------UUU----GA-AC-GA-A-AGGGA-AUACGGUU
-CCAA-UUCCGUAACCUGUUGAGUAUC------CGUU-------UGUUAUUA--------
------------------------AAUAUGGGCCUCGUGCUCAUCC-UGG---CAAC---
-----AG-GA---AC--------------------GACC-AUAAA-GAAGCCGUCGAGAG
AU-AUCGGAAGA-GU------UUUCU-----U-UUCUGU-UUUAUA-GCCGU-----A-C
-----UA-----CC----------------AUGG-AAG-U-CU-----------------
---UUCGC-AGAGAGAUAU-----GGUAGA----UGGGC-UAG-AAG--AG---------
------------------------------------------------------------
-CAUGACAUAUACUGUUGUG-UCGAUAUU-UUCUCCUCGGA-CCUUGAAA-A-UUUAUGG
UGGGGA------------------------------------------CACGCAAACUUC
U-CAACAGGCCGUACCAAUAUCCGCAGCUGGUC-UCCAAGGU-GAAGAGUCUCUAGU-C-
GAUAGA-AUAAUGUAG-GUAAGGGAAGUCGGC-AAAUUAGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-GA--AGAUUG-AGAUAGUC------GGCCUU--GAU-UGGGAA-AC
--AAUAACAUGGU-----UUAUGU--GCUCGU-------UCUG--GG-UA----------
----------------------------------------------------AAUAGA-G
UU-----------------UCU--------------------------------------
------------------------------------------------------------
-------AGCAUUUA-------UGUU--------------AGU-----------------
-------------UAC--UU-------------------------------GUUC-----
--C----------------------------------CCGG-------------------
----------------------------------------------------A-UAG---
----UU----UAGUUA-CGU--AGCC-AA-------------------------------
------UUG----UGGAACUU-----UC-UUGCUAAA-AUUUU-----------------
-------------------UAA--------------------------------GAA---
-----------------UACUA--------------------------------------
--------------------UUU--GGGUU----------------------------AA
ACCA---A----------------------UUA-------GU------------------
------------------------------------------UC----------------
-------UUAUUAAUUAUAACGAUUA-UCA--AUUAACAAU--CAAUUCAGA--ACUGGC
ACGGACUUGGGGAAUCCGA-----CUGUCUAAUUAAAACAAAGCAUUGUGAUGGCCCU--
--AG-C-------------GGGUGUUG-ACACAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAGUAAGCGC--
GGGUCAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCUACUGUCCCUAUC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGAAUAAUUAGCGGGGAAAGAAGA-CC
CUUUUGAGC-UUGACUCUAAUCUGGCAGUGUAAGGAGACAUAAGAGGUGUAGAAU-AAGU
GGGAGAUAUUAGAC---------------------------------------CUCG---
----------------------------------------GUUUGGUAUC-GU-CAAUGA
AAUA-CCACUACUCUUAUUGUUUCCUUACUUACUU-GA-------U-UAAAUGGAACGUG
UAUCAUUUCCUAGCCAUUAUACGG--AUAU-----AUUUAUU-AUAUC-UUAUGGUAUUG
GGUUUUGAUGCAAG-CUUC---UUGAUCA----------AAGU-----------------
------AUCAC--GAGU------------------UUGUUAUAUAAUCGC-----AAAC-
-AAAUUC-------------UUUAAUAAAACGAUGC------------AUU---------
UAUGUA-----UUUU-----------------------------UGAUUUGAAAAUUUGG
UA-UA-----------------------ACUCCAA---UUAC------------------
----------------------UCAGGUAUGAUCCAAUUCAAGGACA-UUGCCAGGUAGG
GAGUUUGACUGGGGCGGUACAUCUCUCA-AAUAAUAAC-GGAGGUGUCCCAAGGCCAGCU
CAGUGCGGACAGAAACCACACAUA-GAGCA-AAAGGGCAA-AUGCUGACUUGAUC-UCGG
----------------------------------UGUUCA--GUACACACAGGGACAGCA
AAA-GCUCGGCCUAUCGAUCCUUU-----------UGG---UUUAAAGAG----------
----------UUUUUAACAAGAGGUGUCAG-AA--AAGUUACCAUAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAAAAUUCACCAAGCGUUGGAUUGUUCACCCA-UGCAAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---A-AUGACA-----------------------------------AA--ACGUUGUUGC
GACAGC-AUU-CCUGCGUAGUACGAGAGGAACCCGCAGGUACGGACCAA-UGGCAC-AAU
ACUUGUUC-GAGC-GAACAG-U-GGUAUGACGCUA-CGUCCG-UUGGAUUAUGCCUGAAC
GCC-UC--UAAGGUCGUAUCCGUGCUGGA----CUGCAAUGAUAAAUAAGGGGCA-----
---------------------------AUUUGCAUUGUAUGGCUUCU-------------
----------------------------------------------AAACCAUUUAAAGU
UUA------------UAAUUU--------------------ACUUU--AU--AA--ACG-
--------ACAAUGGAUGUGAUG------CCAAUGUA-AUU-UGUAACAUAGUAAAUUGG
GAGGAUCU------UCGAUCACCUGAUGCCGCGCUAGUUACAUAUAAAAGCAUU-AUUUA
--------AU-----------------ACAAUGA---------------------CAAAG
CCUA-----GAA----UCAAUUGUAAACGACUUUUG-UAACAGGCAAGGUGUUGUAAG-U
GGUU--------GAGCAGC-UG----------CCA--UACUGCGAUCCACUGAAGCUUAU
CCUUUGCUUGAU--GAUUCG--A-----------
>Eremothecium_gossypii
-----------A--AAACUUUCAAC-AACGGAUC-UCUUGGU-UCUC-G---CAUCGAUG
AAGAACGCAG-CGAAUUGCGAUAAGUAUUGUGAAU--U---GCA--GAUUUU-CGUGAAU
CAUCGAAUCUUUGAACGCACAU-UGC---GU----CCUCU-GG---------UAUU----
-----CC---A----G----G---GGGC-A-UGCC-UGU---UUGAGCGUCAU-------
----------------------------GUUUGAC-CUCA-AAUCAG-G-UA-GGAUUAC
CCGCUGAACUUAAGCAUAUCAAUAAGCG--GAGGAAAAGAAACCAA-CCGGGAUUGCCUU
AGU-AA-CGGCGAGUGAAGCGGCA-A-AA-GCUCAAAUUUGAAAUCUGGCGCCU------
UCGG---CGU--CCGAGUUGUAAUU--UG----------AA-GAAAGUAC-----C----
---------------------UUGGUUGC-----------UA---GU------CCCUG--
UCU-------AUGUUC-CUUG---------------------------------------
----GAACA-GGACG-------UCAUAGAGGGUGAGAAUCCCGUC---------UGG---
C--GGGGGU---GC--UAGUG-CCAUCUA-------------AGGUUCUUUCGACGAGUC
GAGUUGUUUG---GGAAUGCAGCUCUAA-G-UGGGUGGUAAA-UUCCAUCUAAAGCUAAA
UAUUGG--C-GAGAGACCGAUAGC-GAAC-A-AGUACAGUGAUGGAAAG-AUGAAA-AGA
AC-UUUGA-AAAGAG-A-GUGAAAAAGUACGUGAAAUUGUUGAAAGG--G-AAGGG-CAU
U---UGAU-CAG-ACAUG-------------------GUGUUUUGCG--G------CCC-
------------------------------------------------------------
----------UCGC----UCCUU-------------------------------------
--------------------------------------------G---------------
--------------------------UGGGUGG---------------------------
----------------------------GGUCA------CC---GCAGUUC--ACUG---
------------GG-CCAGCAU--C-------------------AG------UU-UU---
---G------GU------------------GGCAGCAG----------------AAACC-
------CU----UA-------GGA------------------------AUGU--------
------GACU------------------------UU--CUCU--UCG----------GAG
------GAAG---UGUU---------------------AUAGCCUA--------------
----------AG------------------------GUUA----UACUG-CCA-----AC
--------CGGGACU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GAGGAC------
-------------------UGCGGCUU---------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------CGGCCAAG------------------------------------------
---------------------------------------------GAUGCUGGCAU----
-------------AAUGG--UUAAAUGCCGCCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CGUCUAUGCGA-GUGUUUGGGU--------GUAAA--------ACCCGUA--CGCGU
AAUGAAAG-UGAACGU--------------------AGGUGA-GGGCCUC----------
------------------------------------UUUAG---------AGG-------
-------------------------------UGCAUCAUC-GACCGAUC----CU-GAUG
----------------------UCUU-----------------CGGAUGGAUUU-GAGUA
----------------------AGAGCAUAGCUGUUGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAAUAGGGUGAAGCCAGAGGAAAC-UCUGGUGGAGGCUCGU--AGCGGUUCUGA
CGUGCAAAUCGAUCGUCGAAUUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCUGCCGAAGUUUCCCUCAGGAUAGCAGAAG-CUCG----------------
------------------------------------------------------------
UAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGA-GGUACCGG-GGU-U-GAAAU-GACC-
U-UGACCUAUUCUCAAACUUUAAAUAUGUAAGAA--------------------------
---------------GUCCU-UGUUG-CU--UAAU--U--GAA-----------------
----CG---UGGA-C--AUAUGA-AU-G--AA----GAGCUUUU-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGC-GGGAUG---AACCGAACGUGG-AGUUAAGGUGC
CAGAAU--AC-ACG-CU-CA---UC-AGACACC-ACAAAAGGUGUUAGUUCAUCUAGACA
GCCGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCGGCC
-----GAAUGAACUAGCCCUGAAAAU-GGAU-GGCGCUCA-AGCGUGU----------UA
CCUAU-ACUCCACCGUCAGGGCAAA-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------UAUGACGCCCUG
AC-GAGUAGGCAGGC-GUGGAGG-U-CAGUGAC-GAAGCCUA-G-GCUGUAAAGC--U-G
GGUCGAACGG-CCU-CUAGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GACUGAAGUGGGG-AAAGGUUCC-ACGUCA
ACAGCAGUUGGACGUGGGUUAGUCGA--UC-CUAAGAGAUGGGGA-A-G-CUCC----GU
UUCAA--------AG------GCC-----UGA---UUU----------------------
--------------UCCAGGC-------CAC----CA-UC-GA-A-AGGGA-AUCCGGUU
-AAUA-UUCCGGAACCUGGA---UAUG------GAU--------UCU-------------
-------------------------------------------UCA-CGG---CAAC---
-----GU-AA---CU--------------------GAGU-GUGGA-GACGUCGGCGUGAG
CC-CUGGGAGGA-GU------UAUCU-----U-UUCUUC-UUAACA-GCU-U-----A-U
-----CA-----CC----------------CCGG-AAU-U-GG-----------------
---UUUAU-CCGGAGAUGG-----GGUCUU----AUGGC-UGG-AAG--AG---------
------------------------------------------------------------
-CCCAGCAUCUAUGCUGGGU-CCGGUGCG-CUUACGACGGC-CCUUGAAA-A-UCCACAG
GAAGGA---------------------------------------------AUAGUUUUC
A-UGCCAGGUCGUACUGAUAACCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUAGU-U-
GAUAGA-AUAAUGUAG-AUAAGGGAAGUCGGC-AAAAUAGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGAUCG-GGUAGUGA------GGGCCUU-GGU--CAGAC-GC
--GGC----AAG-------UGUG----CUUG---------UGG--UC-------------
--------------------------------------------------------UG-U
CC-----------------UCG--------------------------------------
------------------------------------------------------------
-------GGGGCUU--------GCUC--------------CU------------------
--------------GG--GG----------------------------------------
-------------------------------------ACGG-------------------
----------------------------------------------------A-CU----
-----------GCUUG-CGU--GCUC-UG-------------------------------
------UCG----UAGA-CGG-----CCUUGGUA--------------------------
------------------------------------------------------------
------------------GACC--------------------------------------
--------------------------AUCU------------------------------
-CUG---G----------------------------------------------------
------------------------------------------UC----------------
-------GUCG---------CUUGCU-ACA--AUUAACGAU--CAACUUAGA--ACUGGU
ACGGACAAGGGGAAUCUGA-----CUGUCUAAUUAAAACAUAGCAUUGCGAUGGUCAG--
--AA-A------------GUGAUGUUG-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAACCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUAUC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUUUGACAUUGUGAAGAGACAUAGAGGGUGUAGAAU-AAGU
GGGAGC-----------------------------------------------UUCG---
------------------------------------------------GC-GC-CAGUGA
AAUA-CCACUACCUUUAUAGUUUCUUUACUUAUUC-AA-------U-UAAGCGGA-----
-G-----------CU-------GG--AAUU--------CAU---UUUC-C--ACCUUCU-
-------------------------AGCA-------------------------------
------UUUAA--AGUC-------------------------------------------
--------------------CU----------AUAC------------------------
-----G------------------------------------------GGC------UGA
------------------------------UCCG----GG--------------------
--------------------------------------UUGAAGACA-UUGUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGUUA-AACGAUAAC-GCAGAUGUCCUAAGGGGGACU
CAUGGAGAACAGAAAUCUCCAGUA-GAACA-AAAGGGUAA-AAGUCCCCUUGAUU-UUGA
----------------------------------UUUUCA--GUGUGAAUACAAACCAUG
AAA-GUGUGGCCUAUCGAUCCUUU-----------AGU---UCCUCGGAG----------
----------UUUGAGGCUAGAGGUGCCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGUCAAGCGUUCAUAGCGACAUUGCUUUUUGAUUCUUCGAUGUCGGCUCUUCCU
AUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AA---UGUUAUCGC
AAUAGU-AAU-UGAACUUAGUACGAGAGGAA-CAGUUCAUUCGGAUAAU-UGGUUUUUGC
GGCUGUCC-GACC-GGGCAU-U-GCCGCGAAGCUACCAUCCG-CUGGAUUAUGGCUGAAC
GCC-UC--UAAGUCAGAAUCCAUGCUAGA----ACGCGAUGAU-UCUUUUUCUCG-----
---------------------------CACAUUAUAGAUGGAUACGA-----------AU
A--------------------------------------------------------AGG
UGC---------------------------------------UUUU--AG--CA--UC--
------------GCUGAACCAUA-------GCAGGC------CGGCAACUGGU-----GU
U--CAGACGGAAA-GGUC-UGGGCGCG----UGCCGGCGG--------AUUGC--AAU--
--------GU-----------------CAUACUG---------------------CGCGA
GAGU-----AAA----UCAUUUGUACACGACUUAGA-UGUACAACAGGGUAUUGUAAG-C
AGUA--------GAGUAGC-CU----------UGU--UGUUACGAUCUGCUGAGAUUAAG
CCUUCGUUGUCU--GAUUUG--U-----------
>Gallus_gallus
--------------CAACUCUUAGC-GGUGGAUC-ACUCGGC-UCGU-G---CGUCGAUG
AAGAACGCAG-CUAGCUGCGAGAAUUAAUGUGAAU--U---GCA--GGACA--CAUUGAU
CAUCGACACUUCGAACGCA-CU-UGC---GG----CCCCG-GGU---------UCC----
----UCC---C----G----G---GGCU-A-CGCC-UGC---CUGAGCGUCGCUUUCCCG
U---------------------UUCCGUUCGCGAC-CUCA-GGUCAG-A-CG-UGGCGAC
CCCUUUAAUUUAAGCAUAUUAGUCAGCG--GAGGAAAAGAAACUAC-CUAGGAUUCCCUC
AGU-AA-CGGCGAGUGAAGAGGGA-A-GA-GCCCAGCGCCGAAUCCCCGCCCCGCG-GU-
GGGG---CGC--GGGAGGUGUGGCG--UA----------CG-GAAGCCCC--CAUC----
---------------------CCCGGCGC-----------CG---CUCUCG--GGGGG--
CCC-------AAGUCC-UUCU---------------------------------------
----GAUCG-AGGCCC---AGCCCGCGGACGGUGUGAGGCCGGUA---------GCG---
GC-CCCCCG---GC--GCGCC-GGGC----------------CCGGGGCUUCUCGGAGUC
GGGUUGCUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGC-CAAC-A-AGUACCGUAAGGGAAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUAAGAGG--U-AAACG-GGU
G---GGGU-CCGCGCAGU-------------------CGGCCCGGAG--GAUUCAACCC-
-GGCGGGCCAAGGUCGGCCGG-CGCGG----------------------------GCG--
-CCGUCGG-AUCCCCGCCUCCGCCU---------------CCCC----UC-CGUCCCUC-
----CCCU--------UCGCCGG------------------GGCGGGGCGGG-CCCAGG-
---------GGGG---GCGGGCGGG-CCGGGGACCG-----------------CCGCCCG
--GCCG-GCGUCCGGCCCCCGUC-----GGGCGCA-UUUCC---UCCG-CG--GCGGU--
------GCGCCGCGACCGGCUC--C-------------------GG------GA-CG---
---G------CU------------------GGGAAGG--------------------GC-
---UGCCG----GC-------GGGC-----------------------AGGU--------
-GG---CCCG------------------------GCG-CCGC--GCG--------AGCGG
CC---GCCGG-----GU------------------GUUAUAGCCGC--------------
----------CGG-----------------------GCCCGGAUCGUCG-CCGA--AUCC
--------CGGGGCCGAGGGA----GAGGACCGCCGCCGCGCCCUCCCCCGGAGGGGGCG
GCCCCCCGGAGGGCCCCCCGCGGCCGGACCGGCGUCGGGCCGGCCGCGCCGCGCGCGCGU
CCGCGCCGCCGCCGUACGCCGCCGCUCGCUCUCUCUCCGUUCCCCGCCCCGGGUCCGUCC
CGGGGCGCGGGGGCGGGGGGGGUCGGGUGUCCGGCGCGCGGCUGGGCGCGGCGCCGCGCG
UGUGGCGCGCGCAUCCAGCCCGGCGCGGGCGAGGCCGCGGGGGGCGCCGGGGGGGAACCU
UCCCCCUUCUGUUCGGGCCGCCUCCGUUCCCGCGGGGGCGGCCCGUUCGGGGGA----CG
GGCCC-------GCCGGCCCCCGGCGC-------CGCUGUCC------------------
--------------------------------------------------GACC---G-G
GGCG----GACUGCG-------------CUCAGUG--CGC-CCC---GA-----CCG-CG
CG--------GCGCCGCC--GGG---CCGGGCUCGG--------GCC---------ACGC
C-----------------------------------AGGGCGCCCGGGGUCCGCGG----
--------CGACGUCGGC--UACCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-G-CACGCGCGCGA-GUCGGCGGCUCG-------CGCG------AAAGCCCGC--GGCGC
AAUGAAGG-UGAGGGCCGGCGCG----CGCCGGCUGAGGUGG-GAUCCCGGGGCGGCAG-
--GC--------------------------CGGAAGGCCCC---------GGG-------
-------------------------------CGCACCACC-GGCCCGUC----UCGCCCG
-C--------------------CUCG----------------CCGGGGAGG-UG-GAGCA
----------------------UGAGCGCGCGUGCUAG-GACCCGAAAGA-UGGUGAACU
AUGCCUGGGCAGGGCGAAGCCAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCCGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUCG----------------
----------------------------------------------------GGGCGGCG
GUGCAGUUUUACCCGGUAAAGCGAAUGAUUAGA-GGUCUUGG-GGC-C-GAAAC-GAUC-
U-CAACCUAUUCUCAAACUUUCAAUGGGUAAGAC--------------------------
---------------GCCCG-GCUCG-CU--GGCG--U--GGA-----------------
----GC---CGGGCC---GUGGA-AU-G--C-----GAGCGCUC-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGAGCCC-AGAAAAGGUGUUGGUUGAUCUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-CCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCA----------GG
CCCAU-ACCCGGCCGUCGCCGGCGGUGCGG------------------------------
------------------------------------------------------------
----AGC------CGC--------------------------------------------
---------------------------------------------GGGGGCUACGCCGCG
AC-GAGUAGGAGGGCCGCUGCGG-U-GCGCCUG-GAAGCCUG-G-GGCGCGGGCC--C-G
GGUGGAGCCG-CCG-CAGGUGCAGAUCU-UGGUGG-UAGUA-GCAACU--AUUC-AAACG
A--G---------------AGCUUU-GAA-GGCCGAAGUGGAG-CAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUUGG--UC-CUAAGCGAUAGGCG-A-G-CGCC----GU
UCCGA--------AGGGACGGGCG----AUAG---CCUC-----------------CGU-
--------------UGCCCUC------AGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAAUCCGGGGCGGCG---------GAGACGGGCGCC-GCGA--------
---------------------------GGCGCCC--------AGUG-CGG---UAAC---
-----GC-AA---GC--------------------GAUC-CCGGA-GAAGCCGGCGGGAG
CC-CCGGGGAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCCG-----G-G
-----CG-----CC----------------CUGG-AAC-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GCGCC-UUG-GAA--AG---------
------------------------------------------------------------
CGUCGCGGUUCCGGCGGCGU-CCGGUGAG-CUCUCGCUGGC-CCGUGAAA-A-UCCGGGG
GAGAGG-------------------------------------------GUGUAAAUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCAU-
GUUGGA-CCAAUGUAG-GUAAGGGAAGUCGGC-AAGCCGGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGCUG-GGUCGGUC------GGGCUG--GGG-CGCGAA-GC
--GGG-GCUGGGCGCGCGCCGCG---GCUGGACGAGGC-GCCG--CCC------------
---------------------------------------------------GCCCCCG-C
CCCCCCUUU---------CCCCG-------------------------------------
------------------------------------------------------------
-----CUCCCGCUCG-----CCGGGG--------------CGC-----------------
-------------CGG--GGG-----------------------------GGGGG-----
--G-----------------------------UCA--GCGG-------------------
------------------GCGGC-------------------------GCG-G-CGGCGG
CGACUCUGGACGCGCG-CCGG-GCCCUUC-------------------------------
------CCG----UGGAUCGC-----CC-CAGCUGCG-GCGGGCGCCGCUCGCCCCCCUC
CUUGCCCCUCCGCCCCC--CCGCU--CC-------------------------CGGCGCC
CC-U-CCCGUC-------GGCCGUCGUCCCGG------------------CCGC-CCCCC
G-----UCC---CG----AGCGC--CCUCCCC-----GCGAGGGCGCGAGGGGCGGCGGC
GGCG---GCCGCGGGCGCGGCGG-------CGGCG-G---GGGGGGGCCCGCC---GGCG
GCGCCGG----GCGGGGCGGUCC----CGGGCGGG-------GGGGGUCUCCGG------
-GCCGGCGCCCCGCCU----CGGCCG-GCG--CCUAGCAGC--CGGCUUAGA--ACUGGU
GCGGACCAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCG--
--CG-G------------CGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACC----UAC-UC
UCCAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGGCGCUGUGAAGAGACAUGAGAGGUGUAGAAU-AAGU
GGGAGGCC---CCGCGGUCGCG-------------------------------CGACCC-
----------------------------------GCGCCGCGGCCCGGCC-GC-CGGUGA
AAUA-CCACUACUCUGAUCGUUUUUUCACUUACCC-GG-------U-GAGGCGGG----G
GG-----------GC-------GA--GCCC--------CGAG-GGGCU-CU-CGCUUCU-
-------------------------GGCG-------------------------------
-------CCAA--GCGC------------------C------------------------
--------------------CG----------GC--------------------------
GCGCGC-----CGG----------------------------------GCG------CGA
------------------------------CCCG----CU--------------------
--------------------------------------CCGGGGACA-GCGUCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCA-AAGCGUAAC-GCAGGUGUCCUAAGGCGAGCU
CAGGGAGGCCAGAAACCUCCCGUG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUACGAAUACAGACCGUG
AAA-GCGGGGCCUCACGAUCCUUC-----------UGA---CUUUUUGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AU--GUGUUGUUGC
GCUAGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUU-UGGUGUAUGU
GCUUGGCU-GAGG-AGCCAC-U-GGAGCGAGGCUACCAUCUG-UGGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCCCCCUAA-----ACGUAGCGAUACCGCAGCGCCG-----
---------------------------AGGCGCCUCGGUGGGCUCGC----------GAU
AG--------------------------------------------------CC---GGC
CGC------------CGCCCCC-------------------CUCGG--GC--GG--GC--
----------GGUCGGUGCGGAG---CGCCGCUCGUG-GUC--GGGAC-CGGA-----GC
G--CGGACAGAUGUG-GCGCCGCCUCU----CCCCCGCCGCGU-----ACCGCAUGUU--
--------CG-----------------UGGGGAA---------------------CCCGG
UGCU-----AAA----UCAUUCGUAGACGACCUGAU-UCUGGGUCGGGGUUUCGUACG-U
AGCA--------GAGCAGC-UC----------CCU--CGCUGCGAUCUAUUGAGAGUCAG
CCCUCGACACAA--GCUUUUGUC-----------
>Guillardia_theta
--------UUCC--UAGCCCCCAAU-GGUGGAUA-UCUUGGC-UCCU-G---UAUCGAUG
ACGAACGCAG-CAGCGCGCGAUAGGUGUUGUGAUC--C---GCA--AAACUAUAUUUGAU
CAUCGAGUCUUCGAACGCAAAC-GGC---AC----GCUCC-UCAC-------CAUC----
--CG-GU---G----G-AGUA---GCGU-G-CGCC-CGU---CUGAGCAUCGUUU-----
----------------------------ACACGGU-CUCA-GGUCGG-G-CG-GGAAUAC
CCGUCGAACUUAAGCAUAUCAAUAGACG--GAGGAAAAGAAACUAA-CCAGGAUUCCCUU
AGU-AG-CGGCGAGCGAAUCGGGA-U-CA-GCUCAAGAUUUUAAUCGGCAGUGGUUCCU-
AUGAUC-CACCGCUGAGAUGUAGUC--CU----------AA-GUGGCGCA-----C----
---------------------UCGGGAGA-----------AG---U-------GGUAU--
AUU-------AAGUCU-UUUG---------------------------------------
----GAACA-AAGCG-------CCAUAGAGGGUGAUAGCCCCGUC---------UGU---
G-UAUACCA---AG--UCGUC-UGAGCCUCUCCCUGCCG---AUGCGCCACUCGUGAGUC
GGGUUGCUUG---GGAGUGCAGCCUAAA-U-AGGGUGGUAUA-CUUCAUCCAAAGCUAAA
UAUGGA--C-AGGAGACCGAUAGC-GAAC-A-AGUACCGCGAGGGAAAG-AUGAAA-AGA
AC-UUUGG-AAAGAG-A-GUGAAAUAGUGCUUGAAACCAUUGGGGGG--A-AAGCG-AAU
G---GAGC-UUC-CG----------------------UAAUAUCGAA--GG---AUCUC-
-G----------------------AGC---------------------------------
----------CAGC---GCUU---------------------------------------
------------------------------------------------------------
---------------------------UGGUUG---------------------------
-------------------GAUC-----UGGUGUAAUGACU---UCGA--U--G------
------------AUGCGUCCGU--G-------------------AGUUUUUUCC-CU---
---U------CU------------------CGUGCGUGCG-------UUG----AACAC-
----AACG----AA-------AGA------------------------AUUC--------
---ACUGGCU------------------------UCUUCCUCC-GUG--------UGAGG
CA----GAAGCUUUGAGCUGGA----------GUCUUUCCUUUUUG--------------
---------UUGUU----------------------GUUGG---AAUCG-ACA----CAG
--------AAGGGCUCUUC-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------GU-----------------GA-----------------
------------------------------------------------GAGU--------
-------------------UUCGAUUU-------UUGUUU--------------------
-----------------------------------------------------C---U-C
CACCUCUCCCUUUUUUUU----------CCAAAGGUUGGU-GGA---GGU--------CC
AA--------AGAUU---------------------------------------------
---------------------------------------------------GGCAA----
-------UGGACGUAGGG--GCUCCUUCGACCCGUCUUGAAACACGGACCAAGGAGUCCG
-G-UAUGAGCGCGA-GUGCUCGGGAA-------AGUUA-------CACCCAUG--CGCGU
AGCGAAAG-CAAUGACUGGAAUCUGUUCAUCGAGAACGCUGAUAGACAUUUCCCUCGUUA
CGAGAGAUCUCUA---GAGUCUUUCAAUCUUCUCCUUGAAU---------AGGUAGGUUC
UUAAGGUGAGAAAUUUGGCUAAGCUCCAUAUUGCAUCAUC-GUCCAACC----UA-UCUG
-CC-------------------CUUAG--------------GGUCGAUUGGCUU-GUGAU
----------------------UGAGCGCUCAUACUGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAGCAGGAUGAAGCCAGAGGAAAC-UCUGGUGGAGGUCCGA--AGGCGUUCUGA
CGUGCAAAUCGAUGCUCAGACUUGGGUAUAGGGGCGAAAGACCAAUCGAACCGUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGAG-CUGU----------------
------------------------------------------------------------
-AGCAGUCUUAUCCGGUAAAGCGAAUGAUUAGA-GGAAUCGG-AGA-GUCC-AAACUCU-
U-UGACCUAUUCUCAAACUUUAAACAGGUAAGGA--------------------------
---------------AGUUG-UGUUG-CU--UAGA--U--GAA-----------------
----CA---CAGC-U---GGACG-AU-G--GU----UAGCUCUU-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGC-GGGAUG---AACCGAGAGUGG-UGUUAAGGCGC
CCAACU--AC-GCG-CU-CA---UU-AGAUCCC-AGGAAAGGUGUAGGUGCGUAUGGACA
GCAGGACGGUGGUCAUGGAGGUCGACA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAACGCAUCAGCCCUGAAAAU-GGAU-GGCGCUCA-AGCGCGU----------GG
CCGAU-ACACCACCGCCGGCGUACA-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GAAUUUGCUCCG
GU-GUGUAGGAGGGC-GUCGUGCCU-UUGCGUC-GAAGCCUU-U-GGCGUGAGCC--U-U
GGUGGAGCAG-GCU-CGAGUGCAGAUCU-UGGUGG-UAGUA-GCAAAA--AUUC-AAGCG
A--G---------------AAUCUU-GAG-GACUGGAGUGGAG-AAGGUUUCC-AUGCAA
ACUGUGUUUGAGCAUGGGUGAGUCGA--UC-CUAAGAGAAUGGGU-A-A-UUCC----GU
UAGAG--------UU------GUG-----CUU----------------------------
--------------CGGGCAU------GUUC----CA-UC-GA-A-AGGGA-AACGGGUU
-AAUA-UUCCCGUACCAUGA---UGCG------GAG--------UUU-------------
-------------------------------------------AAG-CGG---CAAC---
-----GC-AA---AC--------------------GAUC-UUGGG-GACAUCGGUGUGGA
CA-CUGGAGAGA-GU------ACUCU-----U-UUCUAA-UUAACA-GCACC-----A-U
----CAA-----CC----------------AUGG-AAU-C-AG-----------------
---GUUGU-CUGGAGAAGU-----GGUGGU----GUGUC-UGG-AAG--AG---------
------------------------------------------------------------
-CGGUGCCUUCGCGCAUCGU-CUGGUUAG-UUCAUAACGAU-CCUUGAAA-A-CCCGAGG
GAGAAA-------------------------------------------AUCUGACUCCC
G-CGCAUGGUCGUACCCAGAACCGCAUCAGGUC-UCCAAGGU-GAGUAGCCUCGAGU-C-
GGUAGA-CGAAGGUAA-GUAAGGGAAGUCGGC-AAAAUGGAUCCGUAACUUCGG-GACAA
GGAUUG-GCUC-U-AA--GGGUUG-AGCAUCGUC-----GCAC----GUU--------UC
--CUG----CGGU---UCUUGAGC--GCGUGUU------CGAG-----------------
--------------------------------------------------------AG-A
C------------------UC---------------------------------------
------------------------------------------------------------
-------GAUGCUC----------UC--------------G-------------------
--------------AG--UC----------------------------------------
-------------------------------------UCUC-------------------
----------------------------------------------------CUCG----
-----------GC--U-CAU--ACCAUGC---------UUCU------------------
------UUG---------CAG-----GA--GGCU----AUAGA-G---------------
-------------------AGAUA----------------------------UAGG----
------------------AGUU--------------------------------------
--------------------CUC--GGAUCUUC--------------------CUCUUCC
ACUG---A-----------------------GA-------ACCA----------------
------------------------------------------UC----------------
---UGAACUA-UGGUG----CACGAUUGUGAAUAAAACAAC--CAGCUUAGA--ACUGGU
ACGGACAAGGGGAAUCCGA-----CUGUUUAAUUAAAACAUAGCAUUGCGAUGGCCGG--
--AA-A------------UCGGUGUUG-ACGCAAUGUGA-AUUCUGCCCAGUGCUCUG-A
AUGUUAAUGUGAA--------------GAAA--------------UUCAAGGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACU----UAC-CA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGAAGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGCUUUGACUCUAGUCUGGUUUUGUGGAAUGAGUCGAGAGGUGUAGCAU-AAGU
GGGAGC-----------------------------------------------UUCG---
------------------------------------------------GC-AA-CAGUGA
AAUA-CCACUACUCUUGGUCUUUUUCCACUCACCC-CG-------U-UAGUCCGG-----
-A-----------GG-------CG--GCCUCGGUUGUUUACCUAGGCU-C--UCCUUUAU
UGUUU-------------------GUGUA-------------------------------
------AUCUG--GGAG------------------AACA---------------------
-------------------UCU----------CCCU------------------------
CUCGGGAAG--UUU----------------------------------CUC------CUA
------------------------------CCGG----UA--------------------
--------------------------------------CGGAGGACA-UAACCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGCUA-AAAGAUAAC-GCAGGUGUCCUAAGAUGAGCU
CAGUGAGAACAGCAAUCUCAUGUG-GAGUA-GAAGGGCAA-AAGCUCAUUUGAUU-UGGA
----------------------------------UUUUCA--GUACGAAUACAAACUGUG
AAA-GCAUGGCCUAUCGAUCCUUU-----------ACG---ACUUCGAAG----------
----------UAUGAAGCUAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCGAGCGUUCAUAGCGACGUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACAAAGCGUUGGAUUGUUCACCCACUGACAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AC--AGGUCGUCGU
GAUAGU-AAU-UCAGCUCAGUACGAGAGGAA-CCGUUGAUUCAGAUAAU-UGGUCUUGGC
ACUUGGCU-GAGA-AGCUAU-C-GGUGCGGAGCUACCAUCUG-UCGGAUUAUGGCUGAAC
GCC-UC--UAAGCCAGAAGCCUUGCUAG-----AAACGACGAUAGACAAUCUCUC-----
---------------------------CUGGUUUCGAUGUGAUAUCC-----------AC
AG--GGC---------------------------------------AUAGUGUA---AGA
GCA---------AUGGGGGUAAA---------------------CC--CUU-UU--GC--
-----------UCUUGUGCCGAAU--GUACCCGUGUCAAUCAGAGUAA-CGGU---GAGC
GUGGGAGUGAGUGAUGACUCGUUGUGUA---UAUCU------------------------
-----------------------------------------------------------U
ACUU-----CUU--------UUCGUUAAGAAUGGAG----AGGACAC---AUCGU--G-U
UUUC--------AGUAUAU-CU----------C----UACGAGGAUAAACGGGAGGGUAC
AAAGGGGUUGCUU-UUUCCCUUU-----------
>Homo_sapiens
--------------CGACUCUUAGC-GGUGGAUC-ACUCGGC-UCGU-G---CGUCGAUG
AAGAACGCAG-CUAGCUGCGAGAAUUAAUGUGAAU--U---GCA--GGACA--CAUUGAU
CAUCGACACUUCGAACGCA-CU-UGC---GG----CCCCG-GGU---------UCC----
----UCC---C----G----G---GGCU-A-CGCC-UGU---CUGAGCGUCGCUU-----
-----------------------------CGCGAC-CUCA-GAUCAG-A-CG-UGGCGAC
CCGCUGAAUUUAAGCAUAUUAGUCAGCG--GAGGAGAAGAAACUAA-CCAGGAUUCCCUC
AGU-AA-CGGCGAGUGAACAGGGA-A-GA-GCCCAGCGCCGAAUCCCCGCCCCGCG-GC-
GGGG---CGC--GGGACAUGUGGCG--UA----------CG-GAAGACCC--GCUC----
---------------------CCCGGCGC-----------CG---CUCGUG--GGGGG--
CCC-------AAGUCC-UUCU---------------------------------------
----GAUCG-AGGCCC---AGCCCGUGGACGGUGUGAGGCCGGUA---------GCG---
G--CCCCCG---GC--GCGCC-GGGC----------------CCGGGUCUUCCCGGAGUC
GGGUUGCUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGU-CAAC-A-AGUACCGUAAGGGAAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUAAGAGG--U-AAACG-GGU
G---GGGU-CCGCGCAGU-------------------CCGCCCGGAG--GAUUCAACCC-
-GGCGGCG--GGUCCGGCCGUGU-CGGCGG--CCCGGCG-GAUCUUUCCCGCCCCCCGUU
CCUC-CCG-ACCCCUCCACCCGCCC--------------UCCCUUCC-CC-CGCCGCCC-
--CUCCUCC----UCCUCCCCGG------------------AG-GGGGCGGGCUCCGGCG
GGU---GCGGGGGUGGGCGGGCGGGGCCGGGGGUGGGGUCGGCGGGGGACC-GUCCCCCG
--ACCG-GCGACCGGCCGCCGCC-----GGGCGCA-UUUCC---ACCG-CG--GCGGU--
------GCGCCGCGACCGGCUC--C-------------------GG------GA-CG---
---G------CU------------------GGGAAGGCCC--GGC--GGGGAAGGUGGCU
---CGGGG----GGCCCCGUCCGUCCGUCCGUCCGUCCUCCUCCUCCCCCGU-CUCCG--
CCCCCCGGCC------------------------CCG-CGUC--CUCCCUCGGGAGGGCG
CGCGGGUCGGGGCGGCGGCGGCGGCGGCGGUGGCGGCGGCGGCGGC----GGCGGCGGGA
CCGAAACCCCCCCCGA---GUGUUACAGCCCCCCCGGCAGCAGCACUCG-CCGA--AUCC
--------CGGGGCCGAGGGAGC--GAGACCCGUC----------------GCCGCGCUC
UCCCCCCU--------CCCGGCGCC------------------CACCCCCGCGGGGA---
------------------------------AUCCCCCG----------------------
-------------CGAGGGGGGUC----------------------UCC-----CCCGCG
GGGG---CG-----------CGC------------------CGGC--------------G
UCUCC-------------------------------------UCGUGGGGGGGC----CG
GGCCA-------CCCCUCCCACGGCGC-------GACCGCUCUCCCACCCCUCCUCCCCG
CG----CCCCCGCCCCGGCGACGGGGG--GGGUGCCGCGCGCGGGUCGGGGGGC---G-G
GGCG----GACUGUC-------------CCCAGUG--CGC-CCC---GG-----GCG-GG
UC--------GCGCCGUC--GGGCCCGGGGG---AGGUUCUCUCGGGGCCACGCGCGCGU
CCCCC-----------GAAGAGGGGGACGGCGGAG-CGAGCGCACGGGGUCGGCGG----
--------CGACGUCGGCU-ACCCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CACGUGCGCGA-GUCGGGGGCUCG-------CACG------AAAGCCGCCGUGGCGC
AAUGAAGG-UGAAGGCCGGCGCGCU--CGCCGGCCGAGGUGG-GAUCCCGAGGCCUC---
--UC--------------------------CAGUCCGCCGA---------GGG-------
-------------------------------CGCACCACC-GGCCCGUC----UCGCCCG
-C--------------------CGCG----------------CCGGGGAGG-UG-GAGCA
----------------------CGAGCGCACGUGUUAG-GACCCGAAAGA-UGGUGAACU
AUGCCUGGGCAGGGCGAAGCCAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUCU----------------
-------------------------------------CGCAGACCCGACGCACCCCCGCC
ACGCAGUUUUAUCCGGUAAAGCGAAUGAUUAGA-GGUCUUGG-GGC-C-GAAAC-GAUC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCG--U--GGA-----------------
----GC---CGGG-C---GUGGA-AU-G--C-----GAGUGCCU-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUUGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGCCGGCAGUCGAGAGNGGACGGG-----AGCGGCGGGGGCGGC
GCGCGCNCGCGCGCGUGUG---------GUGUGCGUCGGAGGGCGGCGGCGGCGGCGGCG
GCGGGGGUG---UGGGGUCCUUCCCC-CGCCCCCC--CCC---CCACGCCUCCUCC--CC
UCCUCCCGCC--CAC--GCCCCGCUCCCCGCCCCCGGAGCCCCGCGGACGCUACGCCGCG
AC-GAGUAGGAGGGCCGCUGCGG-U-GAGCCUU-GAAGCCUA-G-GGCGCGGGCC--C-G
GGUGGAGCCG-CCG-CAGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AACUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUGAGAGAUGGGCG-A-G-CGCC----GU
UCCGA--------AGGGACGGGCG----AUGG---CCUC-----------------CGU-
--------------UGCCCUC------GGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAAUCCGGAGUGGCG---------GAGAUGGGCGCC-GCGA--------
---------------------------GGCGUCC--------AGUG-CGG---UAAC---
-----GC-GA---CC--------------------GAUC-CCGGA-GAAGCCGGCGGGAG
CC-CCGGGGAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCAG-----G-G
-----CG-----CC----------------CUGG-AAU-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GUGCC-UUG-GAA--AG---------
------------------------------------------------------------
CGUCGCGGUUCCGGCGGCGU-CCGGUGAG-CUCUCGCUGGC-CCUUGAAA-A-UCCGGGG
GAGAGG-------------------------------------------GUGUAAAUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCAU-
GUUGGA-ACAAUGUAG-GUAAGGGAAGUCGGC-AAGCCGGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGCUG-GGUCGGUC------GGGCUG--GGG-CGCGAA-GC
--GGG-GCUGGGCGCGCGCCGCG---GCUGGACGAGGC-GCCG--CCGCC-CCCCCC-AC
GCCCGG-GGC-ACC--CCCCUCG-----CGGCCCUCCCCC-----GCCCCACCCCGCG-C
GCGCCGCUCGC-------UCCCUCCCCGCCCCGCGCCCUCUCUCUCUCUCUC--UCCCCC
GCUCC-----------------------------CCGUC---------------------
---C-UCCCCCCUCC-----CCGGGGG-------------AGCG---CCGCGU-------
------------GGGG--GCGGC-GGCGGGG-GGAGAAGGG-------UCGGGGC-----
--G--GCAGGG-----GCCGGCGGCG---G-CCCGCCGCGG--GGCCCCGG---CGGCGG
GGGCACGGUCCCCCGCGAGGGGG-GCCCGG-GCACCCGGGGGG--CCGGCG-G-CGGCGG
CGACUCUGGACGCGAG-CCGG-GCCCUUC-------------------------------
------CCG----UGGAUCGC-----CC-CAGCUGCG-GCGGGCGUCGCG-GCCGCCCCC
GGGGAGC--CCGGCGGGCGCCGGCGCGCCCCCCCCCCCACCCCA---------CGUCUCG
UCGCGCGCGCGUCCGCUGGGGGCGGGGAGCGGU-----------------CGGG-CGGCG
G--CGGUCGGCGGGCGGCGGGGC--GGGGCGGUUCGUCCCCCCGCCCUACCCCCCC-GGC
CCCGUCCGCCCCCCGUUCCCCCCUCCUCCUCGGCGCG--CGGCGGCGGCGGCGGCAGGCG
GCGGAGGGGCCGCGGGCCGGUCC-CCCCCGCCGGGUCCGCCCCCGGGGCCGCGGU--UCC
GCGCGGCGCCUCGCCU----CGGCCG-GCG--CCUAGCAGC--CGACUUAGA--ACUGGU
GCGGACCAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCG--
--CG-G------------CGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACC----UAC-UA
UCCAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGGCACGGUGAAGAGACAUGAGAGGUGUAGAAU-AAGU
GGGAGGCCCCC--GGCGC--------------------CCCCCCGGUGUCCCCGCGAGGG
G-C-CCGGGGCGG----------------GGUCCGCCGGCCCUGCGGGCC-GC-CGGUGA
AAUA-CCACUACUCUGAUCGUUUUUUCACUGACCC-GG-------U-GAGGCGGG----G
GG-----------GC-------GA--GCCC--------CGAG-GGGCU-CU-CGCUUCU-
-------------------------GGCG-------------------------------
-------CCAA--GCGC------------------C------------------------
--------------------CG----------GCCG------------CGC---------
GCCGGC-----CGG----------------------------------GCG------CGA
------------------------------CCCG----CU--------------------
--------------------------------------CCGGGGACA-GUGCCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCA-AACGGUAAC-GCAGGUGUCCUAAGGCGAGCU
CAGGGAGGACAGAAACCUCCCGUG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUACGAAUACAGACCGUG
AAA-GCGGGGCCUCACGAUCCUUC-----------UGA---CCUUUUGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AU--GUGUUGUUGC
CAUGGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUU-UGGUGUAUGU
GCUUGGCU-GAGG-AGCCAA-U-GGGGCGAAGCUACCAUCUG-UGGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCCGCCCAG-----GCGGAACGAUACGGCAGCGCCG-----
---------------------------CGGAGCCUCGGUUGGCCUCG----------GAU
AGCCGGUCCCCCGCCUGUCCCCGCCGGCGGGCCGCCCCCCCCCUCCACGCGCCC---CGC
GCG---C--GCGGGAGGGCGC-------GUG----------CCCCG--CC--GC--GCGC
CGGGACCGGGGUCCGGUGCGGAG---UGCCCUUCGU--CCU--GGGAAACGGG-----GC
G--CGGCCGGAGAGGCGGCCGCCCCCU----CGCCCGUCACGC-----ACCGNACGUU--
--------CG-----------------UGGGGAA---------------------CCUGG
CGCU-----AAA----CCAUUCGUAGACGACCUGCU-UCUGGGUCGGGGUUUCGUACG-U
AGCA--------GAGCAGC-UC----------CCU--CGCUGCGAUCUAUUGAAAGUCAG
CCCUCGACACAAG-GGUUUGU-C-----------
>Latimeria_chalumnae
---------UGA--CAACACUUAGC-AGUGGAUC-ACUCAGC-UCGU-G---CGUCGAUG
AAGAACUCAG-CUAGCUGCGAGAAUUAGUGCGAAU--U---GCA--GGACA--CGUUGAU
CAUCAACACUUCAAACGCACCU-UCC---GG----CCCCG-GGU---------UAC----
----UCC---C----G----G---GGCU-A-UGCC-UGU---CUGAGGAUCAUUU-----
-----------------------------UAAUCAACUCA-GAUCAG-A-CG-UGACAAC
CCACUGAAUUUAAGCAUAUUACUAAGCG--GAGGAAAAGAAACUAA-CCAGGAUUCCCUC
AGU-AA-CGGCGAGUGAAGAGGGA-A-GA-GCCCAGCGCCGAAUCCCCGCUCGUCU-GG-
CGGG---CGC--GGGAAAUGUGGCG--UA----------CA-GAAGACCC-ACCUC----
---------------------CCCGGCGC-----------CG---CUC-----GGGGG--
CCC-------AAGUCC-UUCU---------------------------------------
----GAUUG-AGGCUU---AGCCCACGGACGGUGCGAGGCCGGUA---------GCG---
G--CCCCGG---GC--GCGCC-GGGA----------------CCGGGUCUUCUCGGAGUC
GGGUUGUUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGU-CGAC-A-AGUACCGU-AGGGAAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUGAGAGG--U-AAACG-GGU
G---GGGU-CCGCGCAGU-------------------CCGCCCGGAG--GAUUCAACUC-
-GGCGUGCC-GUGCCGGCCGC-CCCGGU---------------------------GUG--
---G-CGG-AUCCC----CUCGC-------------------------------------
------------------------------------------------------------
-----------------------------GGGAACG------------------CCCCCG
UCGGCGUG---CGGGCCCCCGCC-----GGGUGCA-UUUCC---UCCG-CG--GUGGU--
------GCGCCGCGACCGGCUC--C-------------------GG------GU-CG---
---C------CU------------------GGGAUG---------------------GC-
----UGCG----GG------CGG-------------------------AGGU--------
------AGCU------------------------GGC-CUCU--CCG----------GAG
A-----UCAG---UGUC-------------------------UGCC--------------
----------CCCC---------------------UGCCGCA--CCUCG-GCGU--CUCC
--------CGGGGCCGUGGAA----GAUGACCGCC----------------GCCGCGCCC
UCCUC-------------------------------------------------------
------------------------------UCCCCCCU----------------------
------------------------------------------------------------
--------------------CGG------------------GGGC---------------
------------------------------------------------UGAGA-----CA
GGGGC-------CCCCGCUGCCGGCGC-------GACUGU-C------------------
--------------------------------------------------GAAU---G-G
GGCG----GACUGUC-------------CUCAGUG--CGC-GCC---GG-----ACG-CG
UC--------UCGCCGCC--CGG---CCGGG---AG--------GCU------------C
UCU-------------------------------AUCGGGCGCCAGGGGUCUGCGG----
--------CGAUGUCGGU--UUCCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CACGUGCGCGA-GUCGAAGGGCAG-------AGCG------AAACCCCAU--GGCGC
AAUGAAAG-UGAGGGCCGGCGCG----GGCCGGCUGAGGUGG-GAUCCCCACGCCCC---
----------------------------------GUGCGGG---------GGG-------
-------------------------------CGCACCACC-AGCCCGUC----UCACCCG
-C--------------------AGCG----------------UCGGGGAGG-UG-GAGCA
----------------------UGAGCGUGCGUGAUAG-GACCCGAAAGA-UGGUGAACU
AUGCCUGGGCAGGGCGAAGCCAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGUG-CUCG----------------
-------------------------------------------------------AGCGA
ACGCAGUUUUAUCUGGUAAAGCGAAUGACUAGA-GGUCUUGG-GGC-C-GAAAC-GAUC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCU--U--GGA-----------------
----GC---CGGG-C---GUGGA-AU-G--C-----GAGUGCCU-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUGUGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUUGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGCGGGCGACCGG-------------------------------
------------------------------------------------------------
----GGC------CAC--------------------------------------------
---------------------------------------------GAUGGCUAUCCCGCG
AC-GAGUAGGAGGGCCGCCGCGG-U-GAGCACU-GAAGCCUA-G-GGCGCGGGCC--C-G
GGUGGAGCUG-CCG-CGGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AACUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUAAGAGAUGGGCG-A-A-CGCC----GU
UCCGA--------AGGGACGGGCG----AUGG---CCUC-----------------CGU-
--------------CGCCCUC------AGCC----GA-UC-GA-A-AGGGA-GUUGGGUU
-CAGA-UCCCCGAAUCCGGAAUGGCG---------GAGAGGGGCGCC-GCUGUU------
---------------------------GGCGUCC--------AGUG-CGC---CAAC---
-----GC-AA---AC--------------------GAUC-CCGGA-GAAGCCGGCGGGAG
CC-CCGGGGAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCAG-----G-G
-----CG-----CC----------------CUGG-AAU-G-GG-----------------
---UUUGC-ACCGAGAGAG-----GGGCCC----GCGCC-CUG-GAA--AG---------
------------------------------------------------------------
CGUCGCGGUUCCGGCGGCGU-CCGGUGAG-CUCUCGCUGGC-CCUUGAAA-A-UCCGGGG
GAGAAG-------------------------------------------GUGUAAAUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCAU-
GUUAGA-ACAAUGUAG-GUAAGGGAAGUCGGC-AAGCCAGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGCUG-GGUCGGUC------GGGCCG--GGG-UGCGAA-GC
--GGU-GCUGGGUACGCGCCGCG---GCUGGACGAGGC-GCCG-----------------
------------------------------------------------------------
-------------------CCUC-------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------CGG--------------------------------------------
------------------------------------------------------------
----------------------------------------------------G-CGGCGG
CGACUCUGGACGCGAG-CCGG-ACCCUUC-------------------------------
------CUG----UGGAUCGC-----CU-CAGCUGCG-GCGCGCGC--------------
------------------------------------------------------------
-----------------GGGC---------------------------------------
-------------------------CCCCCG-----------------------------
--GG---G----------------------------------------------------
------------------------------------------CU----------------
----GGCGUCUCGCCU----CGGCCG-GCG--CCUAGCAGC--UGACUUAGA--ACUGGU
GCGGACCAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCG--
--CG-G------------UGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGGCACUGUGAAGAGACAUGAGAGGUGUAGGAU-AAGU
GGGAGGC----------------------------------------------CUCG---
-----------------------------------------------GCC-GC-CGGUGA
AAUA-CCACUACUCUUAUCGUUUUUUCACUUACCC-GG-------U-GAGGCGGG----G
GG-----------GC-------GA--GUCC--------CGAG-GGGCU-CU-CGAUUCU-
-------------------------GGUG-------------------------------
-------ACAA--GCGC------------------C------------------------
--------------------CG----------GUU-------------------------
--CGGU-----CGG----------------------------------GUG------CGA
------------------------------CCCG----CU--------------------
--------------------------------------CCGGGGACA-GUGGCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCA-AACCGUAAC-GCAGGUGUCCUAAGGCGAGCU
CAGGGAGGACAGAAACCUCCCGUG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUAUGAGUACAGACCGUG
AAA-GCGGGGCCUCACGAUCCUUC-----------UGA---CUUUUUGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AU--GUGUUGUUGC
AAUAGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUU-UGGUGUAUGU
GCUUGGCU-GAGG-AGCCAA-U-GGUGCGAAGCUACCAUCUG-UAGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCUCCCUAA-----ACGUAACAAU-UAAUAGC-CUG-----
--------------------------------UUUAGCUCCACCCUUU---------GAU
UGU---------------------------------------------AGCACU---AGU
AGG------ACAUUUUGAACAA-------------------UUUCAUCAUA-CC--UU--
----------ACCUGGU------------CUCGCUU--UUU--UGAAACCUCA-----GA
A--AUCCUAAAAUGGGGGUUUGUCCCA----GGGGUGCAACA------GGUAC-------
--------UG---------------------------------------------CAUUG
CACU-----A------CCA--UGUGGGAGAUCAGGGCUCAAUCCCUGUUGUGGAUCUC-C
CAC---------AGGCAAC-------------UAA--C--ACCAAGA-------------
CACAUUACAAAGG-CAAUGCU-C-----------
>Leishmania_major
----------------ACGUGUCGC-GAUGGAUG-ACUUGGCUUCCU-A---UUUCGUUG
AAGAACGCAG-UAAAGUGCGAUAAGUGGUAUCAAU--U---GCA--GAAUC--AUUCAAU
UACCGAAUCUUUGAACGCAAAC-GGC---GC----AUGGG-AGAAGCUC---UAUU----
GUGUCAU--CC----C----C---GUGC-A-UGCC-AUAUU-CUCAGUGUCGAGU-----
---------------------------UUACAGAC-CUGA-GU-GUG-G-CA-GGACUAC
CCGCCGAACUUAAGCAUAUUACUCAGCG--GAGGAAAAGAAAACAA-CCGUGAUUCUCUC
AGUGAG-CGGCGAGCGAAGAGGGA-ACGA-ACUCGUUGCCGAAUCGGGUCUUAC------
-AAG---GCC--UUGAGUUGUGGCA--CAA---------AU-AUCAUUUC--GUGG----
---------------------UUGGUGCA-----------GG-----------AGUGG--
CGA-------AAUUCA-AGCG-CAAAGCAAACCCGUUGCUGAA------UACAACCCUUC
AUGUGAGUA-UUGAG-------CCAAAGAAGGUGUUAGCCCAUUG---------AGC---
C--AUAAACCU-GA--GCGCCUCAUG----------------AACUGUAUUAAGCGAGUA
GCACUGUUUG---GGAAUGCAGUGUCAAGU-UGGCAGGUAUU-UGUCUGCCAAAGUUAAA
UACAGAGUA-GGAAGACCGAUAGC-GAAC-A-AGUAGCGUGAGCGAAAGUUUGAAA-AGC
AC-UUUGG-AAAGAG-A-GUGAAAUAGAACCUGAAGUCGUGACAAAG--A-CAAUG-GAA
G---UACCUCCAUUUCAA------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------C-------------------GG------CC-AG---
------------------------------AACCAGCC-----------------CUAC-
------UG----CA-------UUA------------------------------------
------UCCU------------------------GU--CGGGGGUCAA------AAUCCG
------GCGG------G-------------------CAACGAAGUG--------------
----------CAAG------------------------------AAUCU-UGG-----GU
--------CUUGGUG---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------A--------------
----------------------------------------------AAUGAG--------
---------------------CGGAGUA---UUUGAGCU---------------------
-----------------------------------------------------------G
UGCA----CGGCGC-----A--A--------GCCGCACGC-ACU---GG----------U
UUC------UUCUCCGUG--------------------------------------AUGC
U-------------------------------------------CCAUGUUGGCGA----
---------UGGAAAUGG--GGUGCCCCCACCCGUCUUGAAACACGGACCAAGGAGUCAA
-A-CAGACGCGCAA-GGGAGGAGAUAUG-----GUUGC-----CAGUACUUCU--CUCGU
ACUGAAAG-GGAGAUGCAA-------AAUGCAUCUGUGGUGU-GCACACGU---------
------------------------------------CAAAU---------CCG-------
-------------------------------UUU-GAUUU-GCCCAACA----CCGACCG
----------------------GCCC-----------------UCCGUGGG-UU-GCGUU
----------------------GGAGUGUGCCUGUUUG-GACCCGAAAGG-UGGUGAACU
AUGCCUGAACAAGGUGAAGCCCGGGGAAAC-CCAGGUGGAGGCCUGU--AGCGAUGCUGA
CGUGCAAAUCGCUCGUAUGAUUUGGGUAUCGGAGCGAAAGACUCAUCGAACCACC-UAGU
AGCUGGUUCACAUCGAAGUUUCCCUCAGGAUAGCUGGUG-CUAG----------------
------------------------------------------------------------
UAGAAGUAUUGUGCGGUAAAGCAAAUGAUUAGA-GGCAUUGG-UGU-U-CUUAG-AAUA-
U-CGACCUAUUCUCAAACUUUAAAUGUGCAAACA--------------------------
---------------AACCGUGCCUUAGC--CAAC--U--GCAAG---------------
----GC---CGGA-AAGAAAAGA-AU-U--AG----AGGCACCA-AGUGGGC-C-UUCU-
U-CGG-UAAGCGGAGC-AGGCGAUGC-GGAAUG---AACCGCUUAGGG-AUAUGUGGCGU
CAAAACUUAU-GGG-CU-CAUUCUC-GAUACGU-GAAAAGGGUGUUGGUGGAUAUGGACA
GUUGGACGGUGGCCAUGGAAGUCGGCA-UCCGCUAAGGAGUGUGUAACAACUCACCAACC
-----GAAUCCACCGGCCCCGAAAAU-GGAU-GACGCUUA-AGCCCAA--UUAGUGAUUG
CCCAUUAUUCCUUUGGUAAGGGCGGA----------------------------------
--------------------------------------------AA--------------
---CAAC------UCUUG-----------GAGA---------------------------
----------------------------------------------AAGUGUAGCCCUUC
CG-AUGUAGAUGUGGCCUGGAGG-U-U-AGGAC-GAAGCUUA-U-GGCGUGAGCC--UAA
GAUGGACCGG-CCU-CUAGUGCAGAUCU-UGGUUG-GCGUA-GCAAAG--AUCU-AACGG
A--GAUAUACUCAACAUGCAACGUU-GGA-UACUGGAGCGGGG-AAGGAUUUC-GUGCCA
ACGGCACUCGUACACGAGUUGUUCGG--AAACUGAGCACAACGUU-A-U-AUCGUUUUGU
UAGGAAAGUGAAGGUG----UGUCGGCGGCAG---CUGCUCUC-----------GGGUA-
--------------GCUGUUCG--ACUGGCCA---UA-ACUGA-A-AAGGG-GCAACA--
-GAGA---ACC------------------------------------------------U
GGGAUUAUAUUCCAAAAAGAAAUUGCAUGUGGGU--------AGUGGUAA---UGCG---
-----AA-AC---AC--------------------UUGC-CAGGU-AACAAAUCA-AUCC
-U-CCCCCGGUG-AG-C----UUUCU-----U-UUCACC-AUAAUC-CACAU-----C-U
-----CC-----GG----------------CUUU-GCU-G-GGGCUUGGGCCUUUUUACU
UCUCGCGU-UGUUCGGAGC-----GGGGGC----UCAAG-AUU-GAA--AA---------
-------------------------------------------------------A--UG
CAGCUCUCCCUACGUACUGU-CA-UUGUU-GUGAGUUCUGC-GCAUUAAA-G-CAAAAAC
CUGGGG-----------------------------------------------UGUCCCA
A-CUGCAGACCGUACUCAUCACCGCAUCAGGUC-CCCAAGCA-UAGAAUGCUCUGGU-A-
CAUAGA-GAAAGGUACACUCAGGGAAGUCGGC-AAAAUAGAUGCGUAAGUUCGC-AAGAA
GCAUUG-GCUC-U-GA-GGGCAAA-GUCAGAGA------AAACCG--GAA-GGCCAGUG-
--UCC-UCUCGC--AUGCAGCC----GUUCU--------UCAG-----------------
------------------------------------------------------AUG--U
U-----------------GUUU--------------------------------------
------------------------------------------------------------
-----UGGCGCUCG------CCGCCUU-------------A-------------------
--------------GC--AC----------------------------------------
-------------------------------------GCUGA-UA---------------
------------------GCGACUGUAC---------------------UG-U-CG----
----UCUG--UGAAGG-CUA--CCUU-CCCGAGGC---GUC----GUAACC---------
------CGG----CGU--CUCA----CUCUGGCAC---GGG-------------------
-------------------CC---------------------------------------
------------------GGUC--------------------------------------
------------------UUGGC--GGGUU---------------------------CAC
GCUC---G----------------------------------------------------
------------------------------------------UCUU--------------
-------GUG----------CCGCGU-CCC--ACAAAUUGC--CAACUCAGA--ACUGCU
UACGGC--GGGGAAUCCAA-----CUGUAUAAUUAAAACAUAGGUUUGUGAUGCAUCC--
--AA-G------------UGGUGUAUA-UCGCAAACUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAACGUGAC--------------GAGA--------------UUCACCGACGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCUUC-CA
AUUAGAGACGCGCAUGAAUGGAUUAAUGAGA--UUCCCUCUGUCCCGAGU----UAC-UA
UCUAGCGAAACG-ACAGUCAAGGGAACGGACUUGAAGGGCUAAGCGGGGAAAGAAGA-CC
CUGUUGAGU-UUGACUCCAGUCUGGCUCUGUGCGGCGACAUCUGAGGUGUAGUAU-AGGU
GGAAGC-----------------------------------------------GCAA---
------------------------------------------------GC-GC-AAAUGA
AAUA-CCACCACUCGGAACGUUGCUUCACUUAUCG-AA-------U-GAAGAGAC-CAAU
GGGUUAA------GCG------UA--GUCU--------UCG---GGCU-A--UGCACCG-
--UCU-------AG-GUUU-----GGGAGUAAUUUUAUGGCGGUA---------------
-ACCCCGUCCC-CACGG------------------GAAAGG-GU---GG-----------
----------UGUGCUUUUUCUGCGU--GC--GUCUUCAC--------------GGGCGU
CGCGCGGGCCCCGCUCUUUUUUAUUGCGUUUCCUUCGGGGGGCGUGACUCG------UGG
GUA---------------------------CCCAA---CCGUGCUGUAA-ACUGAACCAA
CGGGAUUGC-----CUCGU-GCAGUUCCGGAGUCUUGUUUCGAGACAUCUGCCAGAUGGG
GAGUUUGGCUGGGGCGGCAUAUCUGUUA-CACGACAAC-GCAGGUGUCCUAAGGCGAGCU
CAGUGGGAACAGAAAUCUCACGUA-GAACA-CAAGCGUAA-AAGCUUGCUUGAUUAACGA
----------------------------------UUUCCA--GUACGAAUCGAGACUGCG
AAA-GCAAGGCCAG-CGAUCCUUUGCGAAGAAUAGGAA---AUAUGAACA----------
----------AAUCAUACCAGAGGUGUCAG-AA--UAAUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AACCUAGCGCCGCAGAAGACGCUAAGGGUUGGAUUGUUCACCCACUGACAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUGGUGAGAUUGUGAA-----------------
---A-GGGAU----------------------------------CUCG--CAGGUAUCGU
GAGGGA-AGUAUUGGGGUAGUACGAGAGGAA-CUCCCAUGCCGUGCCUC-UAGUUUCUGG
GGUUUGUC-GAAC-GGCAAG-U-GCCCCGAAGCCAUCGCACG-GUGGUUCUCGGCUGAAC
GCC-UC--UAAGCCAGAAGCCAAUCCCAAG---ACCAGAUGCC-CACCUCCCAUG-----
---------------------------CCGUGCCUCUAGUUUC-----------------
---------------------------------------------------------UGG
GGU------------UUGUCGAA---------------------CG--GC--AAGUGC--
-----------CCCGAAGCCA-------UCGCACGG---------UGGUUCUCGGCUGAA
CGCCUCUAAGCCAGAAGCCAAUCCCAAGACCAGAUGCCCACUCAUCGAAUCGCCACCUAC
AAGACUGGAGCUUGCUCCCUCGAAGGCGCCAAGUAUAUUCAUGAUCACAAGACAGUCCCU
CUCC-----AAA----CGAGAGAACAUGCAUGGGCU-GGCAUGAGCGGCAUGCUUCAC-U
UCGGUGGGGCUCGAGGGGC-AU----------UUA--CGUCCCGAGGCGCUGAACCUUGA
GGCCUGAAAUUUC-AUGCUCA-G-----------
>Monodelphis_domestica
---------------AACUCUUAGCGGGUGGAUCUACUCGGC-UCGU-G---CGUCGAUG
AAGAACGCAG-CUAGCUGCGAGAAUUAAUGUGAAU--U---GCA--GGACAC-CAUUGAU
CAUCGACACUUCGAACGCA-CU-UGC---GG----CCCCG-GGU---------UCC----
----UCC---C----G----G---GGCU-A-CGCC-UGU---CUGAGCGUCGCUU-----
------------------------------GCGAC-CUCA-GAUCAG-A-CG-UGGCGAC
CCGCUGAAUUUAAGCAUAUUAGUCAGCGAGAGAGAAAAGAAACUAA-CCAGGAUUCCCUC
AGU-AA-CGGCGAGUGAACAGGGA-A-GA-GCCCAGCGCCGAAUCCCCGCCCCGCG-GU-
GGGG---CGC--GGGCCAUGUGGCG--UA----------CG-GAAGACCC--ACUC----
---------------------CCCGGUGC-----------CG---CUCUCGGUGGGGG--
CCC-------AAGUCC-UUCU---------------------------------------
----GAUCG-AGGCAC---AGCCCGUGGACGGUGUGAGGCCGGUA---------GCG---
G--CCCCCG---GC--GCGCCGGGGA----------------CCGGGUCUUCUCGGAGUC
GGGUUGCUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGUCCAAC-A-AGUACCGUAAGGGAAAG-UUGAAA-AGA
ACUUUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUGAGAGG--U-AAACGAGGU
G---GGGU-CCGCGCAGU-------------------CCGCCCGGAG--GAUUCAACCC-
-GGCGGUCCCUGGCCGGCCGUGC-CGGUGGUUUCCGGCGAGAUCUUUCCCGCC--CCU--
-----CGU-UCUUC----CCGACCC---------------CUCCA---CCACGUCGC---
----CCCG----------CGAGG-------------------G-GCGGCGGG---CG---
---------AGGGC---CGGG-------GAGUGAGGUGCCCGCGGGGGACCGCCCCCCCG
--GACG-GAGCCCGGCCGCCGCC-----GGGCGCA-UUUCC---ACCG-AG--GCGGU--
------GCGCCGCGACCGUCUC--C--GG---GACGGC----UGGG---AAGGC-CG---
---G------GCUUU--------------UCCCUGGGCAGGUGGCUCGGGG---GUGGCG
--GGGGCCA-GAGG-------GGGCC----------------------CGGGUCGCCGUG
UGGGGUGGCG------------------------GGG-UCGG--UCGGUCCGCCGGCCGG
C-----CUCGUCUUCCCCUCG--------------GCGCCCGCCUCUCGUGGGUCCUCCG
CCGUCGCAGCCCCCGA---GUGUUAUAG-CCCCCCGGCAGUAGCUCUCG-CCAGC-AUCC
--------CGGGGUCGAGGAAA---GAUGACCGCC----------------GCCGCGGCU
UUCCCCCG--------CCGGAGCCC------------------CUCCGCCGCCCGUC---
-----------------------------GCCGCCCCU----------------------
-------------CGCGGGUGG---------------------------------GGGCG
GGUG---CG----------CCGGU---------------GCGGGC---------------
------------------------------------------------CCGGGUU-CCCG
GGGGACGGGCCGCCCCUCCCCCGGCGC-------GACUGCUCU----CCCC---------
------------------------------------------------GAAACC---G-G
GGCG----GACUGUC-------------CUCAGUG--CGC-CCC---GA-----CCG-CG
UC--------GCGCCGCC--GGG---CUCGG---GG--------ACCGCU--GCUCUCGU
CGC-------------------------------ACGAGGCGCCCGGGGUCAGCGG----
--------CGAUGUCGGC--CCCCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CACGCGCGCGA-GUCAGGGGCUCCG------CACG-----AAAGCCACCCGUGGCGC
AAUGAAGGAUGAAGGCCCGGCGCC---CGCCGGCCGAGGUGG-GAUCCCGAGGCCUC---
----------------GGUCCU-UCU-UCCCGUCCUGCCGA---------GGG-------
-------------------------------CGCACCACC-GGCCCGUC----UCGCCCG
-C--------------------CCCG----------------CCGGGGAGG-UG-GAGCA
----------------------UGAGCGUGUGUGUUAG-GACCCGAAAGA-UGGUGAACU
AUGCCUGGGCAGGGCGAAGCCAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUCUCGCAGUGGUCGUCCGG
UCGGAGCGGGGGAGCGCCCCCCUCCCUCGGGGGGCGGGGGUUCCCCUGGCACCCGCCGCC
ACGCAGUUUUAUCCGGUCAAGCGAAUGAUUAGA-GGUCUUGG-GGC-C-GAAAC-GAUC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCU--U--GGA-----------------
----GC---CGGG-C---GUGGA-AU-G--C-----GAGUGCCU-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUUGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGCUGGCAAUGGGCAAAAGCAG----------------------
------------------------------------------------------------
----GAA------CAGAAACGUGUUGUUUCCCGAGAACGGAUUCCGCGCGCGGGAGGAAG
-----GCGCGAACUC--ACUCCUC---------------------GGGGGCUAGGCCGCG
AC-GAGUAGGAGGGCCGCCGCGG-U-GGGCCUG-GAAGCCUA-G-GGCGUGGGCC--C-G
GGUGGAGCCG-CCG-CGGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AACUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUGAGAGAUAGGCG-A-G-CGCC----GU
UCCGA--------AGGGACGGGCG----AUGG---CCUC-----------------CGU-
--------------UGCCCUC------GGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAAUCCGGAGUGGCG---------GAGACGGGCGCC-GUGA--------
---------------------------GGCGUCC--------AGUG-CGG---UAAC---
-----GC-GA---CC--------------------GAUC-CCGGA-GAAGCCGGCGGGAG
CC-CCGGGGAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCAG-----G-G
----CCG-----CC----------------CUGG-AAU-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GCGCC-UUG-GAA--AG---------
------------------------------------------------------------
CGUCGCGGUUCCGGCGGCGU-CCGGUGAG-CUCUCGCUGGC-CCUUGAAA-A-UCCGGGG
GAGAGG-------------------------------------------GUGUAAAUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCAU-
GUUGGA-ACAAUGUAG-GUAAGGGAAGUCGGC-AAGCCGGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGCUG-GGUCGGUC------GGGCUG--GGG-CGCGAA-GC
--GGG-GCUGGGCGCGCGCCGCG---GCUGGACGAGGC-GCCG--CCGCU-CCCCCU---
-CCCGGCG----CUCUCCCGCCGG--ACGCC---UCCCCGC---GGCCCCCCCGCCCG-C
UCCCCGCCGGGUUCCCUUCCCCG--CGGCUCCCCUGGCCUC-CCCCCCUCCCACGCCUCC
CCGCCGGCCAAACCGCGGCGGUGGCGGGCGGGGGGGGACGGGGGGGGCGCGCGGGGGGUC
GGGGGCGCGGGUCCC----GCCCGCGUCUCCCCUCCCUCCCGCCCCCCCUCGCUCCUCUC
CCACCCUCCCCACCGCG-GCGGUGGGGGGGCAGGGGGGGGGAUCGGCGCCAGGGGGUUCC
AAGUCGC-GGGGUCGGCCCGGCGGGGGUUG-GUCGGUGCGGUCGG----GG-----UCCG
GGGUUCGG-----GCCCGGCGGGUGCCCGG-GAAC-CGGGGG---UCGGCG-G-CGGCGG
CGACUCUGGACGCGAG-CCGG-GCCCUUC-------------------------------
------CCG----UGGAUCGC-----CC-CAGCUGCG-GCGGGCGUCGCG-GCCGGGCCC
GGGGAGC--CCGGGGGC--GGGCC-UGCUCGGCCCGCCGGCCU----------CGGGGGG
GUCU-GCCCUG------GGGCGCGCGCGGC-------------------------UCCCC
G-----CCCG--CG-----GCCC--CCCUCC-------GGGGGGUGU------C---GGC
GGCG---G-GGUGGGUCCGCGCG-------CCCCG-----GGUGCC--CCUCC---GGCC
GCG--GGA--UCUGUGGCGGCCCUCCCCCCCCGGGUGC-CCCCCCGGGCCUCGGU---CC
CCGCGGCGUCCCGCCU----CGGCCG-GCG--CCUAGCAGC--UGACUUAGA--ACUGGU
GCGGACCAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAGGGCCCG--
--CG-G------------CGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUUA
AUUAGUGACGCGCAUGAAUGGAUGAACGAAGAUUCCCCACUGUCCCUACC----UACUUA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGACCC
CUGUUGAGC-UUGACUCUAGUCUGGCACGGUGAAGAGACAUGAGAGGUGUAGAAUAAAGU
GGGAGGCCCCCCAGGUGCCCCCCGGGGCCCCGCCCCCGGGCUCCCCCGCGAGGAGGAUCC
CCCGGGUCGGCGGGCCCCCCCCCGGGGUCGGCGAGCCGGCCUUCCGGGCC-GC-CGGUGA
AAUACCCACUACUCUGAUCGUUUUUUCACUGACCC-GG-------U-GAGGCGGG---GG
GA-----------GC-------GA--GCCC--------CGAG-GGGCU-CU-CGCUUCU-
-------------------------GGCG-------------------------------
-------CCAA--GCGC------------------C------------------------
--------------------CG----------GCCG------------CAC--------G
GCGCGC-----CGG----------------------------------GCG------CGA
------------------------------CCCG----CU--------------------
--------------------------------------CCGGGGACA-GUGUCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCACAACCGUAACGGCAGGUGUCCUAAGGCGAGCU
CAGGGAGGACAGAAACCUCCCGUG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUAUGAAUACAGACCGUG
AAA-GCGGGGCCUCACGAUCCUUC-----------UGA---CCUUUGGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AG--GGGUUGUCGC
CAUAGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUUAUGGUGUAUGU
GCUUGGCU-GAGG-AGCCAA-U-GGGGCGAAGCUACCAUCUG-UGGGAUUAUGACUGAAC
GCC-UCCGUAAGUCAGAAUCCCCCCUAA-----GCGUGACGAUACCGCAGCGCCG-----
---------------------------AGGAGCCUCGGUGGGCCACG----------GAU
AGCCGGG---CUGCCCGUGCUCCCU------------------------CCCUC------
------------------------UGUUUCG----------GCGGG--GG--GG--CCUC
GGGGGCCGGGGCCCGGUGCGGAG---GGCCGUUCGC--GCC--GGGGGCUGGA-----GA
G--CGGCCGCGAAGGGGGGCCGCCUCU----CACCCGGAGCGC-----AGCGCAUGUU--
--------CG-----------------UGGGGCA---------------------CCUGG
UGCU-----AAA----UCAUUCGUAGACGACCUGCU-UCUGGGUCGGGGUUUCGUGCG-U
AGCA--------GAGCAGC-UC----------CCU--CGCUGCGAUCUAUUGAAAGUCAG
CCCUUGACACAAG-CUUUUGU-C-----------
>Mus_musculus
---------------GACUCUUAGC-GGUGGAUC-ACUCGGC-UCGU-G---CGUCGAUG
AAGAACGCAG-CUAGCUGCGAGAAUUAAUGUGAAU--U---GCA--GGACA--CAUUGAU
CAUCGACACUUCGAACGCA-CU-UGC---GG----CCCCG-GGU---------UCC----
----UCC---C----G----G---GGCU-A-CGCC-UGU---CUGAGCGUCGCUU-----
----------------------------GCGCGAC-CUCA-GAUCAG-A-CG-UGGCGAC
CCGCUGAAUUUAANCAUAUUAGUCAGCG--GAGGAAAAGAAACUAA-CCAGGAUUCCCUC
AGU-AA-CGGCGAGUGAACAGGGA-A-GA-GCCCAGCGCCGAAUCCCCGCCGCGCG-UC-
GCGG---CGU--GGGAAAUGUGGCG--UA----------CG-GAAGACCC--ACUC----
---------------------CCCGGCGC-----------CG---CUCGUG--GGGGG--
CCC-------AAGUCC-UUCU---------------------------------------
----GAUCG-AGGCCC---AGCCCGUGGACGGUGUGAGGCCGGUA---------GCG---
G--CCCCCG---GC--GCGCC-GGGC----------------UCGGGUCUUCCCGGAGUC
GGGUUGCUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGU-CAAC-A-AGUACCGUAAGGGAAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUAAGAGG--U-AAACG-GGU
G---GGGU-CCGCGCAGU-------------------CCGCCCGGAG--GAUUCAACCC-
-GGCGGCGCGCGUCCGGCCGUGC-CGGUGGU-CCCGGCG-GAUCUUUCCCGCUCCCCGUU
CCUC-CCG-ACCCCUCCACCCGCGCGUCG---------UUCCCCUCUUCC-UCCCCGCG-
----UCCGG----CGCUCCGGCGG-----------------CG-GGCGCGGG----GGGU
GGUGUGGUGGUGGCGCGCGGGCGGGGCCGGGGGUGGGGUCGGCGGGGGACC-GCCCCCCG
--GCCG-GCGACCGGCCGCCGCC-----GGGCGCA-CUUCC---ACCG-UG--GCGGU--
------GCGCCGCGACCGGCUC--C-------------------GG------GA-CG---
---G------CC------------------GGGAAGGCCC--GGU--GGGGAAGGUGGC-
------UC----GG-------GG---------------------------GG--------
------GGCG------------------------GCG-CGUC--UCA--------GGGCG
C-----GCCGAACCACC----------------------UCACCCC--------------
----------GAGU-------GUUACAG-CCCUCCGGCCGCAGCUUUCG-CCGA--AUCC
--------CGGGGCCGAGGAAGCCAGAUACCCGUC----------------GCCGCGCUC
UCCCUCU-------------CCCC---------------------CCGUCC---------
------------------------------GCCUCCC-----------------------
------------------GGG-------------------------------------CG
GGCG----------------UGG------------------GGGU---------------
------------------------------------------------GGGGGC----CG
GGCCG-------CCCCUCCCACGGCGC-------GACCGCUCUCCCACCCC------CCU
C-----CGUCG-CCUCUCU--CGGGGC-CCGG--------------UGGGGGGC---G-G
GGCG----GACUGUC-------------CCCAGUG--CGC-CCC---GG-----GCGUCG
UC--------GCGCCGUC--GGGUCCCGGGG---GG--------ACCGUCGGUCACGCGU
CUCCC-----------------------GACGAAGCCGAGCGCACGGGGUCGGCGG----
--------CGAUGUCGGC--UACCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CGCGUGCGCGA-GUCAGGGGCUCG-------UCCG------AAAGCCGCCGUGGCGC
AAUGAAGG-UGAAGGGCCCCGCCC---GGGGGCCCGAGGUGG-GAUCCCGAGGCCUC---
--UC--------------------------CAGUCCGCCGA---------GGG-------
-------------------------------CGCACCACC-GGCCCGUC----UCGCCCG
-C--------------------CGCG----------------CCGGGGAGG-UG-GAGCA
----------------------CGAGCGUACGCGUUAG-GACCCGAAAGA-UGGUGAACU
AUGCCUGGGCAGGGCGAAGCCAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUCU----------------
--------------------------------------CGCUCUUUUUUUUUNCCGACGU
ACGCAGUUUUAUCCGGUAAAGCGAAUGAUUAGA-GGUCUUGG-GGC-C-GAAAC-GAUC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCG--U--GGA-----------------
----GC---CGGG-C---GUGGA-AU-G--C-----GAGUGCCU-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUUGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGCCGGCAGUCGGAACGGAACGGGACGGGAGCGGCCGCGGGUGC
UCGUCUCU-----------------------------UGGGGUCUG----------GGGG
GCGUGGC------GGGGGCCCGUCCC-CCGCCUCC--CCU---CCGCGCGCCGGGUUUCG
CCCCCGCGGCGUCGG--GCCCCGC---------------------GGACGCUACGCCGCG
AC-G-GUAGGAGGGCCGCUGCGG-U-GAGCCUU-GAAGCCUA-G-GGCGCGGGCC--C-G
GGUGGAGCCG-CCG-CAGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AACUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUGAGAGAUGGGCG-A-G-UGCC----GU
UCCGA--------AGGGACGGGCG----AUGG---CCUC-----------------CGU-
--------------UGCCCUC------GGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAAUCCGGAGUGGCG---------GAGAUGGGCGCC-GCGA--------
---------------------------GGCGUCC--------AGUG-CGG---UAAC---
-----GC-GA---CC--------------------GAUC-CCGGA-GAAGCCGGCGGGAG
CC-CCGGGGAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCAG-----G-G
-----CG-----CC----------------CUGG-AAU-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GUGCC-UUG-GAA--AG---------
------------------------------------------------------------
CGUCGCGGUUCCGGCGGCGU-CCGGUGAG-CUCUCGCUGGC-CCUUGAAA-A-UCCGGGG
GAGAGG-------------------------------------------GUGUAAAUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCAU-
GUUGGA-ACAAUGUAG-GUAAGGGAAGUCGGC-AAGCCGGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGCUG-GGUCGGUC------GGGCUG--GGG-CGCGAA-GC
--GGG-GCUGGGCGCGCGCCGCG---GCUGGACGAGGC-GCCG--CCGCC-CUCUCCCAC
GUCCGG-GGAGACCC-CCCGUCCU--UUCCGCCCGGGCCC-----GCCC--UCCCCUC-U
UCCCCGCGGGG-------CCCCG--UCGUCCCCCGCGUC----GUCGC--------CACC
UCUCU-----------------------------UCCCC---------------------
-----CCCUCCUUCUUCCCGUCGGGG--------------GGC------GGGU-------
-------------CGG--GGGUC-GGCGCGC--GGCGCGGG-----CUCCGGGGC-----
--G--GC-GGGUCCAACCCCGCGGGG---GUUCCGGAGCGG--GA----GGAACCAGCGG
GCCCCCGGU----GGGGCGGGGG-GCCCGG-ACACUCGGGGGGG-CCGGCG-G-CGGCGG
CGACUCUGGACGCGAG-CCGG-GCCCUUC-------------------------------
------CCG----UGGAUCGC-----CU-CAGCUGCG-GCGGGCGUCGCG-GCCGCUCCC
GGGGAGC--CCGGCGGGUGCCGGC--G--------------------------CGGGUCC
CCUC-CCCGCG------GGGCC-UCGCUCCA------------------------CCCCC
------CCA----------UCGC--CUCUCC------CGAGGUGCGU----------GGC
GGGG---GCGG-GCGGGCGUC---------CCGCGCGUGUGGGGGGAACCUCC-------
-----------GCGUCGGUGUUC--CCCCGCCGGGUCCGCCCCCCGGGCCGCGGUUUUCC
GCGCGGCGCCUCGCCU----CGGCCG-GCG--CCUAGCAGC--CGACUUAGA--ACUGGU
GCGGACCAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCG--
--CG-G------------CGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACC----UAC-UA
UCCAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGGCACGGUGAAGAGACAUGAGAGGUGUAGAAU-AAGU
GGGAGGCCCCC--GGCGCCCG-----------GCCCCGUCCUC----------GCGU---
--------------------CGGGGUCGGGGCACGCCGGCCUCGCGGGCC-GC-CGGUGA
AAUA-CCACUACUCUCAUCGUUUUUUCACUGACCC-GG-------U-GAGGCGGG----G
GG-----------GC-------GA--GCCC--------CGAG-GGGCU-CU-CGCUUCU-
-------------------------GGCG-------------------------------
-------CCAA--GCGU------------------C------------------------
--------------------CGU---------CCCG------------CGC--------G
UGCGGG-----CGG----------------------------------GCG------CGA
------------------------------CCCG----CU--------------------
--------------------------------------CCGGGGACA-GUGCCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCA-AACGGUAAC-GCAGGUGUCCUAAGGCGAGCU
CAGGGAGGACAGAAACCUCCCGUG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUACGAAUACAGACCGUG
AAA-GCGGGGCCUCACGAUCCUUC-----------UGA---CCUUUUGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AU--GUGUUGUUGC
CAUGGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUU-UGGUGUAUGU
GCUUGGCU-GAGG-AGCCAA-U-GGGGCGAAGCUACCAUCUG-UGGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCCGCCCAG-----GCGGAACGAUACGGCAGCGCCG-----
--------------------------AAGGAGCCUCGGUUGGCCCCG----------GAU
AGCCGGGUCCCCGUCCGUCCC----------------------------CGCUC---GGC
GGGGUCC--CCGCGUCGUCCCCGCGGCGGCGCGGGGUCUCCCCCCG--CC--GG--GCGU
CGGGACCGGGGUCCGGUGCGGAG---AGCCGUUCGU--CUU--GGGAAACGGG-----GU
G--CGGCCGGAAAGGGGGCCGCCCUCU----CGCCCGUCACGUU---GAACGCACGUU--
--------CG-----------------UGUGGAA---------------------CCUGG
CGCU-----AAA----CCAUUCGUAGACGACCUGCU-UCUGGGUCGGGGUUUCGUACG-U
AGCA--------GAGCAGC-UC----------CCU--CGCUGCGAUCUAUUGAAAGUCAG
CCCUCGACACAAG-GGUUUGUCU-----------
>Oryza_sativa
--------CACA--CGACUCUCGGC-AACGGAUA-UCUCGGC-UCUC-G---CAUCGAUG
AAGAACGUAG-CGAAAUGCGAUACCUGGUGUGAAU--U---GCA--GAAUCC-CGUGAAC
CAUCGAGUCUUUGAACGCAAGU-UGC---GC----CCGAG-GCC--------AUCC----
----GGC---C----G----A---GGGC-A-CGCC-UGC---CUGGGCGUCAC-------
------------------------------GCGAC-CCCA-GGUCAG-G-CG-GGACUAC
CCGCUGAGUUUAAGCAUAUAAAUAAGCG--GAGGAGAAGAAACUUA-CGAGGAUUCCCCU
AGU-AA-CGGCGAGCGAACCGGGA-G-AU-GCCCAGCUUGAGAAUCGGGCGGCC------
GCGC---CGU--CCGAAUUGUAGUC--UG----------GA-GAGGCGU------C----
---------------------CUCAGCGA-----------CG---GA------CCGGG--
CCC-------AAGUCC-CCUG---------------------------------------
----GAAAG-GGGCG-------CCUGGGAGGGUGAGAGCCCCGUC---------CGG---
C--CCGGAC---CC--UGUCG-CCCCACG-------------AGGCGCCGUCAACGAGUC
GGGUUGUUUG---GGAAUGCAGCCCAAA-U-CGGGCGGUAAA-CUCCGUCCAAGGCUAAA
UACAGG--C-GAGAGACCGAUAGC-GAAC-A-AGUACCGCGAGGGAAAG-AUGAAA-AGG
AC-UUUGA-AAAGAG-A-GUCAAAGAGUGCUUGAAAUUGCCGGGAGG--G-AAGCG-GAU
G---GGGG-CCG-GCGAU-------------------GCGCCCCGG----------CCG-
-UAUG-------------------CGG----------------------------A----
---------ACGGCU---------------------------------------------
------------------------------------------------------------
--------------------------UCGGCUG----------------------GUCCG
-----------------CCGAUC-----GGC-------------UCGG--G--GCGU---
------------GGACUGUUGU--C-------------------GG------CC-GC---
---G------CCG--------GCG-GCCAAAGCC--------------------------
------CG----GG-------GG-------------------------------------
--------CU-------------------C---C--------------------------
------GCGC--------------------------------CCCC--------------
----------GGC-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------AGCCG-------
-----------------UCGUCGGCGC-------AGCCGGUC------------------
---------------------------------------------------ACC-----G
CGCG------CC----------------UCUGGCG--CGC-CCCUCGGG-------G-CG
CU--------GCGCCGCA----A-------------------------------------
--------------------------------------------------CGGCCU----
------------GCGGGC--UCCCAUCCGACCCGUCUUGAAACACGGACCAAGGAGUCUG
-A-CAUGCGUGCGA-GUCGACGGGUU-------CUGAA-------ACCUGGGA--UGCGC
AAGGAAGC-UGACG-----------------------AGCGG-GAGGCCC----------
------------------------------------UCACG---------GGC-------
-------------------------------CGCACCGCU-GGCCGACC----CU-GAUC
----------------------UUCU-----------------GUGAAGGGUUC-GAGUU
----------------------GGAGCACGCCUGUCGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAGCGGGGCGAAGCCAGAGGAAAC-UCUGGUGGAGGCUCGA--AGCGAUACUGA
CGUGCAAAUCGUUCGUCUGACUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGAG-CCCA----------------
-----------------------------------------------------------U
UACGAGUUCUAUCGGGUAAAGCCAAUGAUUAGA-GGCAUCGG-GGG-C-GCAAC-GCCC-
U-CGACCUAUUCUCAAACUUUAAAUAGGUAGGAC--------------------------
---------------GGCGC-GGCUG-CU--CCGG--U--GAG-----------------
----CC---GCGC-C---ACGGA-AU-C--GG----GAGCUCCA-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGC-GGGAUG---AACCGGAAGCCU-GGUUACGGUGC
CGAACU--GC-GCG-CU-AA---CCUAGAACCC-ACAAAGGGUGUUGGUCGAUUAAGACA
GCAGGACGGUGGUCAUGGAAGUCGAAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCCGAAAAU-GGAU-GGCGCUGA-AGCGCGC----------GA
CCCAC-ACCAGGCCAUCUGGGCGAG-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------CGCCAUGCCCCG
AU-GAGUAGGAGGGC-GCGGCGG-C-C-GCCGC-AAAACCCG-G-GGCGCGAGCC--C-G
GGCGGAGCGG-CCG-UCGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GGCCGAAGAGGAG-AAAGGUUCC-AUGUGA
ACGGCACUUGCACAUGGGUAAGCCGA--UC-CUAAGGGACGGGGU-A-A-CCCC----GG
CAGAG--------A-------GCG-----CGA----------------------------
-------------CCACGCGC-------GUG----CC-CC-GA-A-AGGGA-AUCGGGUU
-AAGAUUUCCCGAGCCGGGA---CGUG------GCG--------GUU-------------
--------------------------------------------GA-CGG---CGAC---
-----GU-UA---GG--------------------AAGU-CCGGA-GACGCCGGCGGGGG
CC-UCGGGAAGA-GU------UAUCU-----U-UUCUGC-UUAACG-GCC-C-----G-C
----CAA-----CC----------------CUGG-AAA-C-GG-----------------
---UUCAG-CCGGAGGUAG-----GGUCCA----GCGGC-CGG-AAG--AG---------
------------------------------------------------------------
CACCGCACGUCGCGCGGUGU-CCGGUGCG-CCCCCGGCGGC-CCUUGAAA-A-UCCGGAG
GACCGA---------------------------------------------GUACCGUCC
A-CGCCCGGUCGUACUCAUAACCGCAUCAGGUC-UCCAAGGU-GAACAGCCUCUGGC-C-
AAUGGA-ACAAUGUAG-GCAAGGGAAGUCGGC-AAAACGGAUCCGUAACUUCGG-GAAAA
GGAUUG-GCUC-U-GA--GGGCUG-GGCUCGGG------GGUCCC--GGC-CCCGAA-CC
--CGU----CGGC------UGCC---GG------------CGG--AC-------------
--------------------------------------------------------UG-C
UC-------G--------AGCU--------------------------------------
------------------------------------------------------------
-------GC-----------UCGCGC--------------G-------------------
--------------GCGAGA----------------------------------------
-------------------------------------GCGGG------------------
----------------------------------------------------C-CG----
-----------CC--G-CGU--GCCG-GC-------------------------------
------CGG----GGGA-CGGA----CC-GGGAAC-------------------------
------------------------------------------------------------
------------------GGCC--------------------------------------
-------------------------CCCUC------------------------------
GGGG---G----------------------------------------------------
------------------------------------------CC----------------
-------UU-----------CCCCGG-GCG--UCGAACAGC--CGACUCAGA--ACUGGU
ACGGACAAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUUGCGAUGGUCCU--
--CG-CGGAUGCUGACGCAAGUGAUUC-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAACCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUGUC----UAC-UA
UCCAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCCGACUUUGUGAAAUGACUUGAGAGGUGUAGGAU-AAGU
GGGAGCC----------------------------------------------CUCG---
-----------------------------------------------GGC-GC-AAGUGA
AAUA-CCACUACUUUUAACGUUAUUUUACUUAUUC-CG-------U-GAGUCGGA-----
-A-----------GC-------GG--GGCC--------UGG---CCCC-U--C-CUUUU-
-------------------------GGCU-------------------------------
-------CUAA--GGCC-------------------------------------------
--------------------CG----------AGU-------------------------
--CCCU-----CG-----------------------------------GGC------CGA
------------------------------UCCG----GG--------------------
--------------------------------------CGGAAGACA-UUGUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGUUA-AAAGAUAAC-GCAGGUGUCCUAAGAUGAGCU
CAACGAGAACAGAAAUCUCGUGUG-GAACA-AAAGGGUAA-AAGCUCGUUUGAUU-CUGA
----------------------------------UUUCCA--GUACGAAUACGAACCGUG
AAA-GCGUGGCCUAUCGAUCCUUU-----------AGA---CCUUCGGAG----------
----------UUUGAAGCUAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGCGUUCAUAGCGACGUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGUGUUGGAUUGUUCACCCACCAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG---------------------------------------A---CCGUGCCGC
GAUAGU-AAU-UCAACCUAGUACGAGAGGAA-CCGUUGAUUCACACAAU-UGGUCAUCGC
GCUUGGUU-GAAA-AGCCAG-U-GGCGCGAAGCUACCGUGUG-CCGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCAAGCUAGC----AAGCGGCGCC-UGCGCCCGCCG-----
---------------------------CCCGC-----CCCGACCCAC----------GUU
AGGGG-----CU---------------------------------------------AGG
GGC-----GCAA------------------------------------GC--CC--CCA-
--------AGGGCCCGUGCCACC----GGCCAAGCC------GGCC---CGGC-----CG
A--CGCG---------CCGCGGCCGGC----CGCCU-CGA--------AGCUCC-CUU--
--------CC-----------------CAACGGG---------------------CGGCG
GGCU-----GAA----UCCUUUGCAGACGACUUAAA-UACGCGACGGGGCAUUGUAAG-U
GGCA--------GAGUGGC-CU----------UGC--UGCCACGAUCCACUGAGAUCCAG
CCCCGCGUCGCACGGAUUCGUCC-----------
>Pan_troglodytes
--------------UGACUUUUAGC-GGUGGAUC-ACUUGGC-UCCU-G---CGUUGAUG
AAGAAUGCAG-CUAGCUGUGAGAAUUAAUGUGAAU--U---GCA--GGACA--CAUUGAU
CAUCGACACUUCGAACGCA-CU-UGC---GG-----CCCG-GGU---------UCC----
----UCC---C----A----G---GGCU-A-UGCC-UGU---CUGAGCUUUCCUU-----
----------------------------GCGUGAC-AUCA-GAUCAG-A-CG-UGGUGAU
CCAUUGAAUUUAAGCGUAUUAGUGAGCG--GAGGAAAAGAGACCAA-CCAGGAUUCCCUU
AGU-AA-CAGUGAGUGAAGAGGGA-A-GA-GCCCAGUGCUGAAUCCCUGCCUUGUG-GU-
GGGG---UGU--GGGAAAUGUUGCA--UA----------UG-GAAGGCCC--UGUC----
---------------------CCCGGCAC-----------CG---CUGGUG--GGUGG--
CCC-------AAGUCC----U---------------------------------------
----GAUCU-AGGCCA---AGACUGUUGGUGGUGUGAGGCUGGUA---------GCC---
A--CCCCUG---GC--GCGCU-GGGC----------------CCGGGUCUUCCUGGAGUU
GGGUUGCUUG---GGAAUGCAGACCAAA-G-GGGGUGGUAAA----CAUCUAAGACUAAA
UACUGA--C-ACGAGAGCGAUAGU-CAAC-A-AGUACCGUAAGGGAAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUAAGAGG--U-AAACG-GGU
G---GGGU-CCGCGCAGU-------------------CCGCCCGGAG--GAUUCAACCC-
-GGCGGCG--GGUCCGGCCGUGU-CGGCGG--CCCGGCG-GAUCUUUCCCGCCCCCCGUU
CCUC-CCG-ACCCCUCCACCCGCCC--------------UCCCUUCCCCC-CGCCGCCC-
--CUCCUCC----UCCUCCCCGG------------------AG-GGGGCGGGCUCCGGCG
GGU---GCGGGGGUGGGCGGGCGGGGCCGGGGGUGGGGUCGGCGGGGGACC-GUCCCCCG
--ACCG-GCGACCGGCCGCCGCC-----GGGCGCA-UUUCC---ACCG-CG--GCGGU--
------GCGCCGCGACCGGCUC--C-------------------GG------GA-CG---
---G------CU------------------GGGAAGGCCC--GGC--GGGGAAGGUGGCU
---CGGGG----GGCCCCGUCCGUCC---------UCCUCCUCCCCCCCCGU-CUCCG--
CCCCCCGGCC------------------------CCG-CGUC--CUCCCCCGGGAGGGCG
CGCGGGUCGGGGCGGUGGCGGCGGCGGC---GGCGGUGGCGGCGGU----GGCGGCGGGA
CCGAAACCCCCCCCGA---GUGUUACAG-CCCCCCGGCAGCAGCACUCG-CCGA--AUCC
--------CGGGGCCGAGGGAGC--GAGACCCGUC----------------GCCGCGCUC
UCCCCCCU--------CCCGGCGCC------------------CACCCCCGCGGGGA---
-----------------------------UAUCCUCCG----------------------
-------------CGAGGGGGGUC----------------------UCC-----CCCGCG
GGGG---CG-----------CGC------------------CGGC--------------G
UCUCC-------------------------------------UCGUGGGGGGGC----CG
GGCCA-------CCCCUCCCACGGCGC-------GACCGCUCUCCCACCCCUCCUCCCCG
CAACCCCCCUC-UCCCGGCGACGGGGA--GGG--CCGCGCGCGGGUCGGGGGGC---G-G
GGCG----GACUGUC-------------CCCAGUG--CGC-CCC---GG-----GCG-GG
UC--------GCGCCGUC--GGGCCCGGGGG---AGGUUCUCUCGGGGCCACGCGCGCGU
CCCCC-----------GAAGAGGGGGACGGCGGAGCCGAGCGCACGGGGUCGGCGG----
--------CGAUGUCGGC--CACCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CACGUGCGCGA-GUCGGGGGCUCG-------CACG------AAAGCCGCCGUGGCGC
AAUGAAGG-UGAAGGCCGGCGCGCU--CGCCGGCCGAGGUGG-GAUCCGAGGCCUC----
--UC--------------------------CAGUCCGCCGA---------GGG-------
-------------------------------CGCACCACC-GGCCCGUC----UCGCCCG
-C--------------------CGCG----------------CCGGGGAGG-UG-GAGCA
----------------------CGAGCGCACGUGUUAG-GACCCGAAAGA-UGGUGAACU
AUGCCUGGGCAGGGC-AAGCCAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUCU----------------
------------------------------------CGCAGACCCGACGCACACCCCCCC
ACGCAGUUUUAUCCGGUAAAGCGAAUGAUUAGA-GGUCUUGG-GGC-C-GAAAC-GAUC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCG--U--GGA-----------------
----GC---CGGG-----GUGGA-AU-G--C-----GAGUGCCU-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUUGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGCCGGCAGUCGAGAGUGGACGGG-----AGCGGCGGGGGCGGC
GCGGGCGUGUGCGCGCGCGCGUGUGUGCGUGUGUGUCGGAGGGCGGCGGCGGU---GGCG
GCGGGGG-----UGGGGUCCUCCCCCUCCCCCACG--CCG---CCUCCCCUCCUCCCACC
CACCACCGCCGCCGCCACCCCCGCUCCCCGCCCCCGGAGCCCCGCGGACGCUACGCCGCG
AC-GAGUAGGAGGGCCGCUGCGG-U-GAGCCUU-GAAGCCUA-G-GGCGCGGGCC--C-G
GGUGGAGCCG-CCG-CAGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AACUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUGAGAGAUGGGCG-A-G-CGCC----GU
UCCGA--------AGGGACGGGCG----AUGG---CCUC-----------------CGU-
--------------UGCCCUC------GGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAAUCCGGAGUGGCG---------GAGAUGGGCGCC-GCGA--------
---------------------------GGCGUCC--------AGUG-CGG---UAAC---
-----GC-GA---CC--------------------GAUC-CCGGA-GAAGCCGGCGGGAG
CC-CCGGGGAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCAG-----G-G
-----CG-----CC----------------CUGG-AAU-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GUGCC-UUG-GAA--AG---------
------------------------------------------------------------
CGUCGCGGUUCCGGCGGCGU-CCGGUGAG-CUCUCGCUGGC-CCUUGAAA-A-UCCGGGG
GAGAGG-------------------------------------------GUGUAAAUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCAU-
GUUGGA-ACAAUGUAG-GUAAGGGAAGUCGGC-AAGCCGGAUCCGUAACUUCGG-GAUAA
GUAUUG-GCUG-U-AA--GGGCUG-GGUCGGUU------GGGCUG--GGU--------GC
--AUG----CCAC------CACU---GGAAGA---GGC-CCUG--CAGCG-CCCCC--AU
GCCCCA-GGG-AUG--CCUGUCGUGGCCCUCCUCUGCCCCAACCCGCGUG-CUGCUCG-C
UCCCUCCCC---------UGCCC--CCUCU-----------------------------C
UCCCUG------------------------------------------------------
-----UCCUCCCCCUC--U-CUGGAGGU------------GGC------GUG--------
-------------UGG--GGG----------------CAGA---------GGGGU-----
--G--GC-GGUGGCCAUACGGCCCCG-----------GUGG--CA----GG-----GCA-
-----UGAUCUCCCGUGAGGGGG-GGCU-------------------GGUG-G-UGGUGG
UGACUCUGGACCCGAG-CCGG-GCCCUUCCCAUGGAUUGCCC-----------CAGUU--
-----GUGG----CCGCCCAU-----GGGGAGCC-CA-GUGGGUGCUG---GCGUGUCCU
GUCUUGC-UCCGUG-----CUGUCAUGCGUUUCAGCGCGGGCAGGGAGUGAUUGGGUGUC
G-----GUGGGU------GGUGGGCGGGGUGGUUCAUUCCCCCACCUCCCCCGCGGCCCC
AUCUGUCUCG--UG----UCCCC--CCCUCC---------------------------GU
GGAG---G----------------------UGGCG-----GGCC----------------
-----------ACGGGCUGGUCC-CCACCACCGGG-------GCGG-----CGGUU----
---CCGUGCAGCGCCU----UGGCCG-GUG--CUUAGCAGU--CGACUUAUAGAACUGGU
GUGCACCAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCU--
--CG-G------------GGGGUGUU----GCAAAGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAAUGAA--------------GAAA--------------UUCAAUGAAGUAU--
GGGUAAAU-GGCAGAAGUAACUAUGGCUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
ACUAAUGACGUGCAUGAAUGGAUGAAUGAGA--UUCCCACUGUCCCUACCUACUUAC-UA
UCCAGUGAAACC-ACAGCCAAGGGAAUGGGGUUGGUGGAAUCACUGGGGAAAGAAGA-AC
CUGUUGAGC-UUGACUGUAGUCUGGCAUGGUGAAGAGACAUGAGAGGUGUAGAAU-AAGU
GGGAGGUCCCC--GGUGCCC-------------CCUAUCCCU-----------GUGA---
-------------------GGGGGUGGGGUGG-----GGUCCUGUGGGCU-GC-CCAUGG
AAUA-CUACUACUAUGAUCAUUUUUUCACUGACCU-GA-------U-GAGGCAGG-----
GG-----------GU-------GA--GCCC--------CAAG-AGGCU-CU-CCCUUCU-
-------------------------GGCG-------------------------------
-------CUAA--GUGC------------------C------------------------
--------------------CA----------GAUG------------CAU---------
GCUGGC-----CGG----------------------------------GUGU-----UGA
------------------------------CCCA----UU--------------------
--------------------------------------CCGAGGACA-GUGCCAGGUGGG
GAGUUUGACUGGGGCAGUACACCUGUCG-AACAGUAAU-ACAGGUGUCCUAAGGCGAGCU
CAGGGAGGACAGAAACCUCUUGUG-GAGCA-GAAGGACAA-AAGCUCGCUUGAUC-GUGA
----------------------------------UUUUCA--GUGCGAACACAGACUG-A
AAG-CCGGGCUUUGACGAUCAUUC-----------UGA---CGU----------------
----------UUUUAAGCAGGAGCUGUCAG-AG--AAGUUACCACGGGG-AUAACUGGCU
CGUUGUGGCCAAGCGUUCAUAGGGAUGUUGCUUUUUGAUCCUUUGAUGUUGGUUCUUCCU
AUCAUUGUGAAGUAGAAUUCACCAAGCAUUGGAUUGUUCACCCACUAAUGGGGCAUGUGA
GCUGGAUUUAGACCUUCGUGAGACAGGUUAGUUUUACCCUCCG-----------------
---U-GAU--------------------------------------GU--GUGUUGUUGC
CAUGGU-AAU-CCUGCUCAGCAUGAGAGGAA-CCACAGGUUCAGAC----------AUGU
GCUUGGUU-GAGG-AGCCAA-U-GGGGUGAAGCUACAGUCUG-UUGGAUUGUGACUGAAC
GCC-UC--UAAGUCAGAAUCCCGCCCAA-----GAGGAAGGAUACAGCAGCGCCG-----
---------------------------UGGAGCCUUGGUUGGCCUUGGCUGGCCUUGGCU
AGCCGGUUCCCCGCCCCCGCUGGU-------------------------GGGCU---GCC
UCG---C--CCUGGGUGGGGU-------GUG----------CCCCA--CC--AU--GUGC
CAGGACU-GCGUCCGGUGCAGAG---UGCCCUUCUU--CCU--GGGAA---GG-----GU
G--UGGCAGAAAA---GGCGGCCUCCU----UGCCUGUCACGC-----AACACACGUU--
--------CG-----------------UGGGGAA---------------------CCUGG
UGCU-----AAA----CCAUUGGUAGACGACCUGCU-UCCGGGUUGGAGUUUCAUAAG-U
AGCA--------GGGCAGC-UC----------CCU--UGCUGUGAUCUAUUGAAAGUCAG
CCCUUGACACAAG-GGUUUGU-C-----------
>Plasmodium_falciparum
--------UAGC--ACAGUCUUAAC-GAUGGAUG-UCUUGGU-UCCU-A---CAGCGAUG
AAGGCCGCAG-CAAAAUGCGAUACGCAAUGAAAAU--U---GCA--GUGAC--UGUGAAU
CAUCAGAAUGCUGAAUGUAAAC-UAC---AC----CAAUU-C-----------CUU----
------C---G----G----G---GAAU-A-GUGG-UAC---UCCUACAGAAAAU-----
----------------------------GUUUGAU-UUGA-UGUUAG-G-AG-GGCAAAU
CCGCCGAAUUUAAGCAUAUAAUUAAGCG--GAAGAAAAGAAAAUAA-CUAUGAUUCCUUU
AGU-AA-CGGCGAGUGAACAAGGA-C-CA-GCUCAAACGGUUAAUCCUUCGUUUGGUGCA
AACCUUUCGA--CGGAAUUGUCGU----------------U-GAAUUA-------U----
---------------------UCCAUGAA-----------UG---CCUUUAA-UUUGA--
GCA-------AAGUGA-GCAG---------------------------------------
----GAAUG-CUUCC-------CCAUAGAGGGUGAAAGGCCCAUA---------GUU---
C--UUUUUAA-UUU--AUUCA-UUGGA----------------AUUUUUCAUGCCGAGUC
GUGUUCUUUG---AGAUUGGAGCACUAAUA-CGUGUGAUACA-UUUCACAUAAAGCUAAA
UAUGUG--U-AGGAGACCGAUAGC-AAAC-A-AGUACCGUGAGGGAAAG-AUGAAAUAGU
AC-UCAGG-AAUGAGCA-AUUAAAUAGUACCUGAAAUCGUUAAGAUG--G-AACGG-AUU
A---AGAG-AGA-AAA-----------C--------AAGUAAAGAGG--GG---------
-AAUUUU-----------------------------------------------------
----------UAAU----UUUUU-------------------------------------
------------------------------------------------------------
---------------------------UUGUUA---------------------------
----------------UAAUUCU---------------CUU---CUUU--A--UUA----
------------AAAGAAACAU--C-------------------AG------UG-AU---
--UA------AUU-----------------UAAUU--------------------UCAA-
------UA----AA-------GCAAUC----------------CCCUGAAAUU-------
CAA---AAUUUCUUUUAAUUUUCUUUUCACUUUCUCCCCGCA--CUAA-------UGUGG
G-----GAAA----------------------------ACUGGCUU--------------
----------UAUU---------------UC-------------UUCAA-UUA---UUUU
--------UUUUGCU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GAGGAA------
-----------------UUUUAAAAUU-------AUU-----------------------
------------------------------------------------------------
--UG----AAUUUU-----------------------UCU-UCUU---------------
AU--------AAUUUAAGU-----------------------------------------
-----------------------------------------------UGUUUCUAU----
-----------AUAGUAC-UUUCUAACCCACUCGUCUUGAAACACGGACCAAGGAGUCUA
-G-CAAAUGUGCAA-GUGUAUAUGAUUCUUUAAACAUUUCUCUUUUUAAUAUA--CGCAU
AAUUAAUG-UAAUAUGUUUCUUU------AUUGUAGAUUUGU-GUGGUGUUUAAUUU---
------------------------------------UUAUU---------AAAUC-----
-------------------------------CCCACUUUG-CAUACAUC----CG-GUAA
-G--------------------CAAU----------------UAUGCUUUA-UU-GAGUA
----------------------CGAGCAUAUUUGGUAG-GACCCGAGAGG-CUUUGAACU
AAGCGUGAUGAGAUUGAAGUCAGACGAAAG-UCUGAUGGAGGAUCGA--GUUGAUACUGA
CGUGCAAAUCGUUCAUUUCAAUCACGUUUAGGGGCGAAAGACUAAUCGAAAAGCC-UAUU
AGCUGGUUAUUUUCGAAAGAUCUCUCAGGAUCGCUGGAG-UUGA----------------
--------------------------------------------------------AUUA
AUAUAAUUUUACCAGGUAGAGAUAAUGAUUAGA-GGAAUCAG-GGA-A-AUCGU-UUUCC
U-UGACCUAUUCUCAAACUCCCAAUAGGUAAAAA--------------------------
---------------GGGCG-AAAUAACU--CAAC--UU-GUAUU---------------
----UC--ACUCA-U---AUUAA-AU-A--AAA---UAACUCCA-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGA-GGGAUG---CUCCUAACGCUU-GGAUAAGGUGC
CUAAAU--AU-UCG-CU-CA---UG-AGAUCCC-AUAAAAGGUGUUGGUUCAUAAUGACA
GUAGGACGGUGGUCAUGGAAGUCGAAA-UCCGCUAAGGAGUGUGUAACAACUCACCUACC
-----GAAUGAACUAGCCCUGAAAAU-GGAU-GGCGCUAA-AGCGGAU----------UA
CCGAU-ACCAAGCCAUAAAAAGAA------------------------------------
--------------------------------------------CA--------------
----GAA------AAAAUUUA------UUUUUU---------------------------
---------------------------------------------UUUUAGAAUCUUUUU
AU-GAGUAGAAAAUC-GUGGGGU-U-U-GUGUU-GAAGCGAA-A-UACGUGAGUU--U-U
CGUGGAACAUCUCC-CUAGUGCAGAUCU-UGGUGG-AAGUA-GCAACU--AUUCAAAAUG
A--G---------------AACUUU-GAA-GACUGAAGUGGAG-AAGGGUUUC-UUGUCA
ACUGUGAUUGAACAAGAGUUAGCCGC--UC-CUAAGGGAUAGCUG-A-A-AAGU----GU
UUAAA--------AG------GGG-----GUU----------------------------
--------------CCUUCCC--------CG----UC-UC-AA-A-AGGGA-AACAGGUU
-GAUA-UUCCUGUGCCAAUA---GUAU------UAUGAGUUU--CUU-------------
-------------------------------------------AGA-UGG---UAACAUA
U--AUAU-AA---AU--------------------GAAC-UCCUU-UACAUAGGCUUUAC
AC-UCGGGGUGC-GU------UUUCU-----U-UGCACU-UUACCU-UUAUA-----A-C
----AAA-----CC----------------UUGG-AAU-C-AA-----------------
---UUUAC-UUGGAGAAGA-----GGUUCG----UUGAA-CUC-AAU--UCAAAAAAUUU
CUUGAACGGGGUUUUCGGAUUCAGUUCAUUUUAUUUUUUGUUUUGUAGCAAUAG-----U
AAUUCGUUUUUAUGAAUUAU-CCGAAGUG-GUAAGGACUAU-CCUUGAAA-A-AAGGAGG
GAACGGCUUUGUAAACUUGGUUUCUUCUGAUUCCAUUUUGCUUUGCUAUACUCUUAAUAC
U-UGUAUGAGCGUACCAACAACCGCAUCAGGUC-UCCAAGGU-UAACAGCCUCUGGU-UA
AAUAGA-AAAAAGUAG-GUAAGGGAAGUCGGCAAAAAUAGAUCCGUAACUUCGG-GAAAA
GGAUUG-GCUC-U-GA--GGACAUUAGAAAAGA------GAAGA---AAA--------AA
--AGA----GGGU------CGAA---AAUAAA---AUU-GCAG--UC-------------
--------------------------------------------------------UU-A
UU----------------UGCUU-------------------------------------
------------------------------------------------------------
-------UUCUUUC----------GAUU-----------UGCU-----------------
-------------UGU--AAU---------------------------------------
-------------------------------------CUGCU-U----------------
----------------------------------------------------U-UU----
---CU------UU--U-UCUU-CUUU-CU-------------------------------
------UUU----U----UUCUCCCCCUCUUUUCGCCUUCA--C----------------
------------------------------------------------------------
------------------UUUA--------------------------------------
------------------UUGUA--AUUUU------------------------------
-AUU---A----------------------------------------------------
------------------------------------------CU----------------
-------UU-----------AAUUUG-AUAC-CUAUAAUGU--UAACUCAGA--ACUGAA
ACGGACAAGGGGAAUCCGA-----CUGUUUAAUUAAAACAUAGCAUUGUGAAAAGCCA--
--CA-A------------CUGGUAUUA-ACACAAUGUGA-UUUCUGCCCAGUGCUUUG-A
AUGUCAACUUGAU--------------GAAA--------------UUCAAUCAAGCGC--
AGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUACU----UGC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAAAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUUACUCUAGUCUGGCUUUGUGAAACGACUUAAGAGGUGUAGCAU-AAGU
GGGAGUAG------AAAC----------------------------------UGAAAUAU
------------------------------------------GUUUUUAC-GA-CAGUGA
AAUA-CCACUACUUUUAAAGUUGUUUUACUUAUCC-AU-------U-UAUAGGGA----A
AU-----------AUAU----UAU--GCUUU-AUCCUUCGGGAAGGCA-UUCUGAUAUU-
-AUUU-------------------GAAUU-------------------------------
-------UUUA--AGAA-------------------------------------------
--------------------------------ACU-------------------------
--UGUU-----UC-----------------------------------UUAU---UUUUC
------------------------------UCCCAUUUCU--------------------
--------------------------------------AUGGAGACA-UAGCCAGGUGGG
GAGUUUGACUGGGGCGGUACAUCUGUUA-AAUAUUAAC-GCAGAUGUCCAAAGACAAGCU
CAAAGAGAACAGAAAUCUCUUGUA-GACUA-AAAGGGGAA-AAGCUUGUUUGAUU-UCUA
----------------------------------UUUUCA--GAACAAGUAGAAAACGUG
AAA-GCGUGGCCUAUCGAUCCUUU-----------AUA---UUUGCAAAAUGACGUAAAU
UACUUACUACUGUGCAUAUAGAGGUGUCUG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCUGCCAAGCGCUCCUAGCGACGUAGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGGGACGCAGAAGUCUCAAAGUGUCGGAUUGUUCACCCGCUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUGAAUUU------------UAUUAUAUUUUUUAUAUAUACAU--AUAGUAUUGU
GACAGU-AAU-CCAACUUGGUACGAGAGGAU-UAGUUGGUUCAGACAAU-UGGUAC-AGC
AAUUGGUU-GACA-AACCAG-U-GUUGCGAACGUA-AGUCUG-UUGGAUAAUGGCUGAAC
GCC-UCU-UAAGCCAGAAACCAUGCUGAUU---AAACAAUACU-AUUUCGUUCUU-----
---------------------------UUUUGUUUCCUUUUUUACUGC------UAAUGU
AAAAGA----------------------------------------GAAAUUAU---AUA
UGU------------ACCUUU--------------------UUUUG--GU--AC--AU--
----------AAAUAAU-----------CCUAUCAC---CUUUUUCG--UGAG-----CU
G--UGAGCUG----UGAGCUAGGCAAU----AGUUC-------------------UUU--
----------A----------------ACAACAA---------------------AAAAG
AAUU-----GCA----CAAACUGUAGACGACUUU---UUUGCCUCAGGGUGCUGUAAA-C
AUGA--------AAGUAAA-CU----------UUG--UUUUACGAUCUGUUGAGGCUUAU
CCCUAGUGGUAA--AGUGUU--U-----------
>Rattus_norvegicus
--------------CGACUCUUAGC-GGUGGAUC-ACUCGGC-UCGU-G---CGUCGAUG
AAGAACGCAG-CUAGCUGCGAGAAUUAAUGUGAAU--U---GCA--GGACA--CAUUGAU
CAUCGACACUUCGAACGCA-CU-UGC---GG----CCCCG-GGU---------UCC----
----UCC---C----G----G---GGCU-A-CGCC-UGU---CUGAGCGUCGCU------
-----------------------------CGCGAC-CUCA-GAUCAG-A-CG-UGGCGAC
CCGCUGAAUUUAAGCAUAUUAGUCAGCG--GAGGAAAAGAAACUAA-CCAGGAUUCCCUC
AGU-AA-CGGCGAGUGAACAGGGA-A-GA-GCCCAGCGCCGAAUCCCCGCCGCGCG-CC-
GCGG---CGC--GGGAAAUGUGGCG--UA----------CG-GAAGACCC--ACUC----
---------------------CCCGGCGC-----------CG---CUCGUG--GGGGG--
CCC-------AAGUCC-UUCU---------------------------------------
----GAUCG-AGGCCC---AGCCCGUGGACGGUGUGAGGCCGGUA---------GCG---
G---CCCCG---GC--GCGCC-GGGC----------------CCGGGUCUUCCCGGAGUC
GGGUUGCUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGC-CAAC-A-AGUACCGUAAGGGAAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUAAGAGG--U-AAACG-GGU
G---GGGU-CCGCGCAGU-------------------CCGCCCGGAG--GAUUCAACCC-
-GGCGGCGC-GCGCCGGCCGG-C-CGGUGGU-CCCGGCG-GAUCUUUCCCGCUCCCCGUU
CCUC-CCG-ACCCCUCCACCCGCGCGUCUCUCUCCCCCCUCCCCGCGUCC-CGCCGUCGC
CGUCCCCGCUCCUCCCUCCGGGGGGGUGUCGGCGGGCGCUCCG-GCGGCGGG---CGCGG
GGUGUGGUGGGGGCGCGCGGGCGGGGCCGGGGGUGGGGUCGGCGGGGGACC--GCCCCCG
--GUCG-GCGACCGGCCGCCGCC-----GGGCGCA-CUUCC---ACCG-UG--GCGGU--
------GCGCCGCGACCGGCUC--C-------------------GG------GA-CG---
---G------CU------------------GGGAAGGCCC--GGC--GGGGAAGGUGGC-
------UC----GG-------GG---------------------------GG--------
------GGCG------------------------GCG-UCAC--CCG---------UGGG
C-----GCCGGACCACC----------------------CCGCCCC--------------
----------GAGU-------GUUACAG-CCCCCCGGCAGCAGCGCUCG-CCGA--AUCC
--------CGGGGCCGAGGGAGCCGGAUACCCGUC----------------GCCGCGCUC
UCCCCCCG--------GCCUCUCC---------------------CCUCCC---------
------------------------------GCCCCUCC----------------------
-------------CCGUGGGG-------------------------------------UG
GCGGA--AA-----------GGG------------------GGGCG-------------G
UCGC--------------------------------------------GGGGGC----CG
GGCCG-------CCCCUCCCACGGCGC-------GACCGCUCUCCCACCCCCCGUCGCCU
C-----CGUCG-UCCCUCU--CGGGGGUCCGG--------G-GGCCCGGGGGGC---G-G
GGCG----GACUGUC-------------CCCAGUG--CGC-CCC---GG-----GCGUCG
UC--------GCGCCGUC--GGG-CCCGGGG---GG--------GCCGUC-GUCACGCGC
UCUCCCUCCCCUUCUCGGGGUGGGGGGGAGCGAAGCCGAGCGCACGGGGUCGGCGG----
--------CGAUGUCGGC--UACCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CGCGUGCGCGA-GUCAGGGGCUCG-------UCCG------AAAGCCGCCGUGGCGC
AAUGAAGG-UGAAGGGCCCCGUUCCCGGGGGCCCCGAGGUGG-GAUCCCGAGGCCUC---
--UC--------------------------CAGUCCGCCGA---------GGG-------
-------------------------------CGCACCACC-GGCCCGUC----UCGCCCG
-C--------------------CGCG----------------CCGGGGAGG-UG-GAGCA
----------------------CGAGCGUACGCGUUAG-GACCCGAAAGA-UGGUGAACU
AUGCUUGGGCAGGGCGAAG-CAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUCU----------------
--------------------------------------CGCAACGCGUUCGCUCGACAAC
CCGCAGUUUUAUCCGGUAAAGCGAAUGAUUAGA-GGUCUUGG-GGC-C-GAAAC-GAUC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCG--U--GGA-----------------
----GC---CGGG-C---GUGG--AU-G--C-----GAGUGCCU-AGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUUGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGCCGGCAGUCGGAACGGGACGGG-----AGCGGCCGCGGGCGC
GCGACCCC------------------------------GGGGGCCG----------GGCG
G---CGU------CGGCUUCGGCCGG-CCGCCGCC--CGU---CCACCCCCGGGGC--UC
CCCCCGCGGCGUCGG--GCCCCGC---------------------GGAGCCUACGCCGCG
AC-GAGUAGGAGGGCCGCUGCGG-U-GAGCCUU-GAAGCCUA-G-GGCGCGGGCC--C-G
GGUGGAGCCG-CCG-CAGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AACUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUGAGAGAUGGGCG-A-G-UGCC----GU
UCCGA--------AGGGACGGGCG----AUGG---CCUC-----------------CGU-
--------------UGCCCUC------AGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAAUCCGGAGUGGCG---------GAGAUGGGCGCC-GCGA--------
---------------------------GGCGUCC--------AGUGCCGG---UAAC---
-----GC-GA---CC--------------------GAUC-CCGGA-GAAGCCGGCGGGAG
-C-CCGGGGAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCAG-----G-G
-----CG-----CC----------------UUGG-AAU-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GUGCC-UUG-GAA--AG---------
------------------------------------------------------------
CGUCGCAGUUCCGGCGGCGU-CCGGUGAG-CUCUCGCUGGC-CCUUGAAA-A-UCCGGGG
GAGAGG-------------------------------------------GUGUAAAUCUC
G-CGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAAC-GCCUCUGGCAU-
GUUGGA-ACAAUGUAG-GUAAGGGAAGUCGGC-AAGCCGGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGCUG-GGUCGGUC------GGGCUG--GGG-CGCGAAGGC
--GGG-GCUGGGCGCGCGCCGCG---GCUGGACGAGGC-GCCG--CCGCCCCCCUCCCAC
GUCCGG-GGAGAC---CCCCUCCU--UUCCGCCCGGGCCC-----GCC---CUCCCCU-C
UCCCCGCGGGG-------CCCCG--CCGUCCCCCGCGUCGU-CGCCGUGGUC--CCCUCC
UCCCU-----------------------------CCCUU---------------------
---CUUCCCCGUCC------GCGGGGGG---------GACGGGG----CGGGU-------
------------GCGG--GGGGG-CGCGCGC-GCGCGCGG------CCCAGGGGC-----
--G--GC-GGGUCCAACCCCGCGCGG---G--CCGGAGCGG--GG----GGAACCCGCGG
GCCCCCGGU----GGG--GGGGG-GCCCGG-ACACCCGGGGGGGACCGGCG-G-CGGCGG
CGACUCUGGACGCGAG-CCGG-GCCCUUC-------------------------------
------CCG----UGGAUCGC-----CC-CAGCUGCG-GCGGGCGUCGCG-GCCGCUCCC
GGGGAGC--CCGGCGGG--UCGCC-----------------------------CGGCGGG
GUUU-UCCUCC-------GGCC-UCGUCCU-------------------------CCCCC
-------------------UUCC--CCCUCC-------GCGGGGU--------------C
GGGG---G------------------UUCCCGGGGUU--CGGGGUUCUCCUCC-------
-----------GCGCGGCGGUUC--CCCCGCCGGGUGCGCCCCCCGGG-CGCGGU--UUC
CCGCGGCCGCCCGCCU----CGGCCG-GCG--CCUAGCAGC--CGACUUAGA--ACUGGU
GCGGACUAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCG--
--CG-G------------CGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCAG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACC----UAC-UA
UCCAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGGCACGGUGAAGAGACAUGAGAGGUGUAGAAU-AAGU
GGGAGGCCCCC--GGCGCCC------------CCCCGUUCCCC----------GCGA---
----------------GGGGUCGGGGCGGGGUCCGCCGGCCUCGCGGGCC-GC-CGGUGA
AAUA-CCACUACUCUCAUCGUUUUUUCACUGACCC-GG-------U-GAGGCGGG----G
GG-----------GC-------GA--GCCC--------CGAG-GGGCU-CU-CGCUUCU-
-------------------------GGCG-------------------------------
-------CCGAACGCGU------------------C------------------------
--------------------CG----------CGCG------------------------
CGCGGG-----CGG----------------------------------GCG------CGA
------------------------------CCCG----CU--------------------
--------------------------------------CCGGGGACA-GUGCCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCA-AACGGUAAC-GCAGGUGUCCUAAGGCGAGCU
CAGGGAGGACAGAAACCUCCCGUG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUACGAAUACAGACCGUG
AAA-GCGGGGCCUCACGAUCCUUC-----------UGA---CCUUUUGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AU--GUGUUGUUGC
CAUGGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUU-UGGUGUAUGU
GCUUGGCU-GAGG-AGCCAA-U-GGGGCGAAGCUACCAUCUG-UGGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCC-GCCCAA-----GCGGAACGAUACGGCAGCGCCG-----
--------------------------AAGGAGCCUCGGUUGGCCCCG----------GAU
AGCCGGCUCCCCGUCCGUCCC----------------------------CGUCC---GGC
GGGUCCCCGCCUCGUCGCCCCCCCGGGUGCGGGGCGGGU-CCCCCG--CC--GG--GCGU
CGGGACCGGGGUCCGGUGCGGAG---AGCCAUUCGU--CCC--GGGAAACGGG-----GU
G--CGGCCGGAAAGGGGGCCGCCCUCU----CGCCCGUCACGCU---UAACGCACGUU--
--------CG-----------------UGUGGAA---------------------CUUGG
CGCU-----AAA----CCAUUCGUAGACGACCUGCU-UCUGGGUCGGGGUUUCGUACG-U
AGCA--------GAGCAGC-UC----------CCU--CGCUGCGAUCUAUUGAAAGUCAG
CCCUCGACACAAG-GGUUUG--U-----------
>Saccharomyces_cerevisiae
--------------AAACUUUCAAC-AACGGAUC-UCUUGGU-UCUC-G---CAUCGAUG
AAGAACGCAG-CGAAAUGCGAUACGUAAUGUGAAU--U---GCA--GAAUUC-CGUGAAU
CAUCGAAUCUUUGAACGCACAU-UGC---GC----CCCUU-GG---------UAUU----
-----CC---A----G----G---GGGC-A-UGCC-UGU---UUGAGCGUCAUUU-----
----------------------------GUUUGAC-CUCA-AAUCAG-G-UA-GGAGUAC
CCGCUGAACUUAAGCAUAUCAAUAAGCG--GAGGAAAAGAAACCAA-CCGGGAUUGCCUU
AGU-AA-CGGCGAGUGAAGCGGCA-A-AA-GCUCAAAUUUGAAAUCUGGUACCU------
UCGG---UGC--CCGAGUUGUAAUU--UG----------GA-GAGGGCAA-----C----
---------------------UUUGGGGC-----------CG---UU------CCUUG--
UCU-------AUGUUC-CUUG---------------------------------------
----GAACA-GGACG-------UCAUAGAGGGUGAGAAUCCCGUG---------UGG---
C--GAGGAG---UG--CGGUU-CUUUGUA-------------AAGUGCCUUCGAAGAGUC
GAGUUGUUUG---GGAAUGCAGCUCUAA-G-UGGGUGGUAAA-UUCCAUCUAAAGCUAAA
UAUUGG--C-GAGAGACCGAUAGC-GAAC-A-AGUACAGUGAUGGAAAG-AUGAAA-AGA
AC-UUUGA-AAAGAG-A-GUGAAAAAGUACGUGAAAUUGUUGAAAGG--G-AAGGG-CAU
U---UGAU-CAG-ACAUG-------------------GUGUUUUGUG--C------CCU-
------------------------------------------------------------
----------CUGC----UCCUU-------------------------------------
--------------------------------------------G---------------
--------------------------UGGGUAG---------------------------
----------------------------GGGAA----UCUC---GCAUUUC--ACUG---
------------GG-CCAGCAU--C-------------------AG------UU-UU---
---G------GU------------------GGCAGGAU----------------AAAUC-
------CA----UA-------GGA------------------------AUGU--------
------AGCU------------------------UG--CCUC----------------GG
------UAAG---UAUU---------------------AUAGCCUG--------------
----------UG------------------------GGAA----UACUG-CCA-----GC
--------UGGGACU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GAGGAC------
-------------------UGCGACGU---------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------AAGUCAAG------------------------------------------
---------------------------------------------GAUGCUGGCAU----
-------------AAUGG--UUAUAUGCCGCCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CGUCUAUGCGA-GUGUUUGGGU--------GUAAA--------ACCCAUA--CGCGU
AAUGAAAG-UGAACGU--------------------AGGUUG-GGGCCUC----------
------------------------------------GCAAG---------AGG-------
-------------------------------UGCACAAUC-GACCGAUC----CU-GAUG
----------------------UCUU-----------------CGGAUGGAUUU-GAGUA
----------------------AGAGCAUAGCUGUUGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAAUAGGGUGAAGCCAGAGGAAAC-UCUGGUGGAGGCUCGU--AGCGGUUCUGA
CGUGCAAAUCGAUCGUCGAAUUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCUGCCGAAGUUUCCCUCAGGAUAGCAGAAG-CUCG----------------
------------------------------------------------------------
UAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGA-GGUUCCGG-GGU-C-GAAAU-GACC-
U-UGACCUAUUCUCAAACUUUAAAUAUGUAAGAA--------------------------
---------------GUCCU-UGUUA-CU--UAAU--U--GAA-----------------
----CG---UGGA-C--AUUUGA-AU-G--AA----GAGCUUUU-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGC-GGGAUG---AACCGAACGUAG-AGUUAAGGUGC
CGGAAU--AC-ACG-CU-CA---UC-AGACACC-ACAAAAGGUGUUAGUUCAUCUAGACA
GCCGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCGGCC
-----GAAUGAACUAGCCCUGAAAAU-GGAU-GGCGCUCA-AGCGUGU----------UA
CCUAU-ACUCUACCGUCAGGGUUGA-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------UAUGAUGCCCUG
AC-GAGUAGGCAGGC-GUGGAGG-U-CAGUGAC-GAAGCCUA-G-ACCGUAAGGU--C-G
GGUCGAACGG-CCU-CUAGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GACUGAAGUGGGG-AAAGGUUCC-ACGUCA
ACAGCAGUUGGACGUGGGUUAGUCGA--UC-CUAAGAGAUGGGGA-A-G-CUCC----GU
UUCAA--------AG------GCC-----UGA---UUUU-----------------A---
--------------UGCAGGC-------CAC----CA-UC-GA-A-AGGGA-AUCCGGUU
-AAGA-UUCCGGAACCUGGA---UAUG------GAU--------UCU-------------
-------------------------------------------UCA-CGG---UAAC---
-----GU-AA---CU--------------------GAAU-GUGGA-GACGUCGGCGCGAG
CC-CUGGGAGGA-GU------UAUCU-----U-UUCUUC-UUAACA-GCU-U-----A-U
-----CA-----CC----------------CCGG-AAU-U-GG-----------------
---UUUAU-CCGGAGAUGG-----GGUCUU----AUGGC-UGG-AAG--AG---------
------------------------------------------------------------
-GCCAGCACCUUUGCUGGCU-CCGGUGCG-CUUGUGACGGC-CCGUGAAA-A-UCCACAG
GAAGGA---------------------------------------------AUAGUUUUC
A-UGCCAGGUCGUACUGAUAACCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUAGU-U-
GAUAGA-AUAAUGUAG-AUAAGGGAAGUCGGC-AAAAUAGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGUCG-GGUAGUGA------GGGCCUU-GGU--CAGAC-GC
--AGC----GGG-------CGUG----CUUG---------UGG--AC-------------
--------------------------------------------------------UG-C
UU-----------------GGU--------------------------------------
------------------------------------------------------------
-------GGGGCUU--------GCUC--------------UG------------------
--------------CU--AG----------------------------------------
-------------------------------------GCGG-------------------
----------------------------------------------------A-CU----
-----------ACUUG-CGU--GCCU-UG-------------------------------
------UUG----UAGA-CGG-----CCUUGGUA--------------------------
------------------------------------------------------------
------------------GGUC--------------------------------------
--------------------------UCUU------------------------------
GUAG---A----------------------------------------------------
------------------------------------------CC----------------
-------GUCG---------CUUGCU-ACA--AUUAACGAU--CAACUUAGA--ACUGGU
ACGGACAAGGGGAAUCUGA-----CUGUCUAAUUAAAACAUAGCAUUGCGAUGGUCAG--
--AA-A------------GUGAUGUUG-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAACCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUAUC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUUUGACAUUGUGAAGAGACAUAGAGGGUGUAGAAU-AAGU
GGGAGC-----------------------------------------------UUCG---
------------------------------------------------GC-GC-CAGUGA
AAUA-CCACUACCUUUAUAGUUUCUUUACUUAUUC-AA-------U-GAAGCGGA-----
-G-----------CU-------GG--AAUU--------CAU---UUUC-C--ACGUUCU-
-------------------------AGCA-------------------------------
------UUCAA--GGUC-------------------------------------------
--------------------CC----------AUUC------------------------
----GG------------------------------------------GGC------UGA
------------------------------UCCG----GG--------------------
--------------------------------------UUGAAGACA-UUGUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGUUA-AACGAUAAC-GCAGAUGUCCUAAGGGGGGCU
CAUGGAGAACAGAAAUCUCCAGUA-GAACA-AAAGGGUAA-AAGCCCCCUUGAUU-UUGA
----------------------------------UUUUCA--GUGUGAAUACAAACCAUG
AAA-GUGUGGCCUAUCGAUCCUUU-----------AGU---CCCUCGGAA----------
----------UUUGAGGCUAGAGGUGCCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGUCAAGCGUUCAUAGCGACAUUGCUUUUUGAUUCUUCGAUGUCGGCUCUUCCU
AUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AA---UGUUACCGC
AAUAGU-AAU-UGAACUUAGUACGAGAGGAA-CAGUUCAUUCGGAUAAU-UGGUUUUUGC
GGCUGUCU-GAUC-AGGCAU-U-GCCGCGAAGCUACCAUCCG-CUGGAUUAUGGCUGAAC
GCC-UC--UAAGUCAGAAUCCAUGCUAGA----ACGCGGUGAUUUCUUUGCUCCA-----
---------------------------CACAAUAUAGAUGGAUACGA-----------AU
A--------------------------------------------------------AGG
CGU------------C-------------------------CUUGU--GG--CG--UC--
------------GCUGAACCAUA-------GCAGGC------UAGCAACGGUG-----CA
C--UUGGCGGAAA-GGCCUUGGGUGCU----UGCUGGCGA--------AUUGC--AAU--
--------GU-----------------CAUUUUG---------------------CGUGG
GGAU-----AAA----UCAUUUGUAUACGACUUAGA-UGUACAACGGGGUAUUGUAAG-C
AGUA--------GAGUAGC-CU----------UGU--UGUUACGAUCUGCUGAGAUUAAG
CCUUUGUUGUCU--GAUUUG--U-----------
>Schizosaccharomyces_pombe
--------------AAACUUUCAGC-AACGGAUC-UCUUGGG-UCUC-G---CAUCGAUG
AAGAACGCAG-CGAAAUGCGAUACGUAAUGUGAAU--U---GCA--GAAUUC-CGUGAAU
CAUCGAAUCUUUGAACGCACAU-UGC---GC----CUUUG-GG---------UUCU----
-----AC---C----A----A---AGGC-A-UGCC-UGU---UUGAGUGUCAUUA-----
-----------------------------UUUGAC-CUCA-AAUCAG-G-UA-GGACUAC
GCGCUGAACUUAAGCAUAUCAAUAAGCG--CAGGAAAAGAAAAUAA-CCAUGAUUCCCUC
AGU-AA-CGGCGAGUGAAGCGGGA-A-AA-GCUCAAAUUUGAAAUCUGGCAACAUUUCUU
UUGU---UGU--CCGAGUUGUAAUU--UC----------AA-GAAGCUGC-----U----
---------------------UUGAGUGU-----------AG---ACG-----AUCGG--
UCU-------AAGUUC-CUUG---------------------------------------
----GAACA-GGACG-------UCAGAGAGGGUGAGAACCCCGUC---------UUU---
G--GUCGAUU--GG--AUAUG-CCAUAUA-------------AAGCGCUUUCGAAGAGUC
GAGUUGUUUG---GGAAUGCAGCUCUAA-A-UGGGUGGUAAA-UUUCAUCUAAAGCUAAA
UAUUGG--C-GAGAGACCGAUAGC-GAAC-A-AGUAGAGUGAUCGAAAG-AUGAAA-AGA
AC-UUUGA-AAAGAG-A-GUUAAAUAGUACGUGAAAUUGCUGAAAGG--G-AAGCA-UUG
G---AAAU-CAG-UC----------------------UUACCUGGGU--GA---------
-GAUCAG-----------------UAG---------------------------------
----------UCUC----UUCGC-------------------------------------
------------------------------------------------------------
-----------------------------GAGA---------------------------
----------------------------CUAUGCA--CUCUGAACCUG-UG--GUA----
------------GG-UCAGCAU--C-------------------AG------UUUUC---
---G------GG------------------GGCGGAAA----------------AAGAA-
------UA----AG-------GGA------------------------AGGU--------
------GGCU------------------------UUC-CGGG--UUCU-------GCCUG
G-----GGAG---UGUU--------------------UAUAGCCCU--------------
----------UGUU----------------------GUAA----UACGU-CCA-----CU
--------GGGGACU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GAGGAC------
-------------------UGCGGCUU---------------------------------
------------------------------------------------------------
---------------------------------------C--------------------
----------GUGCCAAG------------------------------------------
---------------------------------------------GAUGCUGACAU----
-------------AAUGG--UUUUCAAUGGCCCGUCUUGAAACACGGACCAAGGAGUCUA
-G-CAUCUAUGCGA-GUGUUUGGGUG-------AUGAA-------AACCCAUC--CGCGA
AAUGAAAG-UGAAUGC--------------------AGGUGG-GAACGCCC---------
------------------------------------UUGUG---------GCG-------
-------------------------------UGCACCAUC-GACCGACC----CG-GAAG
-UU-------------------UGUC--------------A-AUGGAAGGGUUU-GAGUA
----------------------AGAGCAUAGCUGUUGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAAUAGGGUGAAGCCAGAGGAAAC-UCUGGUGGAGGCUCGU--AGAGAUUCUGA
CGUGCAAAUCGAUCUUCAAAUUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCUGCCGAAGUUUCCCUCAGGAUAGCAGAAA-CUCA----------------
------------------------------------------------------------
GAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGA-GGUCUUGG-GGA-A-GGAAU-UUCC-
U-CAACCUAUUCUCAAACUUUAAAUAUGUAAGAC--------------------------
---------------GCCCU-UGUCG-CU--UAAU--U--GGA-----------------
----CG---UGGG-C--CAUCGA-AU-G--A-----GAGUUUCU-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGC-GGGAUG---AACCGAACGUGA-GGUUAAGGUGC
CGGAAU--GU-ACG-CU-CA---UC-AGACACC-AGAAAAGGUGUUAGUUCAUCUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUGAACUAGCCCUGAAAAU-GGAU-GGCGCUUA-AGCGUAC----------UA
CCCAU-ACCUCACCGUCUGGGUUAGC----------------------------------
----------------------------------------------------U-------
------------------------------------------------------------
-----------------------------------------------UUGAGAAGCUCAG
AC-GAGUAGGCAGGC-GUGGAGG-U-UUGUGAC-GAAGCCUU-G-GGCGUGAGCC--U-G
GGUCGAACAG-CCU-CUAGUGCAGAUCU-UGGUGG-AAGUA-GCAAAU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GACUGAAGUGGGG-AAAGGUUCC-AUGUGA
ACAGCAGUUGGACAUGGGUUAGUCGA--UC-CUAAGAGAUAGGGA-A-G-CUCC----GU
AUGAA--------AGUU----GCA-----CGA---UUU----------------------
--------------UUCGUGC------CUCC----UA-UC-GA-A-AGGGA-AUCCGGUU
-AAUA-UUCCGGAACCAGAA---GGUG------GAA--------UCA-------------
-------------------------------------------ACA-CGG---CAAC---
-----GU-AA---AU--------------------GAAG-UUGGA-GACGUCGGCGGGAG
CC-CUGGGAAGA-GU------UCUCU-----U-UUCUUU-UUAACA-AAC-C-----A-U
UGAACUA-----CC----------------CUGA-AAU-C-GG-----------------
---UUUAU-CCGGAGCUAG-----GGUAUG----GUGUU-UGG-AAG--AG---------
------------------------------------------------------------
UUCAGCGCCUCAUGCUGAAU-CCGGUGCG-CUCUCGACGGC-CCUUGAAA-A-UCCAACG
GAAGAAUGGACCUU-------------------------------CGGGUCCUUGUUUUC
A-CAUCUGGUCGUACUCAUAACCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUAGU-U-
GAUAGA-ACAAUGUAG-AUAAGGGAAGUCGGC-AAAAUGGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGUUG-GGUACGUU------GGGCCUU-GGAACCUGA--AC
--GGU----UGCU--GGACUGAG---CGUGG--------ACCG--AUG------------
--------------------------------------------------------UC-U
UU-----------------UCUC-------------------------------------
------------------------------------------------------------
-------GCCUUUCG-------GGGU--------------GA------------------
--------------GA--AG-------------------------------GGAU-----
--G----------------------------------UUGGA------------------
----------------------------------------------------C-CUG---
-----------CUUGGACCUU-GGCG-GC-------------------------------
-------CG-----GGA-AGU-----CCUUGGUC----G---------------------
------------------------------------------------------------
------------------GGCU--------------------------------------
-------------------UUUC--UCCUUCU---------------------------C
GGGG---A----------------------UUAU------G-------------------
------------------------------------------CU----------------
-------CU--UAC------UGGCGU-ACG--UUUAACAAC--CAACUUAGA--ACUGGU
ACGGACAAGGGGAAUCUGA-----CUGUCUAAUUAAAACAUAGCAUUGCGAUGGCCAG--
--AA-A------------GUGGUGUUG-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAACCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
ACUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUAUC----UAC-UA
UCUAGCGAAACC-ACAGCCUGGGGAACGGGCCAGGCAAAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUUUGACAUUGUGAAGAGACAUAGAGGGUGUAGGAU-AAGU
GGGAGUAUGU-------------------------------------------UUCG---
--------------------------------------------GCAUAC-GC-CGGUGA
AAUA-CCACUACCUUUAUCGUUUCUUUACUUAAUC-AA-------U-GAAGCGGA-----
-A-----------UU-------GG--GAUU--------UAU---UUCC-C--AUAUUCU-
-------------------------AGCG-------------------------------
-------UUAA--AGUU-------------------------------------------
--------------------UC--------------------------------------
UUCGCG------------------------------------------AAC------UGA
------------------------------UCCG----CG--------------------
--------------------------------------UUGAUGACA-UUGUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGUUA-AAAGAUAAC-GCAGGUGUCCUAAGGGGGACU
CAUCGAGAACAGAAAUCUCGAGUA-GAAUA-AAAGGGUAA-AAGUCCCCUUGAUU-UUGA
----------------------------------UUUUCA--GUGUGAAUACAAACCAUG
AAA-GUGUGGCCUAUCGAUCCUUU-----------GUU---CCCUCGAAA----------
----------UUUGAGGACAGAGGUGCCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGCGUUCAUAGCGACGUUGCUUUUUGAUUCUUCGAUGUCGGCUCUUCCU
AUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AA--GUGUCGUCGC
AAUGGU-AAU-UCAACUUAGUACGAGAGGAA-CCGUUGAUUCAGAUCAU-UGGUAUUUGC
GGCUGCCU-GACA-AGGCAA-U-GCCGCGGAGCUAUCAUCUG-CCGGAUAACGGCUGAAC
GCC-UC--UAAGCCAGAAUCCGUGCCAGA----AAGCGACGAU-UUUUUGGUCCG-----
---------------------------CAUGAUUUAUAUGUAUAAAA-----------AU
AG-------------------------------------------------------AGG
UAG-------------GACUU--------------------GUUCC--UA--CU--CU--
------------CCUGUAUCGUA-------GAAGAU------GGGCGA-UGGU---U-GA
U--GAAACGGAAG-UGUUUUAUUGACU----UGUCCAUGA--------AAUUCC-AUU--
--------GA-----------------AAUCUUG---------------------UGCGG
AAUC-----GAA----UCCAUUGCAUACGACUUUAA-UGUGGAACGGGGUAUUGUAAG-C
AGUA--------GAGUAGC-CU----------UGU--UGUUACGAUCUGCUGAGAUUAAG
CCUUUGUUUCCC--AAGAUU--U-----------
>Tetrahymena_thermophila
---------AGA--AAAUUUUCAAC-GGUGGAUA-UCUAGGU-UCCC-G---UGACGAUG
AAGAACGCAG-CGAAAUGCGAUACGCAAUGCGAAU--U---GCA--GAAC---CGCGAGU
CAUCAGAUCUUUGAACGCAAGU-GGU---GG----AGGUG------------UAAA----
----------A----A----C---CUUC-A-UGUU-UGU---UUCAGUGUGGAA------
-----------------------------CUACAC-CUGA-AA-CAA-G-CA-AGAUUAC
CCGCUGAACUUAAGCAUAUCAGUAAGCG--GAGGAAAAGAAACUAA-CUAGGAUAGCCCC
AGU-AA-UGGCGAAUGAACAGGCU-A-AA-GCUCAAAGUGAAAAUCUGAAGUGGUC----
AACA---CAA--CAGAAUUGUAAUC--UA----------AA-GGGUCAAC-----C----
---------------------UGAAACUA-----------AG---CU------CCUCU--
CAU-------AAGUUC-CUUG---------------------------------------
----GAACA-GGACG-------UCAAAGAGGGUGACAACCCCGUA---------GUC---
G--GAGAGGA--AG--GCUGG-UGUAA---------------GGGAGAUUUCAAAGAGUC
GGGUUGUUUG---GGAUUGCAGCCCUAA-G-UGGGAGAUAAA-CUUCUUCUAAAGCUAAA
UAUACA--C-GGGAGACCGAUAGC-GAAC-A-AGUACUGCGAAGGAAAG-AUGAAA-AGA
AC-UUUGA-AAAGAG-G-GCUAA--AAGACUUGAAACCGUUGAGAAG--G-AAGCU-GUA
G---AAGA-GCAAUAAACUGGACGGCGCAUAAGGGGGAAGUACUAAU---------CAC-
-UGCAG------------------AGU---------------------------------
----------CGAU---ACGU---------------------------------------
-----------------------------------------AA-A---------------
---------------------------AGGUCG------------------------AUG
-------------------AGUA----AGGAAA------------UGG--U--ACA----
-----------GAACUUGCUAC--GCCGGUCAGAAGACAAAAUGGG------UU-CA---
---G------AU------------------UGAAGGA-----------------GUCAC-
------CUG--AGA-------UCG------------------------------------
------GGCA----------------------------------GCA-------------
------AUGC-------A------------------------GAUC--------------
-------AAAAGGA------------------------------AAACU-UCA-----AA
--------CUGGACU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------GAGGGG----C-
-----------------CUAAGGGCGA---------------------------------
------------------------------------------------------------
------------------------------------------------------------
--U------UUUGUC---------------------------------------------
------------------------------------------------------------
-----------AAAAUGG--CUUCUACUGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-U-CAAUUAAGCGA-GUGAUAGGGUG--------GAAA-------AACCCGUC--CGCGA
AACGAAAG-UGAGUA-------------------CAAGGUGC-CAAGCC-----------
------------------------------------GCAA----------GGU-------
-------------------------------AGCAGCAUC-ACCCGACC----UU-GAGU
----------------------CUCCG----------------ACGAAGGGUUC-GAGGA
----------------------AGAGCUUAAUUGUUAG-GACCCGAAAGA-UGGUGAACU
ACGCUUGAAUAGGGUGAAGCCAGGGGAAAC-UCUGGUGGAAGCUCGU--AGCGAUACUGA
CGUGCAAAUCGUUCGUCAAAUUUGAGUGUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCUCUCAGGAUAGCAAGAG-CAAG----------------
-----------------------------------------------------------U
ACGCAGUUUUAUUAGGUAAAGCGAAUGAUUAGA-GGACUCGG-GGU-U-CCAAG-AAUC-
U-CGACCUAUUCUCAAACUUUAAAUUGGUAAGAG-CC-----------------------
---------------GCGGA-GUUUA-CU--UAAA--U--GAA-----------------
----CU---CUCG-G---GAAGA-AU-G--CA----GUGCUCUU-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGA-GGGAUG---AACCUAACGUUG-AGAUAAGGCGC
CCAAAU--GC-ACG-CU-CA---UC-AGAUACC-ACAAAAGGUGUUGGUUCAUACGGACA
GCAGGACGGUGGCUAUGGAAGUUAGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUGAACUAGCCCUGAAAAU-GGAU-GGCGCUGA-AGCGUGU----------UG
CCGAU-ACUCAACCAUCAGAGCAAA-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------UGCGAGGCUUUG
AU-GAGUAGGAGGGC-GUGAUCG-U-U-GCCUA-GAAGUAUU-G-GGCGUGAGCC--U-A
UAUGGAGCAG-CGA-UUAGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GACCGAAGUGGAG-AAGGGUUCC-AUGAGA
ACAGCAAUUGUUCAUGGGUUACUCGA--UC-CUAAGACAUAGGUU-A-A-CUCC----UU
GCAAU--------ACAA----GAA-----GAC----AUU---------------------
--------------CGUUUUC--------GU----UG-UC-AA-A-AGGGA-AUGAGGUU
-AAUA-UUCCUCAAGCUGGA---CGUG------GUA--------UAG-------------
--------------------------------------------AG-CGG---UAAC---
-----GC-AA---AG--------------------AAAC-CCGGA-GACGUCAGCAGGUG
UC-ACUGGAAGA-GU------UAUCU-----U-UUCUUU-UUAACA-UAC-U-----A-U
-----GG-----CC----------------AUGA-AAU-U-GG-----------------
---AUUAU-CCAGAGAUAU----CGGCUGU----AUGUA-UGG-CAG--AG---------
------------------------------------------------------------
CAGCUCACCCUAAGAGCUGU-CAGUUGCG-CACCUGAUGAC-CCUUGAAA-A-UCUGGGG
GAGACA-----------------------------------------------UAAUUUC
A-CGCCAGUUCGUACCCAUAACCGCAUCAGGUC-UCCAAGGU-UAGCAGCCUCUGGU-C-
CAUAGA-ACAAUGUAG-AUAAGGGAAGUCGGC-AAAUUGGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-GA--GGAUCG-GGUAUAAA------GGCUU---UGU----------
----------AAUG----AUAUCCAAGCUUG--------UUUG-----------------
-----------------------------------------------------------U
UA-----------------GUG--------------------------------------
------------------------------------------------------------
-------UG-----------GCAACA--------------U-------------------
--------------GC--UG----------------------------------------
-------------------------------------AUAG-------------------
------------------------------------------------------------
-----------ACUUG-CGAACGAUG----------------------------------
---------------AAUUUG-----CA-AGGUA--------------------------
------------------------------------------------------------
------------------GGUU--------------------------------------
------------------------------------------------------------
-UCG---G----------------------------------------------------
------------------------------------------CC----------------
-------GU-----------CUUUAU-ACA--AUUAACGAU--CAACUCAGA--ACUGAA
GCGGACAAAGGUAAUCCGA-----CUGUUUAAUAAAAACAAAGCAUUGUGACGGCCUC--
--AA-C-------------AGGUGAUG-ACACAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAC--------------GCAA--------------UUCAACCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAAUGAGA--UUACCACUGUCCCUAUC----UAC-UA
UCUAGCGAACCC-ACAGCUAAGGGAACGGGCUUAGAAUAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUAACUUUGUGAAAUGGCACGUGGGGUAUAGCCU-AGGU
GGGAGA-----------------------------------------------GCAA---
------------------------------------------------UC-GA-UCCUGU
AAAA-CCACUACCCACGUAGUCAUUUUGCUUAUUU-CG-------U-GAAGAAAA-----
-G-----------AC-------UG--GUGC--------AAA---CCAG-U--U----CU-
-------------------------AAAG-------------------------------
-------UUAA--GGUC-------------------------------------------
--------------------------------AUU-------------------------
--UAUU------------------------------------------GAC------UGA
------------------------------UUUU----UG--------------------
--------------------------------------CGAAAGACA-UGGUUAGGGGGG
GAGUUUGUCUGGGGCGGAAUGCCUGUUA-AACCAUAAC-GCAGGCGUCCUAAGUGUAGCU
CAGUGAGAACGGAAAUCUCACGUA-GAACA-AAAGGGUAA-AAGCUACAUUGAUU-UUGA
----------------------------------UUUUCA--GUAGGAAUACAAACCGCG
AAA-GCGUGGCCUAUCGAUCCUUU------------AA---CUUUACAAG----------
----------UUUUAAGCUAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGAGUUCAUAUCGACGUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACAACGUGUCGGAUUGUUCACCCGCUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AA--ACGAUGUUGC
GACAGU-AAU-UUAAGUUAGUACGAGAGGAA-CACUUAAAUCAGAUAAU-UGGUAAAUAC
GGUUGUCU-GAAA-AGACAA-U-GCCGUGAAGCUACCAUCUG-UUGGAUUAUGACUGAAG
GCC-UC--UAAGUCAGAAUCCAUGCUGGA----AAGCAAUGUC-UAAGUGUGA-------
------------------------------------------------------------
---------------------------------------------------------UGA
UAA-----------ACGAAAAAA-----------------A-------AUAAAA--AU--
------------UAAGUUCGAAA--------------------GGUAG-AGCG-----GG
G-AAGAGCGAAAA---AGCUUGACCUUAA--CUGCU-----------AAUCGUA-AUU--
--------CC-----------------AAAUUAU---------------------CAUCU
ACGU-----AAA----UCUUUUGUAGACGACUUAAC--AUGGAAC-GGGUAUUGUAAG-C
AUGA--------GAGUAGA-AU----------U----UCCUACGAUCUGCUGAGAUUCAG
CCCGUCUCCUUA--GAUUUAUCU-----------
>Thalassiosira_pseudonana
------CUAUUA--CAACUUUCAGC-AAUGGAUG-UCUUGGA-UCCC-A---CAACGAUG
AAGAACGCAG-CGAAAUGCGAUACGUAAUGCGAAU--U---GCA--GGACCU-CGUGAAU
CAUCAAACUUUUGAACGCACAU-UGC---GC----UUUUG-GGU---------AAU----
----GCC---C----A----A---GAGC-A-UGCU-UAU---CUGAGUGUCCCGAAUUUC
-------------------------AUCUAUGGAU-CUCA-GAUUAA-G-UA-AGACUAC
CCGCUGAAUUUAAGCAUAUUAAUAAGCG--GAGGAAAAGAAACUAA-CAAGGAUUCCCCU
AGU-AA-CGGCGAGUGAAGCGGGA-A-GA-GCUCACCAUGUGAAUCUAUGUAACCCUUC-
GGGG---UGC-AUCGAAUUGUGGUC--UG----------GA-GAAGUACU-----G----
---------------------UCGGCCGU-----------GG---U-------UCCGG--
GCC-------AAGUCU-CUUG---------------------------------------
----GAAAA-GAGCA-------GCUGAGAGGGUGAAACUCCCGUU---------CUU---
GCCUGGAAA---CA--UUGUG-CCUUGGC-------------AUAUGCUUUCUAUGAGUC
GAGUUGCUUG---GGAUUGCAGCUCAAA-U-UUGGUGGUAAA-UUCCAUCUAAAGCUAAA
UAUUGG--U-GGGAUACCGAUAGU-GCAC-A-AGUACCGUGAGGGAAAG-AUGCAA-AGA
AC-UUUGA-AAAGAG-A-GUUAAAGAGUACCUGAAAUUGUUGAAAGG--G-AAGCG-AAG
G---AAAC-CAG-UG-----------------------CCAACGUUG--UG------UC-
--AUACUU----------------UCU---------------------------------
----------CUGC----CGCUU-------------------------------------
--------------------------------------------G---------------
---------------------------CGGUAG---------------------------
----------------------------GGACG------CU---GUGG--C--GCUACAU
G-----------GG-UCAGCAU--C-------------------GG------CU-UU---
---G--------------------------UGCUUGG--------------------GU-
------CAA--ACGU----UCAGU------------------------UGGU--------
------AGGC------------------------GG--CUCC--UCG----------GAG
UU---AGUGC-----------------------------CUUCUGUUC------------
---------AUGU-------------------------------CCUGGGUCG----GGC
--------UGAGGUC---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------AG---------
--------------------UCACUAU---------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------GUGCUCGU------------------------------------------
---------------------------------------------GAUGCUGACGA----
-------------AAUGG--UUUUCUUUACCCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CAUAUGUGCGA-GUACAAAGGU--------GGCAA--------ACCUGCG--UGCGC
AAUGAAAG-UAACAGU---------------------GGUUG-GAUCCC-----------
------------------------------------UCCG----------GGG-------
-------------------------------UGCACAAUC-CGCCGGCC----AA-UAUC
C---------------------UUCG----------------GGAGAAAGGUCU-GAGUG
----------------------UGAGCAUACAUGUUGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGAGUAGGGCGAAGCCAGGGGAAAC-UCUGGUGGAGGCUCGU--AGUGAUUCUGA
CGUGCAAAUCGAUCAUCAAAUUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAAUUUCCCUCAGGAUAGCUGCAA-UUAA----------------
------------------------------------------------------------
--UCAAUUUUAUCAGGUAAAGCGAAUGAUUAGA-GGUUCCGG-GGG-C-GUAAU-GCCC-
U-CGGCCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------CCCAG-GGUUG-CU--UAAU--U--GAA-----------------
----CC---CUGG-C---GUCGA-AU-G--A-----AGGUUGCU-AGUGGGC-C-ACAC-
C-GGG-UAAGCUGGUU-UGGCGAUGC-GGGAUG---AUCCGAACGUUU-AGUUAAAGUGC
CAAAGU--AU-UCG-CU-CA---CCUAGAUCCC-ACAAAAGGUGUUGGUUCAUUUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUGAACUAGCCCUGAAAAU-GGAU-GGCGCUGA-AGCGAAU----------CA
CUUAU-ACUAAACCACCAGGCCAAG-----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------UGCCAAGGCCUG
GU-GAGUAGGAGGGC-GUGAAGG-U-U-GUUGU-GCAGCUUA-U-ACCGUGAGGU--U-A
AGUGAAACGG-CCU-UUAGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GACUGAAGUGGGG-AAAGGUUCC-ACGUGA
ACAGCAAUUGGACGUGGGUUAGUCGA--UC-CUAAGAGAUAGGAG-A-A-AUCC----GU
UUCAA--------AGU-----GAG-----UGU---UCUU-----------------CGG-
--------------UUCGCUC------CGCC----UA-UC-GA-A-AGGGA-AUCUGGUU
-AAUA-UUCCAGAACCAGGA---CGUG------GAU--------AUU-------------
-------------------------------------------GAG-UGG---UAAC---
-----AC-AA---GC--------------------AAAG-CCGGG-UACGAUGGCGGGAG
CC-CUGAGGAGA-GU------UCUCU-----C-UUCUUC-UUAACA-AGCAC----AC-U
-----AA-----CC----------------CUGG-AAU-C-GG-----------------
---AUUGA-CCGGAGAUAG-----GGUUGG----AGUCU-UGG-GAA--AG---------
------------------------------------------------------------
GUGGAUAGUUUUUGUCUGCU-UCGGUGCG-CUCUCGUUGUC-CCUUGAAA-C-CCCGGUG
GCGUGA---------------------------------------------CUUAUUCGC
A-CCCCUGGUCGUACUGAUAACCGCAUCAGGUC-UCCAAGGU-UAGCAGCCUCUAGU-U-
GAUAGA-AUAAUGUAG-GUAAGGGAAGUCGGC-AAAAUAGAUCCGUAACUUCGG-GAAAA
GGAUUG-GCUC-U-GA--GGGUUG-GGCCUGGG------GGUC----CCU---------C
--GUU----UGAUG-UUGCGAGG---ACUAG---------GAG-----------------
--------------------------------------------------------AGAC
UG-----------------GCU--------------------------------------
------------------------------------------------------------
---------------------CACGC--------------U-------------------
--------------GG--AC----------------------------------------
-------------------------------------UUUC-------------------
----------------------------------------------------C-------
-----------AG--G-UC---UUCCUUC-------------------------------
------GGA---------CGG-----CGGGGGGA--------------------------
------------------------------------------------------------
------------------UGUG--------------------------------------
---------------------------CUU------------------------------
-GCA--------------------------------------------------------
------------------------------------------CU----------------
-------UU-----------CCCCAGUGCG--UAGAACAAC--CAGCUCAGA--ACUGGA
GCGGACAAGGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUUGCGACGGCCGG--
--AG-A-------------CGGUGUUG-ACGCAAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GGAA--------------UUCAACCAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAAUGAGA--UUCCCACUGUCCCUAUC----UAC-UA
UCUAGCGAACCC-ACAGCCAAGGGAACGGGCUUGGAAUAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCCGACGUUGUGAAAUGACUUAUGAGGUGUAGAAU-AAGU
GGGAGC-----------------------------------------------UUCG---
------------------------------------------------GC-GC-ACAUGA
AAUA-CCACUACUCGUAAUGUUGUUUUACUUAUCA-UG-------U-GACGUAGC-----
-AC----------CC-------AGCCGUCU-------UCAC--GGGCGCC--UGGUUCU-
-------------------------AGAU-------------------------------
-------UUAA--GUCA-------------------------------------------
--------------------------------ACU-------------------------
--UGUU------------------------------------------UGG------CGA
------------------------------GCUA----CG--------------------
--------------------------------------CAUGAGACA-ACGUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGUUA-AACAAUAAC-ACAGGUGUCCUAAGGUCAGCU
CAAUGAGAACAGAAAUCUCAUGUA-GAACA-AAAGGGUAA-AAGCUGACUUGAUU-UUGA
----------------------------------UUUUCA--GUACGAAUACAAACCGGG
AAA-CCGUGGCCUAUCGAUCCUUU-----------CAG---UUUUUAGAA----------
----------UUUGAAGUGAGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGCCAAGCGUUCAUAGCGACGUUGCUUUUUGAUUCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGUCGCAGAAGUCACCAAGUGUAGGAUUGUUCACCCACUAACAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AA--UUGUUGUCCC
GACAGU-AAU-CCAACUUAGUACGAGAGGAA-CCGUUGGUUCAGAUAUU-UGGUAA-UGC
GGUUGGCU-GAAC-AGCCAA-U-GCUGCAAAGCUACCAUCUG-UAGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCAUGCUGG-----CAGGGAUGAU-AACCCCCUUGA-----
---------------------------CCACUGUUACCU---------------------
----------------------------------------------------------GA
GUA---------------------------------------------GCAAUA--GU--
------------CACGUAUCAAC--------ACCACC--CCCUGGUA---GCG-----CU
G--UACACUAAA------GUACAAGCU----UGCCG-----------AAACACA-AUU--
--------UC-----------------CAAUGAU---------------------GGUCA
AGUC-----AAA----UCCUUUGUAGACGACUUAAU-UAAGGAACGUGGUACUGUAAG-C
AUGA--------GAGUAGC-CU----------CUG--UGCUACGAUCUGCUGAGGUUCUG
CCUCUGUUCCUG--UGAUUUGUG-----------
>Trypanosoma_brucei
---------------AACGUGUCGC-GAUGGAUG-ACUUGGCUUCCU-A---UUUCGUUG
AAGAACGCAG-CAAAGUGCGAUAAGUGGUAUCAAU--U---GCA--GAAUC--AUUUCAU
UGCCCAAUCUUUGAACGCAAAC-GGC---GC----AUGGG-AGAAGCUC---UCUC----
GAGCCAU--CC----C----C---GUGC-A-UGCC-ACAUUUCUCAGUGUCGAAU-----
-----------------------------UCAGAC-CUGA-GU-GUG-G-CA-GGACCAC
CCGCUAAACUUAAGCAUAUUACUCAGCG--GAGGAAAAGAAAACAA-CCGUGAUUCUCUC
AGUCAG-CGGCGAGCGAAGAGGGA-UUCA-ACUCGUUGCCGAAUCGGGUCUUAC------
-AUG---ACC--UCGAACUGUGGCA--CCAUUUUUGUGGCC-GUUCUUAU--AGGG----
---------------------CUGGUGCA-----------GG-----------CGUGG--
CGG-------AAUUCA-AUUG-CAAAGCAAACCCGUUGCUGAACACAUUUACAACCCUUC
AUGUGAGUA-UUGAG-------CCAAAGAAGGUGUCAGCCCAUUACAUUCCUUAGCC---
A--CGGAGCCU-AC--GCGCCUCCUCAU--------------GUUCGGUCCAAGAGAGUA
GCACUGUUUG---GGAAUGCAGUGUCAAGC-CGGCAGGUAUU-UGUCUGCCAAGGUUAAA
UAUAGAGUA-GGAAGACCGAUAGC-GAAC-A-AGUAGCGUGAGCGAAAGUUUGAAA-AGU
AC-UUUGG-AAAGAG-A-GUGACAUAGAACCUGAAAUCGUGACAACG--A-CAAUG-GAA
G---UACCUUCAUUUCUUU-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------UUUUUA--C-------------------GG------CC-AG---
--AC------CC------------------AACCUC---------------------GC-
------CG----CG-------CAAUUU---------------------------------
----CCUUCC------------------------GG---GGC--UCAA------CAUCCG
--------GG-------------------------UUUUCACUGUG--------------
----------CGG-----------------------GUUUCUC-UUUUG-AGGUCAUGGG
GUGCGUGAGUGGGCGGAAU-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------AAAGGG----------------------------------------
------------------------------------------------------------
------------------------------------------------U-----------
---------------------CGGUGU-------GUU-----------------------
-----------------------------------------------------------G
UGUG----UGGGUU--------------UUUCUCU--CAC------------------UC
UCU------UCCUCCUUC--------------------------CCUGUC---CGUGCGU
CU------------------------------------------CGACGCUGGCGA----
---------UGGAAAUGG--GGUGCCCCCACCCGUCUUGAAACACGGACCAAGGAGUCAA
-A-CAGACGCGCAA-GGGAGGAGUAUGU------AUGU-----GAGAACUCUUUUCUCGU
ACUGAAAG-GGAGGUGUGAU------UUUACACCCGUGGCGU-GCGCAAUU---------
------------------------------------UCUCU---------UUUU------
-------------------------------UGUGUUUUU-GCCCAACG----CCGGCCG
----------------------GCCC-----------------CCCGUGGG-CU-GCGCG
----------------------CGAGUGUGCCUGUUUG-GACCCGAAAGG-UGGUGAACU
AUGCCUGAACAAGGUGAAGCCCGGGGAAAC-CCCGGUGGAGGCCUGU--AGCGAUGCUGA
CGUGCAAAUCGCUCGUACGAUUUGGGUAUCGGAGCGAAAGACUCAUCGAACCACC-UAGU
AGCUGGUUCACGUCGAAGUUUCCCUCAGGAUAGCUGGUG-CUUG----------------
-------------------------------------------------------UCUUU
AAGAAGUAUUGUGCGGUAAAGCAAAUGAUUAGA-GGCAUUGG-UGU-U-CUUGU-AAUA-
U-CGACCUAUUCUCAAACUUUAAAUGUGCAAACA--------------------------
---------------ACCCA-GCCUUAGU--UAUU--UUAACAAG---------------
----GCUUUUGGG-UACAUAAGA-AU-U--G-----AGGCACCA-AGUGGGC-C-UUCU-
U-CGG-UAAGCGGAGC-AGGCGAUGC-GGAAUG---AACCGCUUAGGG-AUAUGUGGCGU
CAAAACUUGU-GGG-CU-CAUUCUC-GAUACGU-GAAAAGGGUGUUGGUGGAUAGGGACA
GUUGGACGGUGGCCAUGGAAGUCGGCA-UCCGCUAAGGAGUGUGUAACAACUCACCAACC
-----GAAUCCACCGGCCCCGAAAAU-GGAU-GACGCUUA-AGCCCCAUGUGCGUGAUUG
CCCAUUAUUCCUUUGGUGAGGGCGGC----------------------------------
--------------------------------------------UA--------------
---UAUU------UCUUU---------GUGAGA---------------------------
----------------------------------------------AAGUGUAGCCCUCC
CG-AUGUAGACGUGGCGUGGGGG-U-G-AGGAC-GAAGCCGA-U-GGCGCGAGCC--UCG
GAUGGACCCG-CCU-CUAGUGCAGAUCU-UGGUUG-GCGUA-GCAAAG--AUCU-AACGG
AAUAUUUUUUCUUAAAUGCAACGUU-GGA-UACUGGAGCGGGG-AAGGAUUUC-GUGCCA
ACGGCACUCGUACACGAGUUGUUCGG--UCACUGAGCACAACGUU-A-C-ACCGUUUUGU
UAGGAAAGUGAAGGUG-----GUCGGC-GCACUU-CUCCCUUUUU---------UGGGGU
-------------UUGUGUGUUUUACCGGCU----UA-UCUGA-A-AAGGG-GCAACA--
-GAGA---ACC-------------------------------------------------
--------------------------------AC--------UGUGGAAA---UGCG---
-----AA-AC---AC--------------------UUGC-CAGGU-GACCCAUCC-AUCC
-U-CCCACGGUG-AG-C----UUUCU-----U-UUCACC-AUAAUC-CACAU-----C-U
-----CC-----GG----------------CCUU-GCU-G-GGGCUUGGGCCUCUCGACU
UCUCGCGU-UACUCGGAGC-----GGGGGC----UCAAG-AUU-GAA--AA---------
-------------------------------------------------------A--UG
CAGCUCACCCUACGUACUGU-CCUUUGUU-GUGAGUUCGGC-GCAUUAAA-G-CAAAAAC
CUGGGG-----------------------------------------------UGUCCCA
A-CUGCAGACCGUACUCAUCACCGCAUCAGGUC-CCCAAGCA-UCGAAUGCUCUGGU-A-
CAUAGA-GAAAGGUACACUCAGGGAAGUCGGC-AAAAUAGAUGCGUAAGUUCGC-AAGAA
GCAUUG-GCUC-U-GA-GGGCAAA-GUGGGGGU------CCACAG--GAG-GGCCAGUG-
--UCC-UUUCGU--GCGCGGCC----GUUU---------UCUG--CGUUU----------
-------------------------------------------------------UG--U
U-----------------GUUU--------------------------------------
------------------------------------------------------------
-----UGGCGUUCG-------CGCCUU-------------A-------------------
--------------GC--AC------------------------------AUAC------
-------------------------------------GCGG-------------------
-------------------CGACCGUUU---------------------UG-CUCGG---
----AACG--UGAAGG-CUA--CCCU-CCCGAGCC---GUAUCUACUAACCUCC--UUCU
GGUGUGUUGUUUUUACGUCUCA----CUCCCGC-----GCA-------------------
------------------------------------------------------------
------------------GGUG---------------------------------UU---
------------------UUCGCUUCCUUUUU----------------------------
-UGGU-UG----------------------------------------------------
------------------------------------------CG----------------
--------------------CA-----CCU--ACAAAUUGC--CAACUCAGA--ACUGCU
UACGGC--GGGGAAUCCAA-----CUGUAUAAUUAAAACAUAGGUUUGUGAUGCAUCC--
--AA-G------------UGGUGUAUG-UCGCAAACUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAACGUGAC--------------GAGA--------------UUCACCGACGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCUUC-CA
AUUAGAGACGCGCAUGAAUGGAUUAAUGAGA--UUCCCUCUGUCCCGAGU----UAC-UA
UCUAGCGAAACG-ACAGUCAAGGGAACGGACUUGAAGGGCUAAGCGGGGAAAGAAGA-CC
CUGUUGAGU-UUGACUCCAGUCUGGCUCUGUGCGGCGACUUUGGAGGUGUAGUAU-AGGU
GGAAGC-----------------------------------------------GCAA---
------------------------------------------------GC-UC-AAAUGA
AAUA-CCACCACUCGGAACGUUGCUUCACUUAUCG-AA-------U-GAAGAGAC-CAAU
GGUUGUUUU----GCG------CA--GUCU--------UCG---GGCU-G--UGCGCCG-
--UCU-------AG-GCU------GGGCAUAAUU--GUGGUGUUU---------------
-CUUUCACCGC-CACGG------------------GAGGGGUGU--UGGUUUUUUAUCCU
UCUCUCCGUUUCUCCUUU-UCUCUCUUUCU--CCCUUU---------------------U
UUUGGGCGUUUGAGGGUU------------------------GGUGACCCG------UGG
GCG---------------------------CCCAG---CCGUGCGGAACUUCUGCGCCAA
CGGGGUGGGAACUUUUCGUUUCUUCUCCGGAGUCUUGUUUCGAGACAUCUGCCAGAUGGG
GAGUUUGGCUGGGGCGGCAUAUCUGUUA-CACGACAAC-GCAGGUGUCCUAAGGCGAGCU
CAGUGGGAACAGAAAUCUCACGUG-GAACA-CAAGCGUAA-AUGCUUGCUUGAUUAACGA
----------------------------------UUUCCA--GUACGAAUCGAGACUGCG
AAA-GCAAGGCCAG-CGAUCCUUUGCGAAGAACAGGAA---AUAUGAACA----------
----------AAUCAUACCAGAGGUGUCAG-AA--UAAUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AACCUAGCGCCGCAGAAGACGCUAAGGGUUGGAUUGUUCACCCACUGACAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUGGUUUUACCCUACUUGGCUGGAGAUUGCGAG
UAAA-AGAUUAUCCGCGCAAAGCGGAGUGAGAUUGUGAAGGGAUCUCG--CAGGCAUCGU
GAGGGA-AGU-AUGGGGUAGUACGAGAGGAA-CUCCCAUGCCGUGCCUC-UGGUUUCUGG
AGUUUGUC-GAAG-GGCAAG-U-GCUCCGACGCUAUCGCACG-GUGGUUCUCGGCUGAAC
GCC-UC--UAAGCCAGAAACCAGUCCCAAG---ACCGGGUGCC-CGUUCUCGAAU-----
---------------------------CGCCACUUCUCUUAUC-----------------
---------------------------------------------------------UGG
UGG------------GCUCU----------------------------GC--CC--GCCC
U---------UGUCGGCGCC-----------------------------CAGU-------
----------------ACCUUCAUUUU----CAC--------------------------
------------------------AAGAUCUUUUG--------------------UCCCU
CUCC-----AAA----CGAGAGUACAUGCAUGGGCU-GGCAUGAGCGGCACGCUCCAC-G
ACCGUGGGGCUCGAGGGGCACU----------UUA--CGUCCCGAGGCGCUGAACCUUGA
UGCUUGGAAUUUC-AUGCUCAGG-----------
>Yarrowia_lipolytica
-----------A--UAACUAUCAAC-AACGGAUC-UCUUGGC-UCUC-A---CAUCGAUG
AAGAACGCAG-CGAACCGCGAUAUUUUUUGUGACU--U---GCA--GAU-----GUGAAU
CAUC-AAUCUUUGAACGCACAU-UGC---GC----GGUAU-GG---------CAUU----
-----CC---G----U----A---CCGC-A-CGGA-UGG---AGGAGCGUGUU-------
------------------------------UUCAC-CUCC-UU-CAU-C-CG-AGAUUAC
CCGCUGAACUUAAGCAUAUCAAUAAGCG--GAGGAAAAGAAACCAA-CAGGGAUUGCCUC
AGU-AA-CGGCGAGUGAAGCGGCA-A-AA-GCUCAAAUUUGAAACCCUCG----------
--------------GGAUUGUAAUU--UG----------AA-GAUUUGG------C----
---------------------AUUGGAGA-----------A----A-------GCUAA--
CCC-------AAGUUG-CUUG---------------------------------------
----GAAUA-GUACG-------UCAUAGAGGGUGACAACCCCGUC---------UGG---
C--UAACCG---UU--CUCCA-UGUA----------------UUGCCUUAUCAAAGAGUC
GAGUUGUUUG---GGAAUGCAGCUCAAA-G-UGGGUGGUAAA-CUCCAUCUAAAGCUAAA
UACUGG--U-GAGAGACCGAUAGC-GAAC-A-AGUACUGUGAAGGAAAG-GUGAAA-AGA
AC-UUUGA-AAAGAG-A-GUGAAAUAGUAUGUGAAAUUGUUGAUAGG--G-AAGGA-AAU
G---AGUG-GAGAGUGGC------------------------CGAGG-------------
------------------------------------------------------------
------------------UUU---------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------C-------------------AG--CCGCCC-CU---
------------------------------------------------------------
------CG----UG-------GG-------------------------------------
--------CG------------------------GUG-U---------------------
------ACUG--------------------------------CCGA--------------
----------CGCCGA--------------------GUCAUC--GAUAG-CGA----GAC
--------GAGGGUU---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------AC-----------------AAA----------------
------------------------------------------------U-----------
-----------------------GGGA---------------------------------
------------------------------------------------------------
-GCG----CCU-----------------UUCG-----GGC--------------------
----------GUUCUCCCC-UAA------------------------------------C
CCUC--------------------------------------CACACUGCCACCGA----
--------CGACAUAAUC--CACCAUUUCACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-UGGAUAUGUGA-GUGUUAGGGU--------GGCAA--------ACCCCAG--CGCGC
AAUGAAAG-UGAAUG----------------------GAUUC------------------
----------------------------------------------------G-------
-------------------------------UUCAGAAUC-GACCGAAC----UU-GAU-
----------------------UAUUA-----------------UGACAGUUUU-GAGUA
----------------------A-A-CACAUCCAUUGG-GACCCGAAAGA-UGGUGAACU
AUGCCUGGAUAGGGUGAAGUCAGAGGAAAC-UCUGAUGGAGGCUCGU--AGCGGUUCUGA
CGUGCAAAUCGAUCGUAGGAUCUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUC-UAGU
AGCUGGUUCCUGCCGAAGUUUCCCUCAGGAUAGCAGAAG-CUCA----------------
------------------------------------------------------------
UAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGA-AGUAUUGG-GGG-C-GAAAU-GCCC-
U-CGGCUUAUUCUCAAACUUUAAAUAUGUAAGAA--------------------------
---------------GCCUU-GGUUA-CU--UAAU--C--GAA-----------------
----CC---GUGG-C---UACGA-AU-G--AA----GAGCUUCU-AGUGGGC-C-AUUU-
U-UGG-UAAGCAGAAC-UGGCGAUGC-GGGAUG---AACCGAACGUGG-AGUUAAGGUGC
CGGAAU--AC-ACG-CU-CA---UC-AGACACC-ACAAAAGGUGUUAGUUUAUCUAGACA
GCCGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUCACAACUCACCGGCC
-----GAAUGAACUAGCCCUGAAAAU-GGAU-GGCGCUUA-AGCGUGU----------UA
CCUAU-ACUCUACCGAGAGGAG--------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------GUUUCCUC
UC-GAGUAGGCAGGC-GUGGGGG-U-U-GUUGA-GAAGCGUU-G-GCCGAGAAGC--U-G
CGUCGAACGG-CCC-CUAGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAAUG
A--G---------------AACUUU-GAA-GACUGAAGUGGGG-AAAGGUUCC-GUGUGA
ACAGCAGUUGGACACGGGUAAGUCGA--UC-CUAAGGGGUGGCAU-A-A-CUGU----CG
CGUAC--------G-------GCC-----CGA----------------------------
--------------UAAGGGC-------CUU----CU-CC-AA-A-AGGGA-AGCCGGUU
-GAAA-UUCCGGCACUUGGA---UGUG------GAU--------UCU-------------
-------------------------------------------CCA-CGG---CAAC---
-----GU-AA---CU--------------------GAAU-GUGGG-GACGGUGGCACAAG
UC-UUGGAAGGA-GU------UAUCU-----U-UUCUUU-UUAACG-GAGUC-----A-A
-----CA-----CC----------------CUGG-AAU-U-AG-----------------
---UUUGU-CUAGAGAUAG-----GGUAUC-----GUUC-CGG-AAG--AG---------
------------------------------------------------------------
-GGGGGCAGCUUUGUCCCCU-CCGAUGCA-CUUGUGACGCC-CCUUGAAA-A-CCCGCAG
GAAGGA---------------------------------------------AUAGUUUUC
A-CGCCAAGUCGUACUGAUAACCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUAGU-U-
GAUAGA-AUAAUGUAG-AUAAGGGAAGUCGGC-AAAAUAGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-GG--GGGUUG-G-UGGAUG------GAAG----CGU----------
---------GGGAG-ACCCCAAG---GG-----------ACUG-----------------
-----------------------------------------------------------G
CA-----------------GCU--------------------------------------
------------------------------------------------------------
-------GG-----------GCAACU--------------G-------------------
--------------GC--AG----------------------------------------
-------------------------------------CCGG-------------------
------------------------------------------------------------
----------------------ACCC-GC-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------GGCA--------------------------------------
---------------------------------------------------------GAC
ACUG---C--------------------------------GU------------------
------------------------------------------CG----------------
-------CU-----------CCGUCC-ACA---UCAUCAAC--CGCCCCAGA--ACUGGU
ACGGACAAGGGGAAUCUGA-----CUGUCUAAUUAAAACAUAGCUUUGCGAUGGUUGU--
--AA-A------------ACAAUGUUG-ACGCAAAGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAACCAAGCGCGC
GGGUAAAC-GGCGGGAGUAACUAU-GCUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUUAACGAGA--UUCCCACUGUCCCUAUC----UAC-UA
UGUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUUUGACAUUGUGAAGAGACAUAGGGGGUGUAGAAU-AAGU
GGGAGC-----------------------------------------------UUCG---
------------------------------------------------GC-GC-CGGUGA
AAUA-CCACUACCCUUAUCGUUUCUUUACUUAUUU-AG-------U-AA-GUGGA-----
-A-----------GU-------GG--UUUA--------ACA---ACCA-U--U--UUCU-
-------------------------AGCA-------------------------------
-------UU---------------------------------------------------
--------------------CC----------UU--------------------------
------------------------------------------------------------
------------------------------UCCA----GG--------------------
--------------------------------------CUGAAGACA-UUGUCAGGUGGG
GAGUUUGGCUGGGGCGGCACAUCUGUUA-AAAGAUAAC-GCAGAUGUCCUAAGGGGGACU
CAAUGAGAACAGAAAUCUCAUGUA-GAACA-AAAGGGUAA-AAGUCCCCUUGAUU-UUGA
----------------------------------UUUUCA--GUGUGAAUACAAACCAUG
AAA-GUGUGGCCUAUCGAUCCUUU-----------AGU---UGUUCGGAG----------
----------UUUGAACCUAGAGGUGCCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCAGUCAAGCGUUCAUAGCGACAUUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------GA----CUUGUUGC
AAUAGU-AAU-UGAACUUAGUACGAGAGGAA-CAGUUCAUUCGGAUAAU-UGGUGUUUGC
UGCUGUCU-GACC-AGGCAA-U-GCAGCGAAGC-ACCACCCG-CUGGGUUAUGGCCGAAC
GCC-UC--CAAGUCAGAACCCAUGCCAGA----AGGGAAGAAU-CAGGGGGAAGG-----
-------------------------------------AGGGAUAUGA-------------
---------------------------------------------------------AGA
------------------------------------------------AG--UA--CC--
------------GCAGUACCGGA--------------------GGGGG-AGGG-----GG
G--GUGGAUAAGGAAACCGCCCGCCCC----CCCCCG------------------ACU--
--------GGA----------------AAGACCC---------------------ACCCU
UGUG-----AAA----UCCAUUGUAGACGACUUUAG-UAUGCGACGAGGUAUUGUAAG-U
AGUA--------GAGUAGC-CU----------UGU--UGUUACGAUCUAUUGAGAUUAAG
CCUUUGUUGUUUA-GAUUCG--A-----------
>Xenopus_laevis
---------UCG--CGACUCUUAGC-GGUGGAUC-ACUCGGC-UCGU-G---CGUCGAUG
AAGAACGCAG-CUAGCUGCGAGAAUUAGUGUGAAU--U---GCA--GGACA--CAUUGAU
CAUCGACACUUCGAACGCACCU-UGC---GG----CCCCG-GGU---------UCC----
----UCC---C----G----G---GGCC-A-CGCC-UGU---CUGAGGGUCGCUC-----
----------------------------CUCAGAC-CUCA-GAUCAG-A-CG-CGGCGAC
CCGCUGAAUUUAAGCAUAUUACUAAGCG--GAGGAAAAGAAACUAA-CCAGGAUUCCCCC
AGU-AA-CGGCGAGUGAAGAGGGA-A-GA-GCCCAGCGCCGAAUCCCGCGCCCGC-----
CGGG---CGC--GGGACGUGUGGCG--UA----------CG-GGAGACCGGACCCC----
---------------------CCCGGCGC-----------GG---CUC-----GGGGG--
CCC-------AAGUCC-UUCU---------------------------------------
----GAUCG-AGGCCC---AGCCCGCGGACGGUGUUAGGCCGGUG---------GGC---
GG-CCCCCG---GC--GCGGC-GGGA----------------CCCGGUCUCCUCGGAGUC
GGGUUGUUUG---GGAAUGCAGCCCAAA-G-CGGGUGGUAAA-CUCCAUCUAAGGCUAAA
UACCGG--C-ACGAGACCGAUAGC-GGAC-A-AGUACCGUAAGG-AAAG-UUGAAA-AGA
AC-UUUGA-AGAGAG-A-GUUCAAGAGGGCGUGAAACCGUUAAGAGG--U-AAACG-GGU
G---GGGC-CGU-GCGGU-------------------CCGCCCGGAG--GAUUCAACCC-
-GGCGGGUCAGCGCCGCCGGGAC-CGG----------------------------GCCAC
UCGG-CGG-ACCCC----CCCGCCG---------------GCCC----------CCU---
----CCCC--------UCGCCGG-------------------G-AGGGCGGU--------
-----------CGC--GCGG--------GGGGGACG-----------------CGGCCCG
--GGCG--------CCCGGCGCC-----GCG-----UUUCC---UCCG-CG--GCGGU--
------GCGC--GCGCCGGCUC--C-------------------GG------GC-CG---
---C------GU------------------GGGAAGGCC----------------CAGG-
------GGUUCAGG-------GGA------------------------AGGU--------
------GGCC------------------------GGC-CGCC--CCC----------GCG
C-----GCGG-----CU---------------------ACAGCCCC--------------
---------CCCCC---------------------AGCAGCAGCACUCG-CCGU--CGCC
--------CGGGGCCGAGGGA----GACGCCGGCC----------------UCCGCGGUC
CUCCUCCC--------CGGAGCGCG------------------UCCCGCCG---------
------------------------------CUCCCCCC----------------------
-------------CG-GGGGGG---------------------------------CGGCG
CGCG---GGG----------CGG------------------GGAA---------------
------------------------------------------------GGGGGA----AG
GGGCC-------CCCCGCUCCCGGCGC-------GGCUGU-C------------------
--------------------------------------------------AACC---G-G
GGCG----GACUGCC-------------CCCAGUG--CGC-CCC---GU-----CCG-CG
CC--------GCGCCGCC--GAG---GCGGG---AG--------GGC----------CGC
CG----------------------------------GGAGCCGCCAGGGUCCGCGG----
--------CGAUGUCGGU--GUCCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUA
-A-CGCGCGCGCGA-GUCGGAGGGACU------CUGCG------CGAAACCCUGUGGCGC
AAUGAAGG-UGAGGGCCGGGGCG----CCCCGGCUGAGGUGG-GAUCCCGCCGCCCCUC-
--CCUCCGCCCCCCCGGGGGCG-GGG---GGGGGGCGCCGG---------CGG-------
-------------------------------GCCACCACC-GGCCCGUC----UCGCCCG
-C--------------------CCCG----------------UCGGGGGGU-GG-GCGUG
----------------------AGCGCGCGCG-AUUAG-GACCCGAAAGA-UGGUGAACU
AUGCCUGGGCA-GGCGAAGCCAGAGGAAAC-UCUGGUGGAGGUCCGU--AGCGGUCCUGA
CGUGCAAAUCGGUCGUCCGACCU-GGUAUAGGGGCGAAAGACGAAUCGAACCAUC-UAGU
AGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCG-CUGU----------------
---------------------------------------------------------CCG
UCGCAGUUUUAUCCGGUAAAGCGAAUGAUUAGA-GGUCUUGG-GGC-CGAA-AUCGAUC-
U-CAACCUAUUCUCAAACUUUAAAUGGGUAAGAA--------------------------
---------------GCCCG-GCUCG-CU--GGCU--U--GGA-----------------
----GC---CGGGGC---GUGGA-AU-G--CG----GCACGCCAUAGUGGGC-C-ACUU-
U-UGG-UAAGCAGAAC-UGGCGCUGC-GGGAUG---AACCGAACGCCG-GGUUAAGGCGC
CCGAUG--CCGACG-CU-CA---UC-AGACCCC-AGAAAAGGUGUUGGUUGAUAUAGACA
GCAGGACGGUGGCCAUGGAAGUCGGAA-UCCGCUAAGGAGUGUGUAACAACUCACCUGCC
-----GAAUCAACUAGCCCUGAAAAU-GGAU-GGCGCUGG-AGCGUCG----------GG
CCCAU-ACCCGGCCGUCGCCGGCGCUGGGU------------------------------
--------------------------------------------CA--------------
----GUC------CGC--------------------------------------------
---------------------------------------------GGGGGCUAGGCCGCG
ACUGAGUAGGAGGGCCCCGGCGG-U-GGGCGCG-GAAGCGC--G-CGCGAGGGCC--C-G
GGUGGAGCCG-CCG-CGGGUGCAGAUCU-UGGUGG-UAGUA-GCAAAU--AUUC-AAACG
A--G---------------AACUUU-GAA-GGCCGAAGUGGAG-AAGGGUUCC-AUGUGA
ACAGCAGUUGAACAUGGGUCAGUCGG--UC-CUAAGAGAUGGGCG-A-G-CGCC----GU
UCGGA--------AGGGACGGGCG----AUGG---CCUC-----------------CGU-
--------------CGCCCUC------GGCC----GA-UC-GA-A-AGGGA-GUCGGGUU
-CAGA-UCCCCGAACCCGGAGUGGCG---------GAGACGGGCGCCCGCGGCCCCCCCC
GACGCCUCGCGGCGGCGGGGGGGCGGGGGCGUCC--------AGUG-CGG---CGAC---
-----GC-GA---CC--------------------GAUC-CCGGA-GAAGCCGGGGGAGC
CC-GGGAGAAGA-GU------UCUCU-----U-UUCUUU-GUGAAG-GGCAG-----G-G
-----CC-----GC----------------CCUG-AAU-G-GG-----------------
---UUCGC-CCCGAGAGAG-----GGGCCC----GCGCCGUUG-GAA--AG---------
-----------------------------------------------------------C
GUCGCGGUUCCGGCGGCGUC-CGGUGAGC-UUCUCGCUGGC-CCUUGAAA-A-UCCGGGG
GAGAGG-------------------------------------------GUGUAAAUCUC
UGCGCCGGGCCGUACCCAUAUCCGCAGCAGGUC-UCCAAGGU-GAACAGCCUCUGGCAU-
GUUAGA-ACAAUGUAG-GUAAGGGAAGUCGGC-AAGUCAGAUCCGUAACUUCGG-GAUAA
GGAUUG-GCUC-U-AA--GGGCUG-GGUCGGUC------GGGCUG--GGG-CGCGAA-GC
--GGG-GCUGGGC-CGCGCCGCG---GCUGGACGAAGGCGCCC--CCGUG-GCGCU----
----------------CUU----------------UCCCU-----------CCUCCCG-C
CCCCCUCU----------CUCUC--CGG--------------------------------
------------------------------------------------------------
-----CCCCCCCUC------GCGGGG--------------GGC-------CG--------
-------------CGG--GGG----------------------------CGGGGG-----
--G--GC------------------------------GCGG--GG----GG---------
----CCG-----------GGAGC-GCC----------------------CG-G-CGGCGG
CGACUCUGGACGCGCG-CCGG-GCCCUUC-------------------------------
------CUG----UGGAUCGC-----CC-CAGCUGCG-GCGCGCGCCUCU-CCC------
---------CCGCG-----CCGUC-----------------------------CCCCUCC
------------------UGCG------------------------------------CC
------------------UCCCC--CCGUCA--------------------------GGG
GACG---G-----------------------GGCGC----GGCG----------------
------------CGGGGCGG----------CCGGG-------GC----------------
-----GGGCCCGGCCU----CGGCCG-GCG--CCUAGCAGC--UGACUUAGA--ACUGGU
GCGGAC--AGGGAAUCCGA-----CUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCG--
--AG-G------------CGGGUGUUG-ACGCGAUGUGA-UUUCUGCCCAGUGCUCUG-A
AUGUCAAAGUGAA--------------GAAA--------------UUCAAUGAAGCGC--
GGGUAAAC-GGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUC-UA
AUUAGUGACGCGCAUGAAUGGAUGAACGAGA--UUCCCACUGUCCCUACC----UAC-UA
UCUAGCGAAACC-ACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGA-CC
CUGUUGAGC-UUGACUCUAGUCUGCAACUGUGAAGAGACAUGAGAGGUGUAGGAU-AAGU
GGGAGGCCCCC-----------------------GCGCUCGUC----------GCAA-A-
------------------------------------------GGGGCGCC-GC-CGGUGA
AAUA-CCACUACUCUUAUCGUUUUUUCACUUACCC-GG-------U-GAGGCGGG-----
-G-----------GC-------GA--GCCC--------CGAG-GGGCU-CU-CGCUUCU-
-------------------------GGAC-------------------------------
-------CCAA--GCGC-------------------------------------------
--------------------CG----------GCCC------------------------
CCGCGC-----CGG----------------------------------GCG------CGA
------------------------------CCCG----CU--------------------
--------------------------------------CCGAGGACA-GUGGCAGGUGGG
GAGUUUGACUGGGGCGGUACACCUGUCA-AACCGUAAC-GCAGGUGUCCUAAGGCGAGCU
CAGGGAGCACAGAAACCUCCCGUG-GAGCA-GAAGGGCAA-AAGCUCGCUUGAUC-UUGA
----------------------------------UUUUCA--GUAUGAAUACAGACCGUG
AAACGCGGGGCCUCACGAUCCUUC-----------UGA---CUUUUUGGG----------
----------UUUUAAGCAGGAGGUGUCAG-AA--AAGUUACCACAGGG-AUAACUGGCU
UGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCU
AUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGA
GCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACU-----------------
---G-AUG--------------------------------------AU--GUGUUGUCGC
AAUAGU-AAU-CCUGCUCAGUACGAGAGGAA-CCGCAGGUUCAGACAUU-UGGUGUAUGU
GCUUGGCU-GAGG-AGCCAA-U-GGGGCGAAGCUACCAUCUG-UGGGAUUAUGACUGAAC
GCC-UC--UAAGUCAGAAUCCCCCCUAA-----ACGUGACGAUACCGCAGCGCCG-----
---------------------------CGGAGCCUCGGUCGGCCUCG----------GAU
---------------------U-----------------------------------AGC
CGG------------CGCCCC--------------------CCCCG--GG--GG--GC--
-----------GCCGGCGGGCAG---AGCCGCUCGC--CUC--GGGAC-CGGA-----GC
G--CGGACGAAAGGGGG--CCGCCUCU----CUCCCGGAGCGC-----ACCGCACGUU--
--------CG-----------------UGGGGAA---------------------CCUGG
UGCU-----AAA----UCAUUCGUAGACGACCUGAU-UCUGGGUCAGGGUUUCGUGCG-U
AGCA--------GAGCAGC-UA----------CCU--CGCUGCGAUCUAUUGAAAGUCAU
CCCUUGGCCAAGC-UUUUGU--C-----------
